View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18447_low_13 (Length: 224)

Name: NF18447_low_13
Description: NF18447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18447_low_13
NF18447_low_13
[»] chr3 (58 HSPs)
chr3 (1-219)||(14648233-14648451)
chr3 (43-146)||(2249221-2249324)
chr3 (43-146)||(45220967-45221070)
chr3 (43-143)||(5841140-5841240)
chr3 (153-219)||(31690814-31690880)
chr3 (153-218)||(31943336-31943401)
chr3 (151-219)||(8583509-8583577)
chr3 (151-219)||(10597976-10598044)
chr3 (151-219)||(13969076-13969144)
chr3 (151-219)||(13974551-13974619)
chr3 (151-219)||(14084425-14084493)
chr3 (151-219)||(14089826-14089894)
chr3 (151-219)||(49399367-49399435)
chr3 (152-219)||(24123405-24123472)
chr3 (151-219)||(18757206-18757273)
chr3 (151-219)||(20187561-20187628)
chr3 (86-141)||(16840344-16840399)
chr3 (151-217)||(11850905-11850970)
chr3 (89-142)||(11912309-11912362)
chr3 (89-142)||(51608665-51608718)
chr3 (43-95)||(41156-41208)
chr3 (151-219)||(12419259-12419326)
chr3 (1-48)||(41249-41296)
chr3 (1-48)||(5841281-5841328)
chr3 (43-95)||(10834946-10834998)
chr3 (43-95)||(11912449-11912501)
chr3 (43-95)||(12853368-12853420)
chr3 (43-95)||(14670048-14670100)
chr3 (43-95)||(16326046-16326098)
chr3 (43-95)||(16795525-16795577)
chr3 (44-95)||(3801992-3802043)
chr3 (152-218)||(8374118-8374182)
chr3 (44-95)||(14764801-14764852)
chr3 (1-48)||(16325958-16326005)
chr3 (1-48)||(16840120-16840167)
chr3 (44-95)||(18899475-18899526)
chr3 (44-95)||(20249855-20249906)
chr3 (1-48)||(45220879-45220926)
chr3 (44-95)||(54519619-54519670)
chr3 (152-186)||(10597950-10597984)
chr3 (45-95)||(12304196-12304246)
chr3 (153-218)||(38742812-38742877)
chr3 (43-95)||(4590165-4590217)
chr3 (43-95)||(8491737-8491789)
chr3 (43-95)||(8928872-8928924)
chr3 (43-95)||(13435840-13435892)
chr3 (114-146)||(16840460-16840492)
chr3 (1-48)||(2249133-2249180)
chr3 (9-48)||(11912542-11912581)
chr3 (44-95)||(29545944-29545995)
chr3 (45-95)||(9532280-9532330)
chr3 (153-219)||(12271601-12271667)
chr3 (43-95)||(16751906-16751958)
chr3 (43-95)||(16840208-16840260)
chr3 (43-95)||(17318514-17318566)
chr3 (43-91)||(18933360-18933408)
chr3 (43-91)||(30064411-30064459)
chr3 (152-219)||(54519950-54520015)
[»] scaffold2015 (1 HSPs)
scaffold2015 (1-219)||(402-620)
[»] chr6 (33 HSPs)
chr6 (1-219)||(14594624-14594842)
chr6 (1-219)||(7429325-7429543)
chr6 (43-146)||(9622918-9623020)
chr6 (43-143)||(28707833-28707933)
chr6 (151-219)||(24562176-24562244)
chr6 (153-208)||(23235146-23235201)
chr6 (89-142)||(1254037-1254090)
chr6 (151-219)||(5290384-5290451)
chr6 (151-219)||(26418909-26418976)
chr6 (89-142)||(34297916-34297969)
chr6 (1-48)||(23955484-23955531)
chr6 (86-141)||(25737775-25737830)
chr6 (152-215)||(25749618-25749680)
chr6 (1-48)||(28707974-28708021)
chr6 (43-95)||(23955391-23955443)
chr6 (44-95)||(27222854-27222905)
chr6 (45-95)||(12941243-12941293)
chr6 (152-215)||(12447377-12447438)
chr6 (43-95)||(18918585-18918637)
chr6 (43-91)||(23400704-23400752)
chr6 (43-95)||(23538003-23538055)
chr6 (43-95)||(34297777-34297829)
chr6 (1-48)||(9622830-9622877)
chr6 (153-219)||(94684-94750)
chr6 (53-95)||(1254181-1254223)
chr6 (153-219)||(8069883-8069949)
chr6 (2-48)||(25738007-25738053)
chr6 (45-95)||(28290901-28290951)
chr6 (153-186)||(5290359-5290392)
chr6 (169-218)||(17207933-17207982)
chr6 (3-48)||(34297691-34297736)
chr6 (43-95)||(2076308-2076360)
chr6 (152-219)||(17894702-17894767)
[»] chr5 (32 HSPs)
chr5 (4-219)||(43243725-43243940)
chr5 (43-143)||(19075863-19075963)
chr5 (43-146)||(31253215-31253318)
chr5 (151-219)||(20831672-20831740)
chr5 (153-219)||(24669209-24669274)
chr5 (153-219)||(24738978-24739043)
chr5 (153-219)||(24751747-24751812)
chr5 (153-204)||(27636094-27636145)
chr5 (89-142)||(36459430-36459483)
chr5 (151-219)||(1857718-1857786)
chr5 (151-219)||(21675686-21675754)
chr5 (1-48)||(33473848-33473895)
chr5 (42-95)||(22120595-22120648)
chr5 (43-95)||(33473936-33473988)
chr5 (1-48)||(19076004-19076051)
chr5 (44-95)||(19510484-19510535)
chr5 (152-218)||(23076477-23076541)
chr5 (152-218)||(23081925-23081989)
chr5 (152-218)||(23545047-23545111)
chr5 (44-95)||(28372087-28372138)
chr5 (1-48)||(31253127-31253174)
chr5 (44-95)||(37600014-37600065)
chr5 (43-95)||(15238122-15238174)
chr5 (44-95)||(22339034-22339085)
chr5 (44-95)||(22749183-22749234)
chr5 (1-48)||(36459663-36459710)
chr5 (44-95)||(38146424-38146475)
chr5 (44-95)||(41878657-41878708)
chr5 (153-219)||(18566478-18566544)
chr5 (41-73)||(9774984-9775016)
chr5 (43-95)||(10751839-10751891)
chr5 (43-95)||(36459570-36459622)
[»] chr1 (22 HSPs)
chr1 (1-160)||(20032138-20032297)
chr1 (43-146)||(11944965-11945068)
chr1 (43-146)||(43630997-43631100)
chr1 (43-146)||(11809954-11810065)
chr1 (151-219)||(23195691-23195759)
chr1 (151-219)||(21541950-21542018)
chr1 (151-219)||(42096118-42096186)
chr1 (43-95)||(22132103-22132155)
chr1 (151-219)||(24079419-24079486)
chr1 (1-48)||(636487-636534)
chr1 (1-48)||(11945109-11945156)
chr1 (44-95)||(16370947-16370998)
chr1 (1-48)||(43630909-43630956)
chr1 (153-219)||(4231081-4231147)
chr1 (153-219)||(24109243-24109308)
chr1 (4-48)||(11809869-11809913)
chr1 (43-95)||(21406275-21406327)
chr1 (43-95)||(41801283-41801335)
chr1 (43-91)||(20230143-20230191)
chr1 (43-95)||(39245175-39245227)
chr1 (43-95)||(39248730-39248782)
chr1 (43-95)||(41389669-41389721)
[»] scaffold0098 (2 HSPs)
scaffold0098 (1-146)||(34025-34170)
scaffold0098 (151-219)||(52853-52921)
[»] chr8 (40 HSPs)
chr8 (43-146)||(44494228-44494331)
chr8 (42-146)||(11252086-11252190)
chr8 (43-146)||(21967997-21968108)
chr8 (43-146)||(21980837-21980948)
chr8 (43-146)||(21985820-21985931)
chr8 (43-146)||(22009201-22009312)
chr8 (151-219)||(23824991-23825059)
chr8 (151-219)||(3697539-3697607)
chr8 (43-125)||(22000783-22000873)
chr8 (151-219)||(30767164-30767232)
chr8 (152-215)||(23653750-23653813)
chr8 (43-146)||(34950057-34950160)
chr8 (89-142)||(42561025-42561078)
chr8 (153-219)||(31418910-31418975)
chr8 (1-48)||(8414893-8414940)
chr8 (1-48)||(11774411-11774458)
chr8 (152-219)||(21930521-21930587)
chr8 (1-48)||(22009113-22009160)
chr8 (1-48)||(34950201-34950248)
chr8 (1-48)||(44494140-44494187)
chr8 (43-95)||(11774318-11774370)
chr8 (151-219)||(21281952-21282020)
chr8 (43-95)||(21328588-21328640)
chr8 (1-48)||(11252004-11252051)
chr8 (152-219)||(21839386-21839452)
chr8 (1-48)||(21980749-21980796)
chr8 (1-48)||(21985732-21985779)
chr8 (151-219)||(5239951-5240015)
chr8 (43-95)||(8414981-8415033)
chr8 (43-95)||(21386181-21386233)
chr8 (43-95)||(23427848-23427900)
chr8 (43-95)||(23913287-23913339)
chr8 (9-48)||(21967917-21967956)
chr8 (1-48)||(22000700-22000747)
chr8 (153-219)||(14746689-14746755)
chr8 (151-184)||(23825053-23825086)
chr8 (152-219)||(25701724-25701789)
chr8 (153-181)||(31412728-31412756)
chr8 (43-95)||(42560886-42560938)
chr8 (43-91)||(44385838-44385886)
[»] chr4 (33 HSPs)
chr4 (48-146)||(37839201-37839299)
chr4 (48-146)||(42597930-42598028)
chr4 (151-219)||(13452094-13452162)
chr4 (43-95)||(28384873-28384925)
chr4 (151-219)||(37881264-37881331)
chr4 (152-215)||(10977225-10977288)
chr4 (43-95)||(631752-631804)
chr4 (43-95)||(13813837-13813889)
chr4 (43-95)||(13818325-13818377)
chr4 (43-95)||(22634931-22634983)
chr4 (43-95)||(24048389-24048441)
chr4 (44-95)||(15533241-15533292)
chr4 (1-48)||(28384966-28385013)
chr4 (1-48)||(37839108-37839155)
chr4 (1-48)||(42597837-42597884)
chr4 (44-95)||(49549088-49549139)
chr4 (45-95)||(36036974-36037024)
chr4 (153-219)||(45959915-45959981)
chr4 (151-184)||(13452156-13452189)
chr4 (169-218)||(41404881-41404930)
chr4 (169-218)||(46045045-46045094)
chr4 (43-95)||(10711847-10711899)
chr4 (43-95)||(10925617-10925669)
chr4 (43-95)||(12422965-12423017)
chr4 (43-95)||(17052450-17052502)
chr4 (43-95)||(27532774-27532826)
chr4 (44-95)||(18211626-18211677)
chr4 (53-95)||(30145805-30145847)
chr4 (153-219)||(54845121-54845187)
chr4 (43-88)||(23996971-23997016)
chr4 (43-95)||(15223568-15223620)
chr4 (152-219)||(20889233-20889298)
chr4 (152-219)||(31664918-31664983)
[»] chr7 (44 HSPs)
chr7 (43-143)||(11394883-11394983)
chr7 (43-146)||(16185487-16185598)
chr7 (151-219)||(32771362-32771430)
chr7 (151-219)||(4279857-4279925)
chr7 (151-219)||(19616189-19616257)
chr7 (43-111)||(18301357-18301425)
chr7 (153-219)||(15086165-15086231)
chr7 (151-219)||(37244549-37244616)
chr7 (154-219)||(3327692-3327758)
chr7 (153-219)||(18958672-18958737)
chr7 (43-95)||(41283667-41283719)
chr7 (1-48)||(11394795-11394842)
chr7 (1-48)||(41283760-41283807)
chr7 (89-142)||(15212930-15212983)
chr7 (43-95)||(10607325-10607377)
chr7 (43-95)||(11660304-11660356)
chr7 (43-95)||(13891652-13891704)
chr7 (43-95)||(13892035-13892087)
chr7 (43-95)||(20486764-20486816)
chr7 (151-195)||(26294977-26295021)
chr7 (151-219)||(36306251-36306319)
chr7 (43-95)||(39268318-39268370)
chr7 (44-95)||(14420809-14420860)
chr7 (44-95)||(16005026-16005077)
chr7 (1-48)||(16185639-16185686)
chr7 (44-95)||(18606360-18606411)
chr7 (44-95)||(18871319-18871370)
chr7 (45-95)||(146522-146572)
chr7 (155-219)||(16952481-16952543)
chr7 (43-95)||(7520220-7520272)
chr7 (43-95)||(9752512-9752564)
chr7 (43-95)||(15213070-15213122)
chr7 (43-95)||(25928376-25928428)
chr7 (152-184)||(32771424-32771456)
chr7 (44-95)||(10897902-10897953)
chr7 (53-95)||(838148-838190)
chr7 (53-95)||(1203328-1203370)
chr7 (53-95)||(16109990-16110032)
chr7 (153-219)||(20019882-20019948)
chr7 (153-219)||(46174219-46174285)
chr7 (43-95)||(16582443-16582495)
chr7 (43-95)||(18424257-18424309)
chr7 (43-91)||(26291183-26291231)
chr7 (43-91)||(39721222-39721270)
[»] chr2 (20 HSPs)
chr2 (151-219)||(21133469-21133537)
chr2 (153-215)||(11465971-11466033)
chr2 (151-219)||(19649760-19649828)
chr2 (151-219)||(6744539-6744607)
chr2 (155-219)||(27367802-27367866)
chr2 (151-219)||(43693295-43693363)
chr2 (151-208)||(28971521-28971578)
chr2 (43-95)||(37379058-37379110)
chr2 (43-95)||(21074512-21074564)
chr2 (44-95)||(6481806-6481857)
chr2 (44-95)||(6485273-6485324)
chr2 (44-95)||(9240696-9240747)
chr2 (44-95)||(19663563-19663614)
chr2 (44-95)||(20260279-20260330)
chr2 (152-218)||(32911647-32911711)
chr2 (1-48)||(37379151-37379198)
chr2 (153-219)||(28292614-28292680)
chr2 (158-219)||(200535-200596)
chr2 (43-95)||(9784016-9784068)
chr2 (153-184)||(28971496-28971527)
[»] scaffold1584 (1 HSPs)
scaffold1584 (151-219)||(213-281)
[»] scaffold0815 (2 HSPs)
scaffold0815 (43-126)||(1-84)
scaffold0815 (1-48)||(125-172)
[»] scaffold0355 (1 HSPs)
scaffold0355 (153-219)||(1656-1722)
[»] scaffold0106 (1 HSPs)
scaffold0106 (151-219)||(38295-38363)
[»] scaffold0076 (2 HSPs)
scaffold0076 (151-219)||(30360-30428)
scaffold0076 (151-219)||(35761-35829)
[»] scaffold0016 (2 HSPs)
scaffold0016 (42-146)||(173229-173324)
scaffold0016 (1-48)||(173142-173189)
[»] scaffold0011 (1 HSPs)
scaffold0011 (151-219)||(174776-174844)
[»] scaffold0001 (4 HSPs)
scaffold0001 (86-146)||(163708-163768)
scaffold0001 (1-48)||(175481-175528)
scaffold0001 (153-219)||(512733-512799)
scaffold0001 (59-95)||(163588-163624)
[»] scaffold0104 (5 HSPs)
scaffold0104 (151-218)||(25932-25999)
scaffold0104 (151-184)||(25993-26026)
scaffold0104 (151-184)||(27375-27408)
scaffold0104 (152-184)||(26020-26052)
scaffold0104 (152-184)||(27402-27434)
[»] scaffold0034 (2 HSPs)
scaffold0034 (151-219)||(10322-10390)
scaffold0034 (151-215)||(17618-17682)
[»] scaffold0028 (2 HSPs)
scaffold0028 (151-219)||(52599-52667)
scaffold0028 (151-219)||(47194-47261)
[»] scaffold0120 (1 HSPs)
scaffold0120 (152-215)||(5346-5409)
[»] scaffold0326 (1 HSPs)
scaffold0326 (153-219)||(609-674)
[»] scaffold0293 (1 HSPs)
scaffold0293 (43-109)||(21344-21410)
[»] scaffold0599 (3 HSPs)
scaffold0599 (89-142)||(4003-4056)
scaffold0599 (43-95)||(4143-4195)
scaffold0599 (9-48)||(4236-4275)
[»] scaffold0348 (1 HSPs)
scaffold0348 (151-218)||(2813-2881)
[»] scaffold0188 (1 HSPs)
scaffold0188 (153-219)||(31791-31856)
[»] scaffold0420 (1 HSPs)
scaffold0420 (151-215)||(9900-9964)
[»] scaffold0679 (2 HSPs)
scaffold0679 (1-48)||(3182-3229)
scaffold0679 (43-88)||(3270-3315)
[»] scaffold1726 (1 HSPs)
scaffold1726 (151-219)||(92-159)
[»] scaffold0575 (1 HSPs)
scaffold0575 (43-95)||(6965-7017)
[»] scaffold0124 (1 HSPs)
