View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18452_low_19 (Length: 261)

Name: NF18452_low_19
Description: NF18452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18452_low_19
NF18452_low_19
[»] chr8 (60 HSPs)
chr8 (122-240)||(32418482-32418599)
chr8 (124-240)||(15719738-15719853)
chr8 (124-240)||(18549286-18549401)
chr8 (139-240)||(14488811-14488912)
chr8 (121-239)||(21125825-21125942)
chr8 (122-240)||(29487914-29488031)
chr8 (122-240)||(33526133-33526250)
chr8 (124-245)||(43727228-43727348)
chr8 (122-234)||(7578340-7578451)
chr8 (122-240)||(4016983-4017100)
chr8 (171-240)||(10755334-10755403)
chr8 (122-240)||(43477316-43477433)
chr8 (124-240)||(30337004-30337119)
chr8 (122-240)||(1162990-1163109)
chr8 (117-240)||(14238825-14238946)
chr8 (122-240)||(1525890-1526007)
chr8 (122-240)||(33636403-33636520)
chr8 (122-240)||(38930382-38930499)
chr8 (139-240)||(24187663-24187764)
chr8 (122-240)||(6146751-6146868)
chr8 (122-240)||(8094560-8094677)
chr8 (122-240)||(10776301-10776418)
chr8 (171-240)||(14496941-14497010)
chr8 (122-240)||(28398842-28398959)
chr8 (122-240)||(32040176-32040293)
chr8 (139-240)||(14495203-14495304)
chr8 (124-240)||(22917730-22917845)
chr8 (117-240)||(40844339-40844462)
chr8 (117-240)||(40066569-40066691)
chr8 (122-240)||(16643846-16643963)
chr8 (122-240)||(19494199-19494316)
chr8 (122-240)||(27341393-27341510)
chr8 (140-240)||(25131206-25131306)
chr8 (122-240)||(1408157-1408274)
chr8 (171-240)||(7272549-7272618)
chr8 (122-240)||(22650547-22650664)
chr8 (171-239)||(16789177-16789245)
chr8 (122-231)||(21509775-21509883)
chr8 (139-240)||(24954814-24954915)
chr8 (127-240)||(19963082-19963198)
chr8 (122-220)||(4375770-4375867)
chr8 (122-240)||(6146595-6146712)
chr8 (171-240)||(35143649-35143718)
chr8 (198-240)||(1686480-1686522)
chr8 (122-240)||(29158435-29158552)
chr8 (200-240)||(3068943-3068983)
chr8 (200-240)||(3305785-3305825)
chr8 (122-215)||(32195360-32195452)
chr8 (171-215)||(23360500-23360544)
chr8 (206-240)||(37536148-37536182)
chr8 (122-205)||(40493033-40493115)
chr8 (207-240)||(4710124-4710157)
chr8 (208-240)||(2728296-2728328)
chr8 (208-240)||(9496405-9496437)
chr8 (171-211)||(10873112-10873152)
chr8 (208-240)||(13796500-13796532)
chr8 (208-240)||(28346458-28346490)
chr8 (208-240)||(32725971-32726003)
chr8 (208-240)||(35097392-35097424)
chr8 (208-240)||(35346902-35346934)
[»] chr5 (58 HSPs)
chr5 (122-240)||(3850627-3850744)
chr5 (122-240)||(34125386-34125502)
chr5 (122-240)||(3850430-3850547)
chr5 (122-240)||(6118297-6118414)
chr5 (122-240)||(18633763-18633880)
chr5 (122-240)||(30888241-30888358)
chr5 (122-239)||(27916542-27916658)
chr5 (139-240)||(35166968-35167069)
chr5 (171-240)||(7075764-7075833)
chr5 (122-240)||(16038542-16038659)
chr5 (122-240)||(28863637-28863754)
chr5 (126-240)||(29692895-29693008)
chr5 (122-240)||(31037476-31037593)
chr5 (122-240)||(35165962-35166079)
chr5 (122-240)||(36577800-36577917)
chr5 (122-240)||(38496500-38496617)
chr5 (122-239)||(13990686-13990802)
chr5 (126-234)||(10743864-10743971)
chr5 (124-239)||(16616444-16616558)
chr5 (121-240)||(29151596-29151714)
chr5 (122-240)||(5614332-5614449)
chr5 (122-240)||(5950253-5950370)
chr5 (122-240)||(9179725-9179841)
chr5 (171-240)||(14318204-14318273)
chr5 (122-240)||(15635456-15635573)
chr5 (122-240)||(29366752-29366869)
chr5 (122-240)||(38786238-38786354)
chr5 (122-240)||(42207321-42207438)
chr5 (139-240)||(2217660-2217761)
chr5 (139-240)||(27850179-27850280)
chr5 (124-240)||(28550908-28551023)
chr5 (124-240)||(29172606-29172721)
chr5 (124-240)||(37090544-37090659)
chr5 (139-239)||(38962897-38962997)
chr5 (122-245)||(23382107-23382229)
chr5 (122-240)||(25561786-25561905)
chr5 (138-240)||(293995-294097)
chr5 (171-240)||(21050702-21050771)
chr5 (171-240)||(29875528-29875597)
chr5 (124-240)||(25778964-25779079)
chr5 (171-240)||(9532318-9532387)
chr5 (139-240)||(18046154-18046255)
chr5 (123-240)||(33335827-33335943)
chr5 (171-240)||(10409059-10409128)
chr5 (175-240)||(21125076-21125141)
chr5 (175-240)||(30800654-30800719)
chr5 (171-240)||(39379357-39379425)
chr5 (185-240)||(39761480-39761535)
chr5 (25-75)||(9179906-9179958)
chr5 (122-233)||(24782086-24782196)
chr5 (207-240)||(31155508-31155541)
chr5 (124-240)||(4203535-4203650)
chr5 (171-210)||(40038624-40038663)
chr5 (207-240)||(20985993-20986026)
chr5 (207-240)||(31156069-31156102)
chr5 (208-240)||(5917190-5917222)
chr5 (208-240)||(19565531-19565563)
chr5 (208-240)||(42553912-42553944)
[»] chr6 (51 HSPs)
chr6 (122-240)||(19275844-19275959)
chr6 (122-240)||(6468475-6468592)
chr6 (122-240)||(21995144-21995262)
chr6 (124-240)||(12612161-12612276)
chr6 (122-240)||(2373296-2373413)
chr6 (122-240)||(7155877-7155994)
chr6 (122-240)||(24273918-24274035)
chr6 (125-240)||(33131607-33131721)
chr6 (122-240)||(317889-318006)
chr6 (122-240)||(8680856-8680973)
chr6 (122-240)||(15076007-15076124)
chr6 (171-240)||(23770325-23770394)
chr6 (122-240)||(32885753-32885870)
chr6 (122-240)||(33801546-33801663)
chr6 (139-239)||(14655574-14655674)
chr6 (122-240)||(2616038-2616155)
chr6 (171-240)||(9896442-9896511)
chr6 (122-240)||(15116752-15116869)
chr6 (122-240)||(17321357-17321474)
chr6 (122-240)||(17321490-17321607)
chr6 (124-240)||(11129283-11129398)
chr6 (133-240)||(7323996-7324102)
chr6 (171-240)||(777842-777911)
chr6 (171-240)||(15962156-15962225)
chr6 (122-240)||(26375772-26375889)
chr6 (122-240)||(31166950-31167067)
chr6 (123-240)||(24692784-24692900)
chr6 (122-239)||(34582610-34582726)
chr6 (145-240)||(494565-494660)
chr6 (171-240)||(543526-543595)
chr6 (122-240)||(3356304-3356421)
chr6 (122-240)||(6591244-6591361)
chr6 (122-240)||(10091114-10091231)
chr6 (122-212)||(14428729-14428818)
chr6 (185-240)||(22822398-22822453)
chr6 (124-240)||(30928848-30928963)
chr6 (171-240)||(5286714-5286786)
chr6 (122-240)||(1890140-1890257)
chr6 (122-222)||(19296227-19296326)
chr6 (189-240)||(33808786-33808837)
chr6 (171-240)||(34990118-34990187)
chr6 (200-240)||(20582774-20582814)
chr6 (200-240)||(33746881-33746921)
chr6 (200-240)||(16368766-16368806)
chr6 (176-240)||(25431672-25431736)
chr6 (189-240)||(11448687-11448738)
chr6 (200-239)||(16766458-16766497)
chr6 (171-210)||(23502306-23502345)
chr6 (200-237)||(6851416-6851453)
chr6 (207-240)||(21385488-21385521)
chr6 (208-240)||(6412282-6412314)
[»] chr1 (74 HSPs)
chr1 (122-245)||(24649430-24649552)
chr1 (117-240)||(48609398-48609519)
chr1 (122-240)||(33379967-33380084)
chr1 (124-240)||(22919764-22919879)
chr1 (124-240)||(26191440-26191555)
chr1 (125-240)||(45290540-45290654)
chr1 (125-240)||(46868310-46868424)
chr1 (122-240)||(18473352-18473469)
chr1 (122-240)||(48955868-48955985)
chr1 (122-240)||(52254261-52254378)
chr1 (123-240)||(2733265-2733381)
chr1 (122-239)||(34808274-34808390)
chr1 (124-240)||(11822085-11822200)
chr1 (124-240)||(13770571-13770686)
chr1 (124-240)||(18302186-18302301)
chr1 (124-240)||(20756101-20756216)
chr1 (122-228)||(18899950-18900054)
chr1 (171-240)||(1811074-1811143)
chr1 (122-240)||(10552116-10552233)
chr1 (122-240)||(12361091-12361208)
chr1 (122-236)||(16083132-16083244)
chr1 (122-240)||(21383182-21383299)
chr1 (122-240)||(32454093-32454210)
chr1 (171-240)||(39303799-39303868)
chr1 (122-240)||(41881174-41881291)
chr1 (122-239)||(29072578-29072694)
chr1 (122-239)||(32728853-32728969)
chr1 (122-241)||(7001698-7001816)
chr1 (122-240)||(37545755-37545870)
chr1 (122-240)||(4323909-4324026)
chr1 (122-240)||(19622736-19622853)
chr1 (171-240)||(26442703-26442772)
chr1 (122-240)||(29688235-29688352)
chr1 (122-240)||(32626696-32626813)
chr1 (171-240)||(35005513-35005582)
chr1 (122-239)||(31258420-31258536)
chr1 (122-240)||(3753290-3753408)
chr1 (171-240)||(7818905-7818974)
chr1 (171-240)||(13260114-13260183)
chr1 (122-240)||(14007567-14007684)
chr1 (171-240)||(17984499-17984568)
chr1 (171-240)||(35307913-35307982)
chr1 (122-240)||(41358466-41358583)
chr1 (171-240)||(49226364-49226433)
chr1 (171-239)||(21391182-21391250)
chr1 (171-240)||(26062085-26062154)
chr1 (139-240)||(3679720-3679821)
chr1 (121-240)||(27521654-27521774)
chr1 (124-240)||(34383028-34383143)
chr1 (122-229)||(1159654-1159760)
chr1 (122-240)||(45368655-45368771)
chr1 (121-240)||(50429013-50429130)
chr1 (122-240)||(15335093-15335214)
chr1 (139-215)||(33067559-33067635)
chr1 (173-237)||(4360398-4360462)
chr1 (200-240)||(52331573-52331613)
chr1 (171-210)||(24510071-24510110)
chr1 (200-240)||(7709868-7709908)
chr1 (171-215)||(18079528-18079572)
chr1 (200-240)||(34492395-34492435)
chr1 (171-215)||(48730445-48730489)
chr1 (171-205)||(5058854-5058888)
chr1 (172-210)||(41738926-41738964)
chr1 (171-240)||(22953360-22953429)
chr1 (207-240)||(24507747-24507780)
chr1 (207-240)||(31060850-31060883)
chr1 (207-240)||(38164199-38164232)
chr1 (139-212)||(990183-990256)
chr1 (208-240)||(12360872-12360904)
chr1 (208-240)||(15526266-15526298)
chr1 (208-240)||(30322993-30323025)
chr1 (208-240)||(35056594-35056626)
chr1 (208-240)||(40718174-40718206)
chr1 (174-210)||(49923659-49923695)
[»] scaffold0003 (1 HSPs)
scaffold0003 (122-240)||(366079-366196)
[»] chr7 (62 HSPs)
chr7 (122-240)||(10358083-10358200)
chr7 (124-240)||(13769854-13769968)
chr7 (121-240)||(31310482-31310601)
chr7 (122-244)||(5308486-5308607)
chr7 (122-236)||(23816842-23816955)
chr7 (122-236)||(48358884-48358997)
chr7 (139-240)||(19757846-19757947)
chr7 (121-240)||(31732254-31732372)
chr7 (124-239)||(46648495-46648609)
chr7 (122-240)||(488793-488910)
chr7 (122-240)||(18311660-18311777)
chr7 (171-240)||(19465746-19465815)
chr7 (122-240)||(45021576-45021693)
chr7 (122-240)||(45073445-45073562)
chr7 (122-240)||(1007032-1007149)
chr7 (122-240)||(6108500-6108617)
chr7 (122-240)||(17999527-17999644)
chr7 (122-240)||(20388354-20388471)
chr7 (122-240)||(21554556-21554673)
chr7 (122-240)||(28911658-28911775)
chr7 (171-240)||(32189198-32189267)
chr7 (172-237)||(43300737-43300802)
chr7 (122-240)||(46304185-46304302)
chr7 (139-240)||(39719450-39719551)
chr7 (122-233)||(7432032-7432142)
chr7 (121-240)||(21223486-21223604)
chr7 (171-240)||(12894205-12894274)
chr7 (122-240)||(18022446-18022563)
chr7 (122-236)||(19561228-19561341)
chr7 (122-240)||(35015022-35015139)
chr7 (122-240)||(37372708-37372825)
chr7 (122-240)||(44508799-44508916)
chr7 (122-245)||(44344589-44344711)
chr7 (171-240)||(19783943-19784012)
chr7 (122-240)||(30352641-30352758)
chr7 (145-238)||(44403057-44403150)
chr7 (124-240)||(1559509-1559624)
chr7 (124-240)||(14738681-14738796)
chr7 (171-240)||(35210315-35210384)
chr7 (171-240)||(41365020-41365088)
chr7 (124-215)||(24953979-24954069)
chr7 (171-240)||(1974129-1974198)
chr7 (122-240)||(30709404-30709525)
chr7 (171-239)||(45671340-45671408)
chr7 (171-240)||(39833032-39833101)
chr7 (189-240)||(17854240-17854291)
chr7 (202-240)||(43058869-43058907)
chr7 (200-240)||(24825726-24825766)
chr7 (200-240)||(32792949-32792989)
chr7 (171-210)||(41054008-41054047)
chr7 (210-240)||(6509276-6509306)
chr7 (207-240)||(11324214-11324247)
chr7 (207-240)||(25092452-25092485)
chr7 (207-240)||(29198566-29198599)
chr7 (208-240)||(8144359-8144391)
chr7 (124-205)||(25547329-25547409)
chr7 (208-240)||(25988449-25988481)
chr7 (208-240)||(31503484-31503516)
chr7 (208-240)||(35469944-35469976)
chr7 (171-215)||(38186589-38186633)
chr7 (208-240)||(44568594-44568626)
chr7 (208-240)||(46829008-46829040)
[»] chr4 (68 HSPs)
chr4 (122-240)||(2180376-2180493)
chr4 (124-239)||(22099715-22099829)
chr4 (122-240)||(45593306-45593422)
chr4 (122-240)||(32365174-32365291)
chr4 (139-240)||(51545773-51545874)
chr4 (122-240)||(6827676-6827793)
chr4 (122-240)||(45505695-45505812)
chr4 (122-240)||(50714368-50714485)
chr4 (122-240)||(52441840-52441957)
chr4 (121-240)||(11285582-11285700)
chr4 (122-233)||(36702080-36702190)
chr4 (171-240)||(4279137-4279206)
chr4 (122-240)||(13479350-13479467)
chr4 (122-240)||(35415380-35415497)
chr4 (122-240)||(41346022-41346138)
chr4 (122-240)||(41920887-41921004)
chr4 (122-240)||(51708830-51708947)
chr4 (122-240)||(52017672-52017789)
chr4 (124-237)||(34355046-34355158)
chr4 (124-240)||(27008210-27008325)
chr4 (121-240)||(55482273-55482391)
chr4 (171-240)||(16712496-16712565)
chr4 (122-240)||(24474765-24474882)
chr4 (122-240)||(27427923-27428040)
chr4 (122-240)||(29463716-29463833)
chr4 (122-240)||(38054625-38054742)
chr4 (122-240)||(41620058-41620175)
chr4 (171-240)||(50822101-50822170)
chr4 (171-239)||(34361949-34362017)
chr4 (139-240)||(55072486-55072587)
chr4 (122-240)||(43368544-43368662)
chr4 (122-240)||(46087839-46087954)
chr4 (122-240)||(9446127-9446244)
chr4 (122-240)||(22584413-22584530)
chr4 (124-240)||(18135919-18136034)
chr4 (124-240)||(49123127-49123242)
chr4 (173-234)||(123703-123764)
chr4 (122-240)||(18205235-18205352)
chr4 (171-240)||(18830973-18831042)
chr4 (175-240)||(32208673-32208738)
chr4 (122-240)||(35763757-35763874)
chr4 (171-235)||(5063132-5063196)
chr4 (122-240)||(9289347-9289460)
chr4 (200-244)||(15874397-15874441)
chr4 (122-240)||(3178763-3178880)
chr4 (171-240)||(52429840-52429909)
chr4 (200-240)||(20878862-20878902)
chr4 (200-240)||(41316068-41316108)
chr4 (200-240)||(42306073-42306113)
chr4 (200-240)||(55893380-55893420)
chr4 (125-240)||(13064240-13064354)
chr4 (122-240)||(29420340-29420457)
chr4 (200-240)||(23254543-23254583)
chr4 (208-240)||(25358284-25358316)
chr4 (200-240)||(38484631-38484671)
chr4 (209-240)||(46292554-46292585)
chr4 (172-210)||(6353470-6353508)
chr4 (210-240)||(28448897-28448927)
chr4 (171-204)||(5827784-5827817)
chr4 (207-240)||(19903559-19903592)
chr4 (207-240)||(29499245-29499278)
chr4 (207-240)||(30046696-30046729)
chr4 (207-240)||(30061037-30061070)
chr4 (122-212)||(53717004-53717093)
chr4 (208-240)||(23779129-23779161)
chr4 (208-240)||(35420606-35420638)
chr4 (208-240)||(50753986-50754018)
chr4 (208-240)||(53915951-53915983)
[»] chr3 (75 HSPs)
chr3 (122-240)||(30552224-30552341)
chr3 (122-240)||(53701439-53701556)
chr3 (122-239)||(4513425-4513541)
chr3 (117-240)||(43440567-43440689)
chr3 (122-240)||(15016550-15016667)
chr3 (122-239)||(39436912-39437028)
chr3 (124-240)||(46186573-46186688)
chr3 (122-240)||(4814704-4814821)
chr3 (122-240)||(10778535-10778652)
chr3 (122-240)||(22156010-22156127)
chr3 (122-240)||(28427411-28427528)
chr3 (122-240)||(51500489-51500606)
chr3 (124-240)||(3830213-3830328)
chr3 (145-240)||(15286307-15286402)
chr3 (122-240)||(275522-275639)
chr3 (122-240)||(3151914-3152031)
chr3 (122-240)||(4950170-4950287)
chr3 (122-240)||(10977058-10977175)
chr3 (122-240)||(13584084-13584201)
chr3 (122-240)||(18175867-18175984)
chr3 (122-240)||(20757479-20757596)
chr3 (122-240)||(39288702-39288819)
chr3 (139-240)||(37506963-37507064)
chr3 (122-231)||(51759900-51760008)
chr3 (122-234)||(8510295-8510406)
chr3 (122-240)||(14633690-14633807)
chr3 (122-240)||(20907260-20907377)
chr3 (122-240)||(21159619-21159736)
chr3 (122-240)||(45320783-45320900)
chr3 (171-240)||(50196426-50196495)
chr3 (122-239)||(7518251-7518367)
chr3 (122-240)||(16123221-16123338)
chr3 (122-240)||(29955379-29955496)
chr3 (122-240)||(30004533-30004650)
chr3 (122-240)||(34238678-34238795)
chr3 (122-240)||(39072016-39072134)
chr3 (126-240)||(40169456-40169569)
chr3 (122-240)||(45161192-45161309)
chr3 (171-240)||(49670641-49670710)
chr3 (122-240)||(51834745-51834862)
chr3 (139-240)||(25710675-25710776)
chr3 (123-240)||(45521630-45521746)
chr3 (140-240)||(12673808-12673908)
chr3 (124-240)||(19656706-19656821)
chr3 (121-240)||(50261744-50261861)
chr3 (122-240)||(26799969-26800086)
chr3 (122-232)||(30130237-30130346)
chr3 (171-240)||(30268611-30268679)
chr3 (171-240)||(30426088-30426157)
chr3 (171-240)||(9863206-9863275)
chr3 (171-240)||(31869760-31869829)
chr3 (185-239)||(40560626-40560680)
chr3 (171-240)||(46901228-46901296)
chr3 (185-240)||(5048158-5048213)
chr3 (185-240)||(33794587-33794642)
chr3 (171-240)||(20612702-20612771)
chr3 (200-240)||(14783904-14783944)
chr3 (200-240)||(31724522-31724562)
chr3 (171-215)||(45313690-45313734)
chr3 (171-210)||(9596927-9596966)
chr3 (208-239)||(45313563-45313594)
chr3 (171-205)||(36732767-36732801)
chr3 (207-240)||(2439936-2439969)
chr3 (207-240)||(20124832-20124865)
chr3 (207-240)||(28552084-28552117)
chr3 (207-240)||(28942678-28942711)
