View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18444_high_17 (Length: 390)

Name: NF18444_high_17
Description: NF18444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18444_high_17
NF18444_high_17
[»] chr5 (34 HSPs)
chr5 (19-375)||(26183322-26183678)
chr5 (19-244)||(17920871-17921096)
chr5 (19-246)||(7898002-7898229)
chr5 (19-241)||(20498241-20498464)
chr5 (72-246)||(20286650-20286825)
chr5 (19-120)||(20845882-20845983)
chr5 (19-120)||(22130922-22131022)
chr5 (19-120)||(20741024-20741125)
chr5 (31-111)||(11204702-11204781)
chr5 (19-120)||(13942085-13942187)
chr5 (19-109)||(30605778-30605869)
chr5 (24-120)||(22184690-22184786)
chr5 (19-103)||(26036797-26036882)
chr5 (19-109)||(13338573-13338663)
chr5 (19-120)||(13735061-13735163)
chr5 (22-103)||(17661501-17661583)
chr5 (19-120)||(22404849-22404951)
chr5 (18-99)||(24117586-24117668)
chr5 (33-100)||(24394622-24394690)
chr5 (19-121)||(9522505-9522607)
chr5 (19-109)||(24189843-24189934)
chr5 (19-109)||(25105508-25105599)
chr5 (19-109)||(25164601-25164692)
chr5 (19-109)||(26329301-26329392)
chr5 (19-103)||(18221097-18221182)
chr5 (19-103)||(20714824-20714909)
chr5 (19-103)||(23420649-23420734)
chr5 (33-100)||(15116782-15116850)
chr5 (22-99)||(22979736-22979813)
chr5 (19-58)||(22246439-22246478)
chr5 (19-74)||(23623894-23623949)
chr5 (19-100)||(11756292-11756373)
chr5 (19-52)||(22252129-22252162)
chr5 (33-100)||(19663578-19663646)
[»] chr7 (68 HSPs)
chr7 (19-246)||(3290771-3290999)
chr7 (19-246)||(14984518-14984743)
chr7 (19-246)||(15414129-15414354)
chr7 (19-246)||(48797705-48797934)
chr7 (19-246)||(7619925-7620152)
chr7 (19-246)||(14975277-14975504)
chr7 (19-246)||(15404753-15404980)
chr7 (19-246)||(30225926-30226157)
chr7 (19-120)||(9564227-9564327)
chr7 (19-103)||(13455199-13455283)
chr7 (19-246)||(42782594-42782827)
chr7 (19-110)||(4794676-4794766)
chr7 (19-120)||(9566876-9566976)
chr7 (19-246)||(11628477-11628711)
chr7 (19-244)||(11560592-11560829)
chr7 (19-102)||(15436037-15436120)
chr7 (19-101)||(23174967-23175050)
chr7 (19-120)||(26133001-26133103)
chr7 (31-100)||(2076496-2076565)
chr7 (31-100)||(2082915-2082984)
chr7 (19-111)||(15506247-15506339)
chr7 (19-120)||(10658353-10658455)
chr7 (19-103)||(20991529-20991614)
chr7 (18-101)||(24813914-24813998)
chr7 (19-121)||(15708141-15708243)
chr7 (19-74)||(16207968-16208023)
chr7 (23-117)||(23057179-23057274)
chr7 (19-120)||(7586617-7586718)
chr7 (26-101)||(31269148-31269224)
chr7 (19-74)||(4458756-4458811)
chr7 (19-109)||(11588445-11588536)
chr7 (19-109)||(16436755-16436846)
chr7 (19-120)||(11521497-11521599)
chr7 (19-116)||(14926621-14926719)
chr7 (19-116)||(15350087-15350185)
chr7 (19-120)||(23956847-23956949)
chr7 (19-120)||(42636217-42636319)
chr7 (19-120)||(24902078-24902178)
chr7 (19-101)||(26195544-26195626)
chr7 (19-74)||(29546224-29546279)
chr7 (19-100)||(645123-645205)
chr7 (19-99)||(7508426-7508507)
chr7 (19-99)||(10251431-10251512)
chr7 (19-115)||(21260490-21260587)
chr7 (39-103)||(4547853-4547917)
chr7 (19-74)||(9894153-9894208)
chr7 (34-100)||(10260231-10260298)
chr7 (19-74)||(10279832-10279886)
chr7 (39-100)||(12505697-12505760)
chr7 (26-100)||(20596918-20596993)
chr7 (19-74)||(23082860-23082915)
chr7 (19-72)||(6045340-6045392)
chr7 (33-101)||(9732836-9732905)
chr7 (19-99)||(23580040-23580121)
chr7 (26-74)||(10309583-10309631)
chr7 (39-100)||(12484267-12484330)
chr7 (25-99)||(14687358-14687433)
chr7 (19-103)||(11998866-11998951)
chr7 (25-71)||(20588800-20588846)
chr7 (33-101)||(2392878-2392947)
chr7 (28-120)||(19353101-19353193)
chr7 (33-101)||(21546902-21546971)
chr7 (55-120)||(24049508-24049572)
chr7 (19-59)||(12325845-12325885)
chr7 (19-63)||(14165193-14165237)
chr7 (23-74)||(11407040-11407091)
chr7 (33-97)||(5299140-5299205)
chr7 (193-246)||(24049373-24049426)
[»] chr4 (43 HSPs)
chr4 (19-246)||(24142978-24143206)
chr4 (26-246)||(25354730-25354951)
chr4 (19-243)||(23541091-23541315)
chr4 (19-241)||(22554818-22555041)
chr4 (26-246)||(19894898-19895118)
chr4 (19-244)||(46741837-46742062)
chr4 (19-241)||(11325233-11325456)
chr4 (19-103)||(21478095-21478179)
chr4 (19-120)||(11905065-11905165)
chr4 (19-116)||(13399391-13399489)
chr4 (19-103)||(10190873-10190958)
chr4 (19-109)||(15700398-15700490)
chr4 (19-109)||(8163763-8163857)
chr4 (19-73)||(18618204-18618258)
chr4 (19-124)||(50907817-50907923)
chr4 (19-102)||(9068933-9069017)
chr4 (33-120)||(13268816-13268904)
chr4 (19-74)||(16383907-16383962)
chr4 (19-108)||(10724241-10724331)
chr4 (19-108)||(10938010-10938100)
chr4 (19-120)||(28019274-28019376)
chr4 (19-120)||(33745933-33746035)
chr4 (24-100)||(33737973-33738050)
chr4 (33-100)||(11865215-11865283)
chr4 (19-103)||(25116810-25116897)
chr4 (19-120)||(10721954-10722055)
chr4 (19-120)||(10935723-10935824)
chr4 (19-111)||(32861626-32861719)
chr4 (19-102)||(15162575-15162659)
chr4 (33-100)||(24608696-24608764)
chr4 (19-66)||(19659463-19659510)
chr4 (19-62)||(23400282-23400325)
chr4 (19-120)||(41785404-41785506)
chr4 (19-99)||(10198338-10198418)
chr4 (33-93)||(17871604-17871665)
chr4 (23-103)||(33899080-33899161)
chr4 (32-119)||(11289438-11289525)
chr4 (22-100)||(2679839-2679918)
chr4 (19-74)||(16655426-16655481)
chr4 (33-103)||(13875961-13876031)
chr4 (143-246)||(11904927-11905031)
chr4 (28-60)||(19183777-19183809)
chr4 (33-100)||(19564825-19564893)
[»] chr8 (31 HSPs)
chr8 (19-246)||(39080810-39081037)
chr8 (19-246)||(37155613-37155841)
chr8 (26-246)||(17279730-17279953)
chr8 (19-247)||(17880826-17881057)
chr8 (19-120)||(33466247-33466348)
chr8 (19-120)||(23249705-23249806)
chr8 (19-120)||(1683948-1684047)
chr8 (19-82)||(8726853-8726916)
chr8 (19-74)||(12814679-12814734)
chr8 (19-109)||(24091938-24092029)
chr8 (22-101)||(1562457-1562537)
chr8 (19-121)||(23864554-23864657)
chr8 (26-120)||(45133634-45133729)
chr8 (19-103)||(24850519-24850603)
chr8 (19-103)||(33977045-33977130)
chr8 (19-74)||(22476247-22476302)
chr8 (19-70)||(24384582-24384633)
chr8 (19-120)||(9996469-9996571)
chr8 (19-103)||(23541498-23541583)
chr8 (19-103)||(33961748-33961833)
chr8 (33-100)||(24482308-24482376)
chr8 (24-117)||(12240211-12240305)
chr8 (19-120)||(20254970-20255072)
chr8 (19-120)||(25240375-25240477)
chr8 (38-109)||(11221373-11221445)
chr8 (19-63)||(22874206-22874250)
chr8 (97-179)||(8726772-8726854)
chr8 (19-74)||(13660458-13660513)
chr8 (19-74)||(13719101-13719156)
chr8 (21-99)||(18753875-18753954)
chr8 (33-102)||(32179295-32179365)
[»] chr3 (51 HSPs)
chr3 (19-246)||(9031468-9031695)
chr3 (19-248)||(9036550-9036779)
chr3 (19-246)||(8748884-8749111)
chr3 (19-109)||(13913773-13913862)
chr3 (19-109)||(13917825-13917914)
chr3 (17-103)||(20748249-20748334)
chr3 (19-110)||(7479224-7479314)
chr3 (19-109)||(295441-295532)
chr3 (20-102)||(11656010-11656092)
chr3 (19-120)||(18476901-18477001)
chr3 (19-121)||(7496015-7496116)
chr3 (19-120)||(8224810-8224911)
chr3 (19-120)||(18034982-18035084)
chr3 (19-120)||(12054535-12054635)
chr3 (19-103)||(15635960-15636045)
chr3 (19-103)||(17702393-17702478)
chr3 (19-120)||(18064292-18064394)
chr3 (19-119)||(6580953-6581054)
chr3 (19-103)||(13790666-13790751)
chr3 (19-111)||(15686244-15686337)
chr3 (19-103)||(18547635-18547720)
chr3 (19-103)||(28051123-28051208)
chr3 (34-101)||(10082375-10082443)
chr3 (19-110)||(11558405-11558496)
chr3 (19-110)||(11567674-11567765)
chr3 (33-101)||(10189299-10189368)
chr3 (19-102)||(17042840-17042924)
chr3 (19-74)||(19531970-19532025)
chr3 (19-99)||(3552300-3552381)
chr3 (19-103)||(24195511-24195595)
chr3 (33-100)||(8531382-8531450)
chr3 (19-103)||(13524768-13524852)
chr3 (19-62)||(19633915-19633958)
chr3 (19-74)||(21094788-21094842)
chr3 (20-74)||(980452-980506)
chr3 (19-61)||(21719012-21719054)
chr3 (25-101)||(14406722-14406799)
chr3 (33-89)||(20976090-20976147)
chr3 (19-103)||(23954644-23954729)
chr3 (19-99)||(31649682-31649762)
chr3 (33-100)||(8147641-8147709)
chr3 (51-101)||(42243780-42243831)
chr3 (19-108)||(286979-287069)
chr3 (19-103)||(44452467-44452552)
chr3 (215-246)||(11558606-11558637)
chr3 (215-246)||(11567875-11567906)
chr3 (39-100)||(43902141-43902202)
chr3 (33-101)||(15962262-15962330)
chr3 (58-95)||(40199885-40199922)
chr3 (19-63)||(1919323-1919367)
chr3 (33-100)||(19584010-19584078)
[»] chr1 (30 HSPs)
chr1 (19-248)||(45599416-45599645)
chr1 (19-246)||(40313310-40313537)
chr1 (19-246)||(52436907-52437135)
chr1 (19-249)||(33062218-33062457)
chr1 (19-102)||(17038236-17038318)
chr1 (19-120)||(23478021-23478123)
chr1 (161-246)||(17011924-17012009)
chr1 (19-117)||(15804197-15804296)
chr1 (19-99)||(17379709-17379790)
chr1 (19-103)||(4246022-4246107)
chr1 (19-80)||(17012013-17012074)
chr1 (19-103)||(26972487-26972572)
chr1 (19-120)||(14745869-14745971)
chr1 (28-121)||(18390200-18390294)
chr1 (19-99)||(17355917-17355998)
chr1 (33-101)||(49086692-49086761)
chr1 (19-74)||(11667949-11668004)
chr1 (19-109)||(17851459-17851550)
chr1 (19-120)||(10340243-10340345)
chr1 (19-120)||(12753031-12753133)
chr1 (19-103)||(1973300-1973385)
chr1 (31-100)||(20859641-20859711)
chr1 (19-120)||(47941426-47941527)
chr1 (22-117)||(41330891-41330987)
chr1 (19-62)||(20841351-20841394)
chr1 (19-70)||(51472179-51472230)
chr1 (33-93)||(50057518-50057579)
chr1 (19-63)||(13165422-13165466)
chr1 (18-99)||(8281911-8281993)
chr1 (33-101)||(23600515-23600584)
[»] chr6 (53 HSPs)
chr6 (19-249)||(16137669-16137899)
chr6 (19-246)||(19215798-19216024)
chr6 (19-242)||(15038194-15038419)
chr6 (19-109)||(20558283-20558373)
chr6 (19-120)||(15003250-15003351)
chr6 (19-120)||(16309445-16309545)
chr6 (19-115)||(9384589-9384685)
chr6 (19-120)||(20003107-20003208)
chr6 (19-120)||(28623499-28623600)
chr6 (19-120)||(15007424-15007524)
chr6 (19-109)||(34657239-34657329)
chr6 (19-103)||(15897761-15897846)
chr6 (19-246)||(12444807-12445040)
chr6 (19-120)||(26965658-26965760)
chr6 (19-120)||(33665763-33665865)
chr6 (19-111)||(21323361-21323453)
chr6 (19-102)||(24501812-24501896)
chr6 (19-74)||(9281796-9281851)
chr6 (19-120)||(20989852-20989954)
chr6 (27-108)||(25782793-25782875)
chr6 (19-103)||(14258897-14258982)
chr6 (19-103)||(17855181-17855266)
chr6 (19-103)||(20470290-20470375)
chr6 (19-103)||(23882781-23882866)
chr6 (19-74)||(13195340-13195395)
chr6 (19-74)||(25805470-25805525)
chr6 (39-100)||(22885243-22885305)
chr6 (19-102)||(17864512-17864596)
chr6 (148-246)||(15003391-15003490)
chr6 (148-246)||(15035086-15035184)
chr6 (19-109)||(17527972-17528063)
chr6 (19-97)||(20765081-20765160)
chr6 (39-100)||(3904773-3904834)
chr6 (19-103)||(17234578-17234663)
chr6 (19-59)||(13870453-13870493)
chr6 (19-67)||(21723496-21723543)
chr6 (19-63)||(25964722-25964766)
chr6 (19-63)||(25969369-25969413)
chr6 (19-63)||(25973809-25973853)
chr6 (143-248)||(32449092-32449199)
chr6 (19-74)||(12039769-12039824)
chr6 (22-120)||(18152796-18152895)
chr6 (39-100)||(22903201-22903263)
chr6 (33-101)||(12464156-12464225)
chr6 (19-103)||(29255003-29255087)
chr6 (33-100)||(3357097-3357165)
chr6 (33-92)||(13553349-13553409)
chr6 (19-74)||(30424952-30425007)
chr6 (19-70)||(32449271-32449322)
chr6 (39-96)||(1103417-1103474)
chr6 (204-246)||(20002972-20003014)
chr6 (39-100)||(22918046-22918108)
chr6 (41-101)||(16176583-16176644)
[»] scaffold0328 (1 HSPs)
scaffold0328 (19-246)||(17060-17288)
[»] scaffold0064 (1 HSPs)
scaffold0064 (19-119)||(53013-53112)
[»] chr2 (34 HSPs)
chr2 (19-115)||(18765651-18765747)
chr2 (19-246)||(13315053-13315289)
chr2 (19-246)||(29565850-29566083)
chr2 (19-120)||(19466610-19466712)
chr2 (19-100)||(15328299-15328380)
chr2 (19-103)||(36398882-36398967)
chr2 (19-103)||(23758612-23758697)
chr2 (19-109)||(12910470-12910561)
chr2 (19-103)||(24790246-24790331)
chr2 (19-99)||(31587467-31587547)
chr2 (19-101)||(24317897-24317981)
chr2 (19-67)||(26860384-26860432)
chr2 (19-120)||(21250284-21250387)
chr2 (19-74)||(25347210-25347265)
chr2 (23-100)||(12952462-12952540)
chr2 (19-120)||(21530355-21530457)
chr2 (19-99)||(27111071-27111151)
chr2 (22-101)||(20649647-20649727)
chr2 (33-100)||(31067586-31067654)
chr2 (33-100)||(17363507-17363575)
chr2 (33-100)||(17395546-17395614)
chr2 (22-74)||(19198369-19198420)
chr2 (19-109)||(22582394-22582485)
chr2 (23-74)||(24283620-24283671)
chr2 (33-93)||(20378326-20378387)
chr2 (33-100)||(30947324-30947392)
chr2 (33-100)||(45550031-45550098)
chr2 (23-70)||(20476668-20476715)
chr2 (39-89)||(25867173-25867224)
chr2 (204-246)||(18765511-18765553)
chr2 (23-65)||(20475367-20475409)
chr2 (40-96)||(28645773-28645830)
chr2 (33-100)||(8163074-8163142)
chr2 (68-100)||(18593566-18593598)
[»] scaffold0143 (1 HSPs)
scaffold0143 (19-120)||(36268-36369)
[»] scaffold0032 (1 HSPs)
scaffold0032 (19-121)||(103075-103177)
[»] scaffold0338 (1 HSPs)
scaffold0338 (19-109)||(16301-16391)
[»] scaffold0102 (1 HSPs)
scaffold0102 (19-103)||(36992-37077)
[»] scaffold0008 (1 HSPs)
scaffold0008 (19-109)||(40316-40406)
[»] scaffold0059 (2 HSPs)
scaffold0059 (19-120)||(50179-50281)
scaffold0059 (19-120)||(61561-61662)
[»] scaffold0226 (3 HSPs)
scaffold0226 (19-109)||(7627-7718)
scaffold0226 (19-103)||(18213-18299)
scaffold0226 (19-103)||(27607-27693)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-109)||(26385-26476)
[»] scaffold0103 (1 HSPs)
scaffold0103 (19-120)||(25761-25863)
[»] scaffold0022 (1 HSPs)
scaffold0022 (26-102)||(3111-3187)
[»] scaffold0259 (1 HSPs)
scaffold0259 (19-74)||(17365-17420)
[»] scaffold0190 (1 HSPs)
scaffold0190 (19-109)||(16712-16803)
[»] scaffold0088 (1 HSPs)
scaffold0088 (19-74)||(36609-36664)
[»] scaffold0072 (1 HSPs)
scaffold0072 (33-100)||(18540-18607)
[»] scaffold0015 (1 HSPs)
scaffold0015 (19-70)||(202416-202467)
[»] scaffold0062 (1 HSPs)
scaffold0062 (39-100)||(2185-2247)
[»] scaffold0505 (1 HSPs)
scaffold0505 (20-99)||(10124-10204)
[»] scaffold0423 (1 HSPs)
scaffold0423 (26-116)||(13581-13672)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-70)||(110344-110395)
[»] scaffold0205 (1 HSPs)
scaffold0205 (33-93)||(9969-10030)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-63)||(37393-37437)
[»] scaffold0520 (1 HSPs)
scaffold0520 (19-120)||(5388-5490)
[»] scaffold0333 (1 HSPs)
scaffold0333 (19-100)||(5636-5717)
[»] scaffold0054 (1 HSPs)
scaffold0054 (39-100)||(8760-8822)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-103)||(87722-87807)
[»] scaffold0185 (1 HSPs)
scaffold0185 (19-103)||(2446-2531)
[»] scaffold0070 (1 HSPs)
scaffold0070 (55-98)||(3650-3694)


