View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18440_low_12 (Length: 349)
Name: NF18440_low_12
Description: NF18440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18440_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 28814350 - 28814160
Alignment:
| Q |
1 |
agcaggctaccaaccctcttaaggacacagaatcatatgtgcctacattctcgttttctcctaattacttttcttacaaatcatatgattcacttccact |
100 |
Q |
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| T |
28814350 |
agcaggctaccaaccctcttaaggacacaggatcatatgtgcctacattctcgttctctcctaattacttttcttaca-------tgattcacttccact |
28814258 |
T |
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| Q |
101 |
aatgtcttttgtgtgcttaacaaaacaaacactcacttttgcatataataaaataaatataccattttcatcatccacatgcaaatttatcacttttt |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28814257 |
aatgtcttttgtgtgcttaacaaaacaaacactcacttttgcatataataaaataaatataccattttcatcatccacatgcaaatttaccacttttt |
28814160 |
T |
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