chr3 (122-212)||(29446035-29446124)
chr3 (207-240)||(43441507-43441540)
chr3 (171-204)||(51058718-51058751)
chr3 (208-240)||(29955565-29955597)
chr3 (208-240)||(30004720-30004752)
chr3 (208-240)||(32119284-32119316)
chr3 (208-240)||(35936844-35936876)
chr3 (208-240)||(47005423-47005455)
chr3 (208-240)||(51550350-51550382)
[»] chr2 (59 HSPs)
chr2 (122-240)||(24483478-24483595)
chr2 (122-239)||(43597305-43597421)
chr2 (122-240)||(19183863-19183980)
chr2 (122-240)||(23989916-23990033)
chr2 (122-240)||(26814031-26814148)
chr2 (122-240)||(38980056-38980173)
chr2 (138-240)||(45442408-45442510)
chr2 (139-244)||(43592141-43592246)
chr2 (122-240)||(3838066-3838183)
chr2 (122-240)||(7814409-7814526)
chr2 (122-240)||(8046409-8046526)
chr2 (122-240)||(17541579-17541696)
chr2 (122-240)||(31326055-31326171)
chr2 (171-240)||(32691440-32691509)
chr2 (122-239)||(24483611-24483727)
chr2 (125-240)||(7814542-7814656)
chr2 (122-240)||(14392933-14393050)
chr2 (122-240)||(38731907-38732024)
chr2 (122-240)||(40302056-40302173)
chr2 (122-240)||(43710459-43710576)
chr2 (122-240)||(43788994-43789111)
chr2 (122-233)||(37271912-37272022)
chr2 (171-240)||(16900023-16900092)
chr2 (171-240)||(16993414-16993483)
chr2 (122-240)||(22881773-22881890)
chr2 (171-240)||(33732987-33733056)
chr2 (123-240)||(19831598-19831714)
chr2 (123-240)||(40786541-40786657)
chr2 (139-240)||(44985717-44985818)
chr2 (171-240)||(1497747-1497816)
chr2 (175-240)||(20658191-20658256)
chr2 (124-237)||(10665065-10665177)
chr2 (123-240)||(41791099-41791215)
chr2 (139-239)||(41693806-41693906)
chr2 (171-240)||(5790703-5790770)
chr2 (175-240)||(10374880-10374946)
chr2 (122-240)||(11713647-11713764)
chr2 (171-240)||(25954229-25954298)
chr2 (171-239)||(26238939-26239008)
chr2 (171-240)||(29865315-29865384)
chr2 (122-240)||(44073609-44073726)
chr2 (171-236)||(26707999-26708064)
chr2 (171-240)||(31225844-31225912)
chr2 (127-221)||(44993881-44993974)
chr2 (200-240)||(4731849-4731889)
chr2 (200-240)||(12414003-12414043)
chr2 (200-240)||(12426063-12426103)
chr2 (122-240)||(17912529-17912647)
chr2 (171-240)||(36622375-36622443)
chr2 (171-210)||(13215257-13215296)
chr2 (206-240)||(14003646-14003680)
chr2 (171-204)||(1295385-1295418)
chr2 (171-232)||(12835454-12835514)
chr2 (207-240)||(15842727-15842760)
chr2 (208-240)||(11788321-11788353)
chr2 (208-240)||(13215124-13215156)
chr2 (208-240)||(24358680-24358712)
chr2 (208-240)||(29859776-29859808)
chr2 (171-215)||(35155421-35155465)
[»] scaffold0060 (1 HSPs)
scaffold0060 (124-240)||(8413-8528)
[»] scaffold0811 (1 HSPs)
scaffold0811 (122-240)||(1446-1563)
[»] scaffold0373 (1 HSPs)
scaffold0373 (122-240)||(8628-8745)
[»] scaffold0370 (1 HSPs)
scaffold0370 (122-236)||(96-209)
[»] scaffold0179 (1 HSPs)
scaffold0179 (122-240)||(3095-3212)
[»] scaffold0002 (1 HSPs)
scaffold0002 (122-240)||(94138-94255)
[»] scaffold0021 (1 HSPs)
scaffold0021 (122-239)||(12263-12379)
[»] scaffold0347 (1 HSPs)
scaffold0347 (122-240)||(4116-4233)
[»] scaffold0065 (1 HSPs)
scaffold0065 (172-240)||(3723-3791)
[»] scaffold0016 (1 HSPs)
scaffold0016 (122-245)||(10236-10358)
[»] scaffold1001 (1 HSPs)
scaffold1001 (122-240)||(2856-2973)
[»] scaffold0535 (1 HSPs)
scaffold0535 (171-240)||(8831-8900)
[»] scaffold0210 (1 HSPs)
scaffold0210 (171-240)||(14824-14893)
[»] scaffold0123 (1 HSPs)
scaffold0123 (139-240)||(17846-17947)
[»] scaffold0051 (1 HSPs)
scaffold0051 (122-229)||(5520-5626)
[»] scaffold0159 (1 HSPs)
scaffold0159 (171-240)||(35076-35143)
[»] scaffold0032 (1 HSPs)
scaffold0032 (182-240)||(33073-33131)
[»] scaffold0428 (1 HSPs)
scaffold0428 (200-240)||(7659-7699)
[»] scaffold0166 (1 HSPs)
scaffold0166 (122-233)||(24469-24579)
[»] scaffold0291 (2 HSPs)
scaffold0291 (200-240)||(11123-11163)
scaffold0291 (200-240)||(11221-11261)
[»] scaffold0712 (1 HSPs)
scaffold0712 (139-215)||(5306-5382)
[»] scaffold0709 (1 HSPs)
scaffold0709 (139-215)||(5326-5402)
[»] scaffold0119 (1 HSPs)
scaffold0119 (171-210)||(16852-16891)
[»] scaffold0085 (1 HSPs)
scaffold0085 (171-210)||(34917-34956)


Alignment Details
Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 32418599 - 32418482
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| |||||||||||||||       ||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  32418599 cctgcaaaattttttgttttttaaaa-tagtctctgaccccatttttgtgatgatttgcatacgtggcacatgatgactaaaccgattttgtagtttttg 32418501  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  32418500 gtccctgcaaaatattttg 32418482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 15719738 - 15719853
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||| ||| ||||||||||||| ||||| |||||||||       ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15719738 tgcaaatttttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacctattttgtagtttttggt 15719836  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  15719837 ccctgcaaaatattttg 15719853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 18549286 - 18549401
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18549286 tgcaaaattttttgtttttgaaaa-tagtctctgaccccatttttgtgatgatttgcatacgtggcacatgatgacttaacctattttgtagtttttggt 18549384  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  18549385 ccctgcaaaatattttg 18549401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 14488811 - 14488912
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14488811 tttttgaaaatagtccctgaccccatttttgtgatgatttgcatatgtggcacatgatgactgaacccattttgtagtttttggtccctgcaaaatattt 14488910  T
Q  239 tg 240  Q
    ||    
T  14488911 tg 14488912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 21125942 - 21125825
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    ||||||||||||| ||||||||||||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||||    
T  21125942 tcctgcaaaattttttgttttttaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagttttt 21125844  T
Q  221 ggtccctgcaaaatatttt 239  Q
    |||||||||||||||||||    
T  21125843 ggtccctgcaaaatatttt 21125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 29488031 - 29487914
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||||||||||||| |||||  ||||||||       |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  29488031 cctgcaaatttttttgttttttaaaa-tagtccttgaccccatttttgtgatgatttgcatatgtggcacatgatgactgaaccctttttgtagtttttg 29487933  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  29487932 gtccctgcaaaatattttg 29487914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 33526133 - 33526250
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  33526133 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttatagtttttg 33526231  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  33526232 gtccttgcaaaatattttg 33526250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 43727348 - 43727228
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| ||||||||||||| |||||  ||||||||       ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  43727348 tgcaaaattttttgttttttaaaa-tagtccttgaccccatttttgtgatgatttggatacgtggcacatgatgactgaacccattttgtagtttttggt 43727250  T
Q  224 ccctgcaaaatattttggttta 245  Q
    ||||||||||||||||| ||||    
T  43727249 ccctgcaaaatattttgtttta 43727228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 7578451 - 7578340
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| |||||| |||||| |       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  7578451 cctgcaaaattttttgttttttaaaa-tagtctttgacccaatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttg 7578353  T
Q  222 gtccctgcaaaat 234  Q
    |||||||||||||    
T  7578352 gtccctgcaaaat 7578340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 4016983 - 4017100
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  4016983 cctgcaaaattttttgttttttaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 4017081  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  4017082 gtccatgcaaaatattttg 4017100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 10755403 - 10755334
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10755403 gatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttggtccctgcaaaatattttg 10755334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 43477433 - 43477316
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| | | ||||||||||||||||| |||||||||||||||    
T  43477433 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgagtcacatgatgactgaaccgattttgtagtttttg 43477335  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  43477334 gtccttgcaaaatattttg 43477316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 30337004 - 30337119
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| |||| | |||||||||||||| |||||||||||||||||    
T  30337004 tgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggtatatgatgactgaacccattttgtagtttttggt 30337102  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  30337103 ccctgcaaaatattttg 30337119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 1162990 - 1163109
Alignment:
Q  122 cctgcaaaatttattgt-tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    |||||||||||| |||| ||||| |||||||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||||    
T  1162990 cctgcaaaattttttgtgtttttgaaaatagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagttttt 1163089  T
Q  221 ggtccctgcaaaatattttg 240  Q
    |||||||||| |||||||||    
T  1163090 ggtccctgcagaatattttg 1163109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 14238825 - 14238946
Alignment:
Q  117 ttggtcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagt 216  Q
    ||||||||||||||||  ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  14238825 ttggtcctgcaaaattatttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacctgatgactgaacccattttgtagt 14238923  T
Q  217 ttttggtccctgcaaaatattttg 240  Q
    ||||||| |||||||||| |||||    
T  14238924 ttttggt-cctgcaaaattttttg 14238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 1525890 - 1526007
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  1525890 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcataagtggcacattataactgaaccaattttgtagtttttg 1525988  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||| ||||||    
T  1525989 gtccctgcaaaaaattttg 1526007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 33636403 - 33636520
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || || ||||| |||||||||||||||    
T  33636403 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataacagaaccaattttgtagtttttg 33636501  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  33636502 gtccctgcaaaatattttg 33636520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 38930382 - 38930499
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  38930382 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 38930480  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||| |||||||||||||||    
T  38930481 gtcgctgcaaaatattttg 38930499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 24187663 - 24187764
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| |||||||||||||||||||       |||||||||||||  |||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  24187663 tttttgaaaatagtctctgaccccacttttgtgatgatttgcatacttggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 24187762  T
Q  239 tg 240  Q
    ||    
T  24187763 tg 24187764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 6146868 - 6146751
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  6146868 cctgcaaatttttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 6146770  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  6146769 gtccctgcaaaattttttg 6146751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 8094560 - 8094677
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||    
T  8094560 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgacacattataactgaaccaattttatagtttttg 8094658  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  8094659 gtccctgcaaaatattttg 8094677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 10776418 - 10776301
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       |||||||| |||| ||||||||| ||||||||||| |||||||||||||||    
T  10776418 cctgcaaaattttttgtttttgaaaa-tagtccttgaccccacttttgtgatgattttcatacgtggcacattatgactgaaccaattttgtagtttttg 10776320  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||| |||||||||||    
T  10776319 gtccctgtaaaatattttg 10776301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 14496941 - 14497010
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||    
T  14496941 gatgatttgcatatgtggcacatgatgactgaacccattttgtaatttttgatccttgcaaaatattttg 14497010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 28398959 - 28398842
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| || ||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  28398959 cctgcaaaattttttgtttttgaaaa-tagtccctaaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 28398861  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  28398860 gtccctgcaaaatattttg 28398842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 32040293 - 32040176
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||||||| | || | |||||| |||||||||||||||    
T  32040293 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacgttataattgaaccaattttgtagtttttg 32040195  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  32040194 atccctgcaaaatattttg 32040176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 14495304 - 14495203
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||| | || |||||||| ||||||||||||||||||||||||||||||||    
T  14495304 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtggcacctaataactgaaccaattttgtagtttttggtccctgcaaaatattt 14495205  T
Q  239 tg 240  Q
    ||    
T  14495204 tg 14495203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 22917845 - 22917730
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||||    
T  22917845 tgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttatagtttttggt 22917747  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  22917746 ccctgcaaaatattttg 22917730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 40844462 - 40844339
Alignment:
Q  117 ttggtcctg-caaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||||||| ||||| || ||||||||||||| ||||| |||| ||||       ||||||||||||| |||||||||||||| ||| || |||||||||    
T  40844462 ttggtcctggcaaaagtttttgttttttaaaa-tagtccctgatcccatttttgtgatgatttgcatacgtggcacatgatgattgagccgattttgtag 40844364  T
Q  216 tttttggtccctgcaaaatattttg 240  Q
    |||||||||| ||||||||||||||    
T  40844363 tttttggtccttgcaaaatattttg 40844339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 40066569 - 40066691
Alignment:
Q  117 ttggtcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagt 216  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| || |    
T  40066569 ttggtcctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttatgatgatttgcatacgtgacacattataactgaaccaattttataat 40066667  T
Q  217 ttttggtccctgcaaaatattttg 240  Q
    ||||||||  ||||||||||||||    
T  40066668 ttttggtctatgcaaaatattttg 40066691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 16643963 - 16643846
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| || ||||||       ||||||||||||| ||||||||| || |||||||| ||||| |||||||||    
T  16643963 cctgcaaaattttttgtttttgaaaa-tagtcccttaccccaattttgtgatgatttgcatacgtggcacattataactgaaccaattttctagtttttg 16643865  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||| |||||||||||    
T  16643864 gtccctgtaaaatattttg 16643846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 19494199 - 19494316
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||| |||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||| |     
T  19494199 cctgcaaaattttttggttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttcta 19494297  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  19494298 gtccctgcaaaatattttg 19494316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 27341510 - 27341393
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||| | |||||||| |||| |||||||||||||||       | || ||||| || ||||||||| || |||||||| |||||||||||||||    
