View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18444_low_35 (Length: 291)
Name: NF18444_low_35
Description: NF18444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18444_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 2305787 - 2306045
Alignment:
| Q |
17 |
agtatcaacaagattaattggttgtttcaaataaaatcatcaaagattatgccaaaatttaactcattatataacacttaatatggagaggaaagaaaga |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2305787 |
agtatcaacaagattaattggttgtttcaaataaaatcatcaaagattatgtcaaaatttaactcattatataacacttaatatggagaggaaagaaaga |
2305886 |
T |
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| Q |
117 |
aaatcctttgctatattttataatacatcaatgttacaaccaataatttataataaccatgaacttgaagataaaatatttttacacatatgtcataatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2305887 |
aaatcctttgctatattttataatacatcaatgttacacccaataatttataataaccatgaacttgaagataaaatatttttacacatatgtcataatt |
2305986 |
T |
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| Q |
217 |
caaattttactataaaacagtaatattattttttgaagtaactatataaatgtaatatt |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2305987 |
caaattttactataaaacagtaatattattttttgaagtaactatataaatgtaatatt |
2306045 |
T |
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