View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18451_low_10 (Length: 201)

Name: NF18451_low_10
Description: NF18451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18451_low_10
NF18451_low_10
[»] chr8 (24 HSPs)
chr8 (124-187)||(35923323-35923386)
chr8 (1-106)||(43857768-43857873)
chr8 (1-103)||(7050467-7050569)
chr8 (1-102)||(27696980-27697081)
chr8 (1-101)||(10496003-10496103)
chr8 (1-101)||(34181154-34181254)
chr8 (43-101)||(4528641-4528699)
chr8 (43-102)||(10837524-10837583)
chr8 (43-98)||(32924047-32924102)
chr8 (43-86)||(42686038-42686081)
chr8 (43-101)||(17696956-17697014)
chr8 (1-78)||(10495745-10495822)
chr8 (1-102)||(30795091-30795192)
chr8 (46-102)||(2705162-2705218)
chr8 (43-98)||(9855662-9855717)
chr8 (43-101)||(2057079-2057137)
chr8 (43-101)||(2232977-2233035)
chr8 (43-101)||(37405873-37405931)
chr8 (1-78)||(17696633-17696710)
chr8 (47-78)||(2232755-2232786)
chr8 (47-78)||(4528975-4529006)
chr8 (59-100)||(32539146-32539187)
chr8 (50-103)||(41441636-41441689)
chr8 (43-111)||(42216245-42216313)
[»] chr7 (27 HSPs)
chr7 (1-109)||(41320652-41320760)
chr7 (1-105)||(38816542-38816646)
chr7 (1-103)||(21766506-21766608)
chr7 (1-103)||(39997642-39997744)
chr7 (1-101)||(6626166-6626266)
chr7 (1-103)||(18732636-18732738)
chr7 (43-101)||(35193674-35193732)
chr7 (49-109)||(2765300-2765360)
chr7 (1-101)||(47404163-47404263)
chr7 (1-104)||(26174612-26174715)
chr7 (43-101)||(6607876-6607934)
chr7 (1-103)||(44141407-44141509)
chr7 (1-102)||(8952724-8952825)
chr7 (43-102)||(19277000-19277059)
chr7 (46-101)||(23999921-23999976)
chr7 (43-97)||(24164017-24164071)
chr7 (44-98)||(31849440-31849494)
chr7 (1-103)||(36508345-36508447)
chr7 (44-101)||(10336120-10336176)
chr7 (1-79)||(47913141-47913221)
chr7 (43-99)||(39103057-39103113)
chr7 (1-103)||(21276577-21276679)
chr7 (44-103)||(21438241-21438299)
chr7 (43-101)||(38567498-38567556)
chr7 (44-98)||(48863287-48863341)
chr7 (46-78)||(11638339-11638371)
chr7 (47-79)||(48863504-48863536)
[»] chr5 (30 HSPs)
chr5 (1-101)||(39412152-39412252)
chr5 (1-110)||(11062339-11062448)
chr5 (1-103)||(5214264-5214366)
chr5 (1-101)||(38789949-38790049)
chr5 (44-109)||(4621026-4621091)
chr5 (1-98)||(26408950-26409047)
chr5 (1-102)||(38245054-38245155)
chr5 (1-101)||(23910613-23910713)
chr5 (44-104)||(34929535-34929595)
chr5 (43-102)||(16968713-16968772)
chr5 (1-103)||(17964962-17965064)
chr5 (43-101)||(22619788-22619846)
chr5 (1-78)||(23910318-23910395)
chr5 (43-103)||(2268609-2268669)
chr5 (44-100)||(8343043-8343099)
chr5 (1-101)||(18036219-18036319)
chr5 (45-101)||(18674205-18674261)
chr5 (46-101)||(8145030-8145085)
chr5 (43-102)||(15440519-15440578)
chr5 (43-109)||(30491885-30491951)
chr5 (44-101)||(2033738-2033795)
chr5 (1-110)||(4717126-4717235)
chr5 (1-102)||(25945640-25945741)
chr5 (43-103)||(20166060-20166120)
chr5 (43-98)||(3578002-3578057)
chr5 (44-110)||(974182-974248)
chr5 (1-102)||(18705807-18705908)
chr5 (47-78)||(5214596-5214627)
chr5 (47-78)||(23592811-23592842)
chr5 (47-79)||(13198243-13198275)
[»] chr1 (39 HSPs)
chr1 (1-107)||(5132420-5132526)
chr1 (1-103)||(38872508-38872610)
chr1 (1-110)||(28486611-28486720)
chr1 (1-99)||(38019278-38019376)
chr1 (1-103)||(47648170-47648272)
chr1 (1-102)||(14291250-14291351)
chr1 (1-102)||(23253639-23253740)
chr1 (1-106)||(50755973-50756078)
chr1 (1-101)||(1342746-1342846)
chr1 (43-103)||(1366300-1366360)
chr1 (1-102)||(2937091-2937191)
chr1 (1-101)||(6782566-6782666)
chr1 (43-99)||(17077684-17077740)
chr1 (43-103)||(44396397-44396457)
chr1 (1-101)||(45951218-45951318)
chr1 (43-102)||(5905088-5905147)
chr1 (47-102)||(25378687-25378742)
chr1 (1-100)||(47672257-47672356)
chr1 (1-103)||(28838099-28838201)
chr1 (46-111)||(29548571-29548636)
chr1 (47-104)||(30057287-30057344)
chr1 (1-102)||(32487175-32487276)
chr1 (1-102)||(37350939-37351040)
chr1 (43-102)||(2731063-2731122)
chr1 (44-99)||(36466292-36466347)
chr1 (43-102)||(39950231-39950290)
chr1 (43-102)||(40125138-40125197)
chr1 (43-105)||(44519694-44519756)
chr1 (1-78)||(5132644-5132721)
chr1 (43-108)||(38717319-38717384)
chr1 (43-103)||(49628447-49628507)
chr1 (46-98)||(4487039-4487091)
chr1 (1-109)||(14556326-14556434)
chr1 (43-83)||(30056945-30056985)
chr1 (47-78)||(38872868-38872899)
chr1 (44-98)||(36302784-36302838)
chr1 (43-100)||(29715741-29715798)
chr1 (43-108)||(29721441-29721506)
chr1 (47-103)||(6782920-6782976)
[»] chr6 (26 HSPs)
chr6 (1-102)||(16408737-16408838)
chr6 (43-109)||(9566399-9566465)
chr6 (1-102)||(33360763-33360864)
chr6 (43-105)||(14630809-14630871)
chr6 (43-101)||(32218842-32218900)
chr6 (1-102)||(10143526-10143627)
chr6 (1-101)||(33705801-33705901)
chr6 (43-101)||(21002768-21002826)
chr6 (1-98)||(6390226-6390323)
chr6 (1-102)||(22695899-22696000)
chr6 (44-100)||(6535408-6535464)
chr6 (43-103)||(12396019-12396079)
chr6 (44-104)||(33243527-33243587)
chr6 (43-102)||(605797-605856)
chr6 (43-102)||(5146817-5146876)
chr6 (43-102)||(33877788-33877847)
chr6 (1-79)||(32219159-32219237)
chr6 (43-104)||(5997548-5997609)
chr6 (1-78)||(16409054-16409131)
chr6 (47-99)||(583662-583714)
chr6 (1-78)||(2793345-2793422)
chr6 (44-101)||(3199548-3199605)
chr6 (44-101)||(21904865-21904922)
chr6 (1-78)||(22695578-22695655)
chr6 (43-78)||(3199330-3199365)
chr6 (47-83)||(1827074-1827110)
[»] chr3 (34 HSPs)
chr3 (1-102)||(44397924-44398025)
chr3 (1-108)||(11692148-11692255)
chr3 (43-110)||(29015709-29015776)
chr3 (1-100)||(47358469-47358568)
chr3 (1-106)||(21440963-21441068)
chr3 (1-107)||(38443598-38443703)
chr3 (43-102)||(21561155-21561214)
chr3 (1-100)||(23460942-23461041)
chr3 (44-103)||(55328439-55328498)
chr3 (44-102)||(27957817-27957875)
chr3 (1-103)||(35565384-35565486)
chr3 (44-102)||(40790808-40790866)
chr3 (43-109)||(47982683-47982749)
chr3 (43-109)||(47991970-47992036)
chr3 (43-109)||(48001257-48001323)
chr3 (43-109)||(48010544-48010610)
chr3 (43-109)||(49665651-49665717)
chr3 (1-102)||(29352635-29352736)
chr3 (1-98)||(31705206-31705303)
chr3 (1-102)||(44638412-44638513)
chr3 (44-99)||(16731921-16731976)
chr3 (43-102)||(33092033-33092092)
chr3 (1-103)||(40036644-40036746)
chr3 (1-101)||(3017251-3017352)
chr3 (1-102)||(51753894-51753995)
chr3 (47-104)||(54090168-54090225)
chr3 (44-98)||(19987838-19987892)
chr3 (44-102)||(52836910-52836968)
chr3 (1-98)||(16222478-16222574)
chr3 (47-106)||(29352399-29352458)
chr3 (43-102)||(40393737-40393796)
chr3 (44-78)||(44638620-44638654)
chr3 (44-101)||(34682637-34682694)
chr3 (50-78)||(55328800-55328828)
[»] chr2 (38 HSPs)
chr2 (1-108)||(970751-970858)
chr2 (43-109)||(25263704-25263770)
chr2 (1-103)||(33850767-33850869)
chr2 (1-102)||(32928027-32928128)
chr2 (43-103)||(42813873-42813933)
chr2 (43-105)||(8031067-8031129)
chr2 (1-99)||(9777285-9777383)
chr2 (1-103)||(40691394-40691496)
chr2 (43-107)||(32503973-32504037)
chr2 (1-103)||(2098290-2098392)
chr2 (43-100)||(430574-430631)
chr2 (1-100)||(3952227-3952326)
chr2 (43-102)||(18707878-18707937)
chr2 (1-79)||(32653836-32653914)
chr2 (43-109)||(34825674-34825740)
chr2 (1-98)||(18478379-18478476)
chr2 (1-98)||(18906927-18907024)
chr2 (1-101)||(14102572-14102672)
chr2 (43-102)||(14827497-14827556)
chr2 (43-86)||(42435004-42435047)
chr2 (43-101)||(4831113-4831171)
chr2 (1-111)||(5674306-5674416)
chr2 (1-87)||(11108720-11108806)
chr2 (1-103)||(41186247-41186349)
chr2 (2-75)||(19591669-19591742)
chr2 (1-78)||(4950044-4950120)
chr2 (46-102)||(11277994-11278050)
chr2 (44-104)||(16265726-16265786)
chr2 (43-99)||(45003097-45003153)
chr2 (43-78)||(5674018-5674053)
chr2 (47-78)||(16265608-16265639)
chr2 (47-78)||(28625826-28625857)
chr2 (47-78)||(41186605-41186636)
chr2 (1-79)||(8031332-8031410)
chr2 (1-103)||(14827809-14827911)
chr2 (43-104)||(7900257-7900318)
chr2 (50-78)||(3951971-3951999)
chr2 (43-98)||(3963379-3963435)
[»] chr4 (38 HSPs)
chr4 (1-103)||(1613939-1614041)
chr4 (1-108)||(321641-321748)
chr4 (1-104)||(46008544-46008647)
chr4 (1-103)||(16335371-16335473)
chr4 (1-103)||(32328347-32328449)
chr4 (1-98)||(42495933-42496030)
chr4 (1-110)||(45311548-45311657)
chr4 (43-103)||(42598908-42598968)
chr4 (1-105)||(47690604-47690708)
chr4 (1-101)||(18436790-18436889)
chr4 (43-102)||(28693248-28693307)
chr4 (1-101)||(31317258-31317357)
chr4 (1-99)||(43979276-43979374)
chr4 (1-98)||(5814088-5814185)
chr4 (43-103)||(1922492-1922552)
chr4 (44-104)||(40005768-40005828)
chr4 (1-101)||(51892945-51893045)
chr4 (43-102)||(49264228-49264287)
chr4 (53-108)||(53940402-53940457)
chr4 (43-101)||(8444657-8444715)
chr4 (1-103)||(15169286-15169388)
chr4 (1-98)||(32384217-32384314)
chr4 (1-102)||(35377660-35377761)
chr4 (1-102)||(43562006-43562107)
chr4 (1-109)||(13199317-13199425)
chr4 (43-103)||(23206018-23206078)
chr4 (44-100)||(41965142-41965198)
chr4 (45-101)||(51716121-51716177)
chr4 (47-101)||(40147625-40147679)
chr4 (1-98)||(45226320-45226416)
chr4 (47-78)||(40005439-40005470)
chr4 (43-78)||(43980130-43980165)
chr4 (1-83)||(41965452-41965534)
chr4 (1-103)||(42208112-42208214)
chr4 (1-103)||(52096564-52096666)
chr4 (52-101)||(45848384-45848433)
chr4 (51-103)||(29526247-29526299)
chr4 (47-83)||(31317586-31317622)
[»] scaffold0275 (2 HSPs)
scaffold0275 (1-102)||(1265-1366)
scaffold0275 (47-103)||(1566-1622)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-100)||(5510-5609)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-103)||(57387-57489)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-107)||(58441-58547)
[»] scaffold1095 (1 HSPs)
scaffold1095 (43-102)||(22-81)
[»] scaffold0651 (2 HSPs)
scaffold0651 (1-101)||(6341-6440)
scaffold0651 (1-83)||(6048-6129)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-103)||(14438-14540)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-102)||(9849-9950)
[»] scaffold0825 (1 HSPs)
scaffold0825 (1-101)||(1174-1274)
[»] scaffold0045 (1 HSPs)
scaffold0045 (43-103)||(35332-35392)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-98)||(50071-50126)
[»] scaffold0229 (1 HSPs)
scaffold0229 (43-103)||(24392-24452)
[»] scaffold0036 (1 HSPs)
scaffold0036 (44-100)||(16837-16893)
[»] scaffold0385 (1 HSPs)
scaffold0385 (43-98)||(12971-13026)
[»] scaffold0185 (1 HSPs)
scaffold0185 (49-78)||(8086-8115)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 3e-28; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 35923323 - 35923386
Alignment:
Q  124 acatgaaatgtaaaatgagtttggtcattctgtttaaaatcttttatgtaataaaggtttaaac 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35923323 acatgaaatgtaaaatgagtttggtcattctgtttaaaatcttttatgtaataaaggtttaaac 35923386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43857768 - 43857873
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  43857768 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaac 43857867  T
Q  101 ctattt 106  Q
    ||||||    
T  43857868 ctattt 43857873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7050569 - 7050467
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  7050569 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 7050470  T
Q  101 cta 103  Q
    |||    
T  7050469 cta 7050467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27696980 - 27697081
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||| ||||| |||||||  |||||||||||    
T  27696980 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaaatgcaaggactaaagacatatttaaac 27697079  T
Q  101 ct 102  Q
    ||    
T  27697080 ct 27697081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10496003 - 10496103
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||| | |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  10496003 atatttttacaaagtgcagggaacaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 10496102  T
Q  101 c 101  Q
    |    
T  10496103 c 10496103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34181254 - 34181154
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||||||||||||||||||||||| | |||||||   ||||||||||    
T  34181254 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcgaggactaaagaaatatttaaac 34181155  T
Q  101 c 101  Q
    |    
T  34181154 c 34181154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 4528699 - 4528641
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  4528699 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 4528641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 10837524 - 10837583
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||  |||||||||||||    
T  10837524 gtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaagacatatttaaacct 10837583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 32924047 - 32924102
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||  |||||||||    
T  32924047 gtgtagggaccaatgtcaaaatctgatgaaagtgcagggactaaaggcatatttaa 32924102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 42686081 - 42686038