T  27341510 cctgcaaaatattttgtttttgaaaa-tagtctctgaccccacttttgcggtggtttgcttacgtggcacattataactgaaccaattttgtagtttttg 27341412  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  27341411 gtccctgcaaaatattttg 27341393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 25131206 - 25131306
Alignment:
Q  140 ttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    |||| ||||||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||||| ||||||||||    
T  25131206 ttttgaaaatagtccctgaccccacttttatgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtccctgaaaaatatttt 25131305  T
Q  240 g 240  Q
    |    
T  25131306 g 25131306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 1408274 - 1408157
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| || ||||| |||| ||||| |||||||||       ||||||||||||| |||||| || || |||||||| ||||| |||||||||    
T  1408274 cctgcaaaattttttatttttgaaaa-tagtcactgaccccacttttgtgatgatttgcatacgtggcatattataactgaaccaattttatagtttttg 1408176  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  1408175 gtccttgcaaaatattttg 1408157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 7272549 - 7272618
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| |||  |||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  7272549 gatgatttgcatacgtgttacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 7272618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 22650547 - 22650664
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||| |||||       ||||||||||||| ||||||||| || || ||| | |||||||||||||||    
T  22650547 cctgcaaaattttttgtttttgaaaa-tagtccctggccccacttttgtgatgatttgcatacgtggcacattataaccgaatcaattttgtagtttttg 22650645  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||    
T  22650646 gtccctacaaaatattttg 22650664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 16789245 - 16789177
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||||||||||||||||    
T  16789245 gatgatttgcatacgtgacacattataactaaaccaattttgtagtttttggtccctgcaaaatatttt 16789177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 21509775 - 21509883
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || ||||||||  ||||||||||||||    
T  21509775 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccagttttgtagtttttg 21509873  T
Q  222 gtccctgcaa 231  Q
     |||||||||    
T  21509874 atccctgcaa 21509883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 24954915 - 24954814
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||| ||||| || ||  |||| ||||||||||||||||||||||||||||||||    
T  24954915 tttttgaaaatagtccctgaccccacttttgtgatgatttgcataagtgacacattataacaaaaccaattttgtagtttttggtccctgcaaaatattt 24954816  T
Q  239 tg 240  Q
    ||    
T  24954815 tg 24954814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 19963082 - 19963198
Alignment:
Q  127 aaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtcc- 225  Q
    ||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| |||| | ||||| |||||||| |||||||||||||||||||     
T  19963082 aaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggtatatgataactgaaccgattttgtagtttttggtccg 19963180  T
Q  226 ---ctgcaaaatattttg 240  Q
       |||||||||||||||    
T  19963181 tctctgcaaaatattttg 19963198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 4375770 - 4375867
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  4375770 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagttttt 4375867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 6146595 - 6146712
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||  |||||||||       ||||||||||||| ||||||||| || |||||||| |||  || |||||||    
T  6146595 cctgcaaaattttttgtttttgaaaa-tagttcctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattaggttgtttttg 6146693  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  6146694 gtccctgcaaaattttttg 6146712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 35143718 - 35143649
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||||||||| || ||||| ||||| ||||||||||||| |||||||| |||||    
T  35143718 gatgatttgcataagtggcacatgataaccgaaccgattttatagtttttggtccttgcaaaattttttg 35143649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 1686480 - 1686522
Alignment:
Q  198 actgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  1686480 actgaaccaattttgtagtttttggtccctgcaaaatattttg 1686522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 29158435 - 29158552
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||| ||||||       ||| ||||  ||| ||| ||||  || |||||||| |||||||||||||||    
T  29158435 cctgcaaaattttttgtttttgaaaa-tagtctcttaccccacttttgtgataatttatatacgtgacacaatataactgaaccaattttgtagtttttg 29158533  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  29158534 gtccctgcaaaattttttg 29158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 3068943 - 3068983
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  3068943 tgaacccattttgtagtttttggtccctgcaaaatattttg 3068983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 3305825 - 3305785
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  3305825 tgaacccattttgtagtttttggtccctgcaaaatattttg 3305785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 32195360 - 32195452
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    |||||||||| | |||||||| |||| |||||||||||||||       |||||| |||||| ||| |||||||||| ||||||||||||||||    
T  32195360 cctgcaaaatattttgtttttgaaaa-tagtctctgaccccacttttatgatgatatgcatacgtgacacatgatgattgaacctattttgtag 32195452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 23360500 - 23360544
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||    
T  23360500 gatgatttgcacatgtggcatatgatgattgaacctattttgtag 23360544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 37536148 - 37536182
Alignment:
Q  206 tattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| ||||||||||||||||||||||||||    
T  37536148 tattttgttgtttttggtccctgcaaaatattttg 37536182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 40493033 - 40493115
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacc 205  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || ||||||||    
T  40493033 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaacc 40493115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 4710157 - 4710124
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  4710157 attttgttgtttttggtccctgcaaaatattttg 4710124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 2728296 - 2728328
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  2728296 ttttgttgtttttggtccctgcaaaatattttg 2728328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 9496405 - 9496437
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  9496405 ttttgttgtttttggtccctgcaaaatattttg 9496437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 10873152 - 10873112
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctatttt 211  Q
    ||||||||||| | ||||||||||||||||||||| |||||    
T  10873152 gatgatttgcacacgtggcacatgatgactgaacccatttt 10873112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 13796532 - 13796500
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  13796532 ttttgttgtttttggtccctgcaaaatattttg 13796500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 28346458 - 28346490
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  28346458 ttttgttgtttttggtccctgcaaaatattttg 28346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 32725971 - 32726003
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  32725971 ttttgttgtttttggtccctgcaaaatattttg 32726003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 35097392 - 35097424
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  35097392 ttttgttgtttttggtccctgcaaaatattttg 35097424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 35346934 - 35346902
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  35346934 ttttgttgtttttggtccctgcaaaatattttg 35346902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 3850744 - 3850627
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||| | |||||||||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3850744 cctgcaaaattttttgttttttaata-tagtctctgaccccatttatgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttg 3850646  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  3850645 gtccctgcaaaatattttg 3850627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 34125386 - 34125502
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || ||||||||||||| ||||||||||||| |       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  34125386 cctgcaaaaatttttgttttttaaaa-tagtctctgaccc-atttttttgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttg 34125483  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  34125484 gtccctgcaaaatattttg 34125502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 3850547 - 3850430
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || ||||||||||||| |||||  ||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3850547 cctgcaaaaatttttgttttttaaaa-tagtccttgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttg 3850449  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  3850448 gtccctgcaaaatcttttg 3850430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 6118414 - 6118297
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  6118414 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 6118316  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  6118315 gtccctgcaaaatattttg 6118297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 18633880 - 18633763
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  18633880 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 18633782  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  18633781 gtccctgcaaaatattttg 18633763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 30888241 - 30888358
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       |||||||||||||| |||||||| || |||||||| |||||||||||||||    
T  30888241 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatatatggcacattataactgaaccaattttgtagtttttg 30888339  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  30888340 gtccctgcaaaatattttg 30888358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 27916542 - 27916658
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||| ||||||||| ||| || |||||||||||||| |||||||||||||||    
T  27916542 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgataatttgcatacgtgacagatgatgactgaaccaattttgtagtttttg 27916640  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  27916641 gtccctgcaaaatatttt 27916658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 35167069 - 35166968
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| |||||||||||||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  35167069 tttttgaaaatagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 35166970  T
Q  239 tg 240  Q
    ||    
T  35166969 tg 35166968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 7075833 - 7075764
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  7075833 gatgatttgcatatgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 7075764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 16038659 - 16038542
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||| ||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  16038659 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgattatttgcatacgtgacacattataactgaaccaattttgtagtttttg 16038561  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  16038560 gtccctgcaaaatattttg 16038542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 28863754 - 28863637
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  28863754 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgtcacatgatgactgaaccgattttgtagtttttg 28863656  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||| | ||||||||||||    
T  28863655 atcctttcaaaatattttg 28863637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 240
Target Start/End: Complemental strand, 29693008 - 29692895
Alignment:
Q  126 caaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtcc 225  Q
    |||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||||||    
T  29693008 caaaattttttgtttttgaaaa-tagtccctgaccccacttttatgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtcc 29692910  T
Q  226 ctgcaaaatattttg 240  Q
    |||||||||||||||    
T  29692909 ctgcaaaatattttg 29692895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 31037476 - 31037593
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||    
T  31037476 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttatagtttttg 31037574  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  31037575 gtccctgcaaaatattttg 31037593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 35166079 - 35165962
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  35166079 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 35165981  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||| ||||||    
T  35165980 gtccctgcaaaaaattttg 35165962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 36577800 - 36577917
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  36577800 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 36577898  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  36577899 gtccctgcaaaatattttg 36577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 38496500 - 38496617
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||    
T  38496500 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttatagtttttg 38496598  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  38496599 gtccctgcaaaatattttg 38496617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 13990686 - 13990802
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| |||||  |||||| |       ||||||||||||| |||||||||||||||| |||| ||||||||||||||     
T  13990686 cctgcaaaattttttgttttttaaaa-tagtccatgaccctatttttgtgatgatttgcatacgtggcacatgatgactcaacccattttgtagttttta 13990784  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  13990785 gtccctgcaaaatatttt 13990802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 10743971 - 10743864
Alignment:
Q  126 caaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtcc 225  Q
    |||| ||| ||||||||||||| ||||| |||||||||       ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10743971 caaatttttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatatgtgtcacatgatgactgaaccgattttgtagtttttggtcc 10743873  T
Q  226 ctgcaaaat 234  Q
     ||||||||    
T  10743872 ttgcaaaat 10743864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 16616444 - 16616558
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||||    
T  16616444 tgcaaaattttttgtttttgaaaa-tagtccatgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggt 16616542  T
Q  224 ccctgcaaaatatttt 239  Q
    ||||||||||||||||    
T  16616543 ccctgcaaaatatttt 16616558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 29151596 - 29151714
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    ||||| ||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||||    
T  29151596 tcctgtaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagttttt 29151694  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  29151695 ggtccctgcaaaatattttg 29151714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 5614449 - 5614332
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  5614449 cctgcaaaattttttgtttttgaaaa-tagtccctgacaccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 5614351  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  5614350 gtccatgcaaaatattttg 5614332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 5950253 - 5950370
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||| ||||||||       ||||||||||||| ||||||||| || ||||| || |||||||||||||||    
T  5950253 cctgcaaaattttttgtttttgaaaa-tagtctttgaccccacttttgtgatgatttgcatacgtggcacattataactgatccaattttgtagtttttg 5950351  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||| |||||||||||||||    
T  5950352 gtctctgcaaaatattttg 5950370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 9179841 - 9179725
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || ||||||||||||| ||||||| |||||||       |||||||||| || |||||||||||| || ||||||||||| |||||||||    
