View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18448_high_1 (Length: 1315)

Name: NF18448_high_1
Description: NF18448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18448_high_1
NF18448_high_1
[»] chr2 (30 HSPs)
chr2 (11-624)||(12268283-12268889)
chr2 (811-1296)||(12267791-12268276)
chr2 (167-280)||(12270163-12270276)
chr2 (752-817)||(1777462-1777527)
chr2 (752-819)||(25979252-25979319)
chr2 (752-808)||(2412429-2412485)
chr2 (752-808)||(23861754-23861810)
chr2 (752-808)||(25977872-25977928)
chr2 (756-810)||(23863055-23863109)
chr2 (752-807)||(36837779-36837834)
chr2 (752-808)||(11087051-11087107)
chr2 (752-808)||(19604920-19604976)
chr2 (752-808)||(30843646-30843702)
chr2 (752-818)||(8809588-8809655)
chr2 (764-807)||(24754171-24754214)
chr2 (755-812)||(1137979-1138036)
chr2 (752-808)||(20245306-20245363)
chr2 (755-820)||(24358890-24358955)
chr2 (752-808)||(1778791-1778847)
chr2 (760-808)||(25282409-25282457)
chr2 (752-808)||(25283273-25283329)
chr2 (762-808)||(3924877-3924923)
chr2 (752-810)||(21573936-21573994)
chr2 (752-818)||(38980195-38980261)
chr2 (755-808)||(4794132-4794185)
chr2 (752-809)||(8810704-8810761)
chr2 (755-808)||(18113091-18113144)
chr2 (778-811)||(29182410-29182443)
chr2 (755-808)||(33575754-33575807)
chr2 (752-817)||(37271732-37271797)
[»] chr3 (40 HSPs)
chr3 (752-820)||(52401007-52401075)
chr3 (752-808)||(4705683-4705739)
chr3 (752-808)||(20489359-20489415)
chr3 (752-808)||(45267307-45267363)
chr3 (752-808)||(48035733-48035789)
chr3 (752-808)||(52403125-52403181)
chr3 (752-811)||(20488365-20488424)
chr3 (755-808)||(20585648-20585701)
chr3 (752-808)||(39820605-39820661)
chr3 (752-808)||(45268571-45268627)
chr3 (752-808)||(53121304-53121360)
chr3 (759-808)||(42446528-42446577)
chr3 (756-808)||(46026078-46026130)
chr3 (752-808)||(48033060-48033116)
chr3 (752-808)||(52708618-52708674)
chr3 (757-808)||(38505585-38505636)
chr3 (756-818)||(9855170-9855232)
chr3 (756-814)||(40477379-40477437)
chr3 (752-805)||(977847-977900)
chr3 (759-808)||(40476223-40476272)
chr3 (752-808)||(3416497-3416553)
chr3 (752-808)||(42447788-42447844)
chr3 (752-808)||(46104345-46104401)
chr3 (752-808)||(47433810-47433866)
chr3 (756-808)||(54437472-54437524)
chr3 (752-807)||(22508738-22508793)
chr3 (764-807)||(42444040-42444083)
chr3 (752-814)||(39819308-39819370)
chr3 (756-818)||(41780813-41780875)
chr3 (752-808)||(976782-976838)
chr3 (752-808)||(32635596-32635652)
chr3 (752-808)||(32637189-32637245)
chr3 (752-808)||(43641145-43641201)
chr3 (752-808)||(46027418-46027474)
chr3 (757-817)||(51004135-51004195)
chr3 (755-807)||(52707539-52707591)
chr3 (754-800)||(20644575-20644621)
chr3 (755-813)||(43441548-43441606)
chr3 (772-817)||(3417813-3417858)
chr3 (755-800)||(8555193-8555238)
[»] chr7 (38 HSPs)
chr7 (752-819)||(41693636-41693703)
chr7 (752-808)||(35212070-35212126)
chr7 (752-814)||(24195603-24195665)
chr7 (752-808)||(17066427-17066483)
chr7 (752-808)||(41694956-41695012)
chr7 (752-814)||(42254954-42255016)
chr7 (752-808)||(13418952-13419008)
chr7 (752-808)||(31848145-31848201)
chr7 (752-807)||(12385708-12385763)
chr7 (752-807)||(38742184-38742239)
chr7 (758-808)||(31489942-31489992)
chr7 (756-808)||(5611512-5611564)
chr7 (752-820)||(28462629-28462697)
chr7 (756-808)||(31853550-31853602)
chr7 (752-808)||(32197910-32197966)
chr7 (760-808)||(39619800-39619848)
chr7 (752-807)||(11217072-11217127)
chr7 (752-807)||(32544775-32544830)
chr7 (757-808)||(36748200-36748250)
chr7 (760-807)||(43066004-43066051)
chr7 (756-818)||(36749252-36749314)
chr7 (755-808)||(32196686-32196739)
chr7 (752-805)||(39618661-39618713)
chr7 (757-813)||(554242-554298)
chr7 (752-808)||(12933421-12933477)
chr7 (752-808)||(24197104-24197160)
chr7 (752-808)||(25046241-25046297)
chr7 (752-808)||(40576768-40576824)
chr7 (752-796)||(42255903-42255947)
chr7 (752-804)||(43869913-43869965)
chr7 (752-807)||(5610159-5610214)
chr7 (755-818)||(25988694-25988757)
chr7 (778-813)||(28263039-28263074)
chr7 (755-814)||(44568635-44568694)
chr7 (778-828)||(8555767-8555817)
chr7 (755-816)||(1614849-1614910)
chr7 (756-821)||(11766906-11766971)
chr7 (752-805)||(25037755-25037808)
[»] chr1 (45 HSPs)
chr1 (752-808)||(46075051-46075107)
chr1 (756-808)||(24609921-24609973)
chr1 (752-813)||(9774889-9774950)
chr1 (752-816)||(11710547-11710611)
chr1 (752-808)||(27262910-27262966)
chr1 (752-808)||(27264217-27264273)
chr1 (752-808)||(39163025-39163081)
chr1 (752-814)||(47038862-47038924)
chr1 (755-808)||(48588965-48589018)
chr1 (755-808)||(48594052-48594105)
chr1 (755-808)||(48598663-48598716)
chr1 (752-808)||(23469970-23470026)
chr1 (752-808)||(24611118-24611174)
chr1 (752-808)||(35721103-35721159)
chr1 (752-808)||(37395635-37395691)
chr1 (752-808)||(50164405-50164461)
chr1 (752-807)||(9774040-9774095)
chr1 (752-815)||(20723689-20723752)
chr1 (752-808)||(11711255-11711310)
chr1 (752-808)||(13074575-13074631)
chr1 (752-808)||(20722474-20722530)
chr1 (752-808)||(24427370-24427426)
chr1 (752-808)||(26863862-26863918)
chr1 (752-808)||(46073887-46073943)
chr1 (762-808)||(2604138-2604184)
chr1 (752-805)||(17976766-17976819)
chr1 (752-805)||(17977560-17977613)
chr1 (752-805)||(27816721-27816774)
chr1 (778-818)||(25658269-25658309)
chr1 (752-808)||(34934748-34934804)
chr1 (752-808)||(35722286-35722342)
chr1 (752-808)||(35911889-35911945)
chr1 (752-808)||(37396841-37396897)
chr1 (755-818)||(33000614-33000677)
chr1 (752-819)||(45290448-45290515)
chr1 (761-808)||(45979506-45979553)
chr1 (755-810)||(51240119-51240174)
chr1 (755-813)||(10631473-10631531)
chr1 (755-805)||(28198435-28198485)
chr1 (762-808)||(48856214-48856260)
chr1 (755-800)||(12360673-12360718)
chr1 (778-815)||(17130051-17130088)
chr1 (755-808)||(24507481-24507534)
chr1 (752-805)||(27815446-27815499)
chr1 (752-808)||(39162825-39162882)
[»] chr6 (24 HSPs)
chr6 (755-813)||(17516159-17516217)
chr6 (752-808)||(17517310-17517366)
chr6 (752-808)||(34998142-34998198)
chr6 (755-808)||(29291361-29291414)
chr6 (755-807)||(1171655-1171707)
chr6 (752-808)||(18810534-18810590)
chr6 (752-808)||(21165248-21165304)
chr6 (752-807)||(3279500-3279555)
chr6 (755-808)||(1974156-1974209)
chr6 (752-813)||(16995448-16995509)
chr6 (752-813)||(25440674-25440735)
chr6 (752-808)||(20393269-20393325)
chr6 (763-815)||(20895953-20896005)
chr6 (752-808)||(20897498-20897554)
chr6 (752-808)||(21953208-21953264)
chr6 (759-819)||(30253547-30253607)
chr6 (752-808)||(34995116-34995172)
chr6 (752-808)||(1972402-1972458)
chr6 (756-808)||(3276369-3276421)
chr6 (755-811)||(13617528-13617584)
chr6 (756-807)||(20391217-20391268)
chr6 (755-808)||(17000281-17000334)
chr6 (778-819)||(19320758-19320799)
chr6 (755-808)||(31198617-31198670)
[»] chr5 (23 HSPs)
chr5 (752-814)||(3936574-3936636)
chr5 (752-811)||(3205103-3205162)
chr5 (752-813)||(27571130-27571191)
chr5 (752-808)||(4565395-4565451)
chr5 (752-808)||(6894011-6894067)
chr5 (756-811)||(15604063-15604117)
chr5 (751-808)||(14809165-14809222)
chr5 (752-808)||(3954054-3954110)
chr5 (752-808)||(31540498-31540554)
chr5 (752-808)||(31541623-31541679)
chr5 (757-808)||(15599767-15599818)
chr5 (756-813)||(34911833-34911890)
chr5 (752-808)||(3938061-3938117)
chr5 (760-808)||(27097314-27097362)
chr5 (757-808)||(27570058-27570109)
chr5 (755-813)||(6912802-6912860)
chr5 (770-808)||(25252643-25252681)
chr5 (752-818)||(25254132-25254198)
chr5 (770-808)||(25316428-25316466)
chr5 (752-818)||(25317922-25317988)
chr5 (755-817)||(40764725-40764787)
chr5 (755-820)||(19565457-19565522)
chr5 (759-808)||(34910595-34910643)
[»] chr8 (37 HSPs)
chr8 (752-813)||(22534723-22534784)
chr8 (752-819)||(10718449-10718516)
chr8 (755-811)||(3483632-3483688)
chr8 (752-808)||(10717123-10717179)
chr8 (756-808)||(14197827-14197879)
chr8 (360-440)||(17032022-17032100)
chr8 (360-440)||(17562458-17562536)
chr8 (756-808)||(28997998-28998050)
chr8 (752-813)||(36588219-36588280)
chr8 (752-808)||(28996836-28996892)
chr8 (753-808)||(45517962-45518017)
chr8 (755-808)||(1420446-1420499)
chr8 (752-813)||(22533314-22533375)
chr8 (755-808)||(39440426-39440479)
chr8 (752-808)||(4182624-4182680)
chr8 (752-808)||(22270945-22271001)
chr8 (752-808)||(22272271-22272327)
chr8 (752-808)||(39439926-39439982)
chr8 (755-818)||(10872907-10872970)
chr8 (755-808)||(3680746-3680799)
chr8 (369-422)||(17030575-17030627)
chr8 (369-422)||(17561011-17561063)
chr8 (752-813)||(45516394-45516455)
chr8 (752-808)||(3031544-3031600)
chr8 (752-808)||(4183980-4184036)
chr8 (756-820)||(27117922-27117986)
chr8 (752-808)||(30124224-30124280)
chr8 (752-808)||(38456731-38456787)
chr8 (752-808)||(38658483-38658539)
chr8 (755-814)||(20984142-20984201)
chr8 (760-807)||(41357375-41357422)
chr8 (756-810)||(38455447-38455501)
chr8 (752-805)||(1376940-1376993)
chr8 (752-805)||(1385556-1385609)
chr8 (755-808)||(4473989-4474042)
chr8 (755-820)||(28346384-28346449)
chr8 (752-813)||(36589388-36589449)
[»] chr4 (38 HSPs)
chr4 (752-808)||(33137229-33137285)
chr4 (752-808)||(3879088-3879144)
chr4 (752-808)||(22204057-22204113)
chr4 (752-808)||(42359347-42359403)
chr4 (752-808)||(54121701-54121757)
chr4 (756-808)||(3880501-3880553)
chr4 (752-816)||(29060883-29060947)
chr4 (756-808)||(32699319-32699371)
chr4 (756-808)||(33134893-33134945)
chr4 (752-808)||(45618287-45618343)
chr4 (752-807)||(17371846-17371901)
chr4 (755-817)||(34659699-34659761)
chr4 (759-812)||(41935078-41935131)
chr4 (752-813)||(55542580-55542641)
chr4 (752-808)||(19674416-19674472)
chr4 (760-808)||(38166497-38166545)
chr4 (752-820)||(42358022-42358090)
chr4 (752-808)||(45619732-45619788)
chr4 (752-791)||(40198593-40198632)
chr4 (752-814)||(16573374-16573436)
chr4 (758-808)||(41933820-41933870)
chr4 (771-808)||(5259171-5259208)
chr4 (755-808)||(19675624-19675677)
chr4 (759-811)||(16916066-16916118)
chr4 (755-818)||(26412182-26412245)
chr4 (754-808)||(4211563-4211617)
chr4 (755-808)||(12152438-12152491)
chr4 (755-808)||(14487804-14487857)
chr4 (755-816)||(14791751-14791812)
chr4 (752-813)||(17281568-17281629)
chr4 (752-813)||(17370070-17370131)
chr4 (755-808)||(23245540-23245593)
chr4 (755-808)||(26412529-26412582)
chr4 (755-816)||(30046737-30046798)
chr4 (755-816)||(30061078-30061139)
chr4 (763-808)||(32698001-32698046)
chr4 (755-816)||(43231334-43231395)
chr4 (755-808)||(46292394-46292447)
[»] scaffold0002 (4 HSPs)
scaffold0002 (752-805)||(344942-344995)
scaffold0002 (756-808)||(374337-374389)
scaffold0002 (756-808)||(345902-345954)
scaffold0002 (763-808)||(376381-376426)
[»] scaffold0562 (1 HSPs)
scaffold0562 (752-808)||(9924-9980)
[»] scaffold0517 (2 HSPs)
scaffold0517 (752-808)||(11523-11579)
scaffold0517 (752-808)||(10317-10373)
[»] scaffold0230 (1 HSPs)
scaffold0230 (752-808)||(432-488)
[»] scaffold0106 (2 HSPs)
scaffold0106 (752-808)||(30908-30964)
scaffold0106 (752-808)||(29731-29787)
[»] scaffold0001 (2 HSPs)
scaffold0001 (752-808)||(120986-121042)
scaffold0001 (752-808)||(119595-119651)
[»] scaffold0095 (1 HSPs)
scaffold0095 (755-808)||(42759-42812)
[»] scaffold0516 (1 HSPs)
scaffold0516 (756-808)||(1140-1192)
[»] scaffold0009 (1 HSPs)
scaffold0009 (752-808)||(202581-202637)
[»] scaffold0765 (1 HSPs)
scaffold0765 (756-807)||(1863-1914)
[»] scaffold0176 (1 HSPs)
scaffold0176 (778-820)||(21686-21728)
[»] scaffold0005 (1 HSPs)
scaffold0005 (755-816)||(47919-47980)


Alignment Details
Target: chr2 (Bit Score: 492; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 11 - 624
Target Start/End: Complemental strand, 12268889 - 12268283
Alignment:
Q  11 acatcatcacaacgcattgttttacttgactaactaccataactcttctagctatttatcttttctgaatctggactaaaattctccagtttgtgatgtt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268889 acatcatcacaacgcattgttttacttgactaactaccataactcttctagctatttatcttttctgaatctggactaaaattctccagtttgtgatgtt 12268790  T