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaa 86  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  42686081 gtgtagggaccaatgtcaaaatctgatgaaagtgcagagactaa 42686038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 17696956 - 17697014
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  17696956 gtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 17697014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10495822 - 10495745
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||||||||| |  ||||||        ||| ||||||||||||||||||||||||||||||||    
T  10495822 atatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgca 10495745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30795091 - 30795192
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||| ||||| |  ||||||        ||||||||  ||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  30795091 atatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtaggggtcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 30795190  T
Q  101 ct 102  Q
    ||    
T  30795191 ct 30795192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 2705218 - 2705162
Alignment:
Q  46 tagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    |||||||||||  ||||||||||||||||||||| |||||||  |||||||||||||    
T  2705218 tagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaacct 2705162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 9855662 - 9855717
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  9855662 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 9855717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 2057079 - 2057137
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||   |||||||||||    
T  2057079 gtgtagggaccaatgccaaaatctgatgaaaatgcaaggactaaaggtatatttaaacc 2057137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 2232977 - 2233035
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| ||||| || |||||||||||| |||||||  ||||||||||||    
T  2232977 gtgtagggaccaatgccaaaagctaatgaaagtgcaaggactaaagacatatttaaacc 2233035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 37405931 - 37405873
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||||  ||||||||||||    
T  37405931 gtgtagggaccaatgccaaaatctgatgaaagtgtaagaactaaaggcatatttaaacc 37405873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17696710 - 17696633
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||| |||| |  ||||||        ||| ||||||||||||||||||||||||||||||||    
T  17696710 atatttttacaaagtgcagtgaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgca 17696633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Complemental strand, 2232786 - 2232755
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  2232786 agggaccaatgtcaaaatctgatgaaagtgca 2232755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 4528975 - 4529006
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  4528975 agggaccaatgtcaaaatctgatgaaagtgca 4529006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 32539146 - 32539187
Alignment:
Q  59 caaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||||||||||| |||||||  |||||||||||    
T  32539146 caaaatctgatgaaagtgcaaggactaaagacatatttaaac 32539187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 41441636 - 41441689
Alignment:
Q  50 gaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    |||||||  |||||||| |||||||||||| |||||||  ||||||||||||||    
T  41441636 gaccaataccaaaatctcatgaaagtgcaaggactaaagacatatttaaaccta 41441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 42216313 - 42216245
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctattttttaa 111  Q
    ||||||| ||||||| |||||| |||| ||||||||| || ||||  ||||||||||||| ||| ||||    
T  42216313 gtgtaggaaccaatgccaaaatatgataaaagtgcaaggattaaagacatatttaaacctttttgttaa 42216245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41320652 - 41320760
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  41320652 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaac 41320751  T
Q  101 ctatttttt 109  Q
    |||||||||    
T  41320752 ctatttttt 41320760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38816542 - 38816646
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  38816542 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatatttaaac 38816641  T
Q  101 ctatt 105  Q
    |||||    
T  38816642 ctatt 38816646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21766608 - 21766506
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  21766608 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 21766509  T
Q  101 cta 103  Q
    |||    
T  21766508 cta 21766506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39997744 - 39997642
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||| ||||| |  ||||||        |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  39997744 atatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtaggggccaatgtcaaaatctgatgaaagtgcaaagactaaagacatatttaaac 39997645  T
Q  101 cta 103  Q
    |||    
T  39997644 cta 39997642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6626266 - 6626166
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  6626266 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 6626167  T
Q  101 c 101  Q
    |    
T  6626166 c 6626166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18732738 - 18732636
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  18732738 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 18732639  T
Q  101 cta 103  Q
    |||    
T  18732638 cta 18732636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 35193674 - 35193732
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  35193674 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 35193732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 2765300 - 2765360
Alignment:
Q  49 ggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    |||||||||||||||| |||||||||||||| |||||||  ||||||||||||||||||||    
T  2765300 ggaccaatgtcaaaatttgatgaaagtgcaaggactaaagacatatttaaacctatttttt 2765360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47404163 - 47404263
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  |||||         ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  47404163 atatttttacaaagtgcagggaccaattccaaaaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatatttaaac 47404262  T
Q  101 c 101  Q
    |    
T  47404263 c 47404263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26174715 - 26174612
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||         |||||||||||||| ||||||||||||||||||||| |||||||  |||||| ||||    
T  26174715 atatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattcaaac 26174616  T
Q  101 ctat 104  Q
    ||||    
T  26174615 ctat 26174612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 6607876 - 6607934
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  6607876 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 6607934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44141509 - 44141407
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||  |||||||  ||||||||| |    
T  44141509 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagc 44141410  T
Q  101 cta 103  Q
    |||    
T  44141409 cta 44141407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8952724 - 8952825
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||| ||||||| |  ||||||        ||||||||||||||| |||||||||||||||||||||  ||||||  |||||||||||    
T  8952724 atatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaagcactaaaggcatatttaaac 8952823  T
Q  101 ct 102  Q
    ||    
T  8952824 ct 8952825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 19277000 - 19277059
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||   ||||||||||||    
T  19277000 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagatatatttaaacct 19277059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 23999976 - 23999921
Alignment:
Q  46 tagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  23999976 taggaaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 23999921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 24164071 - 24164017
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatattta 97  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||    
T  24164071 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 24164017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 31849494 - 31849440
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||| ||||||||||||||||||||  |||||||| |||||||||    
T  31849494 tgtagggaccaatgccaaaatctgatgaaagtgcagggactaaatgcatatttaa 31849440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36508345 - 36508447
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||| ||||  ||||||||||||||||| ||| |||||||  |||||||||||    
T  36508345 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaataccaaaatctgatgaaagtacaaggactaaaggcatatttaaac 36508444  T
Q  101 cta 103  Q
    |||    
T  36508445 cta 36508447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 10336176 - 10336120
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||||||||||||||||||||||||||||||||||| || ||||  ||||||||||||    
T  10336176 tgtagggaccaatgtcaaaatctgatgaaagtgcaagga-taaacacatatttaaacc 10336120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47913221 - 47913141
Alignment:
Q  1 atatttttacaaagtgcagggaccgaca--ccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaa 79  Q
    |||||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||||||||||||||||||    
T  47913221 atatttttacaaagtgcagggaccgaaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaa 47913141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 39103057 - 39103113
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||  ||||||||||    
T  39103057 gtgtagggaccaatgccaaaatctgatgaaagtgctaggactaaaggcatatttaaa 39103113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21276577 - 21276679
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||| |||||||| |||||||||||  |||||||  ||||||||| |    
T  21276577 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatcttatgaaagtgcagggactaaagacatatttaagc 21276676  T
Q  101 cta 103  Q
    |||    
T  21276677 cta 21276679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 21438299 - 21438241
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    |||||||||||||| ||||||||||||||||||||  || ||||  ||||||||||||||    
T  21438299 tgtagggaccaatgccaaaatctgatgaaagtgcaggga-taaagacatatttaaaccta 21438241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 38567556 - 38567498
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| |||||| |||||||| ||| | |||||||  ||||||||||||    
T  38567556 gtgtagggaccaatgccaaaatatgatgaaaatgcgaggactaaaggcatatttaaacc 38567498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 48863341 - 48863287
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||| |||||||||| |||||||||  |||||||  |||||||||    
T  48863341 tgtagggaccaatgccaaaatctgaggaaagtgcagggactaaaggcatatttaa 48863287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 11638339 - 11638371
Alignment:
Q  46 tagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||| ||||||||||||||||||||||||||    
T  11638339 tagggatcaatgtcaaaatctgatgaaagtgca 11638371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 48863504 - 48863536
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaa 79  Q
    ||||||||||| |||||||||||||||||||||    
T  48863504 agggaccaatgccaaaatctgatgaaagtgcaa 48863536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 5e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39412252 - 39412152
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  39412252 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaatacatatttaaac 39412153  T
Q  101 c 101  Q
    |    
T  39412152 c 39412152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11062448 - 11062339
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  11062448 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 11062349  T
Q  101 ctatttttta 110  Q
    || |||||||    
T  11062348 ctttttttta 11062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5214366 - 5214264
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  5214366 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 5214267  T
Q  101 cta 103  Q
    |||    
T  5214266 cta 5214264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38790049 - 38789949
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||    
T  38790049 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaggaatatttaaac 38789950  T
Q  101 c 101  Q
    |    
T  38789949 c 38789949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 4621026 - 4621091
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||| ||||||    
T  4621026 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaagcatatttaaacctttttttt 4621091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 26408950 - 26409047
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||    