Alignment Details
Target: chr5 (Bit Score: 325; Significance: 0; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 19 - 375
Target Start/End: Original strand, 26183322 - 26183678
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26183322 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 26183421  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  26183422 tttatgctttgtgttttacttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataattggtgttgaaacatcgtatagaac 26183521  T
Q  219 atcttaagtctaacgtgtcagaatttcacatgttgaggatgaggttttacagcgtgccgaagaggatgaggatgcagatgatgatgaacatctgcatgat 318  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26183522 atcttaattctaacgtgccagaatttcacatgttgaggatgaggttttacagcgtgccgaagaggatgaggatgcagatgatgatgtacatctgcatgat 26183621  T
Q  319 gtaaaggtgccagtccagttggaatcatatcccaaggggccattagacgtgtctgtg 375  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26183622 gtagaggagccagtccagttggaatcatatcccaaggggccattagacgtgtctgtg 26183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 17920871 - 17921096
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  17920871 aatacggactacactagtggatttccttcctggcttggtagcccctagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgcctttta-t 17920969  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||  ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  17920970 tttatgctttgcatttttcttgtcttgtgttagcttagtgttcgaaacattttattcaacatctgtttctgtataacttgtatttaaacatcgtatagaa 17921069  T
Q  218 catcttaagtctaacgtgtcagaattt 244  Q
    |||  ||||||||||||| ||||||||    
T  17921070 cattataagtctaacgtggcagaattt 17921096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 7898002 - 7898229
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||     
T  7898002 aataaggactacactagtggatttccttcctggcttggtagcctccagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgtcttttac- 7898100  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||  ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||    
T  7898101 tttatgctttgcatttttcttgtcttgtgttagcttagtgttcgaaacattttattcaacatctgtttctgtataacttgtgttgaaacatcgcataaaa 7898200  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
     ||  ||||||||||||| ||||||||||    
T  7898201 tattgtaagtctaacgtgccagaatttca 7898229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 20498241 - 20498464
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccattt-ac 117  Q
    |||||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| | ||| ||    
T  20498241 aataaggactacacgagtggatttccttcctgacttggtagcctccagagtaggtgacgttgcaccgaactgggttaacaaattcactgtgtctttttac 20498340  T
Q  118 ttttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||  |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||  |||||||||||||||| | ||    
T  20498341 ttttatgctttacgttttacttgtttttgttagcttagtgttcgaaacatttcattcaacatctgtttgtgaataacctgtattgaaacatcgtacaaaa 20498440  T
Q  218 catcttaagtctaacgtgtcagaa 241  Q
     ||||||||||||| ||| |||||    
T  20498441 tatcttaagtctaatgtgccagaa 20498464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 20286825 - 20286650
Alignment:
Q  72 gtgacgttgcaccgaactgggttaacaaactctctgtgccatttacttttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacatttt 170  Q
    ||||||||| ||||||||||||||||||||   ||||||||||||||||| || ||| ||||||| ||||||| |||||||||| |||||||||||| |     
T  20286825 gtgacgttgtaccgaactgggttaacaaaccgactgtgccatttacttttgtgttttctgttttacttgtcttctgttagcttaatgttcgaaacatatc 20286726  T
Q  171 attcaacatctgtttctgtataactggtattgaaacatcgtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||||| | |||| |||||||| || |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  20286725 attcaacatttctttcagtataacttgtgttgaaatatcgtatagaacatcttaagtctaacgtgccagaatttca 20286650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 20845882 - 20845983
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  20845882 aataaggactacactagtggatttccttcctgacttggtagcccccatagtaggtgacgttgcaccgaactgggttaacaaactctgtgtgccttttact 20845981  T
Q  119 tt 120  Q
    ||    
T  20845982 tt 20845983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 22130922 - 22131022
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  22130922 aataaggattacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgctttttact 22131020  T
Q  119 tt 120  Q
    ||    
T  22131021 tt 22131022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 20741024 - 20741125
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||| |||| |||||||||| |||    
T  20741024 aataaggactacactagtggatttccctcctcgcttggtagcccccagagtaggtgacgttgaaccgaattgggttaacagactcactgtgccattgact 20741123  T
Q  119 tt 120  Q
    ||    
T  20741124 tt 20741125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 11204781 - 11204702
Alignment:
Q  31 actagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgcc 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11204781 actagtggatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa-tctctgtgcc 11204702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 13942085 - 13942187
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctc-tgtgccattta 116  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||   ||| ||||||||| ||||||| ||||||| |||||||||||    
T  13942085 aataaggactacactagtggatttccttcctgacttggtagcccccagagtaggtgtgtttgtcaccgaactaggttaac-aactctcatgtgccattta 13942183  T
Q  117 cttt 120  Q
    ||||    
T  13942184 cttt 13942187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 30605778 - 30605869
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||   ||| ||||||||||||| ||||||||| |||||    
T  30605778 aataaggactgcactagtggatttccttcctggattggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtg 30605869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 22184690 - 22184786
Alignment:
Q  24 ggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttacttt 120  Q
    |||||| |||| || ||||||||||||||||||||||||| ||| |||||||| ||||  |||||||||| |||||||||||||||||| ||||||||    
T  22184690 ggactagactaatggatttccttcctggcttggtagcccctagatgtaggtga-gttgtgccgaactgggataacaaactctctgtgccgtttacttt 22184786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 26036882 - 26036797
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg-acgttgcaccgaactgggttaacaaactc 103  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    || ||||||||||||| |||||||||    
T  26036882 aataaggacaacactagtggatttccttcctggcttggtagcccccagagtaggtgtgttttccaccgaactgggtcaacaaactc 26036797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 13338663 - 13338573
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||| |||   ||| ||||||||||||||||||||||| |||||    
T  13338663 aataaggattacactagtggatttccttcctggcttggtag-ccccagagtatgtgtgtttgtcaccgaactgggttaacaaactcactgtg 13338573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 13735061 - 13735163
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||||||||||||| || |||||||||||| ||||||| |||||||||||||||   ||| ||||||| ||||| ||||||||| ||||| | |||||    
T  13735061 aataaggactacactaatggatttccttcctgacttggtaacccccagagtaggtgtgtttgtcaccgaagtgggtcaacaaactcactgtgtcttttac 13735160  T
Q  118 ttt 120  Q
    |||    
T  13735161 ttt 13735163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 17661501 - 17661583
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||| ||||||||| |||||||||| |||||||||||||||| ||||||||   ||| |||||||||||||||||||||||    
T  17661501 aaggacaacactagtgaatttccttccaggcttggtagcccccatagtaggtgtgtttgtcaccgaactgggttaacaaactc 17661583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 22404849 - 22404951
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||   ||| ||||||||||||| |||||||||  ||||  ||||||    
T  22404849 aataaggactatactagtggatttccttcctggcttggtagcccctagagcaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttac 22404948  T
Q  118 ttt 120  Q
    |||    
T  22404949 ttt 22404951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 24117668 - 24117586
Alignment:
Q  18 caataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||| |   ||| |||||||||||||||||||    
T  24117668 caataaggactacactagtggatttcattcctggcttggtagccaccagagtaggcgtgtttgtcaccgaactgggttaacaa 24117586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 24394690 - 24394622
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||| ||||||||||||    
T  24394690 tagtggatttccttcctggcttggatgcccccagatgtaggtgacgttgcaccgaaatgggttaacaaa 24394622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 9522607 - 9522505
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||| | ||| |||| ||||  |||||||||||||||||||   ||||||| |||||    
T  9522607 aataaggactacactagtgaatttccttcttgacttggtagcccccaaatgtaagtga-gttgtgccgaactgggttaacaaaccaactgtgccttttac 9522509  T
Q  118 tttt 121  Q
    ||||    
T  9522508 tttt 9522505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 24189934 - 24189843
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |||   ||| ||||||||| ||| ||||||||| |||||    
T  24189934 aataaagactacactagtgaatttccttcccggcttggtagcccccagagtatgtgtgtttgtcaccgaactaggtcaacaaactcactgtg 24189843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 25105508 - 25105599
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| || |||||||   ||| ||||||||||||| ||||| ||| |||||    
T  25105508 aataaggactacactagtggatttccttcctgacttggtagcccctagtgtaggtgcgcttgtcaccgaactgggtcaacaagctcactgtg 25105599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 25164601 - 25164692
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| || |||||||   ||| ||||||||||||| ||||| ||| |||||    
T  25164601 aataaggactacactagtggatttccttcctgacttggtagcccctagtgtaggtgcgcttgtcaccgaactgggtcaacaagctcactgtg 25164692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 26329301 - 26329392
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgtt-gcaccgaactgggttaacaaactctctgtg 109  Q
    |||||||||||||| |||| |||||||||||||||||||||| | |||||||||||   ||  ||||||||||||| ||||||||| |||||    
T  26329301 aataaggactacaccagtggatttccttcctggcttggtagctcacagagtaggtgtgtttatcaccgaactgggtcaacaaactcactgtg 26329392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 18221182 - 18221097
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||   ||| ||||||||||| | |||||||||    
T  18221182 aataaggactacactagtggatttccttcttggcttggtagaccccaaagtaggtgtgtttgtcaccgaactggatcaacaaactc 18221097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 20714824 - 20714909
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||| |||||||||||   ||| ||||||||| ||| |||||||||    
T  20714824 aataaggactacactagtggatttcctacctgacttggtagccctcagagtaggtgtgtttgtcaccgaactaggtcaacaaactc 20714909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 23420649 - 23420734
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||||   ||| ||||||||||||| | |||||||    
T  23420649 aataaggactacactagtggatttccttcctagcttggtagcccttagagtaggtgtatttgtcaccgaactgggtcagcaaactc 23420734  T