Q  111 ttagattttgcagatgactcacccaaaaagatatttgcattagacctttatttttt-atagcaaacgattctataaaataatttataatttattagtaat 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12268789 ttagattttgcagatgactcacccaaaaagatatttgcattagacctttatttttttatagcaaacgattctataaaataatttataatttattagtaat 12268690  T
Q  210 aaatgaaaatattgatatggggggatgggtagccactactgcatttgtgacttttagtaacactcactcactcaccttgtaacatttgttaaattgttac 309  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268689 aaatgaaaatattgatatggg--------tagccactactgcatttgtgacttttagtaacactcactcactcaccttgtaacatttgttaaattgttac 12268598  T
Q  310 tgctatggtgattttgtaacatttccaaaatgtgtttcatactttgtaagttgtaacaatctttttgttattagtgctttataattttccttttaaatta 409  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268597 tgatatggtgattttgtaacatttccaaaatgtgtttcatactttgtacgttgtaacaatctttttgttattagtgctttataattttccttttaaatta 12268498  T
Q  410 catttcaattttctaactctttaaatttctctcacttccaccttcttctcctcactcaattgtgatcgaaacccagaagcaaaaatggagtgctgttgat 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| || ||    
T  12268497 catttcaattttctaactctttaaatttctctcacttccaccttcttcttctcactcgattgtgatcgaaccccagaagcaaaaatggagtgctattaat 12268398  T
Q  510 tttgagctcgattgttataannnnnnnaaaaagaagatttttatagtgcatcatctttttgctataatttgtttatcaaagaaattttnnnnnnncttaa 609  Q
    ||||||||||||||||||||       ||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||||       |||||    
T  12268397 tttgagctcgattgttataatttttttaaaaagaaattttttatagtgtgtcatctttttgctataatttgtttatcaaagaaattttaaaaaaacttaa 12268298  T
Q  610 atgaaaaattggttt 624  Q
    |||||||||||||||    
T  12268297 atgaaaaattggttt 12268283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 811 - 1296
Target Start/End: Complemental strand, 12268276 - 12267791
Alignment:
Q  811 tttattttaaaatgtcatcgtaagtgtggtattctcatcttgaatgtatcaatatcattaaacaaaacttggaatgaggtttacactaggtgccccatgt 910  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268276 tttattttaaaatgtcattgtaagtgtggtattctcatcttgaatgtatcaatatcattaaacaaaacttggaatgaggtttacactaggtgccccatgt 12268177  T
Q  911 ttgtgcttagtcaaaacatcaaatccttgaaagtcaaacataaggattggaataagaatgtgttcggggacattaacatcaatttccaagtaactaaatc 1010  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  12268176 ttgtgcttagtcaaaacatcaaatccttgaaagtcaaacataaggattggaataagaatgtgttcggggacattaacatcaatttccaagtaactgaata 12268077  T
Q  1011 taaccttcatcaaattcagagtcaaactaatgatagtgtctacaacaataatcttcttgttgaagagaaagttgtggatagaatcaaatccaaattgaca 1110  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268076 caaccttcatcaaattcagagtcaaactaatgatagtgtctacaacaataatcttcttgttgaagagaaagttgtggatagaatcaaatccaaattgaca 12267977  T
Q  1111 actttgaaggcctctttaatttctatagtgggaagggttcaagttattagattttaattcatagcatgagtatctatagctttgtcatttattcattgtg 1210  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  12267976 actttgaaggcatctttaatttctatagtgggaagggttcaagttattagattttaattcatagtatgagtatctatagctttgtcatttattcattgcg 12267877  T
Q  1211 tgatctgatggcattgaactggaaggaggaacaaatgatttccaaacattcttagccctaggctgcttattcaatggaggattttg 1296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12267876 tgatctgatggcattgaactggaaggaggaacaaatgatttccaaacattcttagccctaggctgcttatacaatggaggattttg 12267791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 12270276 - 12270163
Alignment:
Q  167 atagcaaacgattctataaaataatttataatttattagtaataaatgaaaatattgatatggggggatgggtagccactactgcatttgtgacttttag 266  Q
    ||||| ||||||||| |||| ||||||||||||||||   |||||||||||||||| |||||||| ||| ||||||||||||| ||||| |||||||| |    
T  12270276 atagccaacgattctttaaagtaatttataatttattgcaaataaatgaaaatatttatatggggtgattggtagccactactacatttatgactttttg 12270177  T
Q  267 taacactcactcac 280  Q
    ||||||| ||||||    
T  12270176 taacacttactcac 12270163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 752 - 817
Target Start/End: Complemental strand, 1777527 - 1777462
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 817  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  1777527 taccagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagcctttattt 1777462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 752 - 819
Target Start/End: Original strand, 25979252 - 25979319
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 819  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  25979252 taccagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagccttaatttta 25979319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 2412429 - 2412485
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  2412429 taccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 2412485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 23861810 - 23861754
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  23861810 taccagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttag 23861754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 25977928 - 25977872
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  25977928 taccagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttag 25977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 756 - 810
Target Start/End: Original strand, 23863055 - 23863109
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 810  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  23863055 agggatcaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 23863109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 752 - 807
Target Start/End: Original strand, 36837779 - 36837834
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||||||||||||||||||||||||| |||||||||| || |||||| ||||||||    
T  36837779 taccagggaccaaaacccaaactcgctatatttgcagagaccaaaaatatatttta 36837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 11087107 - 11087051
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| ||||||||| |||||||||| |||||||||||||| |||| ||||||||||    
T  11087107 taccaaggaccaaaagccaaactcgctatatttgcagggattaaaatcatattttag 11087051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 19604920 - 19604976
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||   ||||||||| |||||| ||||||||||||||||    
T  19604920 taccagggaccaaaacccaaatgagccatatttacagggaccaaaaacatattttag 19604976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 30843702 - 30843646
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||  |||||||||| ||| |||| ||||||||||    
T  30843702 taccagggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttag 30843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 752 - 818
Target Start/End: Complemental strand, 8809655 - 8809588
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgc-agggatcaaaaacatattttagtctttatttt 818  Q
    ||||||||||||||||||||| |||  |||||||| ||||| |||||||||||||||| |||| ||||    
T  8809655 taccagggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttagcctttttttt 8809588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 764 - 807
Target Start/End: Original strand, 24754171 - 24754214
Alignment:
Q  764 aaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  24754171 aaacccaaattcgccatatttgcagggaccaaaaacatatttta 24754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 755 - 812
Target Start/End: Complemental strand, 1138036 - 1137979
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctt 812  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||||||    
T  1138036 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagtctt 1137979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 20245306 - 20245363
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaa-catattttag 808  Q
    |||||||||| |||||||||| |||| ||||||||||| |||||||| ||||||||||    
T  20245306 taccagggactaaaacccaaattcgctatatttgcaggaatcaaaaaccatattttag 20245363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 755 - 820
Target Start/End: Original strand, 24358890 - 24358955
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| ||| |||||||    
T  24358890 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttagccttcattttaa 24358955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 1778791 - 1778847
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| ||||||||||||||| |||| ||||||||||| | ||||| ||||||||||    
T  1778791 taccaaggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttag 1778847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 760 - 808
Target Start/End: Complemental strand, 25282457 - 25282409
Alignment:
Q  760 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||| |||||||| ||||||| |||||| ||||||||||||||||    
T  25282457 accaaaactcaaactcgacatatttacagggaccaaaaacatattttag 25282409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 25283273 - 25283329
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||| |||||| |||| |||| |||||||||| || ||||||||||||||||    
T  25283273 taccagggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttag 25283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 762 - 808
Target Start/End: Original strand, 3924877 - 3924923
Alignment:
Q  762 caaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| |||||||||||||||||||| ||| ||||| ||||||||||    
T  3924877 caaaatccaaactcgccatatttgcaaggagcaaaagcatattttag 3924923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 752 - 810
Target Start/End: Complemental strand, 21573994 - 21573936
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 810  Q
    ||||| |||||||||  |||||| | |||||||||||||| ||||| ||||||||||||    
T  21573994 taccaaggaccaaaaatcaaacttgtcatatttgcagggaccaaaagcatattttagtc 21573936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 752 - 818
Target Start/End: Original strand, 38980195 - 38980261
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    |||||||||| |||||| ||||  | ||||||||||||||  |||| |||||||||| |||||||||    
T  38980195 taccagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctttatttt 38980261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 4794185 - 4794132
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  4794185 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttag 4794132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 809
Target Start/End: Original strand, 8810704 - 8810761
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagt 809  Q
    |||||||||  |||| ||||| |||| |||||||||| || |||||||||||||||||    
T  8810704 taccagggattaaaatccaaattcgctatatttgcagagaccaaaaacatattttagt 8810761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 18113144 - 18113091
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||| | |||||||||||||| ||||| ||||||||||    
T  18113144 cagggactaaaaccaaaactaggcatatttgcagggaccaaaaccatattttag 18113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 29182410 - 29182443
Alignment:
Q  778 catatttgcagggatcaaaaacatattttagtct 811  Q
    |||||||||||||||||||| |||||||||||||    
T  29182410 catatttgcagggatcaaaatcatattttagtct 29182443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 33575807 - 33575754
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  33575807 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttag 33575754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 817
Target Start/End: Complemental strand, 37271797 - 37271732
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 817  Q
    |||||||||| |||||| ||||  | ||||||||||||||  |||| |||||||||| ||||||||    
T  37271797 taccagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctttattt 37271732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 4e-23; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 752 - 820
Target Start/End: Complemental strand, 52401075 - 52401007
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  52401075 taccagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagccttaattttaa 52401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 4705739 - 4705683
