View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18446_high_8 (Length: 237)
Name: NF18446_high_8
Description: NF18446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18446_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 36287393 - 36287631
Alignment:
| Q |
16 |
atatatcacttaaaatgttttcgtgacatctcattttacatgtgactctcaacaataattatatttttaaaatacatatgacaaattttggagagactaa |
115 |
Q |
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| T |
36287393 |
atatatcacttaaaacgttttcgtgacatctcattttacatatgactctcaacaataattatatttttaaaatacatatgacaaattttggagagactaa |
36287492 |
T |
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| Q |
116 |
ac-----------------tcaaattcactcattacagtgagatgaaaagggcatttaatcagacaatttacatggctgtattatatgatcggtagtaaa |
198 |
Q |
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|| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36287493 |
actcaaattcactcatttatcaaattcactcattacagtgagatgaaaaagacatttaatcagacaatttacatggctgtattatatgatcggtagtaaa |
36287592 |
T |
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| Q |
199 |
aacnnnnnnnctttcatgagaaaacatggtctaagcccc |
237 |
Q |
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| T |
36287593 |
aactttttttctttcatgagaaaacatggtctaagcccc |
36287631 |
T |
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