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Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 15116850 - 15116782
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  15116850 tagtgaatttccttcctgacttggtagcccccagacgtaggtgaggttgcactgaactgggtcaacaaa 15116782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22979813 - 22979736
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||   ||| |||||||||||||||||||    
T  22979813 aaggactacactagtgtatttgcttccttgcttggtag-ccccatagtaggtgtgtttgtcaccgaactgggttaacaa 22979736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 22246439 - 22246478
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggta 58  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22246439 aataaggactacactagtggatttccttcctggcttggta 22246478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 23623949 - 23623894
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||| ||||||||||||| ||||||||||| | || |||||||||||||||||||    
T  23623949 aataacgactacactagtggatttccttcctaggttagtagcccccagagtaggtg 23623894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 11756292 - 11756373
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| || ||||| |||| |||||||||||| |||| ||||||||| | |||||||| |||||  |||||||||||||||||    
T  11756292 aataatgaatacacaagtgaatttccttcctgccttgttagcccccaaatgtaggtga-gttgcgtcgaactgggttaacaaa 11756373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 22252129 - 22252162
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggc 52  Q
    ||||||||||||||||||| ||||||||||||||    
T  22252129 aataaggactacactagtggatttccttcctggc 22252162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 19663646 - 19663578
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||| ||| |||||| ||||||| || | |||||||| ||||||||||||||||| ||||||    
T  19663646 tagtgaatttcattcatggctttgtagcccgcatatgtaggtgaggttgcaccgaactgggtcaacaaa 19663578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 3e-95; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 3290771 - 3290999
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  3290771 aataaggactacactagtggatttccttcctggcttggtagcccccagagttggtgacgttgcaccaaactgggttaacaaactcactgtgccatttact 3290870  T
Q  119 tttatgctttgtgttttatttgtc-tttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||| ||    
T  3290871 tttatgctttgtgttttacttgtcttttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataacttgtgttgaaacatcttataaaa 3290970  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    ||||||||||||||||||  |||||||||    
T  3290971 catcttaagtctaacgtgctagaatttca 3290999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 14984743 - 14984518
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  14984743 aataaggactacactagtggatttccttcctggcttgatagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctatgtgccatttatt 14984644  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||||  ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  14984643 tttatgctttgtg--ttacttgtctttgttagcttagtgttcaaaacatcttattcaacatctgtttctgtataacttgtgttgaaacatcatatagaac 14984546  T
Q  219 atcttaagtctaacgtgtcagaatttca 246  Q
    ||| ||||||||||||| ||||||||||    
T  14984545 atcgtaagtctaacgtgccagaatttca 14984518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 15414354 - 15414129
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  15414354 aataaggactacactagtggatttccttcctggcttgatagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctatgtgccatttatt 15414255  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||||  ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  15414254 tttatgctttgtg--ttacttgtctttgttagcttagtgttcaaaacatcttattcaacatctgtttctgtataacttgtgttgaaacatcatatagaac 15414157  T
Q  219 atcttaagtctaacgtgtcagaatttca 246  Q
    ||| ||||||||||||| ||||||||||    
T  15414156 atcgtaagtctaacgtgccagaatttca 15414129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 48797705 - 48797934
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccattt-ac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||    
T  48797705 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttgcactgaactgggttaacaaactcactgtgcctttttac 48797804  T
Q  118 tttt-atgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtataga 216  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || |||||  || |||||||||||||||||    
T  48797805 tttttatgctttgagttttacttgtctttgttagcttagtgttcgaaacatttcattcaacatctgtttgtgaataacctgtgttgaaacatcgtataga 48797904  T
Q  217 acatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||||||||| ||||| || |||||||    
T  48797905 acatcttaagtctgacgtgccataatttca 48797934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 7620152 - 7619925
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||     
T  7620152 aataaggactacactagtggatttccttcctgacttggtagcctccaaagtaggtgacgttgcaccgaactgggttaacaaactcactgtgccttttac- 7620054  T
Q  119 tttatgctttgtgttttatttgt-ctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||  ||||  |||| || ||||||||||||||||||||||| | ||||||||||||||| ||||||||| || ||||||||||||||||||    
T  7620053 tttatgctttgcatttttcttgtcctatgttagcttagtgttcgaaacatctcattcaacatctgtttatgtataacttgtgttgaaacatcgtatagaa 7619954  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||| ||||| ||||||| ||||||||||    
T  7619953 catcgtaagtataacgtgccagaatttca 7619925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 14975504 - 14975277
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||| |||||||||  ||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||  |||| |    
T  14975504 aataaggaatacactagtagatttcgttcctggcatggttgcccccggagtaggtgacgttgcaccgaactgggttaacaaaatctgtgtgctgtttatt 14975405  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||| | || |||||||||| |||||||     
T  14975404 tttatgctttgtgttttacttgtctttgttagcttagtgttcaaaacatcttattcaacatctatttatgtataatttgtgttgaaacatcatatagaat 14975305  T
Q  219 atcttaagtctaacgtgtcagaatttca 246  Q
    ||| ||||||||||||| ||||||||||    
T  14975304 atcgtaagtctaacgtgccagaatttca 14975277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 15404980 - 15404753
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||| |||||||||  ||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||  |||| |    
T  15404980 aataaggaatacactagtagatttcgttcctggcatggttgcccccggagtaggtgacgttgcaccgaactgggttaacaaaatctgtgtgctgtttatt 15404881  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||| | || |||||||||| |||||||     
T  15404880 tttatgctttgtgttttacttgtctttgttagcttagtgttcaaaacatcttattcaacatctatttatgtataatttgtgttgaaacatcatatagaat 15404781  T
Q  219 atcttaagtctaacgtgtcagaatttca 246  Q
    ||| ||||||||||||| ||||||||||    
T  15404780 atcgtaagtctaacgtgccagaatttca 15404753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 30226157 - 30225926
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgcca--ttt 115  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||   |||    
T  30226157 aataaggactacactagtggatttccttcctgacttggtagcccccagatgtaggtgacgttgcaccgaactgggttaacaatctctttgtgcctccttt 30226058  T
Q  116 acttttatgctttgtgttttatttgtcttt-gttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtata 214  Q
    |||||| |||||| ||||||| |||||||| ||||||||| ||||| |||||| |  |||||||||||||||||| ||| |||| ||| ||||||| |||    
T  30226057 acttttctgctttttgttttacttgtcttttgttagcttattgttccaaacatatcgttcaacatctgtttctgtgtaattggtgttggaacatcgcata 30225958  T
Q  215 gaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||| |||||||||| ||||| |||||||    
T  30225957 gaacatcgtaagtctaacatgtcaaaatttca 30225926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 9564327 - 9564227
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9564327 aataaggactacactattggatttcct-cctggctttgtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccttttact 9564229  T
Q  119 tt 120  Q
    ||    
T  9564228 tt 9564227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 13455199 - 13455283
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13455199 aataaggactacactagtggatttccttccttgcttggtagcccccagagtaggtgacgttgcaccgaactaggttaacaaactc 13455283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 42782827 - 42782594
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccat-ttac 117  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| | || |    
T  42782827 aataaggactacactagtggattttcttcctggcttggtagcccccagagtaggtgacattgcaccgaactgggttaac-aactctctttgccttctttc 42782729  T
Q  118 ttt--tatgc--tttgtg-ttttatttgtct-ttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgt 211  Q
    |||  | |||  |||||| |||||  ||||| ||||||||||| ||||   | ||| || |||||||||||| |||| |||| |||| ||| |||||||     
T  42782728 ttttctttgcattttgtgtttttaactgtctgttgttagcttaatgttttgatcatattgttcaacatctgtgtctgcataattggtgttggaacatcgc 42782629  T
Q  212 atagaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||| |||||  |||||| |||||| ||||||||||    
T  42782628 ataaaacattgtaagtcgaacgtgccagaatttca 42782594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 4794676 - 4794766
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgc 110  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  4794676 aataaggactacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttgcactgaactgggttaaaaaactctctgtgc 4794766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 9566976 - 9566876
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||    
T  9566976 aataaggactacacttgtggatttcct-cctggcttggtagccccctgagtaggtaacgttgcaccgaactgggttaacaaactctctgtgctttttact 9566878  T
Q  119 tt 120  Q
    ||    
T  9566877 tt 9566876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 11628711 - 11628477
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||||||||  |||| ||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  11628711 aataaggactacaagagtggatttccttcctagtttggtaacccccaaagtaggtgacgttgcaccgaactgggttaacaaactcactgtgccattttct 11628612  T
Q  119 tt------tatgctttgtgttttatttg-tctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgt 211  Q
    ||      | |  ||| |||| |  ||| | | |||||||||| |||||  | | ||||||||||||||| ||| |  |||| || | ||| |||||||     
T  11628611 ttactatctgttatttttgttatccttgttatctgttagcttaatgttctgatctttttattcaacatctatttttcgataattgatgttggaacatcgc 11628512  T
Q  212 atagaacatcttaagtctaacgtgtcagaatttca 246  Q
    |||||||||||||||||||||||| ||||| ||||    
T  11628511 atagaacatcttaagtctaacgtgccagaacttca 11628477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 11560592 - 11560829
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||| |||||| ||| | ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||    
T  11560592 aataagcactacaatagcggatttccttcctagcttggtagcccccagagtaggtgacagtgcaccgaactgggttaacaaactcactgtgccattttct 11560691  T
Q  119 tt--tatgctttgtgtt--------ttatttgtctttgttagctta-gtgttcgaaacattttattcaacatctgttt-ctgtataactggtattgaaac 206  Q
    ||  | |  ||||| ||        ||||||   |||||||| ||| ||||||   |||||||||||||||||||||| || | ||||| || ||| |||    
T  11560692 ttcctttcatttgttttactcttgtttatttacatttgttagattaagtgttctggacattttattcaacatctgttttctatgtaactcgtgttggaac 11560791  T
Q  207 atcgtatagaacatcttaagtctaacgtgtcagaattt 244  Q
    |||  |||||||||||||||  ||||||||||||||||    
T  11560792 atctcatagaacatcttaagattaacgtgtcagaattt 11560829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 15436120 - 15436037
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaact 102  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  15436120 aataaggactacactagtggatttcctttctggcttggtagcccctagagtaggtgacgttgcatcgaattgggttaacaaact 15436037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 23174967 - 23175050
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  23174967 aataaggactacactagtggatttccttcctggcttggtagcccctagatgtaggtgatgttgcaccgaactgggttaacaaac 23175050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 26133001 - 26133103
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||  |||| | |||||    
T  26133001 aataaggactacactagtggatttccttcctggcttgatagcccccagagtaggtgtctttgtcaccgaactgggttaacaaactcattgtgtcttttac 26133100  T
Q  118 ttt 120  Q
    |||    
T  26133101 ttt 26133103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 2076565 - 2076496
Alignment:
Q  31 actagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2076565 actagtggatttccttcatggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa 2076496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 2082984 - 2082915
Alignment:
Q  31 actagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2082984 actagtggatttccttcatggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa 2082915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 15506339 - 15506247
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgcc 111  Q
    ||||||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||  |||||||    
T  15506339 aataaggactacactagtggatttccattctggcttggtagcccctagagtaggtgacgttgcatcgaattgggttaacaaacttcctgtgcc 15506247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 10658455 - 10658353
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||   ||| ||| ||||||||||||||||||  ||||||| |||||    
T  10658455 aataaggactacactagtggatttccttcctggcttggtagcctccagagtaggtgtgtttgtcacggaactgggttaacaaacttgctgtgccttttac 10658356  T
Q  118 ttt 120  Q
    |||    
T  10658355 ttt 10658353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 20991614 - 20991529
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  20991614 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 20991529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 24813998 - 24813914
Alignment:
Q  18 caataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  | |||||| | |||||||||||||||||||||||||    
T  24813998 caataaggactacactagtggatttccttcctggcttggtagcccccctatgtaggtcatgttgcaccgaactgggttaacaaac 24813914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 15708243 - 15708141
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||||| | |||||| |||||||| ||||||||||||||||   ||||||| |||||    
T  15708243 aataaggactacactagtggatttccttcctagcttggtagaccccagatgcaggtga-gttgcaccaaactgggttaacaaaccaactgtgccttttac 15708145  T
Q  118 tttt 121  Q
    ||||    
T  15708144 tttt 15708141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 16207968 - 16208023
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16207968 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtg 16208023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 23057274 - 23057179
Alignment:
Q  23 aggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||   ||| ||||||||||||||||||||   |||||| |||||||    
T  23057274 aggactacactagtgaatttccttcctggcttggtagccctcagagtaggtgtgtttgtcaccgaactgggttaacaaataatctgtgtcatttac 23057179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 7586617 - 7586718
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    ||| ||||||||||||| |||||| | |||||||| |||||    
T  7586617 aataaggactacactagtggatttccttcctggcttggtag-ccccagagtaggtatgtttgtcaccgaactgggtcaacaaattgtctgtgccttttac 7586715  T
Q  118 ttt 120  Q
    |||    
T  7586716 ttt 7586718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 31269148 - 31269224
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaac 101  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||  ||| |||||||||||||||||||||    
T  31269148 actacactagtggatttccttcatggcttggtagcccccggagtaggtgagtttgtcaccgaactgggttaacaaac 31269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 4458811 - 4458756
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  4458811 aataaggactacactagtagatttccttcctggcttggtagcccccagagtaggtg 4458756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 11588536 - 11588445
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||   ||| |||||| |||||| ||||||||| |||||    
T  11588536 aataaggactacactagtggatttccttcctggcttggtagccgctagagtaggtgtgtttgtcaccgagctgggtcaacaaactcactgtg 11588445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 16436846 - 16436755
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||   ||| ||||||| ||||| ||||||||| |||||    
T  16436846 aataaggactacactagtggatttccttccttgcttggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcactgtg 16436755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 11521497 - 11521599
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||   ||| |||| |||||||| |||||||||  ||||  ||||||    
T  11521497 aataaggactacactagtagatttccttcctggcttggtagcccctagagtaggtgtgtttgtcaccaaactgggtcaacaaactcattgtgttatttac 11521596  T
Q  118 ttt 120  Q
    |||    
T  11521597 ttt 11521599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 14926719 - 14926621
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccattta 116  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    || |||| |||||||||||||||||   |||||||||||    
T  14926719 aataaggactacactagtagatttccttcttggcttggtagcccccagagtaggtgtgtctgtcaccaaactgggttaacaaacttgttgtgccattta 14926621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 15350185 - 15350087
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccattta 116  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    || |||| |||||||||||||||||   |||||||||||    
T  15350185 aataaggactacactagtagatttccttcttggcttggtagcccccagagtaggtgtgtctgtcaccaaactgggttaacaaacttgttgtgccattta 15350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 23956949 - 23956847
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||| |||||||||||||||||| | | ||||| ||   ||| ||||||||| ||| ||||||||||||||||| |||||    
T  23956949 aataaggactacactagtggattttcttcctggcttggtagcctctaaagtagatgtgtttgtcaccgaactaggtcaacaaactctctgtgccttttac 23956850  T
Q  118 ttt 120  Q
    |||    
T  23956849 ttt 23956847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 42636319 - 42636217
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    ||| ||||||||| ||||||||||||   |||||| |||||    
T  42636319 aataaggactacactagtggatttccttccttgcttggtagcctccagagtaggtatgtttgtcaccgaacttggttaacaaacttgatgtgccttttac 42636220  T
Q  118 ttt 120  Q
    |||    
T  42636219 ttt 42636217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 24902178 - 24902078
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | | ||||||   ||| ||| ||||||||| ||||||  ||||||||| |||||    
T  24902178 aataaggactacactagtggatttccttcctggcttggtagcccctataataggtgtgtttgtcactgaactgggtcaacaaa--ctctgtgccttttac 24902081  T
Q  118 ttt 120  Q
    |||    
T  24902080 ttt 24902078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 26195544 - 26195626
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    |||||||| |||| ||||| |||| |||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  26195544 aataaggaatacagtagtgaattttcttcttggcttggtagcctccagatgtaggtga-gttgcaccgaactgggttaacaaac 26195626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 29546224 - 29546279
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  29546224 aataaggactacagtagtggatttccttcctggcttggtagccccgagagtaggtg 29546279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 645205 - 645123
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 100  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||   ||| ||| ||||||||||||||||    
T  645205 aataaggactacactggtggatttccttcctggcttcgtagcccccatagtaggtgtgtttgtcactgaactgggttaacaaa 645123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 7508507 - 7508426
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| | ||||||||   ||| || ||||||||||||||||    
T  7508507 aataaagactacactagtggatttccttcctggcttggtagccccaaaagtaggtgtgtttgtcatcgaactgggttaacaa 7508426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 10251512 - 10251431
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgtt-gcaccgaactgggttaacaa 99  Q
    |||||||||||||||||   ||||||||||||||||||||||| ||||||||||||   ||  |||||||||||||||||||    
T  10251512 aataaggactacactagaagatttccttcctggcttggtagcctccagagtaggtgtgtttatcaccgaactgggttaacaa 10251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 21260587 - 21260490
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccattt 115  Q
    |||||||||||||||| || |||| ||||||   ||||||||||||||||||||||   ||| ||||||||||| | |||||||| ||||||||||||    
T  21260587 aataaggactacactaatggattttcttcctaagttggtagcccccagagtaggtgtgtttgtcaccgaactggatcaacaaactgtctgtgccattt 21260490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 4547853 - 4547917
Alignment:
Q  39 atttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactc 103  Q
    ||||||||||||||||| ||||||| ||||||||||  |||||| |||| |||||||||||||||    
T  4547853 atttccttcctggcttgatagcccctagagtaggtgctgttgcatcgaattgggttaacaaactc 4547917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 9894153 - 9894208
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  9894153 aataaggactacactagtggatttccttactgacttggtagtccccagagtaggtg 9894208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 10260231 - 10260298
Alignment:
Q  34 agtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    |||| ||||||||||||| ||||||||||||||| | |||||| |||||||||||||| |||||||||    
T  10260231 agtgaatttccttcctggtttggtagcccccagatgaaggtgaagttgcaccgaactgagttaacaaa 10260298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 10279886 - 10279832
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  10279886 aataaggactacactggtgaatttccttcctggcttggtag-ccccagagtaggtg 10279832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 12505760 - 12505697
Alignment:
Q  39 atttccttcctggcttggtagccccc-aga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  12505760 atttccttcctagcttggtagccccccagatgtaggtgacgttacaccgaactgggttaacaaa 12505697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 20596918 - 20596993
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 100  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||||||   ||| ||||||||| ||||||||||    
T  20596918 actacactagtcgatttccttcttggcttggtagcccccagagtaggtgtgtttgtcaccgaactcggttaacaaa 20596993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 23082860 - 23082915
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| |||||||||||| |||||||||||  ||||||||||    
T  23082860 aataaggactacactagtggatttccttcctgacttggtagcccgtagagtaggtg 23082915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 6045392 - 6045340
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtagg 72  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  6045392 aataaggactacactagtggattttcttcctggcttggtag-ccccagagtagg 6045340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 9732836 - 9732905
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccagag-taggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| ||||| ||| |||||||||||||||||||  ||||||||||||||| |||||| ||||||||||    
T  9732836 tagtgaatttcgttcatggcttggtagcccccagatctaggtgacgttgcactgaactgagttaacaaac 9732905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 23580040 - 23580121
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||| ||||||||   | | |||||||||||||||||||    
T  23580040 aataaggactacactagtagatttccttcttggcttggtaacccccatagtaggtgtgttagtcaccgaactgggttaacaa 23580121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 10309583 - 10309631
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  10309583 actacactagtggacttccttcttggcttggtagcccccagagtaggtg 10309631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 12484330 - 12484267
Alignment:
Q  39 atttccttcctggcttggtagccccc-aga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||||||| |||||||||||||| ||| |||||||||||| ||||||||| ||||||||||    