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  4705739 taccagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttag 4705683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 20489359 - 20489415
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  20489359 taccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 20489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 45267363 - 45267307
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  45267363 taccagggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttag 45267307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 48035733 - 48035789
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  48035733 taccagggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttag 48035789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 52403125 - 52403181
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  52403125 taccagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 52403181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 752 - 811
Target Start/End: Complemental strand, 20488424 - 20488365
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 811  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  20488424 taccagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttagtct 20488365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 20585648 - 20585701
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  20585648 cagggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttag 20585701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 39820605 - 39820661
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  39820605 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttag 39820661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 45268571 - 45268627
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  45268571 taccagggaccaaaacccaaacttgctatatttgcagggattaaaaacatattttag 45268627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 53121360 - 53121304
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  53121360 taccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 53121304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 808
Target Start/End: Complemental strand, 42446577 - 42446528
Alignment:
Q  759 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 42446528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 808
Target Start/End: Complemental strand, 46026130 - 46026078
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  46026130 agggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 46026078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 48033116 - 48033060
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||    
T  48033116 taccagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttag 48033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 52708618 - 52708674
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  52708618 taccagagaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 52708674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 757 - 808
Target Start/End: Original strand, 38505585 - 38505636
Alignment:
Q  757 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  38505585 gggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttag 38505636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 756 - 818
Target Start/End: Complemental strand, 9855232 - 9855170
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||||||| |||||||||| |||||| |||||||||||| |||||||||| | |||||||    
T  9855232 agggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttagccattatttt 9855170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 756 - 814
Target Start/End: Original strand, 40477379 - 40477437
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    |||||||||||||||||||||  ||||||||||||| ||||| |||||||||| |||||    
T  40477379 agggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttagccttta 40477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 752 - 805
Target Start/End: Original strand, 977847 - 977900
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  977847 taccaaggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatattt 977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 759 - 808
Target Start/End: Complemental strand, 40476272 - 40476223
Alignment:
Q  759 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  40476272 gaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 40476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 3416553 - 3416497
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| ||||||| || |||||| |||||||||||| ||||||||||    
T  3416553 taccagggaccaaaaaccaaacttgctatatttacagggatcaaaatcatattttag 3416497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 42447788 - 42447844
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||  || |||||||||| ||||||| ||||||||||    
T  42447788 taccagggaccaaaacccaaactaaccgtatttgcaggaatcaaaagcatattttag 42447844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 46104401 - 46104345
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| ||||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  46104401 taccagggacaaaaactcaaactcgctatatttgcagggaccaaaatcatattttag 46104345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 47433810 - 47433866
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  47433810 taccagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttag 47433866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 756 - 808
Target Start/End: Original strand, 54437472 - 54437524
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  54437472 agggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 54437524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 752 - 807
Target Start/End: Complemental strand, 22508793 - 22508738
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||| |||||||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  22508793 taccaaggaccaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 22508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 764 - 807
Target Start/End: Complemental strand, 42444083 - 42444040
Alignment:
Q  764 aaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||||||||| |||||||||||||||| |||||||||||||||    
T  42444083 aaacccaaacttgccatatttgcagggaccaaaaacatatttta 42444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 752 - 814
Target Start/End: Complemental strand, 39819370 - 39819308
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    |||||||||||||||  ||||||||| |||||||||||||  |||| |||||||||| |||||    
T  39819370 taccagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttaggcttta 39819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 756 - 818
Target Start/End: Original strand, 41780813 - 41780875
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||| ||||||||||| || ||||||  |||||||||||||||||||||| |||| ||||    
T  41780813 agggaccgaaacccaaacttgctatatttttagggatcaaaaacatattttagcctttttttt 41780875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 976838 - 976782
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| |||||  ||| |||| ||||||||||||||||||| ||||||||||    
T  976838 taccagggactaaaacttaaattcgctatatttgcagggatcaaaagcatattttag 976782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 32635652 - 32635596
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||| |||||||||    
T  32635652 taccagggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttag 32635596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 32637189 - 32637245
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||||||||||||||| | |||| |||||| ||||| ||||||||||    
T  32637189 taccaggaaccaaaacccaaactcgctacatttacagggaccaaaagcatattttag 32637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 43641201 - 43641145
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||| || |||||||||| |||||||||||||  |||| ||||||||||    
T  43641201 taccagggaccataatccaaactcgctatatttgcagggactaaaagcatattttag 43641145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 46027418 - 46027474
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||  ||||||||| ||||||||||||| |||||  |||||||||    
T  46027418 taccagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttag 46027474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 757 - 817
Target Start/End: Complemental strand, 51004195 - 51004135
Alignment:
Q  757 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 817  Q
    |||||||||||||||| ||||||||||| |||||   ||||||||||||||| || |||||    
T  51004195 gggaccaaaacccaaattcgccatatttacagggtctaaaaacatattttagcctatattt 51004135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 755 - 807
Target Start/End: Complemental strand, 52707591 - 52707539
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||||||||||| |||| |||| ||||||||| ||| |||||||||||||||    
T  52707591 cagggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 754 - 800
Target Start/End: Complemental strand, 20644621 - 20644575
Alignment:
Q  754 ccagggaccaaaacccaaactcgccatatttgcagggatcaaaaaca 800  Q
    ||||||||||||||| ||||  | |||||||||||||||||||||||    
T  20644621 ccagggaccaaaaccaaaacgagacatatttgcagggatcaaaaaca 20644575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 813
Target Start/End: Original strand, 43441548 - 43441606
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| ||||    
T  43441548 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttagccttt 43441606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 772 - 817
Target Start/End: Original strand, 3417813 - 3417858
Alignment:
Q  772 actcgccatatttgcagggatcaaaaacatattttagtctttattt 817  Q
    ||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  3417813 actcgccatatttacagggaccaaaaacatattttagccttgattt 3417858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 800
Target Start/End: Original strand, 8555193 - 8555238
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaaca 800  Q
    |||||||||||||| ||||  | |||||||||||||||||||||||    
T  8555193 cagggaccaaaaccaaaacaagacatatttgcagggatcaaaaaca 8555238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 752 - 819
Target Start/End: Complemental strand, 41693703 - 41693636
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 819  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  41693703 taccagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttagcctttaattta 41693636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 35212126 - 35212070
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  35212126 taccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 35212070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 752 - 814
Target Start/End: Complemental strand, 24195665 - 24195603
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  24195665 taccagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccttta 24195603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 17066483 - 17066427
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  17066483 taccagggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttag 17066427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 41694956 - 41695012
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  41694956 taccagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttag 41695012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 752 - 814
Target Start/End: Complemental strand, 42255016 - 42254954
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||| |||||||||| |||||    
T  42255016 taccagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttagccttta 42254954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 13419008 - 13418952