T  9179841 cctgcaaaaatt-ttgttttttaaaa-tagtctccgaccccattattgtgatgatttgcctacgtggcacatgataaccgaacctattttatagtttttg 9179744  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  9179743 gtccctgcaaaatattttg 9179725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 14318273 - 14318204
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  14318273 gatgatttgcatacgtgacacatgatgactgaacccattttgtagtttttgatccctgcaaaatattttg 14318204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 15635456 - 15635573
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  15635456 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 15635554  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| |||||||| |||||    
T  15635555 gtccgtgcaaaattttttg 15635573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 29366869 - 29366752
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| || || |||||||||       |||||||| |||| ||| |||||||||| |||||||||||| |||||||||    
T  29366869 cctgcaaaattttttgttttttaaaa-taatccctgaccccatttttgtgatgatttacatacgtgacacatgatgattgaacctattttatagtttttg 29366771  T
Q  222 gtccctgcaaaatattttg 240  Q
    || ||||||||||||||||    
T  29366770 gttcctgcaaaatattttg 29366752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 38786238 - 38786354
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||| ||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  38786238 cctgcaaaattttttgtttttgaaaa-tagtctctgacctcatttttgtgatgatttgcatacgtgacacattataactgaacc-attttgtagtttttg 38786335  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  38786336 gtccctgcaaaatattttg 38786354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 42207321 - 42207438
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  42207321 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 42207419  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  42207420 atccctgcaaaatattttg 42207438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 2217761 - 2217660
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||| ||||||||||||||||||||||||||    
T  2217761 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttttagtttttggtccctgcaaaatattt 2217662  T
Q  239 tg 240  Q
    ||    
T  2217661 tg 2217660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 27850280 - 27850179
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       |||| |||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  27850280 tttttgaaaatagtccctgaccccacttttgtgatggtttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 27850181  T
Q  239 tg 240  Q
    ||    
T  27850180 tg 27850179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 28550908 - 28551023
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| || ||||||       |||||||||||||  |||||||| || |||||||| |||||||||||||||||    
T  28550908 tgcaaaattttttgtttttgaaaa-tagtccctaaccccacttttgtgatgatttgcatacatggcacattataactgaaccaattttgtagtttttggt 28551006  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  28551007 ccctgcaaaatattttg 28551023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 29172606 - 29172721
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||| ||||||||| ||||||||| || |||||||| |||||||||||||| ||    
T  29172606 tgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgattatttgcatacgtggcacattataactgaaccaattttgtagtttttcgt 29172704  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  29172705 ccctgcaaaatattttg 29172721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 37090659 - 37090544
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||  |||||||||||||||||    
T  37090659 tgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaactaattttgtagtttttggt 37090561  T
Q  224 ccctgcaaaatattttg 240  Q
    | |||||||||||||||    
T  37090560 ctctgcaaaatattttg 37090544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 38962997 - 38962897
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  38962997 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 38962898  T
Q  239 t 239  Q
    |    
T  38962897 t 38962897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 23382229 - 23382107
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || | |||||| |||||||||||||||    
T  23382229 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataattgaaccaattttgtagtttttg 23382131  T
Q  222 gtccctgcaaaatattttggttta 245  Q
    |||| |||||||||||||| ||||    
T  23382130 gtccatgcaaaatattttgtttta 23382107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 25561786 - 25561905
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnn-gatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    |||||||||||| |||||||| ||||  ||||||||||||||        |||||||||||||||| |||||| || ||||||   ||||||||||||||    
T  25561786 cctgcaaaattttttgtttttgaaaataagtctctgaccccaccttttgtgatgatttgcatatgtagcacattataactgaataaattttgtagttttt 25561885  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  25561886 ggtccctgcaaaatattttg 25561905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 294097 - 293995
Alignment:
Q  138 ttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatt 237  Q
    |||||| ||||||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||||||||||||||||||    
T  294097 ttttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttatagtttttggtccctgcaaaatatt 293998  T
Q  238 ttg 240  Q
    |||    
T  293997 ttg 293995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 21050702 - 21050771
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| |||||||||||||||||| |||||||||||||||    
T  21050702 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtctctgcaaaatattttg 21050771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 29875528 - 29875597
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||    
T  29875528 gatgatttgcatacgtggcacattataactgaaccaattttctagtttttggtccctgcaaaatattttg 29875597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 25779079 - 25778964
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||  ||||| |||||||||||    
T  25779079 tgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaactaattttatagtttttggt 25778981  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  25778980 ccctgcaaaatattttg 25778964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 9532318 - 9532387
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||||| ||| ||||| |||||||||||||| |||||||||||||||||||    
T  9532318 gatgatttgcatacgtgacacatgacgaccgaacccattttgtagtttttagtccctgcaaaatattttg 9532387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 18046255 - 18046154
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| |||||||||||||||||||       ||| ||||||||| ||| ||||| || |||||||| ||||| ||||| ||||||||||||||||||||    
T  18046255 tttttgaaaatagtctctgaccccacttttgtgataatttgcatacgtgtcacattataactgaaccaattttatagttcttggtccctgcaaaatattt 18046156  T
Q  239 tg 240  Q
    ||    
T  18046155 tg 18046154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 240
Target Start/End: Complemental strand, 33335943 - 33335827
Alignment:
Q  123 ctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttgg 222  Q
    ||||||||||| |||||||| |||| |||||  ||||||||       ||| ||||||||| ||| ||||| || |||||| | ||||||||||||||||    
T  33335943 ctgcaaaattttttgtttttgaaaa-tagtccttgaccccacttttgtgattatttgcatacgtgacacattataactgaatcaattttgtagtttttgg 33335845  T
Q  223 tccctgcaaaatattttg 240  Q
    ||||||||||||||||||    
T  33335844 tccctgcaaaatattttg 33335827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 10409059 - 10409128
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||| |||||||||||||||    
T  10409059 gatgatttgcatacgtgacacattataactaaaccaattttgtagtttttggtctctgcaaaatattttg 10409128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 21125141 - 21125076
Alignment:
Q  175 atttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| ||| ||||| || | |||||| ||||||||||||||||||||||||||||||||||    
T  21125141 atttgcatacgtgacacattataattgaaccaattttgtagtttttggtccctgcaaaatattttg 21125076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 30800719 - 30800654
Alignment:
Q  175 atttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| |||| |||| || |||||||| |||||| |||||||||||||||||||||||||||    
T  30800719 atttgcatacgtggtacattataactgaaccaattttgaagtttttggtccctgcaaaatattttg 30800654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 39379357 - 39379425
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||||    
T  39379357 gatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggt-cctgcaaaatattttg 39379425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 39761535 - 39761480
Alignment:
Q  185 gtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| | ||| |||||| ||||||||||||||||||||||||||||||||||    
T  39761535 gtggcacacgctgattgaacccattttgtagtttttggtccctgcaaaatattttg 39761480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 9179958 - 9179906
Alignment:
Q  25 aataaattagaactactagtatgt--ttataaataaaaggttaaaatatggtt 75  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  9179958 aataaattagaactactagtatgtatttataaataaaaggctaaaatatggtt 9179906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 24782196 - 24782086
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||         ||||||||||||| ||||| ||| ||  ||||||| ||||||||||||||     
T  24782196 cctgcaaaattttttgtttttgaaaa-tagtctctgaccctgctgttgtgatgatttgcatacgtggcgcattatatctgaaccaattttgtagtttttt 24782098  T
Q  222 gtccctgcaaaa 233  Q
    |||||| |||||    
T  24782097 gtccctacaaaa 24782086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 31155541 - 31155508
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||||||||||||||    
T  31155541 attttgtagtttttggtccctgcaaaatattttg 31155508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 4203535 - 4203650
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| || || || | |||||| |||||||| ||||||||    
T  4203535 tgcaaaatttcttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacatattataattgaaccaattttgtaatttttggt 4203633  T
Q  224 ccctgcaaaatattttg 240  Q
    |||| ||| | ||||||    
T  4203634 ccctacaacaaattttg 4203650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 40038624 - 40038663
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  40038624 gatgatttgcacacgtggcacatgatgactgaacctattt 40038663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 20986026 - 20985993
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  20986026 attttgttgtttttggtccctgcaaaatattttg 20985993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 31156069 - 31156102
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| ||||||||||||||||||||||||    
T  31156069 attttgtagattttggtccctgcaaaatattttg 31156102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 5917190 - 5917222
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  5917190 ttttgttgtttttggtccctgcaaaatattttg 5917222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 19565531 - 19565563
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  19565531 ttttgttgtttttggtccctgcaaaatattttg 19565563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 42553944 - 42553912
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  42553944 ttttgttgtttttggtccctgcaaaatattttg 42553912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 19275959 - 19275844
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||||||  |||||||||||| ||||| |||||||||       ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19275959 cctgcaaaattt--tgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacctattttgtagtttttg 19275863  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  19275862 gtccctgcaaaatattttg 19275844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 6468592 - 6468475
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  6468592 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgacacatgatgactgaaccaattttgtagtttttg 6468494  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  6468493 gtccctgcaaaatattttg 6468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 21995144 - 21995262
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||  ||||| ||||||||| |||||||||       ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21995144 cctgcaaattttttttgttttttaaaatagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacctattttgtagtttttg 21995243  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  21995244 gtccctgcaaaatattttg 21995262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 12612276 - 12612161
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| ||||||||||||| ||||||||| | |||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  12612276 tgcaaaattttttgttttttaaaa-tagtctctggctccatttttgtgatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttggt 12612178  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  12612177 ccctgcaaaatattttg 12612161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 2373413 - 2373296
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||| | |||||||||       ||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  2373413 cctgcaaaattttttgttttttaaaa-tagccgctgaccccatttttgtgatgatttgcatacgtgacacatgatgactgaacccattttgtagtttttg 2373315  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  2373314 gtccctgcaaaatattttg 2373296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 7155877 - 7155994
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||| ||||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  7155877 cctgcaaaattttttgtttttgaaaa-tagtttctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 7155975  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  7155976 gtccctgcaaaatattttg 7155994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 24273918 - 24274035
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  24273918 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 24274016  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  24274017 gtccctgcaaaatattttg 24274035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 33131607 - 33131721
Alignment:
Q  125 gcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtc 224  Q
    ||||||||| ||||||||||||| ||||| || |||| |       ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  33131607 gcaaaattttttgttttttaaaa-tagtccctaaccctatttttgtgatgatttgcatacgtgacacatgatgactgaaccgattttgtagtttttggtc 33131705  T
Q  225 cctgcaaaatattttg 240  Q
    ||||||||||||||||    
T  33131706 cctgcaaaatattttg 33131721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 317889 - 318006
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||||||||||||| |||||||||| ||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  317889 cctgcaaatttttttgttttttaaaa-tagtctctgatcccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 317987  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  317988 gtccctgcaaaatattttg 318006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 8680856 - 8680973
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || ||| |||| |||||||||||||||    
T  8680856 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataacttaaccaattttgtagtttttg 8680954  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  8680955 gtccctgcaaaatattttg 8680973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 15076124 - 15076007
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  15076124 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttatgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 15076026  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  15076025 gtccctgcaaaatattttg 15076007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 23770394 - 23770325
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23770394 gatgatttgcatacgtggcacgtgatgactgaacccattttgtagtttttggtccctgcaaaatattttg 23770325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 32885753 - 32885870
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||||||| ||| |       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  32885753 cctgcaaaattttttgtttttgaaaa-tagtctctgcccctacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 32885851  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  32885852 gtccctgcaaaatattttg 32885870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 33801663 - 33801546