T  12484330 atttccttcctagcttggtagccccccagatgtaggtgacgttacaccgaacttggttaacaaa 12484267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 14687433 - 14687358
Alignment:
Q  25 gactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||| ||||||||||| ||||||||||| ||| ||||||||   ||| ||||||||| |||||||||    
T  14687433 gactacactagtgaatttccttcctagcttggtagcctccatagtaggtgtgtttgtcaccgaactaggttaacaa 14687358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 11998951 - 11998866
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| || |||||||   ||| || |||||||||| |||||||||    
T  11998951 aataaggactacactagtggatttccttcctggcttgg-agcccccggacgtaggtgtgtttgtcatcgaactgggtcaacaaactc 11998866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 20588800 - 20588846
Alignment:
Q  25 gactacactagtgtatttccttcctggcttggtagcccccagagtag 71  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||    
T  20588800 gactacactagttgatttccttcctggcttggtagcccccaaagtag 20588846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 2392878 - 2392947
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| ||||| ||| | |||||||||||| || | |||||||||||||||||||||||| |||||||||    
T  2392878 tagtgaatttcattcttagcttggtagccctcaaacgtaggtgacgttgcaccgaactggattaacaaac 2392947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 19353193 - 19353101
Alignment:
Q  28 tacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttacttt 120  Q
    |||||||||| ||||||||| |||||| ||||||| |||||||||||  |||| || ||||||||||||||||     ||||||||||||||||    
T  19353193 tacactagtggatttccttcttggcttagtagccctcagagtaggtg-tgttgtcatcgaactgggttaacaattcacctgtgccatttacttt 19353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 21546902 - 21546971
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| ||||||| |||  |||||||||| ||||| |||||||| ||||||| |||||||||||||||||    
T  21546902 tagtgaatttcctccctaacttggtagcctccagatgtaggtgaagttgcacggaactgggttaacaaac 21546971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 24049572 - 24049508
Alignment:
Q  55 ggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttacttt 120  Q
    |||||||| || ||||||||| |||||||||| || ||||| ||||||| ||||||||||||||||    
T  24049572 ggtagccctcaaagtaggtgatgttgcaccga-ctaggttagcaaactcactgtgccatttacttt 24049508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 12325885 - 12325845
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtag 59  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  12325885 aataatgactacactagtggatttccttcctggcttggtag 12325845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 14165237 - 14165193
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||    
T  14165237 aataaggactacactagtggatttccttcctggctatgtagcccc 14165193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 11407040 - 11407091
Alignment:
Q  23 aggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||| ||| | | |||||||||||| |||||||||||||||||||||    
T  11407040 aggactacattagcggacttccttcctggcatggtagcccccagagtaggtg 11407091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 5299205 - 5299140
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaac 97  Q
    ||||| ||||||||||||||||||||||||| |||  |||| || |||| ||| ||||||||||||    
T  5299205 tagtggatttccttcctggcttggtagcccctagatctaggcgatgttgtaccaaactgggttaac 5299140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 24049426 - 24049373
Alignment:
Q  193 actggtattgaaacatcgtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    |||||| ||| ||||| | ||||||||||||||||||||||||  |||||||||    
T  24049426 actggtgttggaacattgcatagaacatcttaagtctaacgtgcgagaatttca 24049373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 3e-95; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 24143206 - 24142978
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24143206 aatacggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttgcaccgaactaggttaacaaactctctgtgccatttact 24143107  T
Q  119 tttatgctttgtgttttatttgtc-tttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||| |||| ||    
T  24143106 tttatgctttgtgttttacttgtcttttgttagcttagtgttcgaaacatttcattcaacatctgtttctgtataacttgtgttgaaacatcttatataa 24143007  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||||||||||||||||| ||||||||||    
T  24143006 catcttaagtctaacgtgccagaatttca 24142978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 25354730 - 25354951
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttacttttatgc 125  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  25354730 actacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgtcatttacttttatgc 25354829  T
Q  126 tttgtgttttatttgtc-tttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaacatctta 224  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||  |||||||| ||||||||||||||| || |||||||||| ||||||||||||||    
T  25354830 tttgtgttttacttgtcttttgttagcttagtgttcaaaacatttctttcaacatttgtttctgtataacttgtgttgaaacatcttatagaacatctta 25354929  T
Q  225 agtctaacgtgtcagaatttca 246  Q
    ||||||||||| ||||||||||    
T  25354930 agtctaacgtgccagaatttca 25354951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 23541315 - 23541091
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  23541315 aatacggactacactagtggatttccttcctggcttggtagcctccagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgccatttac- 23541217  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||  ||||  |||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  23541216 tttatgctttgcatttttcttgtgttgtgttagcttagtgttcaaaacattttattcaacatctgtttctgtataacttgtgttgaaacgtcgtatagaa 23541117  T
Q  218 catcttaagtctaacgtgtcagaatt 243  Q
    |||| |||||||||||||||||||||    
T  23541116 catcgtaagtctaacgtgtcagaatt 23541091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 22555041 - 22554818
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccattt-ac 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||| | ||| ||    
T  22555041 aataaggactacactagtggatttccttcctggcttggtagccttcagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgtctttttac 22554942  T
Q  118 ttttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    ||||||  |||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||  || |||||||||||| |||||    
T  22554941 ttttatcatttgcgttttacttgtctttgttagcttagtgtttgaaacatttcattcaacatctgtttgtgaataacctgtgttgaaacatcgtctagaa 22554842  T
Q  218 catcttaagtctaacgtgtcagaa 241  Q
    |||||||||||||||||| |||||    
T  22554841 catcttaagtctaacgtgccagaa 22554818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 19894898 - 19895118
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttacttttatgc 125  Q
    |||||||||||| ||||| |||||||||||||||| || |||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||    
T  19894898 actacactagtggatttcgttcctggcttggtagctcctagagtatgtgacgttgcaccgaactaggttaacaaactcactgtgccttttacttt-atgc 19894996  T
Q  126 tttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaacatctta 224  Q
    |||   ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||    
T  19894997 tttacatttttcttgtcttgtgttagcttagtgttcgaaacattttattcaacatctgtttctgtataacttgtgttgaaacatcgtatagaacatcgta 19895096  T
Q  225 agtctaacgtgtcagaatttca 246  Q
    ||||||||||| ||||||||||    
T  19895097 agtctaacgtgccagaatttca 19895118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 46741837 - 46742062
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| ||||||    
T  46741837 aataaggattacactagtggatttccttcatggcttggtagcccccagagtaggtgacgttgcaccgaaatgggttaacaaactcattgtgccttttact 46741936  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||  ||||  |||||||||||||||||||||||||||||||| | |||||||||  || ||||||||  || ||||||||||| | |||||    
T  46741937 tttatgctttgcatttttcttgtctttgttagcttagtgttcgaaacatttcactcaacatcttattttgtataacctgtgttgaaacatcgcaaagaac 46742036  T
Q  219 atcttaagtctaacgtgtcagaattt 244  Q
    ||||||||||||||||| || |||||    
T  46742037 atcttaagtctaacgtgccataattt 46742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 11325233 - 11325456
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccattt-ac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||| |||  |||||||||| ||| ||||| | ||| ||    
T  11325233 aataaggactacactagtggatttccttcctggcttggtagcctccagagcaggtgacgttgcacggaatcgggttaacaatctcactgtgtctttttac 11325332  T
Q  118 ttttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
     ||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || |||||  || |||||||||| || ||||    
T  11325333 atttatgctttgcgttttacttgtctttgttagcttagtgttcgaaacatttcattcaacatctgtttgtgaataacctgtgttgaaacatcatacagaa 11325432  T
Q  218 catcttaagtctaacgtgtcagaa 241  Q
    |||||||||||||||||| |||||    
T  11325433 catcttaagtctaacgtgccagaa 11325456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 21478179 - 21478095
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21478179 aataaggactacactagtgtatttccttcctggcttggtagcctccagagtaggtgacgttgcaccgaactgggttaacaaactc 21478095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 11905165 - 11905065
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||||| |||||||| |||||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  11905165 aataaggactgcactagtggatttccttcctgacttggtaaccccaa-agtaggtgacgttgcaccgaactgggttaacaaactcactgtatcatttact 11905067  T
Q  119 tt 120  Q
    ||    
T  11905066 tt 11905065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 13399391 - 13399489
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccattta 116  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||   ||| ||||||||||||| ||||||||| |||| |||||||    
T  13399391 aataaggactacactagtggattttcttcctggcttggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtaccattta 13399489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 10190958 - 10190873
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  10190958 aataaggactacactggtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 10190873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 15700398 - 15700490
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagccccc-agagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||   ||| ||||||||||||| ||||||||| |||||    
T  15700398 aataaggactacactagtggatttccttcctggcttggtagcccccaagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtg 15700490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 8163857 - 8163763
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttgg-----tagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtg 109  Q
    |||||||||| |||||||| ||||||||||||||||||     ||||||  ||||||||||||||||||||||||||||||||||||||| |||||    
T  8163857 aataaggactgcactagtgaatttccttcctggcttggcttggtagccct-agagtaggtgacgttgcaccgaactgggttaacaaactcactgtg 8163763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 18618204 - 18618258
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggt 73  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18618204 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggt 18618258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 50907923 - 50907817
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||   ||| |||||||||| ||||||||||  | |||||| |||||    
T  50907923 aataaggactacactagtggattttcttcctgacttggtagccctcagagtaggtgtgtttgtcaccgaactgagttaacaaaccatatgtgccttttac 50907824  T
Q  118 ttttatg 124  Q
    |||||||    
T  50907823 ttttatg 50907817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 9069017 - 9068933
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaact 102  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||   |||  |||||||||||||||||||||    
T  9069017 aataaggactacactagtggatttccttcctcgcttggtagcctccagagtaggtgtgtttgttaccgaactgggttaacaaact 9068933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 13268904 - 13268816
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttacttt 120  Q
    ||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||   |||||| |||||||||    
T  13268904 tagtggatttccttcctgacttggtagcccccagatgtaggtgaagttgcaccgaactgggtgaacaaacaacctgtgctatttacttt 13268816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 16383962 - 16383907
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  16383962 aataaggactacactagtggatttccttcctggcttggaagcccccagagtaggtg 16383907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 10724331 - 10724241
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgt 108  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||   ||| ||||||||| ||| ||||||||| ||||    
T  10724331 aataaggactacactagtgaatttccttcctggctttgtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgt 10724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 10938100 - 10938010
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgt 108  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||   ||| ||||||||| ||| ||||||||| ||||    
T  10938100 aataaggactacactagtgaatttccttcctggctttgtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgt 10938010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 28019376 - 28019274
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| | |||   ||| ||||||||||||| |||||||||  ||||  ||||||    
T  28019376 aataaggactacactagtggatttccttcttggcttggtagcccccagagcatgtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttac 28019277  T
Q  118 ttt 120  Q
    |||    
T  28019276 ttt 28019274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 33746035 - 33745933
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||   ||| |||||||||| |||||||||||   |||||| |||||    
T  33746035 aataaggactacactagtggatttccttcctagcttggtagcctccatagtaggtgtttttgtcaccgaactgtgttaacaaacttgttgtgccttttac 33745936  T
Q  118 ttt 120  Q
    |||    
T  33745935 ttt 33745933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 33738050 - 33737973
Alignment:
Q  24 ggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 100  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||   ||| ||||||||||||||||||||    
T  33738050 ggactacactagtggatttccttcctggcttggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 33737973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 11865215 - 11865283
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  11865215 tagtgaattttcttcctggcttggtagcccccagacgtagaagacgttgcaccgaactgggttaacaaa 11865283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 25116897 - 25116810
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttg--gtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||   ||| ||||||||||||| || ||||||    
T  25116897 aataaggactacactagtggatttccttcctggcttggtgtagcccccagagtaggtgtgtttgtcaccgaactgggtcaataaactc 25116810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 10722055 - 10721954
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||  ||||||||||||| |||||| |||| ||| |||||||| ||||  |||||||||||||| ||||||||| | || |||||    
T  10722055 aataaggactacactagtagatttccttcctggattggtaacccctagatgtaggtga-gttgtgccgaactgggttaataaactctctataccttttac 10721957  T
Q  118 ttt 120  Q
    |||    
T  10721956 ttt 10721954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 10935824 - 10935723
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||  ||||||||||||| |||||| |||| ||| |||||||| ||||  |||||||||||||| ||||||||| | || |||||    
T  10935824 aataaggactacactagtagatttccttcctggattggtaacccctagatgtaggtga-gttgtgccgaactgggttaataaactctctataccttttac 10935726  T
Q  118 ttt 120  Q
    |||    
T  10935725 ttt 10935723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 32861719 - 32861626
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgcc 111  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||   ||| ||||||||||| | |||||| | ||||||||    
T  32861719 aataaggactacactagtggattttcttcctgacttggtagcccctagagtaggtgtgtttgtcaccgaactggatcaacaaattgtctgtgcc 32861626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 15162575 - 15162659
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaact 102  Q
    ||||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||   ||| ||||||||| ||| ||||||||    
T  15162575 aataaggactacactagtggatttccttcttgggttggcagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaact 15162659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 24608764 - 24608696
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||||||| |  ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  24608764 tagtgaatttcctttcaagcttggtagtccccagacgtaggtgacgttgcaccgaactgggttaacaaa 24608696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 19659510 - 19659463
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccag 66  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  19659510 aataaggactacactagtggatttccttcctggcttggtggcccccag 19659463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 23400282 - 23400325
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagccc 62  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  23400282 aataaggactacactagtggatttccttcctggcttggtagccc 23400325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 41785506 - 41785404
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||  |||| |||   ||| ||| ||||||||| |||||||||||| |||  |||||    
T  41785506 aatagggactacactagtggatttccttcttggcttggtagcccccgtagtatgtgtgtttgtcacagaactgggtcaacaaactctctatgcattttac 41785407  T
Q  118 ttt 120  Q
    |||    
T  41785406 ttt 41785404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 10198338 - 10198418
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||   ||| ||||||||| |||||||||    
T  10198338 aataaggactacactggtggatttccttcctggcttggtag-ccctagagtaggtgtgtttgtcaccgaactaggttaacaa 10198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 17871604 - 17871665
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggt 93  Q
    ||||| |||||||||||| ||||||||||| |||| |||||||| |||||||||||||||||    
T  17871604 tagtgaatttccttcctgacttggtagccctcagatgtaggtgaagttgcaccgaactgggt 17871665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 33899080 - 33899161
Alignment:
Q  23 aggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||||||| |||| |||| ||||||| |||||||||||| ||||||||||   ||| ||||||||||||| |||||||||    
T  33899080 aggactacaccagtggattttcttcctgacttggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 33899161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 11289438 - 11289525
Alignment:
Q  32 ctagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttactt 119  Q
    |||||| |||| |||||||||||| || |||| ||| || ||||||||||||||||||||||||||||||| |  |||||| |||||||    
T  11289438 ctagtgaattttcttcctggcttgttaacccc-agacgttggtgacgttgcaccgaactgggttaacaaacaccatgtgccttttactt 11289525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 2679918 - 2679839
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 100  Q
    |||||||||| ||||| |||||||||||  |||||| ||||||||||||||||   ||| ||||| ||||||||||||||    
T  2679918 aaggactacaatagtggatttccttcctaacttggttgcccccagagtaggtgtgtttgtcaccgtactgggttaacaaa 2679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 16655426 - 16655481
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    |||||||||||| |||||| ||||||||| ||||||| ||||||| ||||||||||    
T  16655426 aataaggactaccctagtggatttccttcttggcttgttagcccctagagtaggtg 16655481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 13876031 - 13875961
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactc 103  Q
    ||||| |||||||||||||||||||||||||    |||||| | |||||||| |||| |||||||||||||    
T  13876031 tagtgaatttccttcctggcttggtagccccatatgtaggttaagttgcaccaaactaggttaacaaactc 13875961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 11905031 - 11904927
Alignment:
Q  143 tttgttagcttagtgttcgaaacattttattcaacatctg-tttctgtataactggtattgaaacatcgtatagaacatcttaagtctaacgtgtcagaa 241  Q
    |||||||||||| |||||  ||||||||| ||||||||||  || ||| |||||| | ||| ||||||   |||||  ||||||| |||||||| |||||    
T  11905031 tttgttagcttaatgttctgaacattttactcaacatctgaattatgtgtaactgttgttggaacatctcgtagaaagtcttaagactaacgtgccagaa 11904932  T
Q  242 tttca 246  Q
    |||||    
T  11904931 tttca 11904927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 19183777 - 19183809
Alignment:
Q  28 tacactagtgtatttccttcctggcttggtagc 60  Q
    |||||||||| ||||||||||||||||||||||    
T  19183777 tacactagtggatttccttcctggcttggtagc 19183809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 19564893 - 19564825
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccagagt-aggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||| |||||||||| || | ||| | || |||||||||||| |||||||||||||||    
T  19564893 tagtggatttccttcttggcttggtaacctctagacttagatgacgttgcaccaaactgggttaacaaa 19564825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 4e-85; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 39081037 - 39080810
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||| |    
T  39081037 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttgcattgtactgagttaacaaactctctgtgccatttatt 39080938  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||| | ||||||| || |||||||||| ||||||||    
T  39080937 tttatgctttgtgttttacttgtctttgttagcttaatgttcaaaacatcttattcaacatctgtttttatataacttgtgttgaaacatcatatagaac 39080838  T
Q  219 atcttaagtctaacgtgtcagaatttca 246  Q
    ||| ||||||||||||| ||||||||||    
T  39080837 atcgtaagtctaacgtgccagaatttca 39080810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 37155613 - 37155841
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||    
T  37155613 aataaggattacactagtgaatttccttcctggcttggtagcccccagagtaggtgacgttataccgaactgggctaacaaactctttgtgccatttact 37155712  T
Q  119 tttatgctttgtgttttatttgtc-tttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||  | |||||||||| |||||||    
T  37155713 tttattctttgtgttttacttgtcttttgttagcttagtgtttgaaacatttcattcaacatttgtttctgtataacttatgttgaaacatcttatagaa 37155812  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||||||||||||||||| ||||||||||    
T  37155813 catcttaagtctaacgtgccagaatttca 37155841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 17279953 - 17279730
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttacttttatgc 125  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  17279953 actacactagtggatttccttcctggcttggtatcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccttttac-tttatgc 17279855  T
Q  126 tttg---tgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaacatc 221  Q
    ||||   | ||||  ||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||| | | ||||||    
T  17279854 tttgaattttttttcttgtcttgtggtagcttagtgttcgaaacattttattcaacatttgtttctgtataacttgtgttgaaacatcgcacataacatc 17279755  T
Q  222 ttaagtctaacgtgtcagaatttca 246  Q
     ||||||||||||| ||||||||||    
T  17279754 gtaagtctaacgtgccagaatttca 17279730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 17880826 - 17881057
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc-cagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17880826 aataagaactacactagtggatttccttcttggcttggtagccccccagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgccatttac 17880925  T
Q  118 ttttatgctttgtgt-tttatttgtct--ttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtata 214  Q
    |||| || ||||| | |||| ||||||  ||||||||||| ||||| |||||| || |||||||| ||||| ||| ||| |||| ||| ||||||| |||    
T  17880926 ttttttg-tttgtttctttacttgtctgcttgttagcttaatgttccaaacatattgttcaacatttgtttttgtgtaattggtgttgcaacatcgcata 17881024  T
Q  215 gaacatcttaagtctaacgtgtcagaatttcac 247  Q
    ||||||| |||  |||||||  | |||||||||    