T  26408950 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 26409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38245054 - 38245155
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||| ||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  38245054 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 38245153  T
Q  101 ct 102  Q
    ||    
T  38245154 ct 38245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23910613 - 23910713
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||| |||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  23910613 atatttttataaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 23910712  T
Q  101 c 101  Q
    |    
T  23910713 c 23910713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 34929595 - 34929535
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    |||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  34929595 tgtagggatcaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaacctat 34929535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16968772 - 16968713
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||  |||||||||||||    
T  16968772 gtgtagggaccaatgtcaaaatctgataaaagtgtaaagactaaaagcatatttaaacct 16968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 17964962 - 17965064
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||| ||||||||| |||||||  ||||||| |||    
T  17964962 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaaggcatattttaac 17965061  T
Q  101 cta 103  Q
    |||    
T  17965062 cta 17965064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 22619788 - 22619846
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  22619788 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 22619846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23910395 - 23910318
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||||||||||||||||||||||||    
T  23910395 atatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgca 23910318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 2268609 - 2268669
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||  ||||||||||||||    
T  2268609 gtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 2268669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 8343099 - 8343043
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  8343099 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 8343043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18036319 - 18036219
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||| ||||||||||||||||||||| |||||||  ||| |||||||    
T  18036319 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatttttaaac 18036220  T
Q  101 c 101  Q
    |    
T  18036219 c 18036219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 18674205 - 18674261
Alignment:
Q  45 gtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  18674205 gtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 18674261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 8145030 - 8145085
Alignment:
Q  46 tagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  8145030 tagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 8145085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 15440578 - 15440519
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||  ||||||||||| ||||||||| |||||||| |||||||||||||    
T  15440578 gtgtagggaccaataccaaaatctgataaaagtgcaaggactaaatacatatttaaacct 15440519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 30491951 - 30491885
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    |||||||||||||||  |||||||||| ||||||||| |||||||  ||||||||||||| ||||||    
T  30491951 gtgtagggaccaatgcaaaaatctgataaaagtgcaaggactaaagacatatttaaacctttttttt 30491885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 2033795 - 2033738
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  2033795 tgtaggaaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 2033738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4717126 - 4717235
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||| |||||||||||||||| |  ||||||        ||||||||| ||||| ||||||||||||||||||||  |||||||  ||||||||| |    
T  4717126 atattttcacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaagc 4717225  T
Q  101 ctatttttta 110  Q
    || |||||||    
T  4717226 ctttttttta 4717235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25945640 - 25945741
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||| ||||| |  ||||||        || |||||||||||| ||||||||||||||||||||| |||||||  | |||||||||    
T  25945640 atatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtatagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcgtatttaaac 25945739  T
Q  101 ct 102  Q
    ||    
T  25945740 ct 25945741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 20166120 - 20166060
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||| ||||| |||||||||||||||||||||  ||||||  ||||||||||||||    
T  20166120 gtgtagggatcaatgccaaaatctgatgaaagtgcaagaactaaaggcatatttaaaccta 20166060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 3578057 - 3578002
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  3578057 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 3578002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 974182 - 974248
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttta 110  Q
    |||||||||||||  ||||||||||||||||||||  |||||||  ||||||||| |||||| ||||    
T  974182 tgtagggaccaataccaaaatctgatgaaagtgcagggactaaagacatatttaagcctattcttta 974248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18705807 - 18705908
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        || ||  |||||||  |||||| ||||||||||||||||||||||  |||||||||||    
T  18705807 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtataacgaccaataccaaaatttgatgaaagtgcaaagactaaagacatatttaaac 18705906  T
Q  101 ct 102  Q
    ||    
T  18705907 ct 18705908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 5214596 - 5214627
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  5214596 agggaccaatgtcaaaatctgatgaaagtgca 5214627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 23592811 - 23592842
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  23592811 agggaccaatgtcaaaatctgatgaaagtgca 23592842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 13198243 - 13198275
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaa 79  Q
    ||||||||||| |||||||||||||||||||||    
T  13198243 agggaccaatgccaaaatctgatgaaagtgcaa 13198275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 8e-23; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5132526 - 5132420
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  5132526 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 5132427  T
Q  101 ctatttt 107  Q
    |||||||    
T  5132426 ctatttt 5132420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 38872610 - 38872508
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  38872610 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatatttaaac 38872511  T
Q  101 cta 103  Q
    |||    
T  38872510 cta 38872508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28486720 - 28486611
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  28486720 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 28486621  T
Q  101 ctatttttta 110  Q
    |||| |||||    
T  28486620 ctatatttta 28486611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38019278 - 38019376
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  38019278 atatttttacaaagtgcagggaccaatttcaaacaaaaaaatgtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaa 38019376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47648170 - 47648272
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||||| |||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  47648170 atatttttacaaagtacagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 47648269  T
Q  101 cta 103  Q
    |||    
T  47648270 cta 47648272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14291351 - 14291250
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||| | |  ||||||        |||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||    
T  14291351 atatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagggaccaatatcaaaatctaatgaaagtgcaaggactaaatgcatatttaaac 14291252  T
Q  101 ct 102  Q
    ||    
T  14291251 ct 14291250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23253639 - 23253740
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||         |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  23253639 atatttttacaaagtgcagggaccaattccaaacaaaaaaaattgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 23253738  T
Q  101 ct 102  Q
    ||    
T  23253739 ct 23253740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 50755973 - 50756078
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||         |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  50755973 atatttttacaaagtgcagggaccaattccaaacaaaaaaaattgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 50756072  T
Q  101 ctattt 106  Q
    | ||||    
T  50756073 caattt 50756078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1342746 - 1342846
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||||||||||||||| || |||||||  |||||||||||    
T  1342746 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaac 1342845  T
Q  101 c 101  Q
    |    
T  1342846 c 1342846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 1366360 - 1366300
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||    
T  1366360 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 1366300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2937091 - 2937191
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  2937091 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 2937189  T
Q  101 ct 102  Q
    ||    
T  2937190 ct 2937191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6782666 - 6782566
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||| | |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  6782666 atatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 6782567  T
Q  101 c 101  Q
    |    
T  6782566 c 6782566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 17077684 - 17077740
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  17077684 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 17077740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 44396397 - 44396457
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||    
T  44396397 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccta 44396457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45951218 - 45951318
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||| ||||||| |||||||||||||||||||||||||||||  | |||||||||    
T  45951218 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtaggaaccaatgccaaaatctgatgaaagtgcaaagactaaaggcgtatttaaac 45951317  T
Q  101 c 101  Q
    |    
T  45951318 c 45951318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 5905088 - 5905147
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  5905088 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatatttaaacct 5905147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 25378742 - 25378687
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  25378742 agggaccaatgccaaaatctgatgaaagtgcaaagactaaagacatatttaaacct 25378687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47672257 - 47672356
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||  ||||||||||||||||||||| |||||||  |||||||||||    
T  47672257 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 47672356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28838201 - 28838099
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||| ||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||   ||||||||||    
T  28838201 atatttttacaaagtgcaggaaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagagatatttaaac 28838102  T
Q  101 cta 103  Q
    |||    
T  28838101 cta 28838099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 29548636 - 29548571
Alignment:
Q  46 tagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctattttttaa 111  Q
    |||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||  ||||||||    
T  29548636 tagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccatttttttaa 29548571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 30057287 - 30057344
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    ||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||    
T  30057287 agggaccaatgccaaaatctgatgaaagtgcaatgactaaaggcatatttaaacctat 30057344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32487175 - 32487276
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||| |||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||||    
T  32487175 atatttttacaaattgcagggaccaattccaaacaaaaataagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaaac 32487274  T