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  33801663 cctgcaaatttttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 33801565  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  33801564 gtccctgcaaaatattttg 33801546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 14655674 - 14655574
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  14655674 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 14655575  T
Q  239 t 239  Q
    |    
T  14655574 t 14655574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 2616155 - 2616038
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||| ||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  2616155 cctgcaaaattttttgtttttgaaaa-tagtccctgaccacacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 2616057  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  2616056 gtccctgcaaaatattttg 2616038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 9896511 - 9896442
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  9896511 gatgatttgcatacgtggcatatgatgactgaacccattttgtagtttttggtctctgcaaaatattttg 9896442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 15116752 - 15116869
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||| |||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  15116752 cctgcaaaattttttgtttttgaaaa-tagtccctgtccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 15116850  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  15116851 gtccctgcaaaatattttg 15116869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 17321474 - 17321357
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||| |||| ||||    
T  17321474 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttatagtatttg 17321376  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  17321375 gtccctgcaaaatattttg 17321357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 17321607 - 17321490
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||| |||| ||||    
T  17321607 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttatagtatttg 17321509  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  17321508 gtccctgcaaaatattttg 17321490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 11129283 - 11129398
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| |||||| ||||| |||||||| ||||| ||||||||| |    
T  11129283 tgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcagatgataactgaaccaattttttagtttttgat 11129381  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  11129382 ccctgcaaaatattttg 11129398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 7324102 - 7323996
Alignment:
Q  133 tattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaa 232  Q
    ||||||||||||||| ||||| |||||||||       ||||||||||||| | ||||||| || |||||||| ||||||||||||||| ||||||||||    
T  7324102 tattgttttttaaaa-tagtccctgaccccacttttatgatgatttgcatacggggcacattataactgaaccaattttgtagtttttgatccctgcaaa 7324004  T
Q  233 atattttg 240  Q
    ||||||||    
T  7324003 atattttg 7323996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 777911 - 777842
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||    
T  777911 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttgatccctgcaaaatattttg 777842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 15962156 - 15962225
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||    
T  15962156 gatgatttgcatacgtggcacattataactgaaccaattttttagtttttggtccctgcaaaatattttg 15962225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26375772 - 26375889
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| || ||| ||       ||||||||||||| ||| ||||| || |||||||| |||||||| ||||||    
T  26375772 cctgcaaaattttttgttttttaaaa-tagtccctaacctcacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtaatttttg 26375870  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  26375871 gtccctgcaaaatattttg 26375889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 31166950 - 31167067
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||| ||||||||| ||||||||| || |||||||| |||||||||||||||    
T  31166950 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgattatttgcatacgtggcacattataactgaaccaattttgtagtttttg 31167048  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||  ||||||||||||||    
T  31167049 gtctttgcaaaatattttg 31167067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 240
Target Start/End: Complemental strand, 24692900 - 24692784
Alignment:
Q  123 ctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttgg 222  Q
    ||||||||||| |||||||| |||| ||||| |||||| ||       ||||||||||||| ||||||||| || |||||||  ||||||||||||||||    
T  24692900 ctgcaaaattttttgtttttgaaaa-tagtccctgacctcacttttgtgatgatttgcatacgtggcacattataactgaactaattttgtagtttttgg 24692802  T
Q  223 tccctgcaaaatattttg 240  Q
    || |||||||||||||||    
T  24692801 tctctgcaaaatattttg 24692784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 34582610 - 34582726
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  34582610 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 34582708  T
Q  222 gtccctgcaaaatatttt 239  Q
     |||||| ||||||||||    
T  34582709 atccctgtaaaatatttt 34582726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 494660 - 494565
Alignment:
Q  145 aaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| |||||||||       |||||| |||||| ||||||||| || |||||| | ||||||||||||||||||||||||||||||||||    
T  494660 aaaatagtccctgaccccacttttgtgatgatctgcatacgtggcacattataactgaatcaattttgtagtttttggtccctgcaaaatattttg 494565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 543595 - 543526
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||  |||||||||||||||||||||| |||||||||||    
T  543595 gatgatttgcatacgtggcacattataactgaacaaattttgtagtttttggtccctgtaaaatattttg 543526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 3356421 - 3356304
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||| ||||||| |||||||| |||| |||||||||||||||       | | ||||||||| ||| ||||| || |||||||| ||||||| |||||||    
T  3356421 cctggaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgtttatttgcatacgtgacacattataactgaaccaattttgtcgtttttg 3356323  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  3356322 gtccctgcaaaatattttg 3356304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 6591361 - 6591244
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||  ||||| |||       ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||    
T  6591361 cctgcaaaattttttgttttttaaaa-tagtgcctgactccacttttgtgatgatttgcatacgtgacacattataactaaaccaattttgtagtttttg 6591263  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  6591262 atccctgcaaaatattttg 6591244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 10091114 - 10091231
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||    
T  10091114 cctgcaaaattttttgtttttgaaaa-tagtccatgaccccacttttatgatgatttgcatacgtgacacattataactgaaccaattttatagtttttg 10091212  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  10091213 ttccctgcaaaatattttg 10091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 14428729 - 14428818
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttg 212  Q
    |||||||| ||| ||||||||||||| |||||||||||||||       ||||||||||||| ||||||||||||||||||||| ||||||    
T  14428729 cctgcaaatttttttgttttttaaaa-tagtctctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaaccgattttg 14428818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 22822398 - 22822453
Alignment:
Q  185 gtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  22822398 gtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 22822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 30928963 - 30928848
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || ||| |||| ||||||||||||||| |    
T  30928963 tgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataacttaaccaattttgtagtttttgat 30928865  T
Q  224 ccctgcaaaatattttg 240  Q
    || ||||||||||||||    
T  30928864 ccttgcaaaatattttg 30928848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 5286714 - 5286786
Alignment:
Q  171 gatgatttgcatatgtggc---acatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||||||||   |||| || | |||||| ||||||||||||||||||||||||||||||||||    
T  5286714 gatgatttgcatatgtggcggcacattataaatgaaccaattttgtagtttttggtccctgcaaaatattttg 5286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 1890140 - 1890257
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||| ||       ||| ||||||||| ||| ||||| || || ||||| ||||| |||||||||    
T  1890140 cctgcaaaattttttgtttttgaaaa-tagtccctgacctcacttttgtgataatttgcatacgtgacacattataaccgaaccaattttatagtttttg 1890238  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  1890239 gtccctgcaaaatattttg 1890257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 19296326 - 19296227
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||| ||||||| |||||||| |||| ||||| |||||||||       |||||||| |||||||||||||| || |||||||| |||||||||||||||    
T  19296326 cctggaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttacatatgtggcacattataactgaaccaattttgtagtttttg 19296228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 33808837 - 33808786
Alignment:
Q  189 cacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  33808837 cacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 33808786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 34990187 - 34990118
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||| |  ||||||||||||| |||||  ||||  ||||||||||||||||||||||||||||    
T  34990187 gatgatttgcaaacatggcacatgatgattgaactgatttattagtttttggtccctgcaaaatattttg 34990118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 20582814 - 20582774
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  20582814 tgaacccattttgtagtttttggtccctgcaaaatattttg 20582774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 33746881 - 33746921
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  33746881 tgaacccattttgtagtttttggtccctgcaaaatattttg 33746921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 16368806 - 16368766
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  16368806 tgaacccattttttagtttttggtccctgcaaaatattttg 16368766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 25431672 - 25431736
Alignment:
Q  176 tttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| ||| ||||| || ||| |||| ||||||||||||||||||| |||||||| |||||    
T  25431672 tttgcatacgtgacacattataactaaaccaattttgtagtttttggtccttgcaaaattttttg 25431736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 11448687 - 11448738
Alignment:
Q  189 cacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||| || |||||| | |||||||||||||||||||||| |||||||||||    
T  11448687 cacattataactgaatcaattttgtagtttttggtccctgtaaaatattttg 11448738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 16766458 - 16766497
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  16766458 tgaacctattttgcagtttttggtcccagcaaaatatttt 16766497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 23502306 - 23502345
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  23502306 gatgatttgcacatgtggcacatgatgactgaacccattt 23502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 6851416 - 6851453
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatatt 237  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  6851416 tgaacccattttgtagtatttggtccctgcaaaatatt 6851453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 21385521 - 21385488
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  21385521 attttgttgtttttggtccctgcaaaatattttg 21385488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 6412282 - 6412314
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  6412282 ttttgttgtttttggtccctgcaaaatattttg 6412314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 24649430 - 24649552
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  24649430 cctgcaaaattttttgttttttaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 24649528  T
Q  222 gtccctgcaaaatattttggttta 245  Q
    ||||||||||||||||||| ||||    
T  24649529 gtccctgcaaaatattttgtttta 24649552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 48609519 - 48609398
Alignment:
Q  117 ttggtcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagt 216  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||       ||||||||||||| |||||||||||||||| |||| ||||||||||    
T  48609519 ttggtcctacaaaattt-ttgttttt-aaaaatagtctctgaccccatttttgtgatgatttgcatacgtggcacatgatgactaaacccattttgtagt 48609422  T
Q  217 ttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||||    
T  48609421 ttttggtccctgcaaaatattttg 48609398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 33379967 - 33380084
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  33379967 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgaccgaaccaattttgtagtttttg 33380065  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  33380066 gtccctgcaaaatattttg 33380084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 22919764 - 22919879
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  22919764 tgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttggt 22919862  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  22919863 ccctgcaaaatattttg 22919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 26191440 - 26191555
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26191440 tgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttggt 26191538  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  26191539 ccctgcaaaatattttg 26191555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 45290540 - 45290654
Alignment:
Q  125 gcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtc 224  Q
    ||||||||| ||||||||||||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||    
T  45290540 gcaaaattttttgttttttaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtc 45290638  T
Q  225 cctgcaaaatattttg 240  Q
    ||||||||||||||||    
T  45290639 cctgcaaaatattttg 45290654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 46868310 - 46868424
Alignment:
Q  125 gcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtc 224  Q
    ||||| ||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  46868310 gcaaatttttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgacacatgatgactgaacccattttgtagtttttggtc 46868408  T
Q  225 cctgcaaaatattttg 240  Q
    ||||||||||||||||    
T  46868409 cctgcaaaatattttg 46868424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 18473352 - 18473469
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  18473352 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 18473450  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  18473451 gtccctgcaaaatattttg 18473469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 48955985 - 48955868
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  48955985 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 48955887  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||| |||||||||||||    
T  48955886 gtcccagcaaaatattttg 48955868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 52254261 - 52254378
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| || |||||||||| ||||| |||||||||        |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  52254261 cctgcaaatttttttattttttaaaa-tagtccctgaccccatttttattatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttg 52254359  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  52254360 gtccctgcaaaatattttg 52254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 2733265 - 2733381
Alignment:
Q  123 ctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttgg 222  Q
    ||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||    
T  2733265 ctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttgg 2733363  T
Q  223 tccctgcaaaatattttg 240  Q
    ||||||||||||||||||    
T  2733364 tccctgcaaaatattttg 2733381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 34808274 - 34808390
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||||||||||||| |||||  ||||||||       ||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  34808274 cctgcaaatttttttgttttttaaaa-tagtcaatgaccccatttttgtgatgatttgcatacgtggcacataatgactgaacccattttgtagtttttg 34808372  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  34808373 gtccctgcaaaatatttt 34808390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 11822085 - 11822200