T  17881025 gaacatcctaaagctaacgttcctgaatttcac 17881057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 33466247 - 33466348
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||    
T  33466247 aataaggactacactagtggattttcttcctggcttggtagcccccagagtaggtgacgttgcaccgaactggattaacaaactctctgtgcctttttct 33466346  T
Q  119 tt 120  Q
    ||    
T  33466347 tt 33466348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 23249806 - 23249705
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| ||||||    
T  23249806 aataaggactacactagtggatttccttcttggcttggtagcccccagagtaggtgacgttgcaccgaattgggttaacaaactcgttgtgccttttact 23249707  T
Q  119 tt 120  Q
    ||    
T  23249706 tt 23249705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 1684047 - 1683948
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||   |||||| ||||||    
T  1684047 aataaggactacactagtggatttcct-cctggcttggtagcgcc-agagtaggtgacgttgcaccgaattgggttaacaaacttcttgtgccttttact 1683950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 8726916 - 8726853
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgca 82  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8726916 aatatggactacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttgca 8726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 12814679 - 12814734
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12814679 aataaggactacactagtgaatttccttcctggcttggtagcccccagagtaggtg 12814734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 24092029 - 24091938
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||   ||| ||||||||| ||| ||||||||| |||||    
T  24092029 aataaggactacactagtggatttccttcctggcttggtagcccctagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtg 24091938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 1562457 - 1562537
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaac 101  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||   ||| | |||||||||||||||||||    
T  1562457 aaggactacactagtggatttccttcctggcttggtagcccccaaagtaggtgtgtttgtcgccgaactgggttaacaaac 1562537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 23864554 - 23864657
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||| ||||||| ||||||| |||||||| |||||||| |||||||| || |||||||| ||||  |||||||| ||||     
T  23864554 aataaggactacactagtggattttcttcctgacttggtatcccccagatgtaggtgatgttgcaccaaattgggttaaaaaaccttctgtgccttttaa 23864653  T
Q  118 tttt 121  Q
    ||||    
T  23864654 tttt 23864657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 45133729 - 45133634
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttacttt 120  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||   ||| ||||||||||||| |||||||||  |||| | ||||||||    
T  45133729 actacactagtggatttccttcctggcttgatagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcaatgtgtcctttacttt 45133634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 24850519 - 24850603
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||| ||||  || ||||||||||||||||||    
T  24850519 aataaggactacactagtggatttccttcctagcttggtagcccccatatgtaggtga-gttgtgccaaactgggttaacaaactc 24850603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 33977130 - 33977045
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||   |||  |||||||||||| |||||||||    
T  33977130 aataaggactacactagtggatttcctttctgacttggtagcccccagagtaggtgcgtttgttaccgaactgggtcaacaaactc 33977045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 22476302 - 22476247
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||    
T  22476302 aataaggactacactagtggatttccttcctggcttggtagccctcaaagtaggtg 22476247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 24384633 - 24384582
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagta 70  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  24384633 aataaggactacactagtggattttcttcctggcttggtagcccccagagta 24384582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 9996571 - 9996469
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||| ||||| ||||| |||||| |||||||| | ||||||||||||   ||| ||||||||||||||||||||||  ||||| | |||||    
T  9996571 aataaggactacaatagtggatttcattcctgacttggtagtctccagagtaggtgtgtttgtcaccgaactgggttaacaaacttgctgtgtcttttac 9996472  T
Q  118 ttt 120  Q
    |||    
T  9996471 ttt 9996469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 23541498 - 23541583
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||| |||||||||||| |||||||||| || ||||||||||||||||||||||   ||| ||||||||| ||| |||||||||    
T  23541498 aataagtactacactagtggatttccttcccggtttggtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactc 23541583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 33961833 - 33961748
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||| |||||||||||||  |||||||||||| | ||||||||||||||||||||||  |||  |||||||||||| |||||||||    
T  33961833 aatacggactacactagttgatttccttcctgacgtggtagcccccagagtaggtgagtttgttaccgaactgggtcaacaaactc 33961748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 24482376 - 24482308
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||| || |||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  24482376 tagtgaatttccttcttgacttgttagcccccagatgtaggtgacgttgcaccaaactgggttaacaaa 24482308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 12240305 - 12240211
Alignment:
Q  24 ggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||||||||| | ||||||||||||| ||||||||| || |||||||||   ||| ||||||||||||||||||||    |||||||||||||    
T  12240305 ggactacactagcggatttccttcctggtttggtagcctccggagtaggtgtgtttgtcaccgaactgggttaacaaataacctgtgccatttac 12240211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 20254970 - 20255072
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||  ||   ||| ||||||||||||| |||||||| ||  |||| |||||    
T  20254970 aataaggaccacactagtggatttccttcctagcttggtagcccccatagtacatgtgtttgtcaccgaactgggtcaacaaactgtcgctgccttttac 20255069  T
Q  118 ttt 120  Q
    |||    
T  20255070 ttt 20255072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 25240477 - 25240375
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||   |||||||   ||| ||||||||||||| |||||||||  ||| || |||||    
T  25240477 aataaggactacactggtggatttccttcctggtttggtagcccccttggtaggtgtgtttgtcaccgaactgggtaaacaaactcaatgtaccttttac 25240378  T
Q  118 ttt 120  Q
    |||    
T  25240377 ttt 25240375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 11221373 - 11221445
Alignment:
Q  38 tatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    |||||||||||||| ||||||||||||||||||||||   ||| ||||||||| ||| ||||||||| |||||    
T  11221373 tatttccttcctggtttggtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtg 11221445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 22874250 - 22874206
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  22874250 aataaggactacactagtggatttccttcctagcttggtagcccc 22874206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 8726854 - 8726772
Alignment:
Q  97 caaactctctgtgccatttacttttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacat 179  Q
    ||||||| |||| || |||||||| ||||||||  ||||  ||||||| ||||||||| |||||||||||||||||||||||||    
T  8726854 caaactcactgtcccttttacttt-atgctttgcatttttcttgtcttatgttagcttggtgttcgaaacattttattcaacat 8726772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 13660458 - 13660513
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||| ||||||||||||| ||||| ||||| | ||||||||||||||||||||||    
T  13660458 aataaagactacactagtggatttctttcctagtttggtagcccccagagtaggtg 13660513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 13719101 - 13719156
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||| ||||||||||||| ||||| ||||| | ||||||||||||||||||||||    
T  13719101 aataaagactacactagtggatttctttcctagtttggtagcccccagagtaggtg 13719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 18753954 - 18753875
Alignment:
Q  21 taaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    |||||||||||||| |||||||||||| ||||||| ||||||  ||||||||||   ||| || ||||||||||||||||    
T  18753954 taaggactacactactgtatttccttcttggcttgatagcccttagagtaggtgtatttgtcatcgaactgggttaacaa 18753875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 32179365 - 32179295
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaact 102  Q
    ||||| |||| ||||||  ||| |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  32179365 tagtgaattttcttcctaactttgtagcctccagacgtaggtgaagttgcaccgaactgggttaacaaact 32179295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 9031468 - 9031695
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||    
T  9031468 aataaggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactcattgtgctttttact 9031567  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| || ||||||||| |||| ||||    
T  9031568 tttatgctttgcgtttttcttgtctttgttagcttagtgttcgaaacatttcactcaacatctgtttttgtataacttgtgttgaaacattgtatggaac 9031667  T
Q  219 atcttaagtctaacgtgtcagaatttca 246  Q
    ||||||||||||||||| ||||||||||    
T  9031668 atcttaagtctaacgtgccagaatttca 9031695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 9036779 - 9036550
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| || ||||||| |  |||    
T  9036779 aataaggactacactagtggatttccttcctggtttggtagcccccagagtatgtgatgttgcaccgaactgggttaacaaattcactgtgccttccact 9036680  T
Q  119 tttatgctttgtgttttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaac 218  Q
    |||||||||||  ||||  |||||||| ||||||||||||||||||||||| | |||||||||| || ||||||||| || |||||||||||||||||||    
T  9036679 tttatgctttgcatttttcttgtctttattagcttagtgttcgaaacatttcactcaacatctgattttgtataacttgtgttgaaacatcgtatagaac 9036580  T
Q  219 atcttaagtctaacgtgtcagaatttcaca 248  Q
    ||||||||||||||||| ||||||||||||    
T  9036579 atcttaagtctaacgtgccagaatttcaca 9036550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 8749111 - 8748884
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||||||||| ||||||||||| ||||||||| ||||||||||| | ||||||||| ||| ||||||||||||||| || |||| ||||||    
T  8749111 aatacggactacactagtggatttccttcctagcttggtagtccccagagtagctaacgttgcactgaattgggttaacaaactcactatgccctttact 8749012  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    || ||||||||  ||||  || |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  8749011 tt-atgctttgcatttttcttttcttgtgttagcttagtgttcgaaacattttattcaacatttgtttctgtataacttgtgttgaaacatcgtatagaa 8748913  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||| ||||||||| ||| ||||||||||    
T  8748912 catcgtaagtctaatgtgccagaatttca 8748884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 13913862 - 13913773
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtg 109  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13913862 aataaggagtacactagcggatttcct-cctggcttggtagcccccagagtaggtgacgttgcaccgaaccgggttaacaaactctctgtg 13913773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 13917914 - 13917825
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtg 109  Q
    |||||||| ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13917914 aataaggagtacactattggatttccttc-tggcttggtagcccccagagtaggtgacgttgcaccgaattgggttaacaaactctctgtg 13917825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 20748249 - 20748334
Alignment:
Q  17 tcaataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  20748249 tcaataaggactacactagtggatttccttcctggcttggtag-ccccaaagtaggtgatgttgcaccgaactgggttaacaaactc 20748334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 7479224 - 7479314
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgc 110  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |||||    
T  7479224 aataaggactacactagtggatttcct-cctggcttggtagcccccagattaggcgacgttgcaccgaactgagttaacaaactctttgtgc 7479314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 295532 - 295441
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||| ||||||||||||| ||||||||| |||||    
T  295532 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtg 295441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 11656092 - 11656010
Alignment:
Q  20 ataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaact 102  Q
    |||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  11656092 ataaggactacactagtgaatttctttcctgacttggtagcctccagagtaggtgacattgcaccaaactgggttaacaaact 11656010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 18477001 - 18476901
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||  |||||||||||||||||||||| |||||| |||||    
T  18477001 aataaggactacactagtggatttccttcctggcttggtag-ccccagatgtaggtga-gttgtgccgaactgggttaacaaactctttgtgccttttac 18476904  T
Q  118 ttt 120  Q
    |||    
T  18476903 ttt 18476901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 7496015 - 7496116
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||| | |||| || |||||||||||||| ||||||||||||| |||||  ||||||    
T  7496015 aataaggactacactagtggatttcct-cctggcttgatagcccccaaattaggcgatgttgcaccgaactgagttaacaaactctttgtgctttttact 7496113  T
Q  119 ttt 121  Q
    |||    
T  7496114 ttt 7496116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 8224911 - 8224810
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||   || ||||||||||||||||| | |||||| |||||    
T  8224911 aataaggactacactagtggatttccttcctggcttggtagcccccagatgtaggtga-gttttgccaaactgggttaacaaactttgtgtgccttttac 8224813  T
Q  118 ttt 120  Q
    |||    
T  8224812 ttt 8224810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 18034982 - 18035084
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||   ||| |||||||||||||||||||||||  |||| | |||||    
T  18034982 aataaggactacactagtggatttccttcctggcttggtagcctcaagagtaggtgtgtttgtcaccgaactgggttaacaaactcattgtgtcttttac 18035081  T
Q  118 ttt 120  Q
    |||    
T  18035082 ttt 18035084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 12054535 - 12054635
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||| ||  ||||||| ||  |||||||| |||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  12054535 aataaggactacacttgtagatttcct-ccgagcttggtatcccctagagtaggtgacattgcaccgaactgggttaagaaactcactgtgccatttact 12054633  T
Q  119 tt 120  Q
    ||    
T  12054634 tt 12054635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 15635960 - 15636045
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||| ||||||||||||| | |||||||    
T  15635960 aataaggactacactagtgaatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcatcaaactc 15636045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 17702478 - 17702393
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||   ||| ||||||||||||| |||||||||    
T  17702478 aataaggactacactagtggatttccttcctggcttggtagcccccagagtagttgtgtttgtcaccgaactgggtcaacaaactc 17702393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 18064292 - 18064394
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||   ||| |||||||||||||||||||||||  |||| | |||||    
T  18064292 aataaggactacactagtggatttccttcctgccttggtagcctctagagtaggtgtgtttgtcaccgaactgggttaacaaactcattgtgtcttttac 18064391  T
Q  118 ttt 120  Q
    |||    
T  18064392 ttt 18064394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 6580953 - 6581054
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||   ||| ||||||||||||||||||||||   |||||| |||||    
T  6580953 aataaggactacactagtggatttccttgctggcttggtagccttcagagtaggtgtgtttgtcaccgaactgggttaacaaacttgttgtgccttttac 6581052  T
Q  118 tt 119  Q
    ||    
T  6581053 tt 6581054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 13790751 - 13790666
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||   ||| ||||||||||||| |||||||||    
T  13790751 aataaggactacactagtatatttccttcttggcttggtagcccccatagtaggtgtgtttgtcaccgaactgggtcaacaaactc 13790666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 15686244 - 15686337
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgcc 111  Q
    |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||   ||| || |||||||||| |||||||||| ||||||    
T  15686244 aataaggactacactaatggatttccttcctggcttggtagcccctagagtaggtgtgtttgtcatcgaactgggtcaacaaactctatgtgcc 15686337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 18547720 - 18547635
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||   ||| ||||||| ||||| |||||||||    
T  18547720 aataaggactacactattggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaattgggtcaacaaactc 18547635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 28051208 - 28051123
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||   ||| |||| |||||||| |||||||||    
T  28051208 aataaggactacactattggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccaaactgggtcaacaaactc 28051123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 10082375 - 10082443
Alignment:
Q  34 agtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  10082375 agtgaatttccttcctagcttggtagcccctagatgtaggtgacgttgcaccgaactgggttaacaaac 10082443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 11558405 - 11558496
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgc 110  Q
    |||| ||| |||||||||| ||||||||||||||||||||||| ||| ||||||||  |||| ||||||||| ||||||||||||||||||||    
T  11558405 aatacggattacactagtggatttccttcctggcttggtagcctccatagtaggtg-tgttgtcaccgaacttggttaacaaactctctgtgc 11558496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 11567674 - 11567765
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgc 110  Q
    |||| ||| |||||||||| ||||||||||||||||||||||| ||| ||||||||  |||| ||||||||| ||||||||||||||||||||    
T  11567674 aatacggattacactagtggatttccttcctggcttggtagcctccatagtaggtg-tgttgtcaccgaacttggttaacaaactctctgtgc 11567765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 10189299 - 10189368
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| ||||||||||| ||||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  10189299 tagtgaatttccttcctagcttggtagcccctacatgtaggtgacgttgcaccgaactgggttaacaaac 10189368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 17042840 - 17042924
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaact 102  Q
    ||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||   ||| |||| |||||| ||||||||||    
T  17042840 aataaggactacactagtggatttccttcctgccttggtagcctccagagtaggtgtgtttgtcaccaaactggtttaacaaact 17042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 19531970 - 19532025
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19531970 aataaggacgacactagtggatttccttcctggcttggtagcccccaaagtaggtg 19532025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 3552300 - 3552381
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    |||||||||||||||| || |||| |||||||||||||||||||| ||||||||||   ||| ||||||||||| |||||||    
T  3552300 aataaggactacactactggattttcttcctggcttggtagccccaagagtaggtgcgtttgtcaccgaactggattaacaa 3552381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 24195595 - 24195511
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg-acgttgcaccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    || ||||||||||||| |||||||||    
T  24195595 aataaggactacactagtggatttccttcttggcttggtag-ccccagagtaggtgtgtttttcaccgaactgggtcaacaaactc 24195511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 8531450 - 8531382
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccagag-taggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||||||| |||||||||  ||| |||||| ||||||||||||||||||||||||||||||||    
T  8531450 tagtggatttcctttctggcttggatgccaccagaggtaggtgacgttgcaccgaactgggttaacaaa 8531382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 13524768 - 13524852
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactc 103  Q
    |||||||||||||| |||| ||||||||| || |||||||||||||||||||||||   |   |||||||||||| |||||||||    
T  13524768 aataaggactacaccagtggatttccttcttgacttggtagcccccagagtaggtgttttgtgaccgaactgggtcaacaaactc 13524852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 19633958 - 19633915
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagccc 62  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  19633958 aataaggactacactagtggatttccttcctggcttggtagccc 19633915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 21094788 - 21094842
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  21094788 aataaggactacactagtgaatttccttcctgacttggtag-ccccagagtaggtg 21094842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 980452 - 980506
Alignment:
Q  20 ataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||    
T  980452 ataaggactacactagtggatttccttccttgcttggtagcccccaaaataggtg 980506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 21719012 - 21719054
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcc 61  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  21719012 aataaggactacactagtggatttccttcctggcttggtagcc 21719054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 14406722 - 14406799
Alignment:
Q  25 gactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaac 101  Q
    ||||||| | ||| |||||||||||||||||||||||| || ||||||||   ||| |||||||||||||||||||||    
T  14406722 gactacattggtggatttccttcctggcttggtagcccacaaagtaggtgtgtttgtcaccgaactgggttaacaaac 14406799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 20976090 - 20976147
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaact 89  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  20976090 tagtggatttccttcctggtttggtagcccccagatgtaggtgaagttgcaccgaact 20976147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 23954644 - 23954729
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||| ||||| |||| || ||||||||||||||||||||||| ||||||||||||   ||| ||||||||||| | |||||||||    
T  23954644 aataatgactaaactaatggatttccttcctggcttggtagcctccagagtaggtgtgtttgccaccgaactggatcaacaaactc 23954729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 31649762 - 31649682
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||   ||| ||||||||||| |||||||    
T  31649762 aataaggactacacgagtggatttccttcctggcttggtag-acccagagtaggtgtgtttgtcaccgaactggattaacaa 31649682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 8147641 - 8147709
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||||||||||||||||||| |||   |||||| ||||||||||| ||||||||||||    
T  8147641 tagtgaatttccttcctggcttggtagcccctagataaaggtgaagttgcaccgaattgggttaacaaa 8147709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 42243831 - 42243780
Alignment:
Q  51 gcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  42243831 gcttggtagccccaagatgtaggtgatgttgcaccgaactgggttaacaaac 42243780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 286979 - 287069
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgt 108  Q
    ||||||||||| ||||||| ||||||||||||| ||||||| ||||| |||| |||   ||| || |||||| ||||||||||||| ||||    
T  286979 aataaggactatactagtggatttccttcctggtttggtagtccccatagtaagtgtgtttgtcatcgaactaggttaacaaactcactgt 287069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 44452552 - 44452467
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||| |||||||||||| |||||||||||||||||| |||||| ||| |||||||   ||| ||||||||||||| |||||||||    
T  44452552 aataagaactacactagtggatttccttcctggcttgg-agcccctagacgtaggtgtgtttgtcaccgaactgggtcaacaaactc 44452467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 246
Target Start/End: Original strand, 11558606 - 11558637
Alignment:
Q  215 gaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||||||||||||||||||||||||||||    
T  11558606 gaacatcttaagtctaacgtgtcagaatttca 11558637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 246
Target Start/End: Original strand, 11567875 - 11567906