Q  101 ct 102  Q
    ||    
T  32487275 ct 32487276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37351040 - 37350939
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||         |||||||||||||| ||||||||||||||||||||| || ||||  |||||||||||    
T  37351040 atatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaaggcatatttaaac 37350941  T
Q  101 ct 102  Q
    ||    
T  37350940 ct 37350939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 2731063 - 2731122
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||  |||||||||||||    
T  2731063 gtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaacct 2731122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 36466292 - 36466347
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  36466292 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 36466347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 39950290 - 39950231
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||  |||||||||||||    
T  39950290 gtgtagggaccaataccaaaatctgatgaaagtgtaaagactaaagacatatttaaacct 39950231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40125138 - 40125197
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||||||    
T  40125138 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaaacct 40125197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 44519694 - 44519756
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatt 105  Q
    ||||||||||||||  ||||||||||||||||||||| || ||||  ||||||||||||||||    
T  44519694 gtgtagggaccaataccaaaatctgatgaaagtgcaaggattaaagacatatttaaacctatt 44519756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5132644 - 5132721
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||||||||| |  ||||||        ||| ||||||||||||||||||||||||||||||||    
T  5132644 atatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgca 5132721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 38717384 - 38717319
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctattttt 108  Q
    |||||||||||||||  |||||||||||||||| ||| |||||||  |||||||||||||| ||||    
T  38717384 gtgtagggaccaatgctaaaatctgatgaaagtacaaggactaaaggcatatttaaacctagtttt 38717319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 49628447 - 49628507
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||   |||||||||||||    
T  49628447 gtgtagggaccaatgccaaaatctaatgaaagtgcaaggactaaagagatatttaaaccta 49628507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 4487039 - 4487091
Alignment:
Q  46 tagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    ||||||||||||| |||||||||||||||||||| || ||||  |||||||||    
T  4487039 tagggaccaatgtaaaaatctgatgaaagtgcaaggagtaaagacatatttaa 4487091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 14556326 - 14556434
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||| | |  ||||||        |||||||||| |||| ||||||||||||||||||||  |||||||   |||||||| |    
T  14556326 atatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagggacaaatgccaaaatctgatgaaagtgcagggactaaagatatatttaagc 14556425  T
Q  101 ctatttttt 109  Q
    |||| ||||    
T  14556426 ctatatttt 14556434  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 30056985 - 30056945
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagac 83  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  30056985 gtgtagggaccaatgccaaaatctgatgaaagtgcagagac 30056945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 38872868 - 38872899
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  38872868 agggaccaatgtcaaaatctgatgaaagtgca 38872899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 36302784 - 36302838
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||| ||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  36302784 tgtaggaaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaa 36302838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 29715741 - 29715798
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||| ||| |||||||||||||||||||||||||  |||||||  |||| ||||||    
T  29715741 gtgtagagactaatgtcaaaatctgatgaaagtgcagggactaaaggcatagttaaac 29715798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 29721441 - 29721506
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctattttt 108  Q
    ||||||| ||||||| ||||||||||||||||||||  ||||| |  ||||||||| ||| |||||    
T  29721441 gtgtaggaaccaatgccaaaatctgatgaaagtgcagggactagagacatatttaagccttttttt 29721506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 6782920 - 6782976
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||| ||||||||||||||||||||| ||| ||   || |||||||||||    
T  6782920 agggaccaatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaaccta 6782976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 3e-22; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16408838 - 16408737
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  16408838 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgcaaagactaaatgcatatttaaac 16408739  T
Q  101 ct 102  Q
    ||    
T  16408738 ct 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 9566399 - 9566465
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||||||    
T  9566399 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaacctttttttt 9566465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33360763 - 33360864
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||| ||||||| |  ||||||        ||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  33360763 atatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaacgactaaagacatatttaaac 33360862  T
Q  101 ct 102  Q
    ||    
T  33360863 ct 33360864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 14630871 - 14630809
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatt 105  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||    
T  14630871 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacctatt 14630809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 32218900 - 32218842
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  32218900 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaacc 32218842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10143526 - 10143627
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||||||||||||||| || |||||||  |||||||||||    
T  10143526 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgacaaaatctgatgaaagtgtaaggactaaaagcatatttaaac 10143625  T
Q  101 ct 102  Q
    ||    
T  10143626 ct 10143627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33705901 - 33705801
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||| | |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  33705901 atatttttacaaagtgcagggaacaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 33705802  T
Q  101 c 101  Q
    |    
T  33705801 c 33705801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 21002826 - 21002768
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  21002826 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 21002768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6390226 - 6390323
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  6390226 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 6390323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22695899 - 22696000
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        |||||| |||||||| |||||||| |||||||||||| |||||||  |||||||||||    
T  22695899 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagagaccaatgccaaaatctaatgaaagtgcaaggactaaaggcatatttaaac 22695998  T
Q  101 ct 102  Q
    ||    
T  22695999 ct 22696000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 6535464 - 6535408
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  6535464 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 6535408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 12396019 - 12396079
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||  ||||||||||||||    
T  12396019 gtgtagggaccaatgccaaaatctgattaaagtgcaaggactaaagacatatttaaaccta 12396079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 33243527 - 33243587
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  ||||||||| |||||    
T  33243527 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaccctat 33243587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 605797 - 605856
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  605797 gtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacct 605856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 5146876 - 5146817
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||  |||||||||||||    
T  5146876 gtgtagggaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaaacct 5146817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 33877847 - 33877788
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| |||||||||||||||||| || |||||||  |||||||||||||    
T  33877847 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaaggcatatttaaacct 33877788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32219159 - 32219237
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaa 79  Q
    |||||||||||||||||||||||| | |||||||        ||| ||||||||||| |||||||||||||||||||||    
T  32219159 atatttttacaaagtgcagggaccaataccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcaa 32219237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 5997548 - 5997609
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||  ||||||||| |||||    
T  5997548 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaagcctat 5997609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16409054 - 16409131
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||||||||| |  ||||||        ||| ||||||||||||||||||||||||||||||||    
T  16409054 atatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgca 16409131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 583714 - 583662
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    ||||||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  583714 agggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 583662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2793345 - 2793422
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||| ||||||| |  ||||||        |||||||||||||||| |||||||||||||||||||    
T  2793345 atatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgttaaaatctgatgaaagtgca 2793422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 3199548 - 3199605
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||||||||||||| ||||||||||| |||||| || |||||||  ||||||||||||    
T  3199548 tgtagggaccaatgccaaaatctgataaaagtgtaaggactaaagacatatttaaacc 3199605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 21904922 - 21904865
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||  ||||||||||||    
T  21904922 tgtagggactaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 21904865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22695655 - 22695578
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||| ||||| |  ||||||        ||| ||||||||||||||||||||||||||||||||    
T  22695655 atatttttacaaagtgcaaggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgca 22695578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 3199365 - 3199330
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||| ||||||||||||||||||||    
T  3199365 gtgtagggaccaatgccaaaatctgatgaaagtgca 3199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 1827110 - 1827074
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagac 83  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  1827110 agggaccaatgccaaaatctgatgaaagtgcagagac 1827074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 3e-22; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44398025 - 44397924
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  44398025 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaac 44397926  T
Q  101 ct 102  Q
    ||    
T  44397925 ct 44397924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11692255 - 11692148
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        |||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  11692255 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagagaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 11692156  T
Q  101 ctattttt 108  Q
    || |||||    
T  11692155 cttttttt 11692148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 29015776 - 29015709
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttta 110  Q
    |||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||| ||||||||    
T  29015776 gtgtagggaccaatgtcaaaatctaatgaaagtgcaaggactaaagacatatttaaaccaatttttta 29015709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47358469 - 47358568
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  47358469 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 47358568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21441068 - 21440963
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||| ||||| ||||||||||||||||||||| || ||||  |||||||||||    
T  21441068 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaac 21440969  T
Q  101 ctattt 106  Q
    ||||||    
T  21440968 ctattt 21440963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38443598 - 38443703
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||    
T  38443598 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaataccaaaatctgatgaaagtgcaatgactaaatgcatatttaaac 38443696  T
Q  101 ctatttt 107  Q
    || ||||    
T  38443697 ctttttt 38443703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 21561155 - 21561214
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  21561155 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacct 21561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23461041 - 23460942
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||| ||||||||| |||||||  |||||||||||    
T  23461041 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaaggcatatttaaac 23460942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 55328498 - 55328439
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||||    
T  55328498 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaaggcatatttaaaccta 55328439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 27957817 - 27957875
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  27957817 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacct 27957875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35565384 - 35565486
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||| ||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  35565384 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 35565483  T
Q  101 cta 103  Q
    |||    
T  35565484 cta 35565486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 40790866 - 40790808
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  40790866 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacct 40790808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 47982683 - 47982749
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||  ||||||||||||||| ||||    
T  47982683 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacctatatttt 47982749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 47991970 - 47992036
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||  ||||||||||||||| ||||    
T  47991970 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacctatatttt 47992036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 48001257 - 48001323
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||  ||||||||||||||| ||||    
T  48001257 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacctatatttt 48001323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 48010544 - 48010610
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||  ||||||||||||||| ||||    
T  48010544 gtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacctatatttt 48010610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 49665651 - 49665717
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||  |||||||||||||| |||||    
T  49665651 gtgtaggggccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacctacttttt 49665717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29352635 - 29352736
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||||||||| |||| |  ||||||        ||||||||| ||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  29352635 atatttttacaaagtgcagagaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 29352734  T
Q  101 ct 102  Q
    ||    
T  29352735 ct 29352736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31705303 - 31705206
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||| ||| ||||||||||||||||||||||||||| |||||||  |||||||||    
T  31705303 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtatggatcaatgtcaaaatctgatgaaagtgcaaggactaaaggcatatttaa 31705206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44638513 - 44638412
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||| ||||| |  ||||||        ||||||||||||||| ||||||||||| ||||||||| |||||||  |||||||||||    
T  44638513 atatttttacaaagtgcatggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaaggcatatttaaac 44638414  T
Q  101 ct 102  Q
    ||    
T  44638413 ct 44638412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 16731976 - 16731921
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  16731976 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 16731921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 33092092 - 33092033
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||  |||||||||||||    
T  33092092 gtgtagggaccaatgccaaaaactgatgaaagtgcaaggactaaagacatatttaaacct 33092033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40036746 - 40036644
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||| |||||||||||||| |  ||||||        |||||||||||||| ||||||||| |||||||||||| |||||||  ||||||||| |    
T  40036746 atatttttataaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatatcaaaatctaatgaaagtgcaaggactaaagacatatttaagc 40036647  T
Q  101 cta 103  Q
    |||    
T  40036646 cta 40036644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3017352 - 3017251
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgat-gaaagtgcaaagactaaattcatatttaaa 99  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||| ||||||||||| |||||||||| |||||||  ||||||||||    
T  3017352 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatcgaaagtgcaaggactaaagacatatttaaa 3017253  T
Q  100 cc 101  Q
    ||    
T  3017252 cc 3017251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 51753995 - 51753894
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||||||||||| || |  ||||||        ||||||||||||||  ||||||||||||||||||||| |||||||  |||||| ||||    
T  51753995 atatttttacaaagtgcaggggccaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatattaaaac 51753896  T
Q  101 ct 102  Q
    ||    
T  51753895 ct 51753894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 54090168 - 54090225
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    ||||||||||| |||||||| |||||||||||| |||||||  |||||||||||||||    
T  54090168 agggaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaaacctat 54090225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 19987892 - 19987838
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  19987892 tgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 19987838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 52836910 - 52836968
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    |||||| ||||||||||||||||||| |||||| || |||||||  |||||||||||||    
T  52836910 tgtaggaaccaatgtcaaaatctgataaaagtgtaaggactaaaggcatatttaaacct 52836968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16222574 - 16222478
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||| |||||||||||||  |||||||  |||||||||    
T  16222574 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaa 16222478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 29352458 - 29352399
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctattt 106  Q
    ||||||||||| |||||||||||||||||||| |||| ||   || ||||||||||||||    
T  29352458 agggaccaatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaacctattt 29352399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40393737 - 40393796
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    |||| |||||||||| ||||||||||| ||||||| | |||||||  |||||||||||||    
T  40393737 gtgttgggaccaatgccaaaatctgataaaagtgcgaggactaaagacatatttaaacct 40393796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 44638620 - 44638654
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||| ||||||||||||||||||||    
T  44638620 tgtagggaccaatgccaaaatctgatgaaagtgca 44638654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 34682637 - 34682694
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||||||| ||||| ||||||||||| ||| ||||| |||||||  ||||||||||||    
T  34682637 tgtagggatcaatgccaaaatctgataaaaatgcaaggactaaagacatatttaaacc 34682694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Original strand, 55328800 - 55328828
Alignment:
Q  50 gaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||||||||||||||    
T  55328800 gaccaatgtcaaaatctgatgaaagtgca 55328828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 5e-21; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 970751 - 970858
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  970751 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaac 970850  T
Q  101 ctattttt 108  Q
    || |||||    
T  970851 cttttttt 970858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 25263704 - 25263770
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  25263704 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaagcatatttaaacctatttttt 25263770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33850767 - 33850869
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        |||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  33850767 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtaggggccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaac 33850866  T
Q  101 cta 103  Q
    |||    
T  33850867 cta 33850869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32928027 - 32928128
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  32928027 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 32928126  T
Q  101 ct 102  Q
    ||    
T  32928127 ct 32928128  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 42813933 - 42813873
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  42813933 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaaacatatttaaaccta 42813873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 8031129 - 8031067
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatt 105  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  8031129 gtgtatggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaacctatt 8031067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9777285 - 9777383
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  9777285 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaa 9777383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40691496 - 40691394
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||         |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  40691496 atatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 40691397  T
Q  101 cta 103  Q
    |||    
T  40691396 cta 40691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 32504037 - 32503973
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttt 107  Q
    ||||||||||||||| |||||||||||||||||| || |||||||  ||||||||||||||||||    
T  32504037 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaacctatttt 32503973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2098392 - 2098290
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||| ||||| | |||||||        ||||||||||||||||||||||||||||||| || || ||||||   |||||||||||    
T  2098392 atatttttacaaagtgcatggaccaataccaaacaaaagaaagtgtagggaccaatgtcaaaatctgatgaaaatgtaaggactaatgacatatttaaac 2098293  T
Q  101 cta 103  Q
    |||    
T  2098292 cta 2098290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 430631 - 430574
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  430631 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 430574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3952227 - 3952326
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||| ||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  3952227 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 3952326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 18707878 - 18707937
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  18707878 gtgtagagaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacct 18707937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32653914 - 32653836
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaa 79  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||||||||||||||||||    
T  32653914 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaa 32653836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 34825740 - 34825674
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctatttttt 109  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||  ||||||||| |||| |||||    
T  34825740 gtgtagggaccaatgccaaaatatgatgaaagtgcagagactaaagacatatttaagcctaattttt 34825674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18478476 - 18478379
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        |||||||||| |||||||||||||||||||| ||||  |||||||  |||||||||    
T  18478476 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggactaatgtcaaaatctgatgaaaatgcagggactaaaggcatatttaa 18478379  T

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Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18907024 - 18906927
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||| ||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  18907024 atatttttacaaagtgtagggaccaattccaaacaaaataaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 18906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14102672 - 14102572
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||| ||||| | | |||||||  |||||||||||    
T  14102672 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagttcgaggactaaagacatatttaaac 14102573  T
Q  101 c 101  Q
    |    
T  14102572 c 14102572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 14827556 - 14827497
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    |||||||||| |||  ||||||||||||||||||||| |||||||  |||||||||||||    
T  14827556 gtgtagggacaaataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacct 14827497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 42435004 - 42435047
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaa 86  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  42435004 gtgtagggaccaatgccaaaatctgatgaaagtgcagagactaa 42435047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 4831171 - 4831113
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||  ||| ||||||||    
T  4831171 gtgtagggaccaatatcaaaacctgatgaaagtgcaaggactaaagacatgtttaaacc 4831113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 5674306 - 5674416
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||||||||||| || |  ||||||        |||||||||||||||  |||||||||| |||||||||  ||||||  |||||||||||    
T  5674306 atatttttacaaagtgcaggggccaattccaaacaaaaaaaagtgtagggaccaatgctaaaatctgataaaagtgcaagaactaaagacatatttaaac 5674405  T
Q  101 ctattttttaa 111  Q
     || |||||||    
T  5674406 ttaatttttaa 5674416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11108720 - 11108806
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaa 87  Q
    |||||||||||||||||||||||| |  | ||||        ||||||||||||||| ||||||||||||||||||||  |||||||    
T  11108720 atatttttacaaagtgcagggaccaattctaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaa 11108806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41186349 - 41186247
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        |||||| |||||||| ||||||||||||||||||||  ||| |||  |||||||||||    
T  41186349 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagagaccaatgccaaaatctgatgaaagtgcatggaccaaagacatatttaaac 41186250  T
Q  101 cta 103  Q
    |||    
T  41186249 cta 41186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 19591669 - 19591742
Alignment:
Q  2 tatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagt 75  Q
    ||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||||||||||||||    
T  19591669 tatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgacaaaatctgatgaaagt 19591742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4950120 - 4950044
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||||||||| |  ||||||        ||| ||||||||||||||||||||||||||||||||    
T  4950120 atatttttacaaagtgcagggaccaatgccaaacaaaaaaa-gtgcagggaccaatgtcaaaatctgatgaaagtgca 4950044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 11278050 - 11277994
Alignment:
Q  46 tagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||| ||||  |||||||||||||||||||| |||||||  |||||||||||||    
T  11278050 tagggactaatgctaaaatctgatgaaagtgcaaggactaaaaacatatttaaacct 11277994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 16265726 - 16265786
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    |||| ||| |||| |||||||||||||||||| ||| |||||||  |||||||||||||||    
T  16265726 tgtaaggatcaatatcaaaatctgatgaaagtacaaggactaaagacatatttaaacctat 16265786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 45003097 - 45003153
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    ||||| ||||||||| |||||| |||||||||||||| |||||||  ||||||||||    
T  45003097 gtgtatggaccaatgccaaaatttgatgaaagtgcaaggactaaacgcatatttaaa 45003153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 5674053 - 5674018
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5674053 gtgtagggaccaatgtcaaaatctgataaaagtgca 5674018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Complemental strand, 16265639 - 16265608
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  16265639 agggaccaatgtcaaaatctgatgaaagtgca 16265608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 28625826 - 28625857
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  28625826 agggaccaatgtcaaaatctgatgaaagtgca 28625857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 41186605 - 41186636
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  41186605 agggaccaatgtcaaaatctgatgaaagtgca 41186636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8031332 - 8031410
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaa 79  Q
    ||||||||||||||| |||||||| |  ||||||        ||| ||||||||||||||||||||||||||| |||||    
T  8031332 atatttttacaaagtacagggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaaatgcaa 8031410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14827809 - 14827911
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||||||||||||||||||||||||   |||||         || ||||||||||| ||||||||||||||||||||| ||| ||   || ||||||||    
T  14827809 atatttttacaaagtgcagggaccgatgtcaaacaaaaaaaactgcagggaccaatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaac 14827908  T
Q  101 cta 103  Q
    |||    
T  14827909 cta 14827911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 7900318 - 7900257
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    |||||||||||||||  |||||||||||||||||||  |||||||   |||||||| |||||    
T  7900318 gtgtagggaccaatgctaaaatctgatgaaagtgcagggactaaagatatatttaagcctat 7900257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 3951999 - 3951971
Alignment:
Q  50 gaccaatgtcaaaatctgatgaaagtgca 78  Q
    |||||||||||||||||||||||||||||    
T  3951999 gaccaatgtcaaaatctgatgaaagtgca 3951971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 3963379 - 3963435
Alignment:
Q  43 gtgtagggaccaa-tgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    ||||||||||||| || ||||||||||||||||||||  |||||||  |||||||||    
T  3963379 gtgtagggaccaaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 3963435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1614041 - 1613939
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  1614041 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 1613942  T
Q  101 cta 103  Q
    |||    
T  1613941 cta 1613939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 321748 - 321641
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| || |||||         ||||||||||||||| |||||||||||||||||| || |||||||  ||||||||||     
T  321748 atatttttacaaagtgcagggaccaactccaaataaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaaaacatatttaaat 321649  T
Q  101 ctattttt 108  Q
    ||||||||    
T  321648 ctattttt 321641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 46008647 - 46008544
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||| ||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  46008647 atatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 46008548  T
Q  101 ctat 104  Q
    ||||    
T  46008547 ctat 46008544  T

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Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16335371 - 16335473
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||| ||||||||||| || |||||||| |||||||||||    
T  16335371 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgtaaggactaaatacatatttaaac 16335470  T
Q  101 cta 103  Q
    |||    
T  16335471 cta 16335473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32328347 - 32328449
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  32328347 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 32328446  T
Q  101 cta 103  Q
    |||    
T  32328447 cta 32328449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 42496030 - 42495933
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||||||||||||||||||||||||  |||||||  |||||||||    
T  42496030 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcagggactaaagacatatttaa 42495933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45311548 - 45311657
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||         |||| ||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  45311548 atatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtaaggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 45311647  T
Q  101 ctatttttta 110  Q
    | ||||||||    
T  45311648 caatttttta 45311657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 42598968 - 42598908
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||    
T  42598968 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 42598908  T

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Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 47690604 - 47690708
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||| ||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||||    
T  47690604 atatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaaac 47690703  T
Q  101 ctatt 105  Q
    |||||    
T  47690704 ctatt 47690708  T

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Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18436889 - 18436790
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  18436889 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 18436791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 28693248 - 28693307
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  28693248 gtgtagggaccaatgacaaaatctgatgaaagtgcaaggactaaagacatatttaaacct 28693307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31317357 - 31317258
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  31317357 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 31317259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43979374 - 43979276
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaa 99  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| || ||||  ||||||||||    
T  43979374 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaa 43979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5814088 - 5814185
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  5814088 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 5814185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 1922552 - 1922492
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||||||    
T  1922552 gtgtaggaaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccta 1922492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 40005768 - 40005828
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctat 104  Q
    |||||||||||||| ||||||||||||||||||||| |||||||   ||||||||||||||    
T  40005768 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggtatatttaaacctat 40005828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51892945 - 51893045
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||| ||||||| |  ||||||        ||||||||| ||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  51892945 atatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 51893044  T
Q  101 c 101  Q
    |    
T  51893045 c 51893045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 49264228 - 49264287
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||  |||||||||||||    
T  49264228 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggacgaaagacatatttaaacct 49264287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 53940457 - 53940402
Alignment:
Q  53 caatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacctattttt 108  Q
    ||||||||||||||||| ||||||||| |||||||  |||||||||||||||||||    
T  53940457 caatgtcaaaatctgataaaagtgcaaggactaaagacatatttaaacctattttt 53940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 8444715 - 8444657
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||||| |||||||||||||||||| || |||||||  ||||||||||||    
T  8444715 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaacc 8444657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15169286 - 15169388
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||         |||||||||||| | ||||||||||||||||||| | |||||||  |||||||||||    
T  15169286 atatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaacgccaaaatctgatgaaagtgccaggactaaagacatatttaaac 15169385  T
Q  101 cta 103  Q
    |||    
T  15169386 cta 15169388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 32384217 - 32384314
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||| ||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  32384217 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 32384314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35377761 - 35377660
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||| ||||| |  ||||||        ||||||||||||||  ||||||||||| ||||||||| |||||||  |||||||||||    
T  35377761 atatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgataaaagtgcaaggactaaacgcatatttaaac 35377662  T
Q  101 ct 102  Q
    ||    
T  35377661 ct 35377660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43562006 - 43562107
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||| ||||||| |  ||||||        ||||||||||||||| ||||||||||||||| ||||  |||||||  |||||||||||    
T  43562006 atatttttacaaagtgaagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaaatgcagggactaaaggcatatttaaac 43562105  T
Q  101 ct 102  Q
    ||    
T  43562106 ct 43562107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13199317 - 13199425
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||| | |  ||||||        ||||||||||||||| ||||||||||||||||||||| || ||||   ||||||||||    
T  13199317 atatttttacaaagtgcagggatcaattccaaacaaaaataagtgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaaggtatatttaaac 13199416  T
Q  101 ctatttttt 109  Q
     | ||||||    
T  13199417 ttttttttt 13199425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 23206018 - 23206078
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    |||||||||| |||| |||||||||||||||||| || |||||||  ||||||||||||||    
T  23206018 gtgtagggactaatgccaaaatctgatgaaagtgaaaggactaaagacatatttaaaccta 23206078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 41965198 - 41965142
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||| ||||||||||||||||||||| || ||||  |||||||||||    
T  41965198 tgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaac 41965142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 51716177 - 51716121
Alignment:
Q  45 gtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||||| |||||| |||||||||||||| |||||||  ||||||||||||    
T  51716177 gtagggaccaatgccaaaatttgatgaaagtgcaaggactaaagacatatttaaacc 51716121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 40147625 - 40147679
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    ||||||||||| ||||||||||||||||||||| | |||||  ||||||||||||    
T  40147625 agggaccaatgccaaaatctgatgaaagtgcaaggtctaaagacatatttaaacc 40147679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 45226320 - 45226416
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||| |||||||||||||  |||||||  |||||||||    
T  45226320 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaa 45226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 78
Target Start/End: Complemental strand, 40005470 - 40005439
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||||    
T  40005470 agggaccaatgtcaaaatctgatgaaagtgca 40005439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 43980130 - 43980165
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||| ||||||||||||||||||||    
T  43980130 gtgtagggaccaatgccaaaatctgatgaaagtgca 43980165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41965452 - 41965534
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagac 83  Q
    |||||||||||||||||||||||| |  ||||||        ||  ||||||||||| |||||||||||||||||||| ||||    
T  41965452 atatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtacagggaccaatgccaaaatctgatgaaagtgcagagac 41965534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42208112 - 42208214
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||| | |  ||||||        |||||| |||||||| ||||||||||||||||||||  || ||||  ||||||||| |    
T  42208112 atatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagagaccaatgccaaaatctgatgaaagtgcagggattaaaggcatatttaagc 42208211  T
Q  101 cta 103  Q
    |||    
T  42208212 cta 42208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 52096666 - 52096564
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||| ||||||| |  ||||||        ||||| ||||||||| ||||||||||||||| ||||  |||||||  ||||||||| |    
T  52096666 atatttttacaaagtgtagggaccaattccaaacaaaataaagtgtatggaccaatgccaaaatctgatgaaaatgcagggactaaagacatatttaagc 52096567  T
Q  101 cta 103  Q
    |||    
T  52096566 cta 52096564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 45848433 - 45848384
Alignment:
Q  52 ccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacc 101  Q
    |||||| |||||||||||||||||||||  ||||||  ||||||||||||    
T  45848433 ccaatgccaaaatctgatgaaagtgcaagaactaaaaccatatttaaacc 45848384  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 29526299 - 29526247
Alignment:
Q  51 accaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||| ||||||||||||||||||||| ||| |||  || |||||||||||    
T  29526299 accaatgccaaaatctgatgaaagtgcaaggaccaaagacacatttaaaccta 29526247  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 31317586 - 31317622
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagac 83  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  31317586 agggaccaatgccaaaatctgatgaaagtgcagagac 31317622  T

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Target: scaffold0275 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1366 - 1265
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  1366 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 1267  T
Q  101 ct 102  Q
    ||    
T  1266 ct 1265  T

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Target: scaffold0275; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 1566 - 1622
Alignment:
Q  47 agggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||| ||||| ||||||||||||||||||||| ||| || | || |||||||||||    
T  1566 agggatcaatgccaaaatctgatgaaagtgcaaggaccaattacacatttaaaccta 1622  T

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Target: scaffold0170 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5609 - 5510
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  5609 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 5510  T

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Target: scaffold0079 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 57489 - 57387
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||| ||||||||||| || |||||||| |||||||||||    
T  57489 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgtaaggactaaatacatatttaaac 57390  T
Q  101 cta 103  Q
    |||    
T  57389 cta 57387  T

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Target: scaffold0009 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 58547 - 58441
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||| |||||||||||||||| |||||||||||||| |||||||  |||||||||||    
T  58547 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtaaggaccaatgtcaaaatttgatgaaagtgcaaggactaaagacatatttaaac 58448  T
Q  101 ctatttt 107  Q
    | |||||    
T  58447 ccatttt 58441  T

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Target: scaffold1095 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 22 - 81
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaacct 102  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  22 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacct 81  T

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Target: scaffold0651 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6341 - 6440
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  6341 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 6439  T

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Target: scaffold0651; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6129 - 6048
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagac 83  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| |||||||||||||||||||| ||||    
T  6129 atatttttacaaagtgcagggaccaattccaaacaaaaaaa-gtgtagggaccaatgccaaaatctgatgaaagtgcagagac 6048  T

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Target: scaffold0302 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14438 - 14540
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||||||||  ||||||||||||||||||||| |||||||  |||||||||||    
T  14438 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 14537  T
Q  101 cta 103  Q
    |||    
T  14538 cta 14540  T

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Target: scaffold0044 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9849 - 9950
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |  ||||||        ||||||||||||||| ||||||||||| ||||||||| || ||||  |||||||||||    
T  9849 atatttttacaaagtgcagggaccaattccaaacaaaaaatggtgtagggaccaatgccaaaatctgataaaagtgcaaggattaaaggcatatttaaac 9948  T
Q  101 ct 102  Q
    ||    
T  9949 ct 9950  T

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Target: scaffold0825 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1274 - 1174
Alignment:
Q  1 atatttttacaaagtgcagggaccgacaccaaacnnnnnnnngtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    |||||||||||||||||||||||| |   |||||        ||||||||| ||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  1274 atatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 1175  T
Q  101 c 101  Q
    |    
T  1174 c 1174  T

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Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 35392 - 35332
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    |||||| |||||||| ||||||||||||||||||||| || ||||  ||||||||||||||    
T  35392 gtgtagtgaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaaccta 35332  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 50071 - 50126
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||  |||||||||    
T  50071 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 50126  T

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Target: scaffold0229 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 24392 - 24452
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaaccta 103  Q
    ||||||||||||||| | |||| |||||||||||| | |||||||  ||||||||||||||    
T  24392 gtgtagggaccaatgcccaaatttgatgaaagtgccaggactaaaggcatatttaaaccta 24452  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 16893 - 16837
Alignment:
Q  44 tgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaaac 100  Q
    ||||| |||||||||||||||||||| |||||| || |||||||  |||||||||||    
T  16893 tgtagagaccaatgtcaaaatctgataaaagtgtaaggactaaagacatatttaaac 16837  T

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Target: scaffold0385 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 13026 - 12971
Alignment:
Q  43 gtgtagggaccaatgtcaaaatctgatgaaagtgcaaagactaaattcatatttaa 98  Q
    ||||||||||||||| |||||| |||||||||||||  |||||||  |||||||||    
T  13026 gtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaa 12971  T

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Target: scaffold0185 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 8115 - 8086
Alignment:
Q  49 ggaccaatgtcaaaatctgatgaaagtgca 78  Q
    ||||||||||||||||||||||||||||||    
T  8115 ggaccaatgtcaaaatctgatgaaagtgca 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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