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||  |||||||||||||||       ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |    
T  11822085 tgcaaaattttttgtttttgaaag-tagtctctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttgat 11822183  T
Q  224 ccctgcaaaatattttg 240  Q
    || ||||||||||||||    
T  11822184 ccttgcaaaatattttg 11822200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 13770571 - 13770686
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||    
T  13770571 tgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgacgactgaacccattttgtagtttttagt 13770669  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  13770670 ccctgcaaaatattttg 13770686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 18302301 - 18302186
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||| | ||||||||||||| ||||||||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||||    
T  18302301 tgcaaaatattttgttttttaaaa-tagtctctgactccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggt 18302203  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  18302202 ccctgcaaaatattttg 18302186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 20756101 - 20756216
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| ||||||| |       ||||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  20756101 tgcaaaattttttgtttttgaaaa-tagtccctgaccctatttttgtgatgatttgcatacgtggcacatgatgattgaacccattttgtagtttttggt 20756199  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  20756200 ccctgcaaaatattttg 20756216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 18900054 - 18899950
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||  ||||||||| |||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  18900054 cctgcaaaattttttgttttt--aaaatagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttg 18899957  T
Q  222 gtccctg 228  Q
    |||||||    
T  18899956 gtccctg 18899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 1811143 - 1811074
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1811143 gatgatttgcatacgtgacacatgatgactgaacccattttgtagtttttggtccctgcaaaatattttg 1811074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 10552233 - 10552116
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||| ||||||||||       ||||||||||||| ||||||||| || ||| |||| |||||||||||||||    
T  10552233 cctgcaaaattttttgtttttgaaaa-tagtttctgaccccacttttgtgatgatttgcatacgtggcacattataacttaaccaattttgtagtttttg 10552135  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  10552134 gtccctgcaaaatattttg 10552116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 12361091 - 12361208
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||| | |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  12361091 cctgcaaaattttttgtttatgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 12361189  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  12361190 gtccctgcaaaatattttg 12361208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 16083132 - 16083244
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| ||| |||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  16083132 cctgcaaaattttttgttttttaaaa-tagtccctggccccatttttgtgatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttg 16083230  T
Q  222 gtccctgcaaaatat 236  Q
    || ||||||||||||    
T  16083231 gt-cctgcaaaatat 16083244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 21383182 - 21383299
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| || ||||||       ||| ||||||||||||||||||| || |||||||| |||||||||||||||    
T  21383182 cctgcaaaattttttgtttttgaaaa-tagtccctaaccccacttttgtgattatttgcatatgtggcacattataactgaaccaattttgtagtttttg 21383280  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  21383281 gtccctgcaaaatattttg 21383299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 32454210 - 32454093
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  32454210 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttatgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 32454112  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  32454111 gtccctgcaaaatattttg 32454093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 39303868 - 39303799
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  39303868 gatgatttgcatacgtggcacatgatgactgaatccattttgtagtttttggtccctgcaaaatattttg 39303799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 41881174 - 41881291
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || |||||||| |||| ||||| |||||||||       ||||||||||||||||||||||| || ||| |||| |||||||||||||||    
T  41881174 cctgcaaaaatttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatatgtggcacattataacttaaccaattttgtagtttttg 41881272  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  41881273 gtccctgcaaaatattttg 41881291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 29072578 - 29072694
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||| ||||| |||||||| |||||||| ||| |||||||| ||||||    
T  29072578 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgattcgcatacgtggcacaagatgactggacccattttgtaatttttg 29072676  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  29072677 gtccctgcaaaatatttt 29072694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 32728969 - 32728853
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  32728969 cctgcaaaattttttgtttttgaaaa-tagtccatgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 32728871  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  32728870 gtccctgcaaaatatttt 32728853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 7001816 - 7001698
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || ||| |||| |||||||||||||||    
T  7001816 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataacttaaccaattttgtagtttttg 7001718  T
Q  222 gtccctgcaaaatattttgg 241  Q
    ||||||||||||| ||||||    
T  7001717 gtccctgcaaaattttttgg 7001698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 37545870 - 37545755
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||||||  |||||||||||| ||||| | |||||||       ||| ||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  37545870 cctgcaaaattt--tgttttttaaaa-tagtccccgaccccatttttgtgataatttgcatacgtgccacatgatgactgaacccattttgtagtttttg 37545774  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  37545773 gtccctgcaaaatattttg 37545755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 4323909 - 4324026
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||| ||| ||||||||| || |||||||| ||||| |||||||||    
T  4323909 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgtatacgtggcacattataactgaaccaattttatagtttttg 4324007  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  4324008 gtccctgcaaaatattttg 4324026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 19622736 - 19622853
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  19622736 cctgcaaaattttttgtttttgaaaa-tagtccatgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 19622834  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  19622835 gtccctgcaaaatattttg 19622853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 26442772 - 26442703
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  26442772 gatgatttgcatatgtgacacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 26442703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 29688352 - 29688235
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||| || ||||||||  |||| |||||||||    
T  29688352 cctgcaaaattttttgttttttaaaa-tagtcactgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccatttttttagtttttg 29688254  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  29688253 ttccctgcaaaatattttg 29688235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 32626813 - 32626696
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       |||||||| |||| ||||||||  || |||||||| |||||||||||||||    
T  32626813 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttacatacgtggcacaatataactgaaccaattttgtagtttttg 32626715  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  32626714 gtccctgcaaaatattttg 32626696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 35005513 - 35005582
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  35005513 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 35005582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 31258420 - 31258536
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||    
T  31258420 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttatagtttttg 31258518  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  31258519 gtccctgcaaaatatttt 31258536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 3753290 - 3753408
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctatttt-gtagttttt 220  Q
    |||||||||||| ||||||||||||| | |||  ||||||||       ||||||||||||| ||||  ||||||||||||||| ||||| |||||||||    
T  3753290 cctgcaaaattttttgttttttaaaa-tggtccttgaccccatttttgtgatgatttgcatacgtggtgcatgatgactgaacccatttttgtagttttt 3753388  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  3753389 ggtccctgcaaaatattttg 3753408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 7818974 - 7818905
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||    
T  7818974 gatgatttgcatacgtggcacattataactgaaccaattttatagtttttggtccctgcaaaatattttg 7818905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 13260114 - 13260183
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  13260114 gatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 13260183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 14007567 - 14007684
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| | |||||| |||| ||||| |||||||||       ||||||||| ||| ||||||||| || |||||| | |||||||||||||||    
T  14007567 cctgcaaaatttttagtttttgaaaa-tagtccctgaccccacttttgtgatgatttgtatacgtggcacattataactgaatcaattttgtagtttttg 14007665  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  14007666 gtccctgcaaaatattttg 14007684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 17984568 - 17984499
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  17984568 gatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 17984499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 35307982 - 35307913
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||    
T  35307982 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccttgcaaaatattttg 35307913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 41358583 - 41358466
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||| |||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||| |     
T  41358583 cctgcaaaattttttggttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttcta 41358485  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  41358484 gtccctgcaaaatattttg 41358466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 49226364 - 49226433
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| |||||||||||||||||| |||||||||||||||    
T  49226364 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtctctgcaaaatattttg 49226433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 21391250 - 21391182
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    ||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  21391250 gatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtccctgcaaaatatttt 21391182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 26062085 - 26062154
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||| | |||||||||||||||||||||||||||| |||||    
T  26062085 gatgatttgcatacgtggcacattataactgaatcaattttgtagtttttggtccctgcaaaattttttg 26062154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 3679720 - 3679821
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||||||||  |||||    
T  3679720 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtccctgcaaggtattt 3679819  T
Q  239 tg 240  Q
    ||    
T  3679820 tg 3679821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 27521654 - 27521774
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgac--tgaacctattttgtagttt 218  Q
    ||||||||||||| ||||||||  ||||||||| |||| | ||       ||||||||||||| |||||||||||||||  |||||| ||||||||||||    
T  27521654 tcctgcaaaattttttgttttt--aaaatagtccctgatctcatttttgtgatgatttgcatacgtggcacatgatgacagtgaacccattttgtagttt 27521751  T
Q  219 ttggtccct-gcaaaatattttg 240  Q
    |||||||||  ||||||||||||    
T  27521752 ttggtccctcccaaaatattttg 27521774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 34383028 - 34383143
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||    
T  34383028 tgcaaaattttttgtttttgaaaa-tagtcattgaccccacttttgtgatgatttgcatacgtgacacattataacttaaccaattttgtagtttttggt 34383126  T
Q  224 ccctgcaaaatattttg 240  Q
    ||||||||||| |||||    
T  34383127 ccctgcaaaattttttg 34383143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 1159760 - 1159654
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || |||||||| |||| ||||| |||||||||       ||||||||||||||||||||| | || |||||||| |||||||||||||||    
T  1159760 cctgcaaaaatttttgtttttgaaaa-tagtccctgaccccacttttatgatgatttgcatatgtggcacgttataactgaaccaattttgtagtttttg 1159662  T
Q  222 gtccctgc 229  Q
     |||||||    
T  1159661 atccctgc 1159654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 45368771 - 45368655
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || | ||||||||||| ||||| |||||||||       ||||||||||||||||| |||| |||||||||||  ||||||||||||||     
T  45368771 cctgcaaaaattttcgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatatgtgtcacacgatgactgaactgattttgtagttttt- 45368674  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||| ||||||||||||||    
T  45368673 atccttgcaaaatattttg 45368655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 50429130 - 50429013
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    ||||||||||||| |||||||| |||| ||||| |||||||||       |||||||||| || ||| ||||| || ||||||||   ||||||||||||    
T  50429130 tcctgcaaaattttttgtttttgaaaa-tagtccctgaccccactttgt-gatgatttgcttacgtgacacattataactgaaccagctttgtagttttt 50429033  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  50429032 ggtccctgcaaaatattttg 50429013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 15335214 - 15335093
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgt----agtt 217  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||    ||||    
T  15335214 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtttgtagtt 15335116  T
Q  218 tttggtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||||||    
T  15335115 tttgatccctgcaaaatattttg 15335093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 33067635 - 33067559
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||    
T  33067635 ttttttaaaatagtccctgaccccacctttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtag 33067559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 4360398 - 4360462
Alignment:
Q  173 tgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatt 237  Q
    ||||||||||| ||||| ||| || |||||||| ||||| |||||||||||||| ||||||||||    
T  4360398 tgatttgcatacgtggcgcattataactgaaccaattttatagtttttggtccccgcaaaatatt 4360462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 52331613 - 52331573
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  52331613 tgaacccattttgtagtttttggtccctgcaaaatattttg 52331573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 24510071 - 24510110
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24510071 gatgatttgcagatgtggcacatgatgactgaacctattt 24510110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 7709908 - 7709868
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  7709908 tgaacccattttgtagtttttgatccctgcaaaatattttg 7709868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 18079528 - 18079572
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||    
T  18079528 gatgatttgcacacgtggcacatgatgactgaacccattttgtag 18079572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 34492435 - 34492395
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  34492435 tgaacccattttgtagtttttggtccctacaaaatattttg 34492395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 48730489 - 48730445
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||    
T  48730489 gatgatttgcacacgtgacacatgatgactgaacctattttgtag 48730445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 5058854 - 5058888
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacc 205  Q
    ||||||||||| |||||||||||||||||||||||    
T  5058854 gatgatttgcacatgtggcacatgatgactgaacc 5058888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 41738926 - 41738964
Alignment:
Q  172 atgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  41738926 atgatttgcacacgtggcacatgatgactgaacctattt 41738964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 22953429 - 22953360
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| |||| ||| || || || ||| |||| |||||||||||||| ||||| |||||||||||||    
T  22953429 gatgatttacatacgtgacatattataacttaaccaattttgtagtttttagtcccagcaaaatattttg 22953360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 24507780 - 24507747
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  24507780 attttgttgtttttggtccctgcaaaatattttg 24507747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 31060850 - 31060883
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  31060850 attttgttgtttttggtccctgcaaaatattttg 31060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 38164232 - 38164199
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  38164232 attttgttgtttttggtccctgcaaaatattttg 38164199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 990183 - 990256
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttg 212  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||||    
T  990183 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttg 990256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 12360904 - 12360872
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  12360904 ttttgttgtttttggtccctgcaaaatattttg 12360872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 15526298 - 15526266
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  15526298 ttttgttgtttttggtccctgcaaaatattttg 15526266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 30322993 - 30323025
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  30322993 ttttgttgtttttggtccctgcaaaatattttg 30323025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 35056594 - 35056626
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  35056594 ttttgttgtttttggtccctgcaaaatattttg 35056626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 40718174 - 40718206
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  40718174 ttttgttgtttttggtccctgcaaaatattttg 40718206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 49923695 - 49923659
Alignment:
Q  174 gatttgcatatgtggcacatgatgactgaacctattt 210  Q
    |||||||| |||| |||||||||||||||||||||||    
T  49923695 gatttgcacatgtagcacatgatgactgaacctattt 49923659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 366196 - 366079
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| | |||||||       ||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  366196 cctgcaaaattttttgttttttaaaa-tagtccccgaccccatttttgtgatgatttgtatacgtggcacatgatgactgaacctattttgtagtttttg 366098  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  366097 gtccctgcaaaatattttg 366079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 10358083 - 10358200
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  10358083 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaaccaattttgtagtttttg 10358181  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  10358182 atccctgcaaaatattttg 10358200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 13769854 - 13769968
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| ||||||||||||| ||||| ||||||| |       ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13769854 tgcaaaattttttgttttttaaaa-tagtc-ctgaccctatttttgtgatgatttgcatacgtggcacatgatgactgaacctattttgtagtttttggt 13769951  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  13769952 ccctgcaaaatattttg 13769968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 31310601 - 31310482
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    |||| |||||||| ||||||||| ||||||||| |||||||||       ||||||||||||| ||||||||| ||||||||| | ||||||||||||||    
T  31310601 tccttcaaaattttttgtttttttaaaatagtccctgaccccatttttgtgatgatttgcatacgtggcacattatgactgaatccattttgtagttttt 31310502  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  31310501 ggtccctgcaaaatattttg 31310482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 244
Target Start/End: Complemental strand, 5308607 - 5308486
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  5308607 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 5308509  T
Q  222 gtccctgcaaaatattttggttt 244  Q
    |||||||||||||||||||||||    
T  5308508 gtccctgcaaaatattttggttt 5308486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 23816955 - 23816842
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| |||||||||||||||       ||||||||| ||| |||||||||||||||| |||| |||||||||||||||    
T  23816955 cctgcaaaattttttgttttttaaaa-tagtctctgaccccatttttgtgatgatttgtatacgtggcacatgatgactaaaccgattttgtagtttttg 23816857  T
Q  222 gtccctgcaaaatat 236  Q
    |||||||||||||||    
T  23816856 gtccctgcaaaatat 23816842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 48358997 - 48358884
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  48358997 cctgcaaaattttttgttttttaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 48358899  T
Q  222 gtccctgcaaaatat 236  Q
    |||||||||||||||    
T  48358898 gtccctgcaaaatat 48358884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 19757846 - 19757947
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19757846 tttttgaaaatagtcactgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttggtccctgcaaaatattt 19757945  T
Q  239 tg 240  Q
    ||    
T  19757946 tg 19757947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 31732372 - 31732254
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    ||||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  31732372 tcctgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagttttt 31732274  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  31732273 ggtccctgcaaaatattttg 31732254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 46648495 - 46648609
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| ||||||||| ||||||||| |||||||||       |||||||||| || ||||||||||||||||||||| |||||||||||||| ||    
T  46648495 tgcaaaattttttgtttttttaaaatagtc-ctgaccccatttttgtgatgatttgcgtacgtggcacatgatgactgaacccattttgtagtttttagt 46648593  T
Q  224 ccctgcaaaatatttt 239  Q
    ||||||||||||||||    
T  46648594 ccctgcaaaatatttt 46648609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 488793 - 488910
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  488793 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 488891  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  488892 gtccctgcaaaatattttg 488910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 18311660 - 18311777
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| |||||||| ||||||||||||||||||||       ||||||||||||| ||||||||| || | |||||| |||||||||||||||    
T  18311660 cctgcaaatttttttgttttt-aaaaatagtctctgaccccacttttgtgatgatttgcatacgtggcacattataattgaaccaattttgtagtttttg 18311758  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  18311759 gtccctgcaaaatattttg 18311777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 19465746 - 19465815
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19465746 gatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttggtccctgcaaaatattttg 19465815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 45021576 - 45021693
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  45021576 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 45021674  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  45021675 gtccctgcaaaatattttg 45021693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 45073562 - 45073445
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || |||||||| |||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  45073562 cctgcaaaaatttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 45073464  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  45073463 gtccctgcaaaatattttg 45073445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 1007149 - 1007032
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  1007149 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 1007051  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  1007050 atccctgcaaaatattttg 1007032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 6108617 - 6108500
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  6108617 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 6108519  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  6108518 gtccctgcaaaattttttg 6108500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 17999644 - 17999527
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||| ||||||||| ||||||||| || |||||||| |||||||||||||||    
T  17999644 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacgtttgtgataatttgcatacgtggcacattataactgaaccaattttgtagtttttg 17999546  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  17999545 gtccctgcaaaatattttg 17999527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 20388354 - 20388471
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||| |||||||| ||||  |||||||||       ||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  20388354 cctgcaaaattttttgtcttttaaaa-tagttcctgaccccatttttgtgatgatttgcatacgtggcatatgatgactgaaccgattttgtagtttttg 20388452  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  20388453 gtccttgcaaaatattttg 20388471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 21554673 - 21554556
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       |||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  21554673 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgttttgcatatgtggcacattataactgaaccaattttgtagtttttg 21554575  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  21554574 atccctgcaaaatattttg 21554556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 28911658 - 28911775
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  28911658 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaacccattttgtagtttttg 28911756  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  28911757 gtccctgcaaaatattttg 28911775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 32189267 - 32189198
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  32189267 gatgatttgcatatatggcacatgatgattgaacccattttgtagtttttggtccctgcaaaatattttg 32189198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 43300737 - 43300802
Alignment:
Q  172 atgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatt 237  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43300737 atgatttgcatacgtggcacatgatgactgaacctattgtgtagtttttggtccctgcaaaatatt 43300802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 46304302 - 46304185
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  46304302 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 46304204  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||| || ||||||||||||    
T  46304203 gtctctacaaaatattttg 46304185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 39719450 - 39719551
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  39719450 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 39719549  T
Q  239 tg 240  Q
    ||    
T  39719550 tg 39719551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 7432032 - 7432142
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  7432032 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 7432130  T
Q  222 gtccctgcaaaa 233  Q
    ||||||||||||    
T  7432131 gtccctgcaaaa 7432142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 21223486 - 21223604
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    |||| |||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  21223486 tcctacaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagttttt 21223584  T
Q  221 ggtccctgcaaaatattttg 240  Q
    |||||||| |||| ||||||    
T  21223585 ggtccctgtaaaagattttg 21223604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 12894274 - 12894205
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  12894274 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 12894205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 18022446 - 18022563
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| || |||||||||| || || |||||||||       ||| ||||||||| ||||||||| || |||||||| |||||||||||||||    
T  18022446 cctgcaaaattttttattttttaaaa-taatccctgaccccacttttgtgattatttgcatacgtggcacattataactgaaccaattttgtagtttttg 18022544  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  18022545 gtccctgcaaaatattttg 18022563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 19561228 - 19561341
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  19561228 cctgcaaaattttttgtttttgaaaa-tagtccctgacaccacttttgtgatgatttgcatatgtggcacattataactgaaccaattttgtagtttttg 19561326  T
Q  222 gtccctgcaaaatat 236  Q
    ||||||| |||||||    
T  19561327 gtccctgtaaaatat 19561341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 35015139 - 35015022
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||  |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  35015139 cctgcaaaattttttgtttttgaaaa-tagttcctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 35015041  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  35015040 gtccctgcaaaattttttg 35015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 37372825 - 37372708
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| |||  |||| || |||||||| |||||||||||||||    
T  37372825 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgatacattataactgaaccaattttgtagtttttg 37372727  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  37372726 gtccctgcaaaatattttg 37372708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 44508799 - 44508916
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || |||||||| |||| |||||||||||||||        |||||||||||| ||||||||| || | |||||| |||||||||||||||    
T  44508799 cctgcaaaaatttttgtttttgaaaa-tagtctctgaccccacttttgttatgatttgcatacgtggcacattataagtgaaccaattttgtagtttttg 44508897  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  44508898 gtccctgcaaaatattttg 44508916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 44344711 - 44344589
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || |||||||| |||| ||||| |||||||||       |||||||| |||| ||||||||| || |||||||| ||||| |||||||||    
T  44344711 cctgcaaaaatttttgtttttgaaaa-tagtcactgaccccacttttgtgatgattttcatacgtggcacattataactgaaccaattttatagtttttg 44344613  T
Q  222 gtccctgcaaaatattttggttta 245  Q
    ||||||||||||||||||| ||||    
T  44344612 gtccctgcaaaatattttgtttta 44344589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 19783943 - 19784012
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||    
T  19783943 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggttcctgcaaaatattttg 19784012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 30352641 - 30352758
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  30352641 cctgcaaaattttttgtttttgaaaa-tagtccctgactccatttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 30352739  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| | ||||||||||||    
T  30352740 gtcctttcaaaatattttg 30352758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 44403150 - 44403057
Alignment:
Q  145 aaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    |||||||||||||||||||       ||||||||||||| ||||||| | || |||||||| |||||||||||||||||||||| |||||||||    
T  44403150 aaaatagtctctgaccccacttttgtgatgatttgcatacgtggcacgttataactgaaccaattttgtagtttttggtccctgtaaaatattt 44403057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 1559624 - 1559509
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| || ||||||||    
T  1559624 tgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttataatttttggt 1559526  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  1559525 ccctgcaaaatattttg 1559509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 14738681 - 14738796
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| |||||||| ||||||       ||||||||||||| ||||||||| || |||||||| |||||||| |||||| |    
T  14738681 tgcaaaattttttgtttttgaaaa-tagtctctaaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtaatttttgat 14738779  T
Q  224 ccctgcaaaatattttg 240  Q
     ||||||||||||||||    
T  14738780 gcctgcaaaatattttg 14738796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 35210384 - 35210315
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| |||||| ||||||||| || |||||| | ||||||||||||||||||||||||||||||||||    
T  35210384 gatgatgtgcatacgtggcacattataactgaatcaattttgtagtttttggtccctgcaaaatattttg 35210315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 41365088 - 41365020
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||  |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  41365088 gatgatttgcatacatggcacatgatgactgaacccattttgtag-ttttggtccctgcaaaattttttg 41365020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 24954069 - 24953979
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    |||||||| | ||||||||||||| |||||| ||||| ||       ||||||||||||||||||||||| |||||||||||||||||||||    
T  24954069 tgcaaaatattttgttttttaaaa-tagtctttgacctcacttttatgatgatttgcatatgtggcacataatgactgaacctattttgtag 24953979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 1974198 - 1974129
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| || || || |||||||| ||||| ||||||||||||||||||||||||||||    
T  1974198 gatgatttgcatacgtgacaaattataactgaaccaattttttagtttttggtccctgcaaaatattttg 1974129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 30709404 - 30709525
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttg----tagtt 217  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||    |||||    
T  30709404 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtttgtagtt 30709502  T
Q  218 tttggtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||||||    
T  30709503 tttgatccctgcaaaatattttg 30709525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 45671340 - 45671408
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    ||||||||||||| ||| ||||||||||||||||  |||||||||||||| |||| || ||||||||||    
T  45671340 gatgatttgcatacgtgacacatgatgactgaactcattttgtagttttttgtccttgtaaaatatttt 45671408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 39833032 - 39833101
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || ||| |||| |||| ||||||||| |||||||||||||||||||    
T  39833032 gatgatttgcatacgtgacacattataactaaaccaatttngtagtttttagtccctgcaaaatattttg 39833101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 17854291 - 17854240
Alignment:
Q  189 cacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| ||||||| ||||||||||||||| |||||| |||||||||||    
T  17854291 cacatgatggctgaacccattttgtagtttttgatccctgaaaaatattttg 17854240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 43058869 - 43058907
Alignment:
Q  202 aacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  43058869 aaccaattttgtagtttttggtccctgcaaaatattttg 43058907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 24825766 - 24825726
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  24825766 tgaacccattttgtagtttttggtccctacaaaatattttg 24825726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 32792989 - 32792949
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  32792989 tgaacccactttgtagtttttggtccctgcaaaatattttg 32792949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 41054047 - 41054008
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  41054047 gatgatttgcacatgtggcacatgatgactgaacccattt 41054008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 6509276 - 6509306
Alignment:
Q  210 ttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||||||||||||||||||||    
T  6509276 ttgtagtttttggtccctgcaaaatattttg 6509306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 11324247 - 11324214
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||||||||||| |||||||||||    
T  11324247 attttgtagtttttggtccctgtaaaatattttg 11324214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 25092485 - 25092452
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  25092485 attttgttgtttttggtccctgcaaaatattttg 25092452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 29198599 - 29198566
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  29198599 attttgttgtttttggtccctgcaaaatattttg 29198566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 8144359 - 8144391
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  8144359 ttttgttgtttttggtccctgcaaaatattttg 8144391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 25547409 - 25547329
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacc 205  Q
    |||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || ||||||||    
T  25547409 tgcaaaattttttgtttttgaaaa-tagtctctgaccccatttttgtgatgatttgcatacgtgacacattataactgaacc 25547329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 25988449 - 25988481
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  25988449 ttttgttgtttttggtccctgcaaaatattttg 25988481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 31503484 - 31503516
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  31503484 ttttgttgtttttggtccctgcaaaatattttg 31503516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 35469944 - 35469976
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  35469944 ttttgttgtttttggtccctgcaaaatattttg 35469976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 38186633 - 38186589
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||||||||| | ||| ||||||||||||||||| |||||||||    
T  38186633 gatgatttgcacacgtgacacatgatgactgaacccattttgtag 38186589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 44568626 - 44568594
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  44568626 ttttgttgtttttggtccctgcaaaatattttg 44568594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 46829008 - 46829040
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  46829008 ttttgttgtttttggtccctgcaaaatattttg 46829040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 2180493 - 2180376
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  2180493 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgagacatgatgactgaacctattttgtagtttttg 2180395  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  2180394 gtccctgcaaaatattttg 2180376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 22099829 - 22099715
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| ||||||||||||| |||||||||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  22099829 tgcaaaattttttgttttttaaaa-tagtctctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttggt 22099731  T
Q  224 ccctgcaaaatatttt 239  Q
    | || |||||||||||    
T  22099730 ctctacaaaatatttt 22099715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 45593306 - 45593422
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  45593306 cctgcaaaaatttttgttttttaaaa-tagtccctgaccccattttgt-gatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttg 45593403  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  45593404 gtccctgcaaaatattttg 45593422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 32365174 - 32365291
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| ||| |||||       ||||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  32365174 cctgcaaaattttttgttttttaaaa-tagtccctggccccatttttgtgatgatttgcatacgtggcacatgatggctgaaccgattttgtagtttttg 32365272  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||| ||||||||    
T  32365273 gtccctgcaacatattttg 32365291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 51545874 - 51545773
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||||||||||||| |||| ||||       ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  51545874 tttttaaaaatagtccctgatcccatttttgtgatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttggtccttgcaaaatattt 51545775  T
Q  239 tg 240  Q
    ||    
T  51545774 tg 51545773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 6827793 - 6827676
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  6827793 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 6827695  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  6827694 gtccctgcaaaatattttg 6827676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 45505812 - 45505695
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||||||||||||  ||||| |||||||||       ||||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  45505812 cctgcaaatttttttgttttttaaat-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttatagtttttg 45505714  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  45505713 gtccctgcaaaattttttg 45505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 50714485 - 50714368
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  50714485 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 50714387  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  50714386 gtccctgcaaaattttttg 50714368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 52441840 - 52441957
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| |||||| ||||||||       ||||||||||||| ||| ||| ||||||||||||| |||||||||||||||    
T  52441840 cctgcaaaattttttgttttttaaaa-tagtctttgaccccatttttgtgatgatttgcatacgtgacacgtgatgactgaacccattttgtagtttttg 52441938  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| || |||||||||||    
T  52441939 gtccttgtaaaatattttg 52441957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 11285582 - 11285700
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||       |||||||||||||  ||||| | |||||||| | | ||||||||||||||    
T  11285582 tcctgtaaaattttttgttttttaaaa-tagtctctgaccccatttttgtgatgatttgcatacatggcataagatgactggatccattttgtagttttt 11285680  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  11285681 ggtccctgcaaaatattttg 11285700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 36702080 - 36702190
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  36702080 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattatgactgaaccaattttgtagtttttg 36702178  T
Q  222 gtccctgcaaaa 233  Q
    ||||||| ||||    
T  36702179 gtccctggaaaa 36702190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 4279206 - 4279137
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  4279206 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 4279137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 13479350 - 13479467
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||| ||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  13479350 cctgtaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 13479448  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  13479449 gtccctgcaaaatattttg 13479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 35415380 - 35415497
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  35415380 cctgcaaaattttttgtttttgaaaa-tagtccctgactccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 35415478  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  35415479 atccctgcaaaatattttg 35415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 41346138 - 41346022
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  41346138 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 41346040  T
Q  222 gtccctgcaaaatattttg 240  Q
    || ||||||||||||||||    
T  41346039 gt-cctgcaaaatattttg 41346022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 41921004 - 41920887
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||||| |       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  41921004 cctgcaaaattttttgtttttgaaaa-tagtccctgaccctacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 41920906  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  41920905 gtccctgcaaaatattttg 41920887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 51708947 - 51708830
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  51708947 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 51708849  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  51708848 gtccctgcaaaatattttg 51708830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 52017789 - 52017672
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  52017789 cctgcaaaattttttgtttttgaaaa-tagtccctgacaccacttttgcgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 52017691  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  52017690 gtccttgcaaaatattttg 52017672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 34355046 - 34355158
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| ||| |||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||||    
T  34355046 tgcaaaattttttgtttttgaaaa-tagtccctggccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggt 34355144  T
Q  224 ccctgcaaaatatt 237  Q
    ||||||||||||||    
T  34355145 ccctgcaaaatatt 34355158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 27008325 - 27008210
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||    
T  27008325 tgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactaaaccaattttgtagtttttggt 27008227  T
Q  224 ccctgcaaaatattttg 240  Q
    |||| ||||||||||||    
T  27008226 cccttcaaaatattttg 27008210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 55482391 - 55482273
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    ||||| ||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || | |||||| ||||||||||||||    
T  55482391 tcctgtaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataattgaaccaattttgtagttttt 55482293  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||    
T  55482292 ggtccctacaaaatattttg 55482273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 16712565 - 16712496
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||| || ||| |||| ||||||||||||||||||||| ||||||||||||    
T  16712565 gatgatttgcatatgtggcacattataacttaaccaattttgtagtttttggtccctacaaaatattttg 16712496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 24474882 - 24474765
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||| ||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||| |    
T  24474882 cctgtaaaattttttgtttttgaaaa-tagtccctgaccccacttttctgatgatttgcatacgtgacacattataactgaaccaattttgtagttttgg 24474784  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  24474783 gtccctgcaaaatattttg 24474765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 27427923 - 27428040
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||| | |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||  || ||| |||| |||||||||||||||    
T  27427923 cctgcaaaatattttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacaatataactaaaccaattttgtagtttttg 27428021  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  27428022 gtccctgcaaaatattttg 27428040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 29463833 - 29463716
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || | |||||| ||||||||||||||     
T  29463833 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgacacattataattgaaccaattttgtagtttttt 29463735  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  29463734 gtccctgcaaaatattttg 29463716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 38054625 - 38054742
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| ||| ||||| || |||||| | |||||||||||||||    
T  38054625 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccacttttgtgatgatttgcatacgtgacacattataactgaatcaattttgtagtttttg 38054723  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  38054724 gtccctgcaaaatattttg 38054742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 41620175 - 41620058
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||| ||||||||    
T  41620175 cctgcaaaattttttgtttttgaaaa-tagtccctgactccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttggagtttttg 41620077  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  41620076 atccctgcaaaatattttg 41620058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 50822170 - 50822101
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||    
T  50822170 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttgatccctgcaaaatattttg 