View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18445_low_10 (Length: 222)
Name: NF18445_low_10
Description: NF18445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18445_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 4647819 - 4648023
Alignment:
| Q |
1 |
actctaagattccaaggcaataccaccacacctacccaactgcgttttctcttggctaaatttgaattttaaaatatgattaaggttaactcaatcaaca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
4647819 |
actctaagattccaaggcaataccaccacacctacccaactgcgttttctcttggctaaaattgaattttaaaatatgattaaggttaactcaatcaaca |
4647918 |
T |
|
| Q |
101 |
tcactaaaattgtaatagcttacctcccctcccattaaaaaagacccaattttggggagcaaatattaagtttgtgagagattttgtttcccacgtattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||| |
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| T |
4647919 |
tcactaaaattgtaatagcttacctcccctcccattaaaaaagacccaatttcggggagcaaatattgagtttgtgagagattttgtgtcccacttattc |
4648018 |
T |
|
| Q |
201 |
cctct |
205 |
Q |
| |
|
||||| |
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| T |
4648019 |
cctct |
4648023 |
T |
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