scaffold0124 (43-95)||(25572-25624)
[»] scaffold0031 (1 HSPs)
scaffold0031 (43-95)||(37207-37259)
[»] scaffold0013 (1 HSPs)
scaffold0013 (43-95)||(74336-74388)
[»] scaffold1427 (1 HSPs)
scaffold1427 (44-95)||(222-273)
[»] scaffold0842 (1 HSPs)
scaffold0842 (44-95)||(5264-5315)
[»] scaffold0337 (1 HSPs)
scaffold0337 (44-95)||(10827-10878)
[»] scaffold0026 (1 HSPs)
scaffold0026 (44-95)||(109623-109674)
[»] scaffold0019 (1 HSPs)
scaffold0019 (152-218)||(143871-143935)
[»] scaffold0012 (1 HSPs)
scaffold0012 (44-95)||(224148-224199)
[»] scaffold0380 (1 HSPs)
scaffold0380 (43-95)||(3996-4048)
[»] scaffold0139 (1 HSPs)
scaffold0139 (43-95)||(23942-23994)
[»] scaffold0080 (2 HSPs)
scaffold0080 (43-95)||(28494-28546)
scaffold0080 (43-95)||(33959-34011)
[»] scaffold0029 (1 HSPs)
scaffold0029 (43-95)||(62844-62896)
[»] scaffold0395 (1 HSPs)
scaffold0395 (152-215)||(4329-4391)
[»] scaffold0327 (1 HSPs)
scaffold0327 (44-95)||(18845-18896)
[»] scaffold0169 (1 HSPs)
scaffold0169 (152-215)||(5836-5898)
[»] scaffold0015 (1 HSPs)
scaffold0015 (9-48)||(208657-208696)
[»] scaffold0279 (1 HSPs)
scaffold0279 (153-219)||(5921-5987)
[»] scaffold0109 (1 HSPs)
scaffold0109 (43-93)||(37202-37252)
[»] scaffold0560 (1 HSPs)
scaffold0560 (153-213)||(1218-1278)
[»] scaffold0142 (1 HSPs)
scaffold0142 (43-95)||(8744-8796)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 14648233 - 14648451
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14648233 gtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 14648332  T
Q  101 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14648333 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgcc 14648432  T
Q  201 atattgatgatgatgatgt 219  Q
    |||||||||||||||||||    
T  14648433 atattgatgatgatgatgt 14648451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 2249221 - 2249324
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  2249221 atgatgttacctatgagttattaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaagaagaagaattattg 2249320  T
Q  143 agtg 146  Q
    ||||    
T  2249321 agtg 2249324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 45220967 - 45221070
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  45220967 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactacggggatgttaaggagaattattattg 45221066  T
Q  143 agtg 146  Q
    ||||    
T  45221067 agtg 45221070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 5841240 - 5841140
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||| | |||||||| |||||||||||||    
T  5841240 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattg 5841141  T
Q  143 a 143  Q
    |    
T  5841140 a 5841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 31690814 - 31690880
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  31690814 gtgttgtcatgtcatttgcatgagtcggtgttgttggatgtaattgccatattgatgatgatgatgt 31690880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 31943401 - 31943336
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  31943401 gtgttgtcatgtcatttgcatgagtcggtgttgttggatgtaattgccatattgatgatgatgatg 31943336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 8583509 - 8583577
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  8583509 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 8583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 10597976 - 10598044
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  10597976 cggtgttatcatgtcatttgcatgagtcggtgtcgttggttgtaattgccatattgatgatgatgatgt 10598044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 13969076 - 13969144
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  13969076 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 13969144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 13974551 - 13974619
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  13974551 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 13974619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 14084493 - 14084425
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  14084493 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 14084425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 14089894 - 14089826
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  14089894 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 14089826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 49399435 - 49399367
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  49399435 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 49399367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 24123405 - 24123472
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  24123405 ggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 24123472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 18757206 - 18757273
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||||    
T  18757206 cggtgttgtcatgtcatttgcatgagtcggtattgttggttgtaaatgccat-ttgatgataatgatgt 18757273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 20187628 - 20187561
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||||||    
T  20187628 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgtcat-ttgatgatgatgatgt 20187561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 16840344 - 16840399
Alignment:
Q  86 tgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattatt 141  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  16840344 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattatt 16840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 11850905 - 11850970
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgat 217  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||    
T  11850905 cggtgttgtcatgtcatttgcatgagtcagtgttgttggttgtaattgccat-ttgatgatgatgat 11850970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 11912362 - 11912309
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  11912362 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 11912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 51608665 - 51608718
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  51608665 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 51608718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 41208 - 41156
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  41208 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 12419326 - 12419259
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||| |||||||||||||||||||||||||| || ||| ||| |||||| ||||||||||||||||    
T  12419326 cggtgttttcatgtcatttgcatgagtcggtgttgttagttataattgccat-ttgatgatgatgatgt 12419259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41296 - 41249
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41296 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 41249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5841328 - 5841281
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  5841328 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 5841281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 10834946 - 10834998
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  10834946 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 11912501 - 11912449
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  11912501 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 11912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 12853368 - 12853420
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  12853368 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 14670100 - 14670048
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  14670100 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14670048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 16326046 - 16326098
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||||||||||||||||||||||| || ||||||||||| ||||||    
T  16326046 atgaggttacctatgagttgttaaatgtacttgatgagggttatgtcaagttg 16326098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 16795577 - 16795525
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  16795577 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16795525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 3802043 - 3801992
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  3802043 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 3801992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 8374118 - 8374182
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||||||||||||||  |||||||||  |||| |||||||||| |||||||||| |||||||||||    
T  8374118 ggtgttgtcatgtcat--gcatgagtctttgttgttggttgtaattgccatattgttgatgatgatg 8374182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 14764801 - 14764852
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  14764801 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14764852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16325958 - 16326005
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||    
T  16325958 gtgtactcttacgttgtttatgttgatgagtatgacgaagttatgatg 16326005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16840120 - 16840167
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  16840120 gtgtactcttacgttgtttatgttgatgattatgatgatgttatgatg 16840167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 18899526 - 18899475
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  18899526 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18899475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 20249855 - 20249906
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  20249855 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45220879 - 45220926
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  45220879 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 45220926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 54519670 - 54519619
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  54519670 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 54519619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 10597950 - 10597984
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttat 186  Q
    |||||||||||||||||||||||||||||||||||    
T  10597950 ggtgttgtcatgtcatttgcatgagtcggtgttat 10597984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 12304246 - 12304196
Alignment:
Q  45 gatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  12304246 gatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12304196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 38742877 - 38742812
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||||||||||||||||||||||||   ||| ||| |||||| ||  ||||||||||||||||||    
T  38742877 gtgttgtcatgtcatttgcatgagtcttagttgttgattgtaattgttatattgatgatgatgatg 38742812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 4590165 - 4590217
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  4590165 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 4590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 8491737 - 8491789
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  8491737 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 8491789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 8928872 - 8928924
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || |  |||||||||||||||    
T  8928872 atgatgttatctatgagttgttaaatgtacttgatggtggttatgttaagttg 8928924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 13435892 - 13435840
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||||  |||||||||||||||||||| || || |||||||||||||||    
T  13435892 atgatgttatatatgagttgttaaatgtacttgatgatggttatgttaagttg 13435840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 16840460 - 16840492
Alignment:
Q  114 taaggggatgttaagaagaattattattgagtg 146  Q
    |||||||||||||||||||||||||||||||||    
T  16840460 taaggggatgttaagaagaattattattgagtg 16840492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2249133 - 2249180
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||||| || ||||||||||||||||| ||||||||||||    
T  2249133 gtgtactcttacgtggtctatgttgatgagtatgacgaggttatgatg 2249180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 11912581 - 11912542
Alignment:
Q  9 ttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  11912581 ttacgttgtttatgttgatgattatgatgatgttatgatg 11912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 29545944 - 29545995
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||| ||||||||||    
T  29545944 tgatgttatctatgagttgttaaatgtacttgatgatggttgtgttaagttg 29545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 9532330 - 9532280
Alignment:
Q  45 gatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||| ||||||||||||||||||||| || || ||||||||| |||||    
T  9532330 gatgttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 9532280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 12271601 - 12271667
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||  ||| ||| |||||| ||  |  ||||||||||||||||    
T  12271601 gtgttgtcatgtcatttgcatgagtcgtagttgttgattgtaattgttactttgatgatgatgatgt 12271667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 16751906 - 16751958
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || | |||||||||||||    
T  16751906 atgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 16751958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 16840208 - 16840260
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||| | || || |||||||||||||||    
T  16840208 atgattttatctatgagttgttaaatgtatttgatgatggttatgttaagttg 16840260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 17318514 - 17318566
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||| ||| ||||||||||||||||| || || |||||||||||||||    
T  17318514 atgaagttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 17318566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 18933360 - 18933408
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaa 91  Q
    ||||||||| |||||||||||||| |||||| || || |||||||||||    
T  18933360 atgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 18933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 30064459 - 30064411
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaa 91  Q
    ||||||||| |||||||||||||| |||||| || || |||||||||||    
T  30064459 atgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 30064411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 54520015 - 54519950
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||  |||||||||   ||| |||||||||  ||||| |||||||||||||||||    
T  54520015 ggtgttgtcatgtcat--gcatgagtcttagttgttggttgtagttgccacattgatgatgatgatgt 54519950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 402 - 620
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 100  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  402 gtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 501  T
Q  101 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  502 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgcc 601  T
Q  201 atattgatgatgatgatgt 219  Q
    |||||||||||||||||||    
T  602 atattgatgatgatgatgt 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 14594624 - 14594842
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 100  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14594624 gtgtactcttacgttgtttatgttgatgagtatgatgagggtatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 14594723  T
Q  101 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  14594724 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttgtttgttgtaaatgcc 14594823  T
Q  201 atattgatgatgatgatgt 219  Q
    |||||||||||||||||||    
T  14594824 atattgatgatgatgatgt 14594842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 7429543 - 7429325
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7429543 gtgtactcttacgttgtttatgttgatgagtatgatgaggttatggtgttacctatgagttgttaaatgtactcgaggggggttatgttaagttgtcttc 7429444  T
Q  101 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |    
T  7429443 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacagtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgtc 7429344  T
Q  201 atattgatgatgatgatgt 219  Q
    |||||||||||||||||||    
T  7429343 atattgatgatgatgatgt 7429325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 9622918 - 9623020
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9622918 atgatgttacctatgagttgttaa-tgtacttgatgagggttatgtaaagttgtcttctattcatgagcactaaggggatgttaagaagaattattattg 9623016  T
Q  143 agtg 146  Q
    ||||    
T  9623017 agtg 9623020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 28707933 - 28707833
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||| | |||||||| |||||||||||||    
T  28707933 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattg 28707834  T
Q  143 a 143  Q
    |    
T  28707833 a 28707833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 24562244 - 24562176
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  24562244 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 24562176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 23235146 - 23235201
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgat 208  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  23235146 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccatattgat 23235201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 1254090 - 1254037
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  1254090 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 1254037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 5290384 - 5290451
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  5290384 cggtgttatcatgtcatttgcatgagtcagtgttgttggttgtaattgccat-ttgatgatgatgatgt 5290451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 26418909 - 26418976
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||| |||||| ||||||||||||||||    
T  26418909 cggtgttgtcatgtcatttgcatgagttggtgttgttggttataattgccat-ttgatgatgatgatgt 26418976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 34297916 - 34297969
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  34297916 taagttgtcttctattcatgagtactaaggcgatgttaagaagaattattattg 34297969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23955531 - 23955484
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  23955531 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 23955484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 25737830 - 25737775
Alignment:
Q  86 tgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattatt 141  Q
    |||||||||||||||||||||||||   ||||||||||||| ||||||||||||||    
T  25737830 tgttaagttgtcttctattcatgagggctaaggggatgttatgaagaattattatt 25737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 25749680 - 25749618
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    ||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||    
T  25749680 ggtgttgtcatgtcatt-gcatgagtcgttgttgttggttgaaattgccatattgatgatgatg 25749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28708021 - 28707974
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  28708021 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 28707974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 23955443 - 23955391
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||| ||||||||||||||||||| || ||||||||||||||||||    
T  23955443 atgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 23955391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 27222905 - 27222854
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  27222905 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 27222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 12941293 - 12941243
Alignment:
Q  45 gatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  12941293 gatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 12941243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 12447377 - 12447438
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    ||||| ||||||||||  |||||||||  |||| ||||||||||||| ||||||||||||||||    
T  12447377 ggtgtcgtcatgtcat--gcatgagtctttgttgttggttgtaaatgtcatattgatgatgatg 12447438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 18918585 - 18918637
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  18918585 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 18918637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 23400752 - 23400704
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaa 91  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||    
T  23400752 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaa 23400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 23538055 - 23538003
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||  ||||||||||||||||||||| || || |||||||||||||||    
T  23538055 atgatgttgtctatgagttgttaaatgtacttgatgatggttatgttaagttg 23538003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 34297777 - 34297829
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| |  || |||||||||||||||    
T  34297777 atgatgttatctatgagttgttaaatgtacttgctgatggttatgttaagttg 34297829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9622830 - 9622877
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||||| |||||||||||||||||||| ||| ||||||||    
T  9622830 gtgtactcttacgtggtttatgttgatgagtatgacgagcttatgatg 9622877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 94684 - 94750
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||    || |||||||||  ||||| ||| |||||||||||||    
T  94684 gtgttgtcatgtcatttgcatgagtcttaattgttggttgtagttgccacattaatgatgatgatgt 94750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 1254223 - 1254181
Alignment:
Q  53 ctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||||||||||||||| || || |||||||||||||||    
T  1254223 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 1254181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 8069883 - 8069949
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| ||| |||||| ||  | |||||||||||||||||    
T  8069883 gtgttgtcatgtcatttgcatgagtcttagttgttgattgtaattgttacattgatgatgatgatgt 8069949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 25738053 - 25738007
Alignment:
Q  2 tgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    |||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  25738053 tgtactcttacgttggttatgttgatgattatgacgaggttatgatg 25738007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 28290901 - 28290951
Alignment:
Q  45 gatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||| |||| |||||||||||||||| || || |||||||||||||||    
T  28290901 gatgttatctataagttgttaaatgtacttgatgatggttatgttaagttg 28290951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 5290359 - 5290392
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttat 186  Q
    |||||||||||||| |||||||||||||||||||    
T  5290359 gtgttgtcatgtcagttgcatgagtcggtgttat 5290392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 17207933 - 17207982
Alignment:
Q  169 tgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||||||||  | || |||||||||| ||||||||||||||||||||||    
T  17207933 tgcatgagtctttattgttggttgtaattgccatattgatgatgatgatg 17207982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 34297691 - 34297736
Alignment:
Q  3 gtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||| ||||||||||||||||||||| ||||| || |||||||||    
T  34297691 gtactcttacgttgtttatgttgatgattatgacgatgttatgatg 34297736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 2076360 - 2076308
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||| | || || | |||||||||||||    
T  2076360 atgatgttatctatgagttgttaaatgtatttgatgatgattatgttaagttg 2076308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 17894702 - 17894767
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||  |||||||||   ||| |||||||||  ||||| |||||||||||||||||    
T  17894702 ggtgttgtcatgtcat--gcatgagtcttagttgttggttgtagttgccacattgatgatgatgatgt 17894767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 43243725 - 43243940
Alignment:
Q  4 tacttttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctat 103  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43243725 tactcttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctat 43243824  T
Q  104 tcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccata 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43243825 tcatgagcattaaggggatgttaagaagaattattattaagtgcatacggtgttgtcatgtcatttgcatgagtcgatgttgttggttgtaaatgccata 43243924  T
Q  204 ttgatgatgatgatgt 219  Q
    ||||||||||||||||    
T  43243925 ttgatgatgatgatgt 43243940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 19075963 - 19075863
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  19075963 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 19075864  T
Q  143 a 143  Q
    |    
T  19075863 a 19075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 31253215 - 31253318
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  31253215 atgaggttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattatcattg 31253314  T
Q  143 agtg 146  Q
    ||||    
T  31253315 agtg 31253318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 20831740 - 20831672
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||    
T  20831740 cggtgttgtcatgtcatttgcatgagtcggtgttgttggatgtaattgccatattgacgatgatgatgt 20831672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 24669209 - 24669274
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  24669209 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccat-ttgatgatgatgatgt 24669274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 24738978 - 24739043
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  24738978 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccat-ttgatgatgatgatgt 24739043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 24751747 - 24751812
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  24751747 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccat-ttgatgatgatgatgt 24751812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 27636094 - 27636145
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatat 204  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27636094 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccatat 27636145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 36459483 - 36459430
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  36459483 taagttgtcttctattcatgagtactaaggggatgttaagaaaaattattattg 36459430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 1857718 - 1857786
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||| |||||| | |||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  1857718 cggtgtggtcatgacctttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 1857786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 21675686 - 21675754
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||| |||||| | |||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  21675686 cggtgtggtcatgacctttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 21675754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33473848 - 33473895
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  33473848 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 33473895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 22120595 - 22120648
Alignment:
Q  42 tatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  22120595 tatgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 33473936 - 33473988
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||| ||||||||||||||||||| || ||||||||||||||||||    
T  33473936 atgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 33473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19076051 - 19076004
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  19076051 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 19076004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 19510535 - 19510484
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  19510535 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19510484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 23076477 - 23076541
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||| ||||||||||  |||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  23076477 ggtgtcgtcatgtcat--gcatgagtctttgttgttggttgtaattgccatattgatgatgatgatg 23076541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 23081925 - 23081989
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||| ||||||||||  |||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  23081925 ggtgtcgtcatgtcat--gcatgagtctttgttgttggttgtaattgccatattgatgatgatgatg 23081989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 23545047 - 23545111
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||| ||||||||||  |||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  23545047 ggtgtcgtcatgtcat--gcatgagtctttgttgttggttgtaattgccatattgatgatgatgatg 23545111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 28372087 - 28372138
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  28372087 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 28372138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31253127 - 31253174
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  31253127 gtgtactcttaccttgtttatgttgatgagtatgacgaggttatgatg 31253174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 37600014 - 37600065
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  37600014 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37600065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 15238122 - 15238174
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || | |||||||||||||    
T  15238122 atgatgttatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 22339085 - 22339034
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||| ||||    
T  22339085 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttacgttg 22339034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 22749234 - 22749183
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| |||||||| |||||||||||| || || |||||||||||||||    
T  22749234 tgatgttatctatgagtggttaaatgtacttgatgatggttatgttaagttg 22749183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36459710 - 36459663
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||| ||||| || |||||||||    
T  36459710 gtgtactcttacgttgtttatgttgatgattatgacgatgttatgatg 36459663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 38146424 - 38146475
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || | |||||||||||||    
T  38146424 tgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 38146475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 41878657 - 41878708
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || ||  ||||||||||||||    
T  41878657 tgatgttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 41878708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 18566544 - 18566478
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| ||||||||   ||| | |||||||||||||||||    
T  18566544 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtgggtgctacattgatgatgatgatgt 18566478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 9775016 - 9774984
Alignment:
Q  41 ttatgatgttacctatgagttgttaaatgtact 73  Q
    ||||||||||| |||||||||||||||||||||    
T  9775016 ttatgatgttatctatgagttgttaaatgtact 9774984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 10751891 - 10751839
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || | |||||||||||||    
T  10751891 atgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 10751839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 36459622 - 36459570
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| |||||||||||||||||||||  | || | |||||||||||||    
T  36459622 atgatgttatctatgagttgttaaatgtacttaatgatgattatgttaagttg 36459570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 20032138 - 20032297
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20032138 gtgtactcttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 20032237  T
Q  101 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatacggtgttgtc 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  20032238 tattcatgagcattaaggggatgttaagaagaattattattgagtgcatatggtgatgtc 20032297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 11945068 - 11944965
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  11945068 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 11944969  T
Q  143 agtg 146  Q
    ||||    
T  11944968 agtg 11944965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 43630997 - 43631100
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  43630997 atgaggttacctacgagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattg 43631096  T
Q  143 agtg 146  Q
    ||||    
T  43631097 agtg 43631100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 11809954 - 11810065
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg--------tcttctattcatgagcattaaggggatgttaagaagaat 134  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||||||        ||||||||||| |||||||||||||||||||||||||||    
T  11809954 atgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcacgagcattaaggggatgttaagaagaat 11810053  T
Q  135 tattattgagtg 146  Q
    || |||||||||    
T  11810054 taatattgagtg 11810065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 23195691 - 23195759
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  23195691 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgacatattgataatgatgatgt 23195759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 21542018 - 21541950
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  21542018 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 21541950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 42096118 - 42096186
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  42096118 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 42096186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 22132103 - 22132155
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  22132103 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22132155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 24079486 - 24079419
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||| ||||||||||||| ||||||||||||| ||| |||||| |||| | ||||||||||||||||    
T  24079486 cggtgtagtcatgtcatttgtatgagtcggtgttgttgtttgtaattgccct-ttgatgatgatgatgt 24079419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 636487 - 636534
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  636487 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 636534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11945156 - 11945109
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  11945156 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 11945109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 16370998 - 16370947
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  16370998 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16370947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43630909 - 43630956
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  43630909 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 43630956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 4231147 - 4231081
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| |||||||||  |||||  ||||||||||||||||    
T  4231147 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtagttgccaccttgatgatgatgatgt 4231081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 24109243 - 24109308
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||| |||||||||||||| || |||||||||  |||||| ||| ||||||||||||    
T  24109243 gtgttgtcatgtcagttgcatgagtcggtcttgttggttgtagttgccat-ttggtgatgatgatgt 24109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 11809869 - 11809913
Alignment:
Q  4 tacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||    
T  11809869 tactcttacgttggttatgttgatgagtatgacgaggttatgatg 11809913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 21406327 - 21406275
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  21406327 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21406275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 41801283 - 41801335
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || |||||||||||||||    
T  41801283 atgatattatctatgagttgttaaatgtacttgatgatggttatgttaagttg 41801335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 20230143 - 20230191
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaa 91  Q
    ||||||||| |||||||||||||| |||||| || || |||||||||||    
T  20230143 atgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 20230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 39245175 - 39245227
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || | |||||||||||||    
T  39245175 atgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39245227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 39248730 - 39248782
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || | |||||||||||||    
T  39248730 atgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 39248782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 41389669 - 41389721
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || | |||||||||||||    
T  41389669 atgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 41389721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 34170 - 34025
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttc 100  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |    
T  34170 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatgttacctatgagttgttaaatgtactcgaggagtgttatgttaggttgtctgc 34071  T
Q  101 tattcatgagcattaaggggatgttaagaagaattattattgagtg 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34070 tattcatgagcattaaggggatgttaagaagaattattattgagtg 34025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 52853 - 52921
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  52853 cggtgttgacatgtcatttgcatgagtcggtgttgttggttgtaattgccatattgatgatgatgatgt 52921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 44494228 - 44494331
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  44494228 atgatgttacctatgaattgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagcactaaggggatgttaagaataattattattg 44494327  T
Q  143 agtg 146  Q
    ||||    
T  44494328 agtg 44494331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 11252086 - 11252190
Alignment:
Q  42 tatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctatt-catgagcattaaggggatgttaagaagaattattat 140  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  11252086 tatgatgttacctatgagttgttaaatgtacttgatgagg-ttatgttaagttgtcttctatttcatgagcactaaggggatgttaagaagaattattat 11252184  T
Q  141 tgagtg 146  Q
    ||||||    
T  11252185 tgagtg 11252190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 21967997 - 21968108
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaag--------ttgtcttctattcatgagcattaaggggatgttaagaagaat 134  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||    
T  21967997 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgttaagaagaat 21968096  T
Q  135 tattattgagtg 146  Q
    ||||||||||||    
T  21968097 tattattgagtg 21968108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 21980837 - 21980948
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaag--------ttgtcttctattcatgagcattaaggggatgttaagaagaat 134  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||    
T  21980837 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgttaagaagaat 21980936  T
Q  135 tattattgagtg 146  Q
    ||||||||||||    
T  21980937 tattattgagtg 21980948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 21985820 - 21985931
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaag--------ttgtcttctattcatgagcattaaggggatgttaagaagaat 134  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||    
T  21985820 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgttaagaagaat 21985919  T
Q  135 tattattgagtg 146  Q
    ||||||||||||    
T  21985920 tattattgagtg 21985931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 22009201 - 22009312
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg--------tcttctattcatgagcattaaggggatgttaagaagaat 134  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||        | ||||||||||||||| |||||||||||||||||||||    
T  22009201 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtgttctattcatgagcactaaggggatgttaagaagaat 22009300  T
Q  135 tattattgagtg 146  Q
    ||||||| ||||    
T  22009301 tattattaagtg 22009312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 23825059 - 23824991
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  23825059 cggtgttgtcatgtcatttgcatgagttggtgttgttggttgtaaatgccatattgatgatgatgatgt 23824991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 3697607 - 3697539
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  3697607 cggtgttgtaatgtcatttgcatgagtcggtgttgttggttgtaaatgccatattgatcatgatgatgt 3697539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 22000783 - 22000873
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgt--------taagttgtcttctattcatgagcattaaggggatgtt 125  Q
    ||||||||||||||||||||||||||||||| || |||||||||||        |||||||||||||||||||||||| ||||||||||||    
T  22000783 atgatgttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatgagcactaaggggatgtt 22000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 30767164 - 30767232
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||| |||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  30767164 cggtgttgttatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 30767232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 23653813 - 23653750
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    ||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||    
T  23653813 ggtgttgtcatgtcatttgcatgagtcggtgttgttggttgcatttgccatattgatgatgatg 23653750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 34950160 - 34950057
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    ||||||||||||||||||||||||||||||| || |||  || | |||  || | || | |||||||||| ||| |||||||||||||||||||||||||    
T  34950160 atgatgttacctatgagttgttaaatgtacttgatgagtttttttttattttttttttttttcatgagcactaatgggatgttaagaagaattattattg 34950061  T
Q  143 agtg 146  Q
    ||||    
T  34950060 agtg 34950057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 42561025 - 42561078
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  42561025 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 42561078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 31418910 - 31418975
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||||| || |||||||||  |||||| ||||||||||||||||    
T  31418910 gtgttgtcatgtcatttgcatgagtcggtcttgttggttgtagttgccat-ttgatgatgatgatgt 31418975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8414893 - 8414940
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  8414893 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 8414940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11774458 - 11774411
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  11774458 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 11774411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 21930587 - 21930521
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||| |||||||||| |||| ||||||| || |||||||||| ||||||||||||    
T  21930587 ggtgttgtcatgtcatt-gcatgagtcgttgttgttggttgaaattgccatattgttgatgatgatgt 21930521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22009113 - 22009160
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22009113 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 22009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34950248 - 34950201
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  34950248 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 34950201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44494140 - 44494187
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  44494140 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 44494187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 11774370 - 11774318
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||| ||||||||||||||||||| || ||||||||||||||||||    
T  11774370 atgaggttacccatgagttgttaaatgtacttgatgagggttatgttaagttg 11774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 21282020 - 21281952
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||| ||||||| ||||||||||||   | |||| ||||| |||||||||||||||||||||||    
T  21282020 cggtgttgttatgtcatatgcatgagtcggcactgttggatgtaattgccatattgatgatgatgatgt 21281952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 21328640 - 21328588
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  21328640 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21328588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11252004 - 11252051
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||    
T  11252004 gtgtactcttacgtggtttatgttgatgagtatgacgaggttatgatg 11252051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 21839452 - 21839386
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||| |||||||||| || | ||||||| || |||||||||| ||||||||||||    
T  21839452 ggtgttgtcatgtcatt-gcatgagtcgttggtgttggttgaaattgccatattgttgatgatgatgt 21839386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21980749 - 21980796
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  21980749 gtgtactcttacattgtttatgttgatgagtatgacgaggttatgatg 21980796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21985732 - 21985779
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  21985732 gtgtactcttacattgtttatgttgatgagtatgacgaggttatgatg 21985779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 5240015 - 5239951
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||||||| || ||||||   | |||||| ||||||||||||||||    
T  5240015 cggtgttgtcatgtcatttgcatgagtcggttttgttggtt---actgccat-ttgatgatgatgatgt 5239951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 8414981 - 8415033
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  8414981 atgaggttacctatgagttgttaaatgtacttgattagggttattttaagttg 8415033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 21386233 - 21386181
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  21386233 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 21386181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 23427900 - 23427848
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| |||||||||||||||||||||  | || |||||||||||||||    
T  23427900 atgatgttatctatgagttgttaaatgtacttaatgatggttatgttaagttg 23427848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 23913339 - 23913287
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| |||| |||||||||||||||| || || |||||||||||||||    
T  23913339 atgatgttatctataagttgttaaatgtacttgatgatggttatgttaagttg 23913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 21967917 - 21967956
Alignment:
Q  9 ttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  21967917 ttacattgtttatgttgatgagtatgacgaggttatgatg 21967956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22000700 - 22000747
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| ||||||||||||||||||||||  |||||||||||    
T  22000700 gtgtactcttacattgtttatgttgatgagtatgactaggttatgatg 22000747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 14746689 - 14746755
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| ||| |||||| ||  |||||||||||| ||||||    
T  14746689 gtgttgtcatgtcatttgcatgagtcttagttgttgattgtaattgttatattgatgatggtgatgt 14746755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 23825086 - 23825053
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    ||||||||||||||| ||||||||||||||||||    
T  23825086 cggtgttgtcatgtcgtttgcatgagtcggtgtt 23825053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 25701724 - 25701789
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||| |||||||  |||||||||   ||| |||||||||  |||||||||||||||||||||||    
T  25701724 ggtgttgtaatgtcat--gcatgagtcttagttgttggttgtagttgccatattgatgatgatgatgt 25701789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 31412728 - 31412756
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggt 181  Q
    |||||||||||||||||||||||||||||    
T  31412728 gtgttgtcatgtcatttgcatgagtcggt 31412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 42560886 - 42560938
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||  || |  |||||||||||||||    
T  42560886 atgatgttatctatgagttgttaaatgtacgtgatggtggttatgttaagttg 42560938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 44385838 - 44385886
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaa 91  Q
    ||||||||| ||||||||||||||||||||| || || | |||||||||    
T  44385838 atgatgttatctatgagttgttaaatgtacttgatgatgattatgttaa 44385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 37839201 - 37839299