Alignment:
Q  215 gaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||||||||||||||||||||||||||||    
T  11567875 gaacatcttaagtctaacgtgtcagaatttca 11567906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 43902141 - 43902202
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||||||||||| |||||||| | |||||||||||||||||||| ||| ||||||||    
T  43902141 atttctttcctggcttgg-agcccccaaatgtaggtgacgttgcaccgaattggattaacaaa 43902202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 15962330 - 15962262
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| ||||||||||| |||||||||||   ||| ||||||||| |||||||||| |||||||||||||    
T  15962330 tagtgaatttccttcctagcttggtagcctt-agatgtaggtgacattgcaccgaagtgggttaacaaac 15962262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 40199922 - 40199885
Alignment:
Q  58 agcccccagagtaggtgacgttgcaccgaactgggtta 95  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  40199922 agcccccagagtaggttacgttgcaccgaactaggtta 40199885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 1919323 - 1919367
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    |||||||||||||  |||| ||||||||| |||||||||||||||    
T  1919323 aataaggactacatcagtggatttccttcttggcttggtagcccc 1919367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 19584010 - 19584078
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||| |||||||||||||   |||| ||| ||||||||| |||||| ||||||||||||||||    
T  19584010 tagtggattttcttcctggcttggattcccctagatgtaggtgacattgcactgaactgggttaacaaa 19584078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 2e-77; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 45599416 - 45599645
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| ||||||| ||||||    
T  45599416 aatacggactacattagtggatttccttcctggcttggtagccccgagagtaggtgacgttgcaccgaattgagttaacaaactcactgtgccttttact 45599515  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    || ||||||||  ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  45599516 tt-atgctttgcatttttcttgtcttgtgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactcgtgttgaaacatcgtatagaa 45599614  T
Q  218 catcttaagtctaacgtgtcagaatttcaca 248  Q
    |||| |||||||| |||| ||||||||||||    
T  45599615 catcgtaagtctatcgtgccagaatttcaca 45599645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 40313310 - 40313537
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||  |||||     
T  40313310 aatacggactacactagtggatttccttcctggcttggtagccccctgagtaggtaacgttgcactgaactgggttaacaaactcactgtgcattttac- 40313408  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||||||||  ||||  ||||||| |||||||||  ||||||||| |||||||| || |||| |||||||||||||  | ||||||||||| ||||||    
T  40313409 tttatgctttgcattttccttgtcttgtgttagcttcatgttcgaaatattttatttaatatctatttctgtataacttatgttgaaacatcgcatagaa 40313508  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||| ||||||||||||| ||||||||||    
T  40313509 catcgtaagtctaacgtgccagaatttca 40313537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 52436907 - 52437135
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||  ||||||| |||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  52436907 aataaggactgtactagtggattttcttcctgactcggtagcctccagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgacttttact 52437006  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    ||| || ||  ||||||| ||||||| |||||||||| ||||| |||||| || |||||||||| ||||||| ||| |||| |||||||||||   ||||    
T  52437007 tttctgtttattgttttacttgtcttatgttagcttaatgttccaaacatattgttcaacatctatttctgtgtaattggtgttgaaacatcgcgaagaa 52437106  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||  ||| ||||||||| ||||||||||    
T  52437107 cattgtaaatctaacgtgccagaatttca 52437135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 33062457 - 33062218
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||    
T  33062457 aataaggactacactagtggatttcctttctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactcactatgccattttct 33062358  T
Q  119 tttatg------ctttgtgttttatttg-tctttgttagcttagtgttcgaaacattttattcaacatc--tgtttctgtataactggtattgaaacatc 209  Q
    || |||       ||| |||| |  ||| | | |||||||||| |||||  | | ||||||||||||||  | ||||||| ||| |||| ||| ||||||    
T  33062357 ttcatgtctgttatttttgttatccttgttatctgttagcttaatgttctgatctttttattcaacatctatttttctgtgtaattggtgttggaacatc 33062258  T
Q  210 gtatagaacatcttaagtctaacgtgtcagaatttcacat 249  Q
    |  ||||||||||||||||||||||| |||||||||||||    
T  33062257 gcgtagaacatcttaagtctaacgtgccagaatttcacat 33062218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 17038318 - 17038236
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaact 102  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17038318 aataaggactacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaact 17038236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 23478021 - 23478123
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||| ||| ||||| ||| ||||||||| |||||||||||||    
T  23478021 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcactgaactaggtcaacaaactcactgtgccatttac 23478120  T
Q  118 ttt 120  Q
    |||    
T  23478121 ttt 23478123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 17012009 - 17011924
Alignment:
Q  161 gaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  17012009 gaaacatttcattcaacatctgtttctgtataacttgtgttgaaacatcgtataaaacatcttaagtttaacgtgccagaatttca 17011924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 15804197 - 15804296
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||   ||| ||| ||||||||||||||||||| |||||||||||||    
T  15804197 aataaggactacactagtgaattttcttcctggcttggtagcccccatagtaggtgtgtttgtcactgaactgggttaacaaactcgctgtgccatttac 15804296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 17379709 - 17379790
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  17379709 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17379790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 4246107 - 4246022
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  4246107 aataaggactacactagtggatttccttcctgtcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 4246022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 17012074 - 17012013
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg 80  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  17012074 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgatgttg 17012013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 26972487 - 26972572
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  26972487 aataaggactacactagtggatttccttactggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 26972572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 14745869 - 14745971
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||   ||| |||||| |||||| ||||||||| |||||  ||||||    
T  14745869 aataaggactacactagtggattttcttcctggcttggtagcccccagagttggtgtgtttgtcaccgagctgggtcaacaaactcgctgtgttatttac 14745968  T
Q  118 ttt 120  Q
    |||    
T  14745969 ttt 14745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 18390200 - 18390294
Alignment:
Q  28 tacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttactttt 121  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||   ||| ||||||||||||||||||||    |||||||||||||||||    
T  18390200 tacactagtggatttccttactggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaaatcacctgtgccatttactttt 18390294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 17355917 - 17355998
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  17355917 aataaggactacactggtggatttccttccaggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17355998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 49086692 - 49086761
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  49086692 tagtgaatttctttcctggcttggtagcccccacatgtaggtgacgttgcaccgaactgggttaacaaac 49086761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 11667949 - 11668004
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  11667949 aataaggactacactagtagatttccttcctggcttggtagcccccagagtaggtg 11668004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 17851459 - 17851550
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||   ||| ||||||||| ||| ||||||||| |||||    
T  17851459 aataaggactacactagtggatttccttcttggcttagtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtg 17851550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 10340243 - 10340345
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg-acgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||| ||||||| ||||| |||||||||||| ||| ||||||||||||||||||| || |   |||||||||||| |||||||| |||||||| |||||    
T  10340243 aataaagactacaatagtggatttccttcctgacttagtagcccccagagtaggtgtacttgttaccgaactgggtcaacaaactttctgtgccttttac 10340342  T
Q  118 ttt 120  Q
    |||    
T  10340343 ttt 10340345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 12753133 - 12753031
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgtt-gcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||   ||  ||||||||||||||||||||||   |||||| |||||    
T  12753133 aataaggactacgctagtggatttacttcctggcttggtagcctccagagtaggtgtgtttctcaccgaactgggttaacaaacttgttgtgccttttac 12753034  T
Q  118 ttt 120  Q
    |||    
T  12753033 ttt 12753031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 1973385 - 1973300
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| |   ||| ||||||||||||| |||||||||    
T  1973385 aataaggactacactagtggatttccttcctgacttggtatcccccagagtaggagtgtttgtcaccgaactgggtcaacaaactc 1973300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 20859641 - 20859711
Alignment:
Q  31 actagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||   ||| ||||||||||||| ||||||    
T  20859641 actagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 20859711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 47941426 - 47941527
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||| || ||| ||||| |||||| |||||||| ||||  ||||| ||||||||||||||  ||||||| |||||    
T  47941426 aataaggactacactagtggatttccttcttgactttgtagctcccagatgtaggtga-gttgtgccgaattgggttaacaaacttactgtgccttttac 47941524  T
Q  118 ttt 120  Q
    |||    
T  47941525 ttt 47941527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 41330891 - 41330987
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||| ||||||||||  ||| ||||||||||| |||||||||| ||||||||   ||| ||||||||||||| |||||||||| |||||| |||||    
T  41330891 aaggattacactagtggttttacttcctggcttagtagcccccaaagtaggtgtgtttgtcaccgaactgggtcaacaaactctttgtgccttttac 41330987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 20841351 - 20841394
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagccc 62  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  20841351 aataaggactacactagtggatttccttcctggcttggtagccc 20841394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 51472179 - 51472230
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagta 70  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  51472179 aataaggactacactagtggatttccttcttggtttggtagcccccagagta 51472230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 50057579 - 50057518
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggt 93  Q
    ||||| |||||||||||| |||||||||||||||| |||||||| ||||||| |||||||||    
T  50057579 tagtggatttccttcctgacttggtagcccccagatgtaggtgaagttgcactgaactgggt 50057518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 13165466 - 13165422
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  13165466 aataaggactacactagtggatttccttcctagcttggtagcccc 13165422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 8281993 - 8281911
Alignment:
Q  18 caataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    |||||||||||||| |||||  |||||||||||||||||| ||| || |||||||||   ||| ||||||||| |||||||||    
T  8281993 caataaggactacaatagtgggtttccttcctggcttggtcgcctccggagtaggtgtgtttgtcaccgaactaggttaacaa 8281911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 23600515 - 23600584
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| |||| |||| || |||||||||| ||||| |||||||| ||||||||||||| |||||||||||    
T  23600515 tagtgaattttcttcttgccttggtagcctccagatgtaggtgaagttgcaccgaactaggttaacaaac 23600584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 16137669 - 16137899
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||  |||||| ||||||    
T  16137669 aataaggactacactagtggatttccttcctggcttggtagccctcagagtaggtgacgttgcatcaaactgggttaacaaactcattgtgccttttact 16137768  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    || ||||||||  ||||  ||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||| || ||||||||||||||||||    
T  16137769 tt-atgctttgcatttttcttgtcttgtgttagcttagtgttcgaaacatttcattcaacatctatttttgtataacttgtgttgaaacatcgtatagaa 16137867  T
Q  218 catcttaagtctaacgtgtcagaatttcacat 249  Q
    |||| ||||||||||||| |||||||||||||    
T  16137868 catcgtaagtctaacgtgccagaatttcacat 16137899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 19216024 - 19215798
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  19216024 aatacggactacactagtggatttccttcctggcttggtatccct-agagtaggtgacgttgcaccgaactgggttaacaaactcaatgtgccttttact 19215926  T
Q  119 tttatgctttgtgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||  || |||  |||   ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||||    
T  19215925 tttc-gcgttgcatttctcttgtcttgtgttagcttagtgttcgaaacattttattcaacatctgtttctctataacttgtgttgaaacatcgcatagaa 19215827  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||| |||||||||| || ||||||||||    
T  19215826 catcgtaagtctaacatgccagaatttca 19215798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 15038419 - 15038194
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| | |||||     
T  15038419 aatacggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttgcaccaaactgggttaacaaactcactgtgtcttttac- 15038321  T
Q  119 tttatgctttg--tgttttatttgtctt-tgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatag 215  Q
    ||  |||||||  | ||||  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||  |||     
T  15038320 ttcgtgctttgcttttttttcttgtcttgtgttagcttagtgttcgaaacattttattcaacatatgtttctgtataacttgtgttgaaacatcacataa 15038221  T
Q  216 aacatcttaagtctaacgtgtcagaat 242  Q
    |||||| ||||||||||||| ||||||    
T  15038220 aacatcgtaagtctaacgtgccagaat 15038194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 20558373 - 20558283
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtg 109  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  20558373 aataagggctacactagtggatttccttcctggcttggtagcctccagactaggtgacgttgcaccgaactgggttaacaaactcactgtg 20558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 15003250 - 15003351
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||    
T  15003250 aataaggactacactagtggatttccttcatggcttggtatccaccagagtaggtgacattgcaccgaactgggttaacgaactcactgtgccattttct 15003349  T
Q  119 tt 120  Q
    ||    
T  15003350 tt 15003351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 16309445 - 16309545
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  16309445 aataaggactatactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttgcactgaactgggttaacaaacttcctgtgccttttact 16309543  T
Q  119 tt 120  Q
    ||    
T  16309544 tt 16309545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 9384685 - 9384589
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccattt 115  Q
    ||||||||||||||||||| |||||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||||||||||| |||||||||||    
T  9384685 aataaggactacactagtggatttccttcctgacttggtagccaccagaataggcgacgttgtaccgaactgggttaacaaactcactgtgccattt 9384589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 20003208 - 20003107
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||| |||||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||  |||||||||| ||    
T  20003208 aataagaactacactagttgatttccttcctggcttggtagcccctaaagtaggtgacgttgcaccgaactgggttcacaaactcattgtgccattttct 20003109  T
Q  119 tt 120  Q
    ||    
T  20003108 tt 20003107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 28623600 - 28623499
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||  |||||||||||||||||||||||| |||| |||||    
T  28623600 aataaggactacactagtttatttccttcctggcttggtagcccctagatgtaggtga-gttgtgccgaactgggttaacaaactctctctgccttttac 28623502  T
Q  118 ttt 120  Q
    |||    
T  28623501 ttt 28623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 15007424 - 15007524
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    |||||| |||||||||||| ||||||||| |||||||||| |||| |||||||||||| ||||| |||||||||||||||||||| ||||||| ||| ||    
T  15007424 aataagtactacactagtggatttccttcatggcttggtatcccc-agagtaggtgactttgcatcgaactgggttaacaaactcactgtgcctttttct 15007522  T
Q  119 tt 120  Q
    ||    
T  15007523 tt 15007524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 34657239 - 34657329
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||  |||||||||||||||||||||||||||    
T  34657239 aataaggactacactagtggatttccttcttggcttggtagcccctagatgtaggtga-gttgtgccgaactgggttaacaaactctctgtg 34657329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 15897761 - 15897846
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  15897761 aataaggactacactagtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 15897846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 12444807 - 12445040
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgc-cattta 116  Q
    |||| |||||||||||||| | ||||||||| ||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||| |||   ||||    
T  12444807 aatacggactacactagtggagttccttcctagcttggtagcctccagagtaggtg-tgttgtcaccgaactgggttaacaaactctctatgctttttta 12444905  T
Q  117 cttttatgc---tttgtgt---tttatttgtctttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcg 210  Q
    ||||| |||   |||  ||   ||| |||   |||||||||||| || || || | ||| ||||||||||    | ||| |||||||| ||| ||||| |    
T  12444906 cttttctgcctgtttccgttcatttgttttcttttgttagcttaatgctctaatc-tttaattcaacatcgtaatttgtttaactggtgttggaacattg 12445004  T
Q  211 tatagaacatcttaagtctaacgtgtcagaatttca 246  Q
     |||||||||||||||||||||||||||||||||||    
T  12445005 catagaacatcttaagtctaacgtgtcagaatttca 12445040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 26965658 - 26965760
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||   ||| ||||||||||||| |||||||| | |||||| |||||    
T  26965658 aataaggactacactagtggatttccttcctgacttgatagcctccagagtaggtgtgtttgtcaccgaactgggtcaacaaactgtttgtgccttttac 26965757  T
Q  118 ttt 120  Q
    |||    
T  26965758 ttt 26965760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 33665865 - 33665763
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||   ||| ||||||||| ||| |||||||||  ||||  ||||||    
T  33665865 aataaggactacactagtggatttccttcctggcttagtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttatttac 33665766  T
Q  118 ttt 120  Q
    |||    
T  33665765 ttt 33665763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 21323361 - 21323453
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaactctctgtgcc 111  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||| | |||||||| ||||  ||||| |||||||||||||||||||||||    
T  21323361 aataaggactacactagtggatttccttcctgatttggtagcccccaaatgtaggtga-gttgtgccgaattgggttaacaaactctctgtgcc 21323453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 24501896 - 24501812
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaact 102  Q
    ||||||||||||||||||| |||||||| |||||||||||||| | ||||||||||   ||| ||||||||||||||||||||||    
T  24501896 aataaggactacactagtggatttcctttctggcttggtagcctctagagtaggtgtgtttgtcaccgaactgggttaacaaact 24501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 9281796 - 9281851
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  9281796 aataaggactacactagtggatttccttccaggcttggtagcccccagagtaggtg 9281851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 20989852 - 20989954
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||    || ||||||||||||| |||||||||  ||||  ||||||    
T  20989852 aataaggactacactagtggatttcctttctgacttggtagcccccagagtaggtgtgtctgtcaccgaactgggtcaacaaactcattgtgttatttac 20989951  T
Q  118 ttt 120  Q
    |||    
T  20989952 ttt 20989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 25782875 - 25782793
Alignment:
Q  27 ctacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgt 108  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||   ||| ||||||||||||||||||||||| ||||    
T  25782875 ctacactagtggatttccttactggcttggtagcctccagagtaggtgtgtttgtcaccgaactgggttaacaaactcactgt 25782793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 14258982 - 14258897
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgtt-gcaccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||   ||  ||||||||||||| |||||||||    
T  14258982 aataaggactacactagtggatttccttcctcgcttggtagcccccaaagtaggtgtgtttctcaccgaactgggtcaacaaactc 14258897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 17855266 - 17855181
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||   ||| |||||| |||||| |||||||||    
T  17855266 aataaggactacactagtggatttccttcctggcttgatagcctccagagtaggtgtgtttgtcaccgatctgggtcaacaaactc 17855181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 20470290 - 20470375
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||   ||| | ||||||||||| |||||||||    
T  20470290 aataaggagtacactagtggatttccttcctggcttggtagcctccagagtaggtgtgattgtcgccgaactgggtcaacaaactc 20470375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 23882781 - 23882866
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  23882781 aataaagactacactagtggatttccttcctgatttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 23882866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 13195395 - 13195340
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  13195395 aataaggactacactagtggatttccttcatggcttggtagcccctagagtaggtg 13195340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 25805525 - 25805470
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  25805525 aataaggactacactagtggatttccttcctggcttggtagcctctagagtaggtg 25805470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 22885243 - 22885305
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||| ||||||||||||||    
T  22885243 atttccttcctggcttggatgcccccagatgtaggtgacgttgcaccgtactgggttaacaaa 22885305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 17864512 - 17864596
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaact 102  Q
    ||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||   ||| ||||||||| ||| ||||||||    
T  17864512 aataaggactacactagtggattttcttcctggattggtaacccccagagtaggtgtgtttgtcaccgaactaggtcaacaaact 17864596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 15003391 - 15003490
Alignment:
Q  148 tagcttagtgttcgaaacattttattcaacatctgttt-ctgtataactggtattgaaacatcgtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||| |||||  | ||| ||||||||||||||||| |||| |||||||| ||  |||||||| ||||| ||||||||||||| ||| ||||||||||    
T  15003391 tagcttaatgttctgatcatcttattcaacatctgttttctgtgtaactggtgtttgaacatcgtgtagaatatcttaagtctaatgtgccagaatttca 15003490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 15035086 - 15035184
Alignment:
Q  148 tagcttagtgttcgaaacattttattcaacatctgttt-ctgtataactggtattgaaacatcgtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    ||||||| |||||  | ||| ||||||||||||||||| |||| ||||||   ||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  15035086 tagcttaatgttctgatcatcttattcaacatctgttttctgtgtaactgtgtttgaa-catcgtgtagaacatcttaagtctaacgtgccagaatttca 15035184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 17527972 - 17528063
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| |||  ||| |||||||||||||||| | ||||||||   ||| ||| ||||||||||||||||||| |||||    
T  17527972 aataaggactacactagtggattaactttctggcttggtagccccaatagtaggtgtgtttgtcactgaactgggttaacaaactcactgtg 17528063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 20765081 - 20765160
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaac 97  Q
    ||||||||||||||||||| | || |||||||||||||| |||||||||||| |||   ||| |||||||||||||||||    
T  20765081 aataaggactacactagtggactttcttcctggcttggtcgcccccagagtaagtgtgtttgtcaccgaactgggttaac 20765160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 3904773 - 3904834
Alignment:
Q  39 atttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||||||||||||||||||||| |  ||||| |||||| ||||||||| ||||||||||    
T  3904773 atttccttcctggcttggtagccccaaacgtaggggacgtttcaccgaactaggttaacaaa 3904834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 17234663 - 17234578
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||| ||| |||||||||  |||||||||||||| ||||||||||   ||| |||| |||||||| |||||||||    
T  17234663 aataaggactacactggtggatttccttctgggcttggtagcccctagagtaggtgtgtttgtcaccaaactgggtcaacaaactc 17234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 13870453 - 13870493
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtag 59  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  13870453 aataaggactacactagtggatttccttcctggcttggtag 13870493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 21723496 - 21723543
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga 67  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  21723496 aataaggactacactagtggatttccttcctggcttgg-agcccccaga 21723543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25964766 - 25964722
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  25964766 aataaggactaccctagtggatttccttcctggcttggtagcccc 25964722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25969413 - 25969369
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  25969413 aataaggactaccctagtggatttccttcctggcttggtagcccc 25969369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25973853 - 25973809
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  25973853 aataaggactaccctagtggatttccttcctggcttggtagcccc 25973809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 32449199 - 32449092
Alignment:
Q  143 tttgttagcttagtgttcgaaacattttattcaacatctgttt--ctgtataactggtattgaaacatcgtatagaacatcttaagtctaacgtgtcaga 240  Q
    |||||||||||| |||||  | |||  ||||||||||||||||  || |||| ||  | ||| |||||||| |||||||||||||| |||||||| ||||    
T  32449199 tttgttagcttaatgttctgaccatagtattcaacatctgtttatctctatatctaatgttggaacatcgtgtagaacatcttaagactaacgtgccaga 32449100  T
Q  241 atttcaca 248  Q
    ||||||||    
T  32449099 atttcaca 32449092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 12039769 - 12039824
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    |||||||||||||||||   ||||||||||| ||||||||||||||| ||||||||    
T  12039769 aataaggactacactagaagatttccttcctagcttggtagcccccaaagtaggtg 12039824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 18152796 - 18152895
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttacttt 120  Q
    ||||||||| |||||| |||||||||||| |||||||||| ||| ||||||||   ||| ||| |||||||||||||||     ||||||||||||||||    
T  18152796 aaggactacgctagtggatttccttcctgccttggtagcctccatagtaggtgtgtttgtcactgaactgggttaacaattcagctgtgccatttacttt 18152895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 22903201 - 22903263
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    |||| |||||||||||||  | ||||||| |||||||||||||||||| ||||||||||||||    
T  22903201 attttcttcctggcttggatgtccccagatgtaggtgacgttgcaccgcactgggttaacaaa 22903263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 12464225 - 12464156
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    ||||| |||||||||||| || |||||| |||| | |||||||| |||||||||||||| ||||||||||    
T  12464225 tagtgaatttccttcctgactcggtagctcccacatgtaggtgaagttgcaccgaactgagttaacaaac 12464156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 29255003 - 29255087
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||   ||| ||| ||||||||| |||||||||    
T  29255003 aataaggactacactagtggattttcttcctggcttgatag-ccctagagtaggtgtgtttgccactgaactgggtcaacaaactc 29255087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 3357097 - 3357165
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||| ||||||||||||||| |||  |||||||| ||||||| || ||||||||||||    
T  3357097 tagtgaatttccttcttggcttggtagcccctagatataggtgacattgcacctaattgggttaacaaa 3357165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 13553409 - 13553349
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactggg 92  Q
    ||||| |||||||||||||| |||||||||||| | |||||||| |||||||| |||||||    
T  13553409 tagtgaatttccttcctggcatggtagcccccaaacgtaggtgatgttgcacccaactggg 13553349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 30425007 - 30424952
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    |||||| | ||||||| || ||||||||| ||||||||||||||| ||||||||||    
T  30425007 aataagaattacactaatggatttccttcttggcttggtagcccctagagtaggtg 30424952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 32449322 - 32449271
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagta 70  Q
    |||||||| ||||||| || ||||||||||||| ||||||||||| ||||||    
T  32449322 aataaggaatacactaatggatttccttcctggtttggtagcccctagagta 32449271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 1103417 - 1103474
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaa 96  Q
    ||||| ||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||    
T  1103417 atttctttcctggcttggtag-ccccagacgtaagtggcgttgcaccgaactgggttaa 1103474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 20003014 - 20002972
Alignment:
Q  204 aacatcgtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    |||||| | ||||||||||||||||||||||| ||||||||||    
T  20003014 aacatcatgtagaacatcttaagtctaacgtgccagaatttca 20002972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 22918046 - 22918108
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||||||||||||||  | || |||| |||||||||||||||||  ||||||||||||||    
T  22918046 atttccttcctggcttggatgtcctcagatgtaggtgacgttgcaccatactgggttaacaaa 22918108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 16176644 - 16176583
Alignment:
Q  41 ttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaac 101  Q
    |||||||||||||||||||||  |||| |||||||| || ||||  ||||||||||||||||    
T  16176644 ttccttcctggcttggtagcctgcagacgtaggtgaagtcgcactaaactgggttaacaaac 16176583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 17060 - 17288
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||| |||||   ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  17060 aataaggactacactagtggatttccttcctggattggttagccccatagtaggtgacgttgcaccgaactgggttaacaaactcactatgccatttact 17159  T
Q  119 tttatgctttgtgttttatttgtc-tttgttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgtatagaa 217  Q
    |||||| ||||||||||| ||||| |||||||||||| |||||||||||| | ||||||| ||||||| ||||||||| || ||||||||||||||| ||    
T  17160 tttatgttttgtgttttacttgtcttttgttagcttaatgttcgaaacatatcattcaacgtctgtttatgtataacttgtgttgaaacatcgtatataa 17259  T
Q  218 catcttaagtctaacgtgtcagaatttca 246  Q
    |||||||| ||||||||| ||||||||||    
T  17260 catcttaaatctaacgtgccagaatttca 17288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 53013 - 53112
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53013 aataaggactacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactcactgtgccatttact 53111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 18765747 - 18765651
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccattt 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  18765747 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactcactgggccattt 18765651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 13315053 - 13315289
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagccccc-agagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||||| || |||||||| |    
T  13315053 aataaggactacactagtggattttcttcctggcttagtagccccccatagtaggtgacattgcaccgaactgggttaacaaactcactttgccattttc 13315152  T
Q  118 ttt------tatgctttgtgtttta-tttgtctttgttagcttagtgttcgaaacattttattcaacatctgt-ttctgtataactggtattgaaacatc 209  Q
    |||      | |  ||| |||| || ||| | | |||||||||| |||||  | ||| |||||||||||| || |||||| |||||| | ||| ||||||    
T  13315153 tttcctgtctgttatttttgttatattttatatctgttagcttaatgttctgatcatcttattcaacatccgtgttctgtgtaactgatgttggaacatc 13315252  T
Q  210 gtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    |  ||||||||||||||||||||||| ||||||||||    
T  13315253 gcgtagaacatcttaagtctaacgtgccagaatttca 13315289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 29566083 - 29565850
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||    
T  29566083 aataaggactacactagtggatttccttcctggcttggtag-ccccagagtaggggacgttgcatcgaactgagttaacaaactcactgtgccattttct 29565985  T
Q  119 tttatgctttgtgttttatttgtcttt-------gttagcttagtgttcgaaacattttattcaacatctgtttctgtataactggtattgaaacatcgt 211  Q
    ||  ||  |  | ||||  || || ||       ||||||||| |||||  | ||| ||||||||||| | ||||||| |||||||| ||| |||||||     
T  29565984 ttcctgtctgttatttttgttatcctttttgtcggttagcttaatgttctgatcatcttattcaacatttttttctgtgtaactggtgttggaacatcgc 29565885  T
Q  212 atagaacatcttaagtctaacgtgtcagaatttca 246  Q
     || ||||||||||||||||||||  |||||||||    
T  29565884 gtaaaacatcttaagtctaacgtgctagaatttca 29565850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 19466610 - 19466712
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgtt-gcaccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||  |||||||||||||||| |||||| | |||||||||||    
T  19466610 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttatcaccgaactgggttaagaaactcaccgtgccatttac 19466709  T
Q  118 ttt 120  Q
    |||    
T  19466710 ttt 19466712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 15328380 - 15328299
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15328380 aataaggactacactaatggatttccttcttggcttggtagcccccagagtaggtaacattgcaccgaactgggttaacaaa 15328299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 36398882 - 36398967
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  36398882 aataaggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 36398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 23758697 - 23758612
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||   ||| ||||||||||||| |||||||||    
T  23758697 aataaggactacactagtggatttccttcctggcttggtagcccccagagtagttgtgtttgtcaccgaactgggtcaacaaactc 23758612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 12910561 - 12910470
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    ||| ||||||||||||| ||||||||| |||||    
T  12910561 aataaggactacacttgtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccgaactgggtcaacaaactcactgtg 12910470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 24790246 - 24790331
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  24790246 aataaggactactctagtggatttccttcctgacttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 24790331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 31587547 - 31587467
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||   ||| |||||||||||||||||||    
T  31587547 aataaggactacactagtggatttccttcctggcttggtag-ctccagagtaggtgtgtttgtcaccgaactgggttaacaa 31587467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 24317897 - 24317981
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttg-caccgaactgggttaacaaac 101  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||   ||| ||||||| |||||||||||||    
T  24317897 aataaggactacactagtggatttccttcctggcttggtaacccccagatgtaggtgtgtttgtcaccgaattgggttaacaaac 24317981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 26860384 - 26860432
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga 67  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26860384 aataaggactacactagtggatttccttcctggcttggtagcccccaga 26860432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 21250284 - 21250387
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaact-gggttaacaaactctctgtgccattta 116  Q
    ||||| ||||||||||  | ||||||||||| ||||||||||||||||||||||||   ||| ||||||||| |||| ||||||||| ||||||| ||||    
T  21250284 aataacgactacactaacggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactggggtcaacaaactcactgtgcctttta 21250383  T
Q  117 cttt 120  Q
    ||||    
T  21250384 cttt 21250387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 25347265 - 25347210
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  25347265 aataaggactacactagtgggtttcctttctggcttggtagcccccagagtaggtg 25347210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 12952540 - 12952462
Alignment:
Q  23 aggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 100  Q
    ||||||||||||||| |||||||||||| |||||||||| ||| ||||||||   ||| ||||||||||||||||||||    
T  12952540 aggactacactagtggatttccttcctgacttggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 12952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 21530457 - 21530355
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||     ||| ||||||||||| | |||||||||  ||||||||||||    
T  21530457 aataagaactacactagtggatttccttcttggcttggtagcccctagagtaggcatgtttgtcaccgaactggataaacaaactcgttgtgccatttac 21530358  T
Q  118 ttt 120  Q
    |||    
T  21530357 ttt 21530355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 27111151 - 27111071
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||   ||| |||||| ||||||||||||    
T  27111151 aataaggactacactagtggacttccttcctggcttggtag-ccccagagtaggtgtgtttgtcaccgatctgggttaacaa 27111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 20649647 - 20649727
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaac 101  Q
    |||||||||||||||| |||||||||||| ||| |||||||| ||||||||||   ||| | |||||||||||||||||||    
T  20649647 aaggactacactagtggatttccttcctgactttgtagcccctagagtaggtgtgtttgtccccgaactgggttaacaaac 20649727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 31067586 - 31067654
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||||||  ||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  31067586 tagtggatttccttcctgaattggtagcccccagacgtaggtgacgttgcaccaaactaggttaacaaa 31067654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 17363575 - 17363507
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||| |||||| ||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  17363575 tagtgaatttcattcctgacttggtaacccccagatgtaggtgaggttgcaccgaactgggtcaacaaa 17363507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 17395614 - 17395546
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||||||||||| ||||||||| |  |||| |||||||||||||||||||| ||||||    
T  17395614 tagtggatttccttcctggcttgatagcccccacacttaggcgacgttgcaccgaactgggtaaacaaa 17395546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 19198369 - 19198420
Alignment:
Q  22 aaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  19198369 aaggactacactagtggatttccttcctggcttgatag-ccccagagtaggtg 19198420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 22582485 - 22582394
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||   ||||||||   ||| || ||||||| || |||||||||||||||    
T  22582485 aataaggactacactagtgtattttcttccttgcttggtagctcctgtagtaggtgtgtttgtcatcgaactgagtcaacaaactctctgtg 22582394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 24283620 - 24283671
Alignment:
Q  23 aggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||  |||||||||||| |||||||||||||||| ||||||    
T  24283620 aggactacactagtagatttccttcctgacttggtagcccccagaataggtg 24283671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 20378326 - 20378387
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggt 93  Q
    ||||| |||| ||||||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  20378326 tagtgcattttcttcctggcttggtagctcccagatgtaggtgaagttgcaccgaaccgggt 20378387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 30947392 - 30947324
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||||||||||| |||||||||||| ||| |||||||| |||||||| |||| ||| ||||||    
T  30947392 tagtgaatttccttcctgacttggtagcccctagatgtaggtgaagttgcaccaaactaggtcaacaaa 30947324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 45550098 - 45550031
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||| |||||||||||| |||||| ||| |||||||| ||||||||||||| ||||||||||    
T  45550098 tagtggatttcgttcctggcttgg-agcccctagatgtaggtgatgttgcaccgaacttggttaacaaa 45550031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 20476668 - 20476715
Alignment:
Q  23 aggactacactagtgtatttccttcctggcttggtagcccccagagta 70  Q
    |||||||||| |||| ||||||||||| ||||||||||||||| ||||    
T  20476668 aggactacaccagtgaatttccttcctagcttggtagcccccaaagta 20476715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 25867224 - 25867173
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaact 89  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||| ||||    
T  25867224 atttccttcctggcctggtagcctccagatgtaggtgacgttgcaccaaact 25867173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 18765553 - 18765511
Alignment:
Q  204 aacatcgtatagaacatcttaagtctaacgtgtcagaatttca 246  Q
    |||||||  ||||||||||||||||||||||| ||||||||||    
T  18765553 aacatcgcgtagaacatcttaagtctaacgtgccagaatttca 18765511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 20475367 - 20475409
Alignment:
Q  23 aggactacactagtgtatttccttcctggcttggtagccccca 65  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||    
T  20475367 aggactacactagtgaatttctttcctggcttggttgccccca 20475409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 28645773 - 28645830
Alignment:
Q  40 tttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaa 96  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||| ||||| ||||||    
T  28645773 tttccttcctgacttggtatcccccggatgtaggtgacgttgcacagaacttggttaa 28645830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 8163074 - 8163142
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| |||| ||||||| |||||||||||| ||| ||| ||||| ||||| ||||||| |||||||||    
T  8163074 tagtggattttcttcctgacttggtagccccaagacgtacgtgacattgcatcgaactgtgttaacaaa 8163142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 18593598 - 18593566
Alignment:
Q  68 gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||||||| |||||||||||||||||||||||    
T  18593598 gtaggtgacattgcaccgaactgggttaacaaa 18593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 36369 - 36268
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||    
T  36369 aataaggactacactagtggattttcttcctggcttggtagcccccagagtaggtgacgttgcaccgaactggattaacaaactctctgtgcctttttct 36270  T
Q  119 tt 120  Q
    ||    
T  36269 tt 36268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 103177 - 103075
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtgccatttact 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||| ||||| |    
T  103177 aataaggactacactagtggatttccttcctggcttggtagcccctagagtaggtgacgttgcactgaactgggttaacaaactcactatgctatttaat 103078  T
Q  119 ttt 121  Q
    |||    
T  103077 ttt 103075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 16301 - 16391
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||||    
T  16301 aataaggactacactagtggatttccttcctggcttggtagcccccaaagtggttgacgttgcaccgaactgggttaacaaactcactgtg 16391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 37077 - 36992
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||   ||| ||||||||||||| |||||||||    
T  37077 aataaggactacactagtggatttccttcctggcttggtagcctccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 36992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 40406 - 40316
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||  |||| ||| ||||||||| ||||||||| |||||    
T  40406 aataaggactacactagtggatttccttcctagcttggtagcccccagagtaggtg-tgttgtcactgaactgggtcaacaaactcactgtg 40316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 50179 - 50281
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||   ||| ||||||||||||| |||||||||  ||||  ||||||    
T  50179 aataaggactacactagtggatttccttcctgacttggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttac 50278  T
Q  118 ttt 120  Q
    |||    
T  50279 ttt 50281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 61561 - 61662
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||||  ||   ||| ||||||||||||| |||||||||  ||||| ||||||    
T  61561 aataagaactacactagtggatttccttcttggcttggtagcccccagagta-atgtgtttgtcaccgaactgggtcaacaaactcattgtgctatttac 61659  T
Q  118 ttt 120  Q
    |||    
T  61660 ttt 61662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 7627 - 7718
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||   ||| ||||||||| ||| ||||||||| |||||    
T  7627 aataaggactacactagtgaatttccttcctggcttggtagcccctagagtaagtgtgtttgtcaccgaactaggtcaacaaactcactgtg 7718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 18213 - 18299
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtag-cccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||   ||| ||||||||| ||| |||||||||    
T  18213 aataaggactacactagtggatttccttcttggcttcgtagccccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactc 18299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 27607 - 27693
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtag-cccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||   ||| ||||||||| ||| |||||||||    
T  27607 aataaggactacactagtggatttccttcttggcttcgtagccccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactc 27693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 26476 - 26385
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||   ||| ||||||| ||||| ||||||||| |||||    
T  26476 aataaggactacactagtggatttccttccttgcttggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcactgtg 26385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 25761 - 25863
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccatttac 117  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||   ||| ||||||||||||| || ||||||  ||||  ||||||    
T  25761 aataaggactacaccagtggatttccttcctggcttggtagctcccagagtaggtgtgtttgtcaccgaactgggtcaataaactcattgtgttatttac 25860  T
Q  118 ttt 120  Q
    |||    
T  25861 ttt 25863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 3187 - 3111
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaact 102  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||  |||| ||||||||||| ||||||||||    
T  3187 actacactagtggatttccttcctggcttggtagcctccagagtaggtg-tgttgtcaccgaactggattaacaaact 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 17365 - 17420
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  17365 aataaggactacactagtggattttcttcctgacttggtagcccccagagtaggtg 17420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 16712 - 16803
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtg 109  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||   ||| |||||||||| || ||||||||| |||||    
T  16712 aataaggactacagtagtggatttcctttctggcttggtagcccccggagtaggtgtgtttgtcaccgaactgagtcaacaaactcactgtg 16803  T