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  13419008 taccagggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttag 13418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 31848145 - 31848201
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||    
T  31848145 taccagggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttag 31848201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 752 - 807
Target Start/End: Original strand, 12385708 - 12385763
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||    
T  12385708 taccagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 752 - 807
Target Start/End: Complemental strand, 38742239 - 38742184
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  38742239 taccggggaccaaaacccaaactcgctatatttgcagggactaaaaacatatttta 38742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 808
Target Start/End: Original strand, 31489942 - 31489992
Alignment:
Q  758 ggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  31489942 ggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttag 31489992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 756 - 808
Target Start/End: Original strand, 5611512 - 5611564
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  5611512 agggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 5611564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 820
Target Start/End: Original strand, 28462629 - 28462697
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    ||||||||| ||||||||||| ||| ||||||||||| || ||||| ||||||||||| ||| ||||||    
T  28462629 taccagggatcaaaacccaaattcgtcatatttgcagagaccaaaagcatattttagtattttttttaa 28462697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 756 - 808
Target Start/End: Complemental strand, 31853602 - 31853550
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||| |||||||| | ||||||||||||| ||||||||||||||||    
T  31853602 agggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttag 31853550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 32197910 - 32197966
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| ||||||||||||||| |||| ||||||||||||| ||||| ||||||||||    
T  32197910 taccaaggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttag 32197966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 760 - 808
Target Start/End: Original strand, 39619800 - 39619848
Alignment:
Q  760 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttag 39619848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 752 - 807
Target Start/End: Original strand, 11217072 - 11217127
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||||||||||||||  ||||||||| ||||||||||||| ||||| |||||||||    
T  11217072 taccagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 752 - 807
Target Start/End: Original strand, 32544775 - 32544830
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||| ||||||||||||||| |||| ||||||||||||| ||||| |||||||||    
T  32544775 taccaaggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 808
Target Start/End: Complemental strand, 36748250 - 36748200
Alignment:
Q  757 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  36748250 gggaccaaaacccaaactctc-atatttgcagggaccaaaaacatattttag 36748200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 760 - 807
Target Start/End: Complemental strand, 43066051 - 43066004
Alignment:
Q  760 accaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  43066051 accaaaactcaaactcgctatatttgcagggataaaaaacatatttta 43066004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 756 - 818
Target Start/End: Original strand, 36749252 - 36749314
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    |||||||||||| |||||||| ||||||||||  || |||||||||||||||| |||| ||||    
T  36749252 agggaccaaaactcaaactcgtcatatttgcaatgaccaaaaacatattttagcctttttttt 36749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 32196739 - 32196686
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||| |||||  ||| ||||||||||||| ||||||||||||||||    
T  32196739 cagggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttag 32196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 752 - 805
Target Start/End: Complemental strand, 39618713 - 39618661
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||||||||||||||||||||||||||| ||||||  || |||||||||||||    
T  39618713 taccagggaccaaaacccaaactcgccatttttgcataga-caaaaacatattt 39618661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 757 - 813
Target Start/End: Complemental strand, 554298 - 554242
Alignment:
Q  757 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||||||||||||||||| ||||||||||||| ||| |  ||||||||| ||||    
T  554298 gggaccaaaacccaaactcgctatatttgcagggaccaatattatattttagccttt 554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 12933477 - 12933421
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||  ||||||| | ||||||||||||| ||||| ||||||||||    
T  12933477 taccagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttag 12933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 24197104 - 24197160
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  24197104 taccaggaaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 24197160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 25046241 - 25046297
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| ||||||||| | |||||||||||||||||| ||| ||||| ||||||||||    
T  25046241 taccatggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttag 25046297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 40576824 - 40576768
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| |||||||| ||||| ||| |||||||||||||| ||||| ||||||||||    
T  40576824 taccagagaccaaaatccaaattcgtcatatttgcagggaccaaaagcatattttag 40576768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 796
Target Start/End: Original strand, 42255903 - 42255947
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaa 796  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||    
T  42255903 taccagggaccaaaactcaaactcgtcatatttgcagggaccaaa 42255947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 804
Target Start/End: Original strand, 43869913 - 43869965
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatt 804  Q
    ||||||||||||||||||||| | || ||||||||||||| ||||| ||||||    
T  43869913 taccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 752 - 807
Target Start/End: Complemental strand, 5610214 - 5610159
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||||| ||| |||||||||| |||  ||||||||||||||||||| |||||||||    
T  5610214 taccagagactaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 5610159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 755 - 818
Target Start/End: Original strand, 25988694 - 25988757
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||||    
T  25988694 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatttt 25988757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 778 - 813
Target Start/End: Original strand, 28263039 - 28263074
Alignment:
Q  778 catatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||||||||||||||||| |||||||||||||||    
T  28263039 catatttgcagggatcaaaaccatattttagtcttt 28263074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 755 - 814
Target Start/End: Original strand, 44568635 - 44568694
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| |||||    
T  44568635 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttagccttta 44568694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 778 - 828
Target Start/End: Original strand, 8555767 - 8555817
Alignment:
Q  778 catatttgcagggatcaaaaacatattttagtctttattttaaaatgtcat 828  Q
    ||||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  8555767 catatttgcagggactaaaaccatattttagcctttattttaaaatatcat 8555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 816
Target Start/End: Original strand, 1614849 - 1614910
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  1614849 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 1614910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 756 - 821
Target Start/End: Complemental strand, 11766971 - 11766906
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaaa 821  Q
    |||||| |||||| ||||  | |||||||||||||| ||||| ||||||||| ||||| |||||||    
T  11766971 agggacgaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttaatcttttttttaaa 11766906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 805
Target Start/End: Complemental strand, 25037808 - 25037755
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    |||||||||||||||  |||||||| ||||||||||||||  |||| |||||||    
T  25037808 taccagggaccaaaattcaaactcgtcatatttgcagggactaaaatcatattt 25037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 9e-21; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 46075051 - 46075107
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46075051 taccagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 46075107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 756 - 808
Target Start/End: Complemental strand, 24609973 - 24609921
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24609973 agggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttag 24609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 752 - 813
Target Start/End: Original strand, 9774889 - 9774950
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  9774889 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagccttt 9774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 816
Target Start/End: Complemental strand, 11710611 - 11710547
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    |||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| |||||||    
T  11710611 taccagggaccaaaacccaacctcgttatatttacagggatcaaaaacatattttagcctttatt 11710547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 27262966 - 27262910
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  27262966 taccagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttag 27262910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 27264217 - 27264273
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  27264217 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 27264273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 39163025 - 39163081
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  39163025 taccagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttag 39163081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 752 - 814
Target Start/End: Complemental strand, 47038924 - 47038862
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    ||||||||||||||||||||||| || |||||||||||||  ||||||||||||||| |||||    
T  47038924 taccagggaccaaaacccaaactagctatatttgcagggactaaaaacatattttagccttta 47038862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 48588965 - 48589018
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  48588965 cagggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttag 48589018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 48594052 - 48594105
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  48594052 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttag 48594105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 48598663 - 48598716
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  48598663 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttag 48598716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 23469970 - 23470026
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  23469970 taccagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttag 23470026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 24611118 - 24611174
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| |||||||| ||||||| |||||| ||||||||||||||||    
T  24611118 taccagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttag 24611174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 35721159 - 35721103
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||    
T  35721159 taccagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttag 35721103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 37395691 - 37395635
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  37395691 taccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 37395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 50164461 - 50164405
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  50164461 taccaaggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttag 50164405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 752 - 807
Target Start/End: Complemental strand, 9774095 - 9774040
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  9774095 taccagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 752 - 815
Target Start/End: Original strand, 20723689 - 20723752
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttat 815  Q
    |||||||||| ||||| |||| |||| ||||||||||||| |||||||||||||||| ||||||    
T  20723689 taccagggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcctttat 20723752  T

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Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 11711255 - 11711310
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||    
T  11711255 taccagggaccaaa-cccaaattcgctatatttgcagggaccaaaaacatattttag 11711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 13074575 - 13074631
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| |||||||| |||||||||||| | |||||| |||||||||    
T  13074575 taccagggaccaaaactcaaactcgtcatatttgcaggaaccaaaaatatattttag 13074631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 20722530 - 20722474
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||| || |||||||    
T  20722530 taccagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttag 20722474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 24427370 - 24427426
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| ||||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  24427370 taccagggactaaaactcaaactcgctatatttgtagggaccaaaaacatattttag 24427426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 26863918 - 26863862
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| |||| |||| ||||||||||||| |||||||| |||||||    
T  26863918 taccagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttag 26863862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 46073943 - 46073887
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| |||||||||| | || ||||||||||||||||||| ||||||||||    
T  46073943 taccagggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttag 46073887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 762 - 808
Target Start/End: Original strand, 2604138 - 2604184
Alignment:
Q  762 caaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||    
T  2604138 caaaacccaaactccccatatttgcagggactaaaaacatattttag 2604184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 752 - 805
Target Start/End: Complemental strand, 17976819 - 17976766
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||||| |||||||    
T  17976819 taccagggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatattt 17976766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 752 - 805
Target Start/End: Original strand, 17977560 - 17977613
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||| ||||||||||||||| |||| ||||||||||||| ||||| |||||||    
T  17977560 taccaaggaccaaaacccaaattcgctatatttgcagggaccaaaaccatattt 17977613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 752 - 805
Target Start/End: Original strand, 27816721 - 27816774
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||||||||||||||||||| | || ||||||||||||| ||||| |||||||    
T  27816721 taccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 778 - 818
Target Start/End: Original strand, 25658269 - 25658309
Alignment:
Q  778 catatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  25658269 catatttgcagggatcaaaagaatattttagtctttatttt 25658309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 34934748 - 34934804
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| ||||||||||||||| |||| |||||||||||||  |||| ||||||||||    
T  34934748 taccaaggaccaaaacccaaattcgctatatttgcagggacaaaaagcatattttag 34934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 35722286 - 35722342
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| |||||||| ||||| |||| |||||| |||||| ||||||||||||||||    
T  35722286 taccagagaccaaaatccaaattcgctatatttacagggaccaaaaacatattttag 35722342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 35911889 - 35911945
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| ||||||||| ||||| |||| ||||||||||||| ||||| ||||||||||    
T  35911889 taccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 35911945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 37396841 - 37396897
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| |||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  37396841 taccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 37396897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 755 - 818
Target Start/End: Original strand, 33000614 - 33000677
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||||    
T  33000614 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctttatttt 33000677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 752 - 819
Target Start/End: Complemental strand, 45290515 - 45290448
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 819  Q
    |||||||||| |||||| ||||  | ||||||||||||||  |||| |||||||||| ||||||||||    
T  45290515 taccagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctttatttta 45290448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 761 - 808
Target Start/End: Original strand, 45979506 - 45979553
Alignment:
Q  761 ccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 45979553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 755 - 810
Target Start/End: Complemental strand, 51240174 - 51240119
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 810  Q
    |||||| ||||| ||||| |||| |||||||||| || ||||||||||||||||||    
T  51240174 cagggatcaaaatccaaattcgctatatttgcagagaccaaaaacatattttagtc 51240119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 813
Target Start/End: Original strand, 10631473 - 10631531
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| |||||||||| ||||    
T  10631473 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagccttt 10631531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 805
Target Start/End: Complemental strand, 28198485 - 28198435
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||||||||||  ||||||||||||||||||| ||| |||||||| ||||    
T  28198485 cagggaccaaaattcaaactcgccatatttgcaaggaacaaaaacacattt 28198435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 762 - 808
Target Start/End: Complemental strand, 48856260 - 48856214
Alignment:
Q  762 caaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||||||    
T  48856260 caaaacctaaactcaccatatttgcaaggattaaaaacatattttag 48856214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 800
Target Start/End: Complemental strand, 12360718 - 12360673
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaaca 800  Q
    |||||||||||||| ||||  | |||||||||||||||||||||||    
T  12360718 cagggaccaaaaccaaaacgggacatatttgcagggatcaaaaaca 12360673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 778 - 815
Target Start/End: Original strand, 17130051 - 17130088
Alignment:
Q  778 catatttgcagggatcaaaaacatattttagtctttat 815  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  17130051 catatttgcagggaccaaaaccatattttagtctttat 17130088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 24507534 - 24507481
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  24507534 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttag 24507481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 805
Target Start/End: Complemental strand, 27815499 - 27815446
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||||||||||||||||||| | || ||||||||||||| || || |||||||    
T  27815499 taccagggaccaaaacccaaattggctatatttgcagggaccagaaccatattt 27815446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 39162882 - 39162825
Alignment:
Q  752 taccagggaccaaaacccaaactcgcca-tatttgcagggatcaaaaacatattttag 808  Q
    ||||| ||||||||| |||||||||||| |||||||||||| ||||| |||| |||||    
T  39162882 taccaaggaccaaaatccaaactcgccattatttgcagggaccaaaagcataatttag 39162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 1e-19; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 755 - 813
Target Start/End: Complemental strand, 17516217 - 17516159
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  17516217 cagggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttagtcttt 17516159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 17517310 - 17517366
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17517310 taccagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttag 17517366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 34998142 - 34998198
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34998142 taccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttag 34998198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 29291414 - 29291361
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  29291414 cagggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttag 29291361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 755 - 807
Target Start/End: Original strand, 1171655 - 1171707
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  1171655 cagggaccaaaaaccaaactcgttatatttgcagggatcaaaaacatatttta 1171707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 18810590 - 18810534
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  18810590 taccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 18810534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 21165304 - 21165248
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  21165304 taccagggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttag 21165248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 752 - 807
Target Start/End: Original strand, 3279500 - 3279555
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  3279500 taccaggaaccaaaattcaaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 1974156 - 1974209
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||    
T  1974156 cagggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttag 1974209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 752 - 813
Target Start/End: Complemental strand, 16995509 - 16995448
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||||||||||||||||| ||   ||||||||||||| |||||||||||||||| ||||    
T  16995509 taccagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttagccttt 16995448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 752 - 813
Target Start/End: Original strand, 25440674 - 25440735
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||||||||||||  ||||||||||||||||| | ||| |||||| ||||||||||||||    
T  25440674 taccagggaccaaaattcaaactcgccatatttgtaaggaccaaaaatatattttagtcttt 25440735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 20393269 - 20393325
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||  ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  20393269 taccagggactgaaacccaaattcgctatatttgcagggatcaaaagcatattttag 20393325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 763 - 815
Target Start/End: Complemental strand, 20896005 - 20895953
Alignment:
Q  763 aaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttat 815  Q
    ||||| |||| |||| ||||||||||||| |||||||||||||||||||||||    
T  20896005 aaaactcaaattcgctatatttgcagggaccaaaaacatattttagtctttat 20895953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 20897498 - 20897554
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| || | ||||||||||||| ||||| ||||||||||    
T  20897498 taccagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttag 20897554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 21953264 - 21953208
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| ||||| |||| ||||||||||||| ||||| ||||||||||    
T  21953264 taccagggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 21953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 759 - 819
Target Start/End: Original strand, 30253547 - 30253607
Alignment:
Q  759 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 819  Q
    ||||||||| || ||||||  |||||||||||| ||||||||||||||||||||| |||||    
T  30253547 gaccaaaactcatactcgctgtatttgcagggaccaaaaacatattttagtctttttttta 30253607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 34995172 - 34995116
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||||| |||| |||| ||||||||||||||||||| ||||||||||    
T  34995172 taccaggaaccaaaactcaaattcgctatatttgcagggatcaaaagcatattttag 34995116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 1972458 - 1972402
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| ||| |||||||||| ||||  |||||||||||| ||||||||||||||||    
T  1972458 taccagagactaaaacccaaattcgctttatttgcagggaccaaaaacatattttag 1972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 756 - 808
Target Start/End: Complemental strand, 3276421 - 3276369
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| |||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  3276421 agggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttag 3276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 755 - 811
Target Start/End: Complemental strand, 13617584 - 13617528
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 811  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  13617584 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagtct 13617528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 756 - 807
Target Start/End: Complemental strand, 20391268 - 20391217
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||||||||||||||| || | ||||||||||||| ||||| |||||||||    
T  20391268 agggaccaaaacccaaattcactatatttgcagggaccaaaagcatatttta 20391217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 17000281 - 17000334
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| | | ||||||||||| |||||  |||||||||    
T  17000281 cagggaccaaaacccaaactcactacatttgcagggaccaaaagtatattttag 17000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 778 - 819
Target Start/End: Complemental strand, 19320799 - 19320758
Alignment:
Q  778 catatttgcagggatcaaaaacatattttagtctttatttta 819  Q
    |||||||||||||| ||||| |||||||||||| ||||||||    
T  19320799 catatttgcagggaccaaaaccatattttagtcattatttta 19320758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 31198670 - 31198617
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| ||||||||||    
T  31198670 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 31198617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 1e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 752 - 814
Target Start/End: Complemental strand, 3936636 - 3936574
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  3936636 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccttta 3936574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 3205103 - 3205162
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 811  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  3205103 taccagggaccaaaacccaaactcatcatatttgcagggatcaaaagcatattttagtct 3205162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 752 - 813
Target Start/End: Original strand, 27571130 - 27571191
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  27571130 taccagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttagccttt 27571191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 4565451 - 4565395
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||||||||||||||    
T  4565451 taccagggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttag 4565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 6894011 - 6894067
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||| ||||||| |||||||||| ||| ||||||||||||||||    
T  6894011 taccagggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttag 6894067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 756 - 811
Target Start/End: Original strand, 15604063 - 15604117
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 811  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  15604063 agggaccaaaacccaaactcgccatatttgca-ggaccaaaaacacattttagtct 15604117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 751 - 808
Target Start/End: Complemental strand, 14809222 - 14809165
Alignment:
Q  751 ctaccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||| ||||||||||| ||||| |||| ||||||| ||||||||||||||||||||||    
T  14809222 ctactagggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 3954110 - 3954054
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||  ||||||||| ||| ||||||||||||||||    
T  3954110 taccagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttag 3954054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 31540554 - 31540498
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| ||||||||||||| |||  ||||||||||||| ||||||||||||||||    
T  31540554 taccaggtaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttag 31540498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 31541623 - 31541679
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| |||||| ||| |||  ||||||||||||||||||||||||||||||    
T  31541623 taccagggacaaaaaccaaaattcgttatatttgcagggatcaaaaacatattttag 31541679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 808
Target Start/End: Complemental strand, 15599818 - 15599767
Alignment:
Q  757 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| |||||||||||| ||||| ||||| ||||||||||    
T  15599818 gggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttag 15599767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 756 - 813
Target Start/End: Original strand, 34911833 - 34911890
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||| ||||| |||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  34911833 agggatcaaaatccaaactcgctatatttgcagggaccaaaatcatattttagccttt 34911890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 3938061 - 3938117
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||| ||||| || |||||||||||||  |||| ||||||||||    
T  3938061 taccagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttag 3938117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 760 - 808
Target Start/End: Complemental strand, 27097362 - 27097314
Alignment:
Q  760 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||  |||||||| | |||||||||||||||||||||    
T  27097362 accaaaacccaaacttaccatatttacggggatcaaaaacatattttag 27097314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 757 - 808
Target Start/End: Complemental strand, 27570109 - 27570058
Alignment:
Q  757 gggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||| |||||||||||||||| ||||||||| ||| ||||| ||||||||||    
T  27570109 gggaacaaaacccaaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 813
Target Start/End: Original strand, 6912802 - 6912860
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||||||||    
T  6912802 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagtcttt 6912860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 770 - 808
Target Start/End: Complemental strand, 25252681 - 25252643
Alignment:
Q  770 aaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  25252681 aaactcgctatatttgcagagatcaaaaacatattttag 25252643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 752 - 818
Target Start/End: Original strand, 25254132 - 25254198
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||||| |||||| |||||||   ||||||||||||| ||||| ||||||||||| || |||||    
T  25254132 taccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagttttaatttt 25254198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 770 - 808
Target Start/End: Complemental strand, 25316466 - 25316428
Alignment:
Q  770 aaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  25316466 aaactcgctatatttgcagagatcaaaaacatattttag 25316428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 752 - 818
Target Start/End: Original strand, 25317922 - 25317988
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||||| |||||| |||||||   ||||||||||||| ||||| ||||||||||| || |||||    
T  25317922 taccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagttttaatttt 25317988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 817
Target Start/End: Original strand, 40764725 - 40764787
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 817  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| ||||||||    
T  40764725 cagggactaaaaccaaaacgaggcatatttgcagggagcaaaaccatattttagcctttattt 40764787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 820
Target Start/End: Complemental strand, 19565522 - 19565457
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| ||| |||||||    
T  19565522 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagccttgattttaa 19565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 759 - 808
Target Start/End: Complemental strand, 34910643 - 34910595
Alignment:
Q  759 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||| |||||| || |||||||||||||| |||||||||||||||    
T  34910643 gaccaaaactcaaacttgctatatttgcagggat-aaaaacatattttag 34910595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 6e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 752 - 813
Target Start/End: Original strand, 22534723 - 22534784
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  22534723 taccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagccttt 22534784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 752 - 819
Target Start/End: Original strand, 10718449 - 10718516
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttta 819  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| || |||||||    
T  10718449 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcctatatttta 10718516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 755 - 811
Target Start/End: Complemental strand, 3483688 - 3483632
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 811  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  3483688 cagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagtct 3483632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 10717179 - 10717123
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  10717179 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 10717123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 756 - 808
Target Start/End: Complemental strand, 14197879 - 14197827
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  14197879 agggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttag 14197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 17032100 - 17032022
Alignment:
Q  360 ttgtaacaatctttttgttattagtgctttataattttccttttaaattacatttcaattttctaactctttaaatttctc 440  Q
    |||||||  |||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  17032100 ttgtaactctcttttagttattagtg-tttataatttgccttttaaaatacatttcaattttctaact-tttaaatttctc 17032022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 17562536 - 17562458
Alignment:
Q  360 ttgtaacaatctttttgttattagtgctttataattttccttttaaattacatttcaattttctaactctttaaatttctc 440  Q
    |||||||  |||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  17562536 ttgtaactctcttttagttattagtg-tttataatttgccttttaaaatacatttcaattttctaact-tttaaatttctc 17562458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 756 - 808
Target Start/End: Original strand, 28997998 - 28998050
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  28997998 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 28998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 752 - 813
Target Start/End: Complemental strand, 36588280 - 36588219
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  36588280 taccagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttagccttt 36588219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 28996892 - 28996836
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  28996892 taccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 28996836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 753 - 808
Target Start/End: Original strand, 45517962 - 45518017
Alignment:
Q  753 accagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||    
T  45517962 accagggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttag 45518017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 1420446 - 1420499
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| | |||||||||| ||||||||||||| ||||||||||||||||    
T  1420446 cagggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttag 1420499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 752 - 813
Target Start/End: Complemental strand, 22533375 - 22533314
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||||||||||||||||||||||| |||| | |||||| ||||| |||||||||| ||||    
T  22533375 taccagggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttagccttt 22533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 39440426 - 39440479
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  39440426 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttag 39440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 4182680 - 4182624
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||| |||||| |||||| ||||| ||||||||||    
T  4182680 taccagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttag 4182624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 22271001 - 22270945
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||||||    
T  22271001 taccagggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttag 22270945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 22272271 - 22272327
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||| ||||||||||    
T  22272271 taccagggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttag 22272327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 39439982 - 39439926
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||| ||||||| |||||| |||||||||||||||| ||||| ||||||||||    
T  39439982 taccagggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttag 39439926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 755 - 818
Target Start/End: Complemental strand, 10872970 - 10872907
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| |||||||||    
T  10872970 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttagcctttatttt 10872907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 3680746 - 3680799
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||| ||||  | |||||||||||||||||||| ||||||||||    
T  3680746 cagggaccaaaaccaaaacgaggcatatttgcagggatcaaaatcatattttag 3680799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 422
Target Start/End: Original strand, 17030575 - 17030627
Alignment:
Q  369 tctttttgttattagtgctttataattttccttttaaattacatttcaattttc 422  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  17030575 tcttttagttattagtg-tttataattttccttttaaaatacatttcagttttc 17030627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 422
Target Start/End: Original strand, 17561011 - 17561063
Alignment:
Q  369 tctttttgttattagtgctttataattttccttttaaattacatttcaattttc 422  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  17561011 tcttttagttattagtg-tttataattttccttttaaaatacatttcagttttc 17561063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 752 - 813
Target Start/End: Complemental strand, 45516455 - 45516394
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||| |||||||||||||| |||| |||||| || |||  ||||||||||||||||||||    
T  45516455 taccagagaccaaaacccaaattcgctatatttacatggactaaaaacatattttagtcttt 45516394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 3031544 - 3031600
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||| |||   ||||||||| |||||| ||||||||||||||||    
T  3031544 taccagggaccaaaacctaaatgagccatatttacagggaccaaaaacatattttag 3031600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 4183980 - 4184036
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||| | | |||||||||||||  |||| ||||||||||    
T  4183980 taccagggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttag 4184036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 756 - 820
Target Start/End: Original strand, 27117922 - 27117986
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    ||||||||||||| |||   | |||||||||||||| ||||| |||||||||| |||||||||||    
T  27117922 agggaccaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagcctttattttaa 27117986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 30124224 - 30124280
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| |||||| ||  |||||||||||| ||||| ||||||||||    
T  30124224 taccagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttag 30124280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 38456731 - 38456787
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||| ||| | || ||||||||||||| ||||| ||||||||||    
T  38456731 taccagggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttag 38456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 38658539 - 38658483
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| |||| ||||||||| ||| || || ||||||||||    
T  38658539 taccagggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttag 38658483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 755 - 814
Target Start/End: Complemental strand, 20984201 - 20984142
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| |||||||||| |||||    
T  20984201 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagccttta 20984142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 760 - 807
Target Start/End: Original strand, 41357375 - 41357422
Alignment:
Q  760 accaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    |||||||||||||||| ||||||||||  ||| |||||||||||||||    
T  41357375 accaaaacccaaactcaccatatttgcgaggaccaaaaacatatttta 41357422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 756 - 810
Target Start/End: Complemental strand, 38455501 - 38455447
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtc 810  Q
    |||||||||||| |||| || | ||||||||| ||| ||||||||||||||||||    
T  38455501 agggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttagtc 38455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 805
Target Start/End: Complemental strand, 1376993 - 1376940
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||||||||||||| ||||| | || ||||||||||||| ||||| |||||||    
T  1376993 taccagggaccaaaatccaaattggctatatttgcagggaccaaaatcatattt 1376940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 805
Target Start/End: Original strand, 1385556 - 1385609
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    ||||||||||||||| ||||| | || ||||||||||||| ||||| |||||||    
T  1385556 taccagggaccaaaatccaaattggctatatttgcagggaccaaaaccatattt 1385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 4473989 - 4474042
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  4473989 cagggactaaaaccaaaacgaggcatatttgcagggatcaaaaccatattttag 4474042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 820
Target Start/End: Complemental strand, 28346449 - 28346384
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| ||| |||||||    
T  28346449 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagccttaattttaa 28346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 813
Target Start/End: Original strand, 36589388 - 36589449
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||| ||||||||||| |||||||| ||||||||||| |  |||| |||||||||| ||||    
T  36589388 taccaaggaccaaaacctaaactcgctatatttgcaggaactaaaatcatattttagccttt 36589449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 2e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 33137229 - 33137285
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33137229 taccagggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 33137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 3879144 - 3879088
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  3879144 taccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 3879088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 22204113 - 22204057
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22204113 taccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 22204057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 42359347 - 42359403
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  42359347 taccagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 42359403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 54121701 - 54121757
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  54121701 taccagggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttag 54121757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 808
Target Start/End: Original strand, 3880501 - 3880553
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  3880501 agggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttag 3880553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 816
Target Start/End: Original strand, 29060883 - 29060947
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    ||||| |||||||||  ||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  29060883 taccaaggaccaaaattcaaactcgctatatttgcagggattaaaaacatattttagcctttatt 29060947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 808
Target Start/End: Original strand, 32699319 - 32699371
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  32699319 agggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttag 32699371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 808
Target Start/End: Complemental strand, 33134945 - 33134893
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  33134945 agggaccaatatccaaactcgtcatatttgcagggatcaaaaacatattttag 33134893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 45618343 - 45618287
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||    
T  45618343 taccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattag 45618287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 752 - 807
Target Start/End: Original strand, 17371846 - 17371901
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||    
T  17371846 taccagggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 755 - 817
Target Start/End: Complemental strand, 34659761 - 34659699
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattt 817  Q
    ||||||||||||||  ||||||||||||||||||||| ||||| |||||||||| ||| ||||    
T  34659761 cagggaccaaaaccttaactcgccatatttgcagggaccaaaagcatattttagccttcattt 34659699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 759 - 812
Target Start/End: Original strand, 41935078 - 41935131
Alignment:
Q  759 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctt 812  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||    
T  41935078 gaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttaatctt 41935131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 752 - 813
Target Start/End: Original strand, 55542580 - 55542641
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    |||||||||||||| |||||||  || |||||||||||||||||||||| ||||||| ||||    
T  55542580 taccagggaccaaatcccaaacatgctatatttgcagggatcaaaaacagattttagccttt 55542641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 19674472 - 19674416
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| ||||||||| ||||||||| ||| ||||| ||||||||||    
T  19674472 taccagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttag 19674416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 760 - 808
Target Start/End: Complemental strand, 38166545 - 38166497
Alignment:
Q  760 accaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||||    
T  38166545 accaaaatccaaactcgctatatttgcagggattaaaaacatattttag 38166497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 820
Target Start/End: Complemental strand, 42358090 - 42358022
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    ||||||||| |||||| ||||||  | ||||||||||||| |||||||||||||||| |||| ||||||    
T  42358090 taccagggatcaaaactcaaacttcctatatttgcagggaccaaaaacatattttagccttttttttaa 42358022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 45619732 - 45619788
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||| ||||||| |||||||| |||||||||||||  |||||||||||||||    
T  45619732 taccagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttag 45619788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 752 - 791
Target Start/End: Complemental strand, 40198632 - 40198593
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcaggga 791  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  40198632 taccagggaccaaaacccaaactcgctatatttgcaggga 40198593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 752 - 814
Target Start/End: Complemental strand, 16573436 - 16573374
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttta 814  Q
    |||||| |||||||||||||| |||||||||||| || || ||||| |||||||||| |||||    
T  16573436 taccagagaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttagccttta 16573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 758 - 808
Target Start/End: Complemental strand, 41933870 - 41933820
Alignment:
Q  758 ggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||| |||||||||| || ||||| ||||||||||    
T  41933870 ggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttag 41933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 771 - 808
Target Start/End: Original strand, 5259171 - 5259208
Alignment:
Q  771 aactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  5259171 aactcgccatatttgcagggaccaaaaacatattttag 5259208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 19675624 - 19675677
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||| |||||||||  ||||||||||||| ||||| ||||||||||    
T  19675624 cagggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttag 19675677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 759 - 811
Target Start/End: Complemental strand, 16916118 - 16916066
Alignment:
Q  759 gaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtct 811  Q
    ||||||||| ||||||| ||||||||||||||| |||||  ||||||||||||    
T  16916118 gaccaaaactcaaactcaccatatttgcagggaccaaaagtatattttagtct 16916066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 755 - 818
Target Start/End: Complemental strand, 26412245 - 26412182
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatttt 818  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| || ||||||    
T  26412245 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttagcctatatttt 26412182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 754 - 808
Target Start/End: Complemental strand, 4211617 - 4211563
Alignment:
Q  754 ccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  4211617 ccagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 4211563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 12152438 - 12152491
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  12152438 cagggaccaaaaccaaaacgagacatatttgcagggaccaaaaccatattttag 12152491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 14487857 - 14487804
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  14487857 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 14487804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 816
Target Start/End: Original strand, 14791751 - 14791812
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  14791751 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctttatt 14791812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 813
Target Start/End: Complemental strand, 17281629 - 17281568
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||||||||||| ||||| |||| |||||||||||||  |||| || ||||||| ||||    
T  17281629 taccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagccttt 17281568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 752 - 813
Target Start/End: Complemental strand, 17370131 - 17370070
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtcttt 813  Q
    ||||||||||||||| ||||| |||| |||||||||||||  |||| || ||||||| ||||    
T  17370131 taccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagccttt 17370070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 23245540 - 23245593
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  23245540 cagggactaaaaccaaaacgagacatatttgcagggatcaaaaccatattttag 23245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 26412529 - 26412582
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||| |||||| ||||  |||||||||||||||| ||||| ||||||||||    
T  26412529 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 26412582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 816
Target Start/End: Original strand, 30046737 - 30046798
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  30046737 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 30046798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 816
Target Start/End: Original strand, 30061078 - 30061139
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  30061078 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 30061139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 763 - 808
Target Start/End: Complemental strand, 32698046 - 32698001
Alignment:
Q  763 aaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||| ||| |||| ||||||||||||||||||| ||||||||||    
T  32698046 aaaacctaaattcgctatatttgcagggatcaaaatcatattttag 32698001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 816
Target Start/End: Original strand, 43231334 - 43231395
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  43231334 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctttatt 43231395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 46292447 - 46292394
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||| ||||  | |||||||||||||| ||||| ||||||||||    
T  46292447 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 46292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 1e-16; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 752 - 805
Target Start/End: Complemental strand, 344995 - 344942
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattt 805  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  344995 taccagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatattt 344942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 756 - 808
Target Start/End: Complemental strand, 374389 - 374337
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  374389 agggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttag 374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 756 - 808
Target Start/End: Original strand, 345902 - 345954
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  345902 agggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttag 345954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 763 - 808
Target Start/End: Original strand, 376381 - 376426
Alignment:
Q  763 aaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttag 376426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 45; Significance: 5e-16; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 9980 - 9924
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  9980 taccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 9924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 11523 - 11579
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  11523 taccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 11579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 10373 - 10317
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||| |||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  10373 taccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 10317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 432 - 488
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  432 taccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 30908 - 30964
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  30908 taccagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttag 30964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 29787 - 29731
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||||| |||||||||   |||||||||||| ||||| ||||||||||    
T  29787 taccagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttag 29731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 752 - 808
Target Start/End: Original strand, 120986 - 121042
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||    
T  120986 taccagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttag 121042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 119651 - 119595
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||| ||||||||||    
T  119651 taccagggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 119595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 42759 - 42812
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  42759 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttag 42812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 756 - 808
Target Start/End: Original strand, 1140 - 1192
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||||||||||| |||||||||||||||||||| || |||||| |||||||||    
T  1140 agggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttag 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 202637 - 202581
Alignment:
Q  752 taccagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttag 808  Q
    |||| |||||||||| |||||||||  ||||||||||||| ||||| ||||||||||    
T  202637 tacccgggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttag 202581  T

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Target: scaffold0765 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 756 - 807
Target Start/End: Complemental strand, 1914 - 1863
Alignment:
Q  756 agggaccaaaacccaaactcgccatatttgcagggatcaaaaacatatttta 807  Q
    ||||| |||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  1914 agggatcaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 1863  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 778 - 820
Target Start/End: Complemental strand, 21728 - 21686
Alignment:
Q  778 catatttgcagggatcaaaaacatattttagtctttattttaa 820  Q
    |||||||||||||||||||| |||||||||| |||| ||||||    
T  21728 catatttgcagggatcaaaaccatattttagccttttttttaa 21686  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 755 - 816
Target Start/End: Complemental strand, 47980 - 47919
Alignment:
Q  755 cagggaccaaaacccaaactcgccatatttgcagggatcaaaaacatattttagtctttatt 816  Q
    ||||||| |||||| ||||  | |||||||||||||| ||||| |||||||||| |||||||    
T  47980 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctttatt 47919  T

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