Alignment:
Q  48 gttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattgagtg 146  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  37839201 gttacctacaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtg 37839299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 42597930 - 42598028
Alignment:
Q  48 gttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattgagtg 146  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  42597930 gttacctaaaagttgttaaatgtacttgatgagggttatgttaagttgtcttctattcatgagcactaaggggatgttaaggagaattattattgagtg 42598028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 13452162 - 13452094
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  13452162 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccatattgatgatgatgatgt 13452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 28384925 - 28384873
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  28384925 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 28384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 37881331 - 37881264
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |||| | ||||||||||| ||||    
T  37881331 cggtgtagtcatgtcatttgcatgagtcggtgttgttggttgtaattgcc-ttttgatgatgatcatgt 37881264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 10977225 - 10977288
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    |||||||||||||||||||||||||||| | || ||||||| || ||| |||||||||||||||    
T  10977225 ggtgttgtcatgtcatttgcatgagtcgttattgttggttggaattgctatattgatgatgatg 10977288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 631752 - 631804
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  631752 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 13813837 - 13813889
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  13813837 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 13818325 - 13818377
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  13818325 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13818377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 22634931 - 22634983
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  22634931 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 22634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 24048389 - 24048441
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  24048389 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 24048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 15533292 - 15533241
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  15533292 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 15533241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28385013 - 28384966
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||    
T  28385013 gtgtactcttacgttgtttatgttgatgagtatgacgatgttatgatg 28384966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37839108 - 37839155
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  37839108 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 37839155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42597837 - 42597884
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  42597837 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 42597884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 49549088 - 49549139
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  49549088 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 49549139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 36037024 - 36036974
Alignment:
Q  45 gatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  36037024 gatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 36036974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 45959915 - 45959981
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| |||||||||  |||||  ||||||||||||||||    
T  45959915 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtagttgccaccttgatgatgatgatgt 45959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 13452189 - 13452156
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    ||||||||||||||||||||||||||||||||||    
T  13452189 cggtgttgtcatgtcatttgcatgagtcggtgtt 13452156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 41404881 - 41404930
Alignment:
Q  169 tgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  41404881 tgcatgagtctttgttgttggttgtaattgccatattgatgatgatgatg 41404930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 46045045 - 46045094
Alignment:
Q  169 tgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  46045045 tgcatgagtctttgttgttggttgtaattgccatattgatgatgatgatg 46045094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 10711899 - 10711847
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  10711899 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10711847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 10925669 - 10925617
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  10925669 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 10925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 12423017 - 12422965
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || ||  ||||||||||||||    
T  12423017 atgatgttatctatgagttgttaaatgtacttgatgatagttatgttaagttg 12422965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 17052450 - 17052502
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || | |||||||||||||    
T  17052450 atgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 17052502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 27532826 - 27532774
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  27532826 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 27532774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 18211677 - 18211626
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || ||||||||| |||||    
T  18211677 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttgagttg 18211626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 30145847 - 30145805
Alignment:
Q  53 ctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||||||||||||||| || || |||||||||||||||    
T  30145847 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 30145805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 54845121 - 54845187
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| |||||||||   | || |||||||||||||||||    
T  54845121 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtagtcgacacattgatgatgatgatgt 54845187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 23996971 - 23997016
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgt 88  Q
    ||||||||| ||||||||||||||||||||| || || ||||||||    
T  23996971 atgatgttatctatgagttgttaaatgtacttgatgatggttatgt 23997016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 15223620 - 15223568
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || | |||||||||||||    
T  15223620 atgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 15223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 20889298 - 20889233
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||  |||||||||   ||| |||||||||  ||||| |||||||||||||||||    
T  20889298 ggtgttgtcatgtcat--gcatgagtcttagttgttggttgtagttgccacattgatgatgatgatgt 20889233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 31664983 - 31664918
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||  |||||||||   ||| |||||||||  ||||| |||||||||||||||||    
T  31664983 ggtgttgtcatgtcat--gcatgagtcttagttgttggttgtagttgccaaattgatgatgatgatgt 31664918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 11394883 - 11394983
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||| | |||||||| |||||||||||||    
T  11394883 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttgacttctattcatgagcactaagagaatgttaaggagaattattattg 11394982  T
Q  143 a 143  Q
    |    
T  11394983 a 11394983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 16185598 - 16185487
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg--------tcttctattcatgagcattaaggggatgttaagaagaat 134  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||||||        ||||||||||||||||| |||||||||||||||||||||    
T  16185598 atgatgttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcatgagcactaaggggatgttaagaagaat 16185499  T
Q  135 tattattgagtg 146  Q
    || |||||||||    
T  16185498 taatattgagtg 16185487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 32771430 - 32771362
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32771430 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaattgccatattgatgatgatgatgt 32771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 4279925 - 4279857
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  4279925 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 4279857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 19616257 - 19616189
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  19616257 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 19616189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 18301425 - 18301357
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagc 111  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||||||||||||||||||    
T  18301425 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttgtcttctattcatgagc 18301357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 15086165 - 15086231
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||| ||||||||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  15086165 gtgtggtcatgtcatttgcatgagtcggtgttgttggttgtgattgccatattgaggatgatgatgt 15086231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 37244549 - 37244616
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||||||| || |||||||||  |||||| ||||||||||||||||    
T  37244549 cggtgttgtcatgtcatttgcatgagtcggtcttgttggttgtagttgccat-ttgatgatgatgatgt 37244616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 3327758 - 3327692
Alignment:
Q  154 tgttgtcatgtcatttgcatgagtcggtgttattggttgtaa-atgccatattgatgatgatgatgt 219  Q
    ||||| ||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  3327758 tgttgccatgtcatttgcatgagtcggtgttgtcggttgtaatttgccatattgatgatgatgatgt 3327692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 18958672 - 18958737
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||| |||||||    
T  18958672 gtgttgtcatgtcatttgcatgagtcggtattgttggttgtaaatgtcat-ttgatgataatgatgt 18958737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 41283719 - 41283667
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  41283719 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 41283667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11394795 - 11394842
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  11394795 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 11394842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41283807 - 41283760
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41283807 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 41283760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 15212983 - 15212930
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    ||||||||| || ||||||||| | |||||||||||||||||||||||||||||    
T  15212983 taagttgtcctcaattcatgagtactaaggggatgttaagaagaattattattg 15212930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 10607325 - 10607377
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  10607325 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10607377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 11660356 - 11660304
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  11660356 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 11660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 13891704 - 13891652
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  13891704 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13891652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 13892087 - 13892035
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  13892087 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 13892035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 20486816 - 20486764
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  20486816 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 26294977 - 26295021
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaa 195  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  26294977 cggtgtagtcatgtcatttgcatgagtcggtgttgttggttgtaa 26295021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 36306251 - 36306319
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||| ||||||| ||||||||||||   | |||| ||||| |||||||||||||||||||||||    
T  36306251 cggtgttgttatgtcatatgcatgagtcggcactgttggatgtaattgccatattgatgatgatgatgt 36306319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 39268318 - 39268370
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  39268318 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 39268370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 14420860 - 14420809
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  14420860 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 14420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 16005077 - 16005026
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  16005077 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 16005026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16185686 - 16185639
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  16185686 gtgtactcttacgttggttatgttgatgagtatgacgaggttatgatg 16185639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 18606411 - 18606360
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  18606411 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 18871370 - 18871319
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  18871370 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 18871319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 146572 - 146522
Alignment:
Q  45 gatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  146572 gatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 146522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 16952481 - 16952543
Alignment:
Q  155 gttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||| ||||||||||||||||||||||| ||||||||||  |||  |||||||||||| ||||    
T  16952481 gttgtcgtgtcatttgcatgagtcggtgttgttggttgtaatcgcc--attgatgatgataatgt 16952543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 7520220 - 7520272
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || | |||||||||||||    
T  7520220 atgatgttatctatgagttgttaaatgtacttgatgatgattatgttaagttg 7520272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 9752512 - 9752564
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| |  || |||||||||||||||    
T  9752512 atgatgttatctatgagttgttaaatgtacttggtgatggttatgttaagttg 9752564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 15213122 - 15213070
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| | ||||||||||||||||||| || || |||||||||||||||    
T  15213122 atgatgttatccatgagttgttaaatgtacttgatgatggttatgttaagttg 15213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 25928376 - 25928428
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| |||||||||||||||||||||  | || |||||||||||||||    
T  25928376 atgatgttatctatgagttgttaaatgtactttatgatggttatgttaagttg 25928428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 32771456 - 32771424
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    |||||||||||||||||||||||||||||||||    
T  32771456 ggtgttgtcatgtcatttgcatgagtcggtgtt 32771424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 10897902 - 10897953
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| |||||||| |||||||||||| || || |||||||||||||||    
T  10897902 tgatgttatctatgagtcgttaaatgtacttgatgatggttatgttaagttg 10897953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 838148 - 838190
Alignment:
Q  53 ctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||||||||||||||| || || |||||||||||||||    
T  838148 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 838190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 1203328 - 1203370
Alignment:
Q  53 ctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||||||||||||||| || || |||||||||||||||    
T  1203328 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 1203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 16109990 - 16110032
Alignment:
Q  53 ctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||||||||||||||| || || |||||||||||||||    
T  16109990 ctatgagttgttaaatgtacttgatgatggttatgttaagttg 16110032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 20019882 - 20019948
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| ||||||||   ||| | |||||||||||||||||    
T  20019882 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtgggtgctacattgatgatgatgatgt 20019948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 46174285 - 46174219
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||| |||||||||||||||    || |||||||||  ||||| |||||||||||||||||    
T  46174285 gtgttgtcatatcatttgcatgagtcataattgttggttgtagttgccacattgatgatgatgatgt 46174219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 16582495 - 16582443
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||||  |||||||||||||||||||| || || ||||||| |||||||    
T  16582495 atgatgttatttatgagttgttaaatgtacttgatgatggttatgataagttg 16582443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 18424309 - 18424257
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||| ||| ||||||||||||||||||||| || || | |||||||||||||    
T  18424309 atgatattatctatgagttgttaaatgtacttgatgatgtttatgttaagttg 18424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 26291231 - 26291183
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaa 91  Q
    ||||||||| |||||||||||||| |||||| || || |||||||||||    
T  26291231 atgatgttatctatgagttgttaagtgtacttgatgatggttatgttaa 26291183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 39721270 - 39721222
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaa 91  Q
    |||||| || ||||||||||||||||||||| || || |||||||||||    
T  39721270 atgatgatatctatgagttgttaaatgtacttgatgatggttatgttaa 39721222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 21133469 - 21133537
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21133469 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgccatattgatgatgatgatgt 21133537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 11466033 - 11465971
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11466033 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgccatattgatgatgatg 11465971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 19649760 - 19649828
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  19649760 cggtgttgacatgtcatttgcatgagtcggtgttgttggttgtaattgccatattgatgatgatgatgt 19649828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 6744539 - 6744607
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  6744539 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 6744607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 27367802 - 27367866
Alignment:
Q  155 gttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  27367802 gttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgatgatgatgatgt 27367866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 43693363 - 43693295
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||| |||||||||||    
T  43693363 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttttagttgccatattgacgatgatgatgt 43693295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 28971521 - 28971578
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgat 208  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||    
T  28971521 cggtgttgtcatgtcattcacatgagtcggtgttgttggttgtaattgccatattgat 28971578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 37379110 - 37379058
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  37379110 atgaggttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 37379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 21074512 - 21074564
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  21074512 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 21074564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 6481857 - 6481806
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  6481857 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6481806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 6485324 - 6485273
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  6485324 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 6485273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 9240747 - 9240696
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  9240747 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 9240696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 19663563 - 19663614
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  19663563 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 19663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 20260330 - 20260279
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  20260330 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 20260279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 32911647 - 32911711
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||| ||||||||||  |||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  32911647 ggtgtcgtcatgtcat--gcatgagtctttgttgttggttgtaattgccatattgatgatgatgatg 32911711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37379198 - 37379151
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  37379198 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 37379151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 28292680 - 28292614
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| |||||||||  |||||  ||||||||||||||||    
T  28292680 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtagttgccaccttgatgatgatgatgt 28292614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 200596 - 200535
Alignment:
Q  158 gtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||| | ||||||||||| |||||| |||||||||  ||||||||||| |||||||||||    
T  200596 gtcatgacctttgcatgagttggtgttgttggttgtagttgccatattgacgatgatgatgt 200535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 9784068 - 9784016
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| |||||||||||| |||||||| || || |||||||||||||||    
T  9784068 atgatgttatctatgagttgtttaatgtacttgatgatggttatgttaagttg 9784016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 184
Target Start/End: Original strand, 28971496 - 28971527
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    ||||||||||||||||||||||||||||||||    
T  28971496 gtgttgtcatgtcatttgcatgagtcggtgtt 28971527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 281 - 213
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  281 cggtgttgacatgtcatttgcatgagtcggtgttgttggttgtaattgccatattgatgatgatgatgt 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 84 - 1
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgtta 126  Q
    |||| ||||||| |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  84 atgaggttacctttgagttgttaaatgtacttgatgagggttatgttaagctgtcttctattcatgagcactaaggagatgtta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 172 - 125
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  172 gtgtactcttactttgtttatgttgatgagtatgacgaggttatgatg 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 1656 - 1722
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  1656 gtgttgtcatgtcatttgcatgagtcggtgttgttggttgtaaatgtcatattgataatgatgatgt 1722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 38363 - 38295
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  38363 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 38295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 30360 - 30428
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  30360 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 30428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 35761 - 35829
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  35761 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 35829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 173229 - 173324
Alignment:
Q  42 tatgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattatt 141  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||||||         || ||||||||| ||||||||||||||||||||||||||||    
T  173229 tatgatgttacctattagttgttaaatgtacttgatgagggttatgttaa---------tactcatgagcactaaggggatgttaagaagaattattatt 173319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 173142 - 173189
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  173142 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 173189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 174776 - 174844
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  174776 cggtgttgtcatgtcatttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 174844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 1e-21; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 163708 - 163768
Alignment:
Q  86 tgttaagttgtcttctattcatgagcattaaggggatgttaagaagaattattattgagtg 146  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  163708 tgttaagttgtcttctattcatgagtactaaggggatgttaagaagaattattattgagtg 163768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 175528 - 175481
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  175528 gtgtactcttacattgtttatgttgatgagtatgacgaggttatgatg 175481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 512733 - 512799
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||||||||||||||   ||| ||||||||   ||| | |||||||||||||||||    
T  512733 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtgggtgctacattgatgatgatgatgt 512799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 163588 - 163624
Alignment:
Q  59 gttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||||||||| || ||||||||||||||||||    
T  163588 gttgttaaatgtacttgatgagggttatgttaagttg 163624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 52; Significance: 6e-21; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 25999 - 25932
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    |||||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  25999 cggtgttgtcatgcaatttgcatgagtcggtgttgttggttgtaattgccatattgatgatgatgatg 25932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 26026 - 25993
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    ||||||||||||||||||||||||||||||||||    
T  26026 cggtgttgtcatgtcatttgcatgagtcggtgtt 25993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 27408 - 27375
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    ||||||||||||||||||||||||||||||||||    
T  27408 cggtgttgtcatgtcatttgcatgagtcggtgtt 27375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 26052 - 26020
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    |||||||||||||||||||||||||||||||||    
T  26052 ggtgttgtcatgtcatttgcatgagtcggtgtt 26020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 27434 - 27402
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgtt 184  Q
    |||||||||||||||||||||||||||||||||    
T  27434 ggtgttgtcatgtcatttgcatgagtcggtgtt 27402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 10322 - 10390
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||||||  |||||||||||||||    
T  10322 cggtgttgtcatgtcatttgcatgagtctgtgttgttggttgtaattgccatgatgatgatgatgatgt 10390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 17618 - 17682
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||| ||||||  |||||||||||    
T  17618 cggtgttgttatgtcatttgcatgagtctgtgttgttggttgtaattgccatgatgatgatgatg 17682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 52599 - 52667
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  52599 cggtgttgtcatgtcctttgcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 52667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 47194 - 47261
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    ||||||||||||||| || ||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  47194 cggtgttgtcatgtcctt-gcatgagtcggtgttgttggttgtagttgccatattgacgatgatgatgt 47261  T

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Target: scaffold0120 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 5346 - 5409
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    |||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  5346 ggtgttgttatgtcatttgcatgagtcggtgttgttggatgtaattgccatattgatgatgatg 5409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 609 - 674
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  609 gtgttgtcatgtcagttgcatgagtcggtgttgttggttgtaattgccat-ttgatgatgatgatgt 674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 21344 - 21410
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttgtcttctattcatga 109  Q
    ||||||||| ||||||||||||||||||||| || || ||||||||||||||||||| |||||||||    
T  21344 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttgtcttttattcatga 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 4056 - 4003
Alignment:
Q  89 taagttgtcttctattcatgagcattaaggggatgttaagaagaattattattg 142  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  4056 taagttgtcttctattcatgagtactaaggggatgttaagaagaattattattg 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 4195 - 4143
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  4195 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 4275 - 4236
Alignment:
Q  9 ttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  4275 ttacgttgtttatgttgatgattatgatgatgttatgatg 4236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 2881 - 2813
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattgg-ttgtaaatgccatattgatgatgatgatg 218  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||  ||||||||    
T  2881 cggtgttgtcatgtcatttgcatgagtcggtgttgttggattgtaattgccatattgatattgatgatg 2813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 31791 - 31856
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||| ||||||    
T  31791 gtgttgtcatgtcagttgcatgagtcggtgttgttggttgtaattgccat-ttgatgatggtgatgt 31856  T

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Target: scaffold0420 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 9964 - 9900
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    ||||||||| ||||||| ||||||||||||| || |||| ||||| |||||||||||||||||||    
T  9964 cggtgttgttatgtcatatgcatgagtcggtattgttggatgtaattgccatattgatgatgatg 9900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3182 - 3229
Alignment:
Q  1 gtgtacttttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  3182 gtgtactcttacgttgtttatgttgatgagtatgacgaggttatgatg 3229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 3270 - 3315
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgt 88  Q
    |||| |||||||||||||||||||||||||| || |||||||||||    
T  3270 atgaggttacctatgagttgttaaatgtacttgatgagggttatgt 3315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1726 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1726
Description:

Target: scaffold1726; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 159 - 92
Alignment:
Q  151 cggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||| |||||||| |||||||||||| ||| || ||| |||||| ||||||||||||||||    
T  159 cggtgttgtcatttcatttgcttgagtcggtgttgttgattataattgccat-ttgatgatgatgatgt 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 6965 - 7017
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  6965 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 25572 - 25624
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  25572 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 25624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 37207 - 37259
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  37207 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 37259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 74336 - 74388
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  74336 atgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 74388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 273 - 222
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  273 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 5315 - 5264
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  5315 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 10827 - 10878
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  10827 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 10878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 109674 - 109623
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  109674 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 143935 - 143871
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatg 218  Q
    ||||| ||||||||||  |||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  143935 ggtgtcgtcatgtcat--gcatgagtctttgttgttggttgtaattgccatattgatgatgatgatg 143871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 224148 - 224199
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  224148 tgatgttatctatgagttgttaaatgtacttgatgatggttatgttaagttg 224199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 4048 - 3996
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  4048 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 3996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 23942 - 23994
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  23942 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 23994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 28546 - 28494
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || ||  ||||||||||||||    
T  28546 atgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 28494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 34011 - 33959
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||||||||||||||||||||| || ||  ||||||||||||||    
T  34011 atgatgttatctatgagttgttaaatgtacttgatgatcgttatgttaagttg 33959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 62844 - 62896
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||||    
T  62844 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagttg 62896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 4329 - 4391
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    ||||||||||||||||| |||||||||| |||| ||||||| |  | |||||||||||||||||    
T  4329 ggtgttgtcatgtcatt-gcatgagtcgttgttgttggttgcattttccatattgatgatgatg 4391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 18896 - 18845
Alignment:
Q  44 tgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    |||||||| |||| |||||||||||||||| || || |||||||||||||||    
T  18896 tgatgttatctataagttgttaaatgtacttgatgatggttatgttaagttg 18845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 5898 - 5836
Alignment:
Q  152 ggtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatg 215  Q
    ||||||||||||||||| ||||||||||  ||| ||||||| || |||||||||| ||||||||    
T  5898 ggtgttgtcatgtcatt-gcatgagtcgtcgttgttggttgaaattgccatattgttgatgatg 5836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 208696 - 208657
Alignment:
Q  9 ttacgttgtttatgttgatgagtatgatgaggttatgatg 48  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  208696 ttacattgtttatgttgatgagtatgacgaggttatgatg 208657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 5921 - 5987
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatgatgatgt 219  Q
    |||||||||||||||||||||||||||  ||| ||| |||||| ||  |  ||||||||||||||||    
T  5921 gtgttgtcatgtcatttgcatgagtcgtagttgttgattgtaattgttactttgatgatgatgatgt 5987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 37202 - 37252
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagt 93  Q
    ||||||||| ||| ||||||||||||||||| || || |||||||||||||    
T  37202 atgatgttatctaggagttgttaaatgtacttgatgatggttatgttaagt 37252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 1218 - 1278
Alignment:
Q  153 gtgttgtcatgtcatttgcatgagtcggtgttattggttgtaaatgccatattgatgatga 213  Q
    ||||||||||||||||||||||||||   ||| |||||||||  ||| | |||||||||||    
T  1218 gtgttgtcatgtcatttgcatgagtcttagttgttggttgtagttgctacattgatgatga 1278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 8744 - 8796
Alignment:
Q  43 atgatgttacctatgagttgttaaatgtactcgaggagggttatgttaagttg 95  Q
    ||||||||| ||| ||||||||||||||||  || || |||||||||||||||    
T  8744 atgatgttatctacgagttgttaaatgtacatgatgatggttatgttaagttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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