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Target: scaffold0088 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 36664 - 36609
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtg 74  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  36664 aataaggactacactagtggatttccttcctagcttggtagcctccagagtaggtg 36609  T

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Target: scaffold0072 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 18607 - 18540
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccagagtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||| ||||||    
T  18607 tagtggatttccttcatggcttggtagccccaaaagtaggtgaagttgcaccgaactgggtcaacaaa 18540  T

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Target: scaffold0015 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 202467 - 202416
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagta 70  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  202467 aataaggactacactagtggatttccttcctgacttggtagcccccagagta 202416  T

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Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 2185 - 2247
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  2185 atttctttcctggcttggtagcccccagatgtaggtgaagttgcaccgaactgggtgaacaaa 2247  T

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Target: scaffold0505 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 10124 - 10204
Alignment:
Q  20 ataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa 99  Q
    |||||||||||||||||| |||||||| ||| |||||||||||| |||||| |||   ||| |||||||||||||||||||    
T  10124 ataaggactacactagtggatttcctttctgacttggtagccccaagagtaagtgtatttgtcaccgaactgggttaacaa 10204  T

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Target: scaffold0423 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 13672 - 13581
Alignment:
Q  26 actacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactctctgtgccattta 116  Q
    ||||||||| || |||| |||||||||||||||||||| ||||||||||   ||| ||||||||||| |||||||||   ||||||||||||    
T  13672 actacactaatgaattttcttcctggcttggtagcccctagagtaggtgtgtttgtcaccgaactggattaacaaacctcctgtgccattta 13581  T

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Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 110344 - 110395
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagta 70  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  110344 aataaggactacactagtggatttccttcctgacttggtagcccctagagta 110395  T

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Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 10030 - 9969
Alignment:
Q  33 tagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggt 93  Q
    ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||||||||||    
T  10030 tagtgaatttccttcctggctttgtagcccccagatgtaggttaggttgcaccgaactgggt 9969  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 37437 - 37393
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccc 63  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  37437 aataaggactacactagtggatttccttcctgacttggtagcccc 37393  T

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Target: scaffold0520 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 5490 - 5388
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaa-actctctgtgccattta 116  Q
    ||||||||||||||||||| |||||||| ||| |||   |||||| ||||||||||   ||| |||||||||||||||||||  |||| |||||||||||    
T  5490 aataaggactacactagtggatttcctttctgacttaacagcccctagagtaggtgtgtttgtcaccgaactgggttaacaattctct-tgtgccattta 5392  T
Q  117 cttt 120  Q
    ||||    
T  5391 cttt 5388  T

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Target: scaffold0333 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 5717 - 5636
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 100  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| ||| ||||||||||   ||| ||||||||||||| ||||||    
T  5717 aataaggactacacttgtggatttccttccttgcttggtag-ccctagagtaggtgtgtttgacaccgaactgggtcaacaaa 5636  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 8760 - 8822
Alignment:
Q  39 atttccttcctggcttggtagcccccaga-gtaggtgacgttgcaccgaactgggttaacaaa 100  Q
    |||| |||||||||||||  | ||||||| |||||||||||||||||| ||||||||||||||    
T  8760 attttcttcctggcttggatgtccccagatgtaggtgacgttgcaccgtactgggttaacaaa 8822  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 87807 - 87722
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccaga-gtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    ||||||||||||||||||| ||||||||||| |||||| |||||||| | |||||||   ||| ||||||||||||| |||||||||    
T  87807 aataaggactacactagtggatttccttcctagcttgg-agcccccatacgtaggtgtgtttgtcaccgaactgggtcaacaaactc 87722  T

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Target: scaffold0185 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 2446 - 2531
Alignment:
Q  19 aataaggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 103  Q
    |||||||||||||||| || | ||||||||||||||| ||||||| | ||||||||   ||| ||||||| ||||| |||||||||    
T  2446 aataaggactacactattggacttccttcctggcttgatagcccctaaagtaggtgtgcttgtcaccgaaatgggtcaacaaactc 2531  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 3694 - 3650
Alignment:
Q  55 ggtagcccccaga-gtaggtgacgttgcaccgaactgggttaaca 98  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||    
T  3694 ggtagcccccagacgtaggtgacgttgcactgaactcggttaaca 3650  T

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