View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18447_low_11 (Length: 242)
Name: NF18447_low_11
Description: NF18447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18447_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 37512915 - 37513092
Alignment:
| Q |
40 |
caaaggataaattattgaactttttaatgttatacgaataatattgcacnnnnnnnctcaaaggtatcatactcatttgatgttcaacaagaaaaccagt |
139 |
Q |
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| T |
37512915 |
caaaggataaattattgaactttttaatgttatacgaataatattgcacaaaaaaactcaaaggtatcatactcatttgatgttcaacaagaaaaccagt |
37513014 |
T |
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| Q |
140 |
taaaaattttactcttaagttaattgaacataaaaagttggattattcaataagtttaaatgaatccattttggaaga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
37513015 |
taaaaattttactcttaagttaattgaacataaaaagttggattattcaataagttcaaatgaatccattttggaaga |
37513092 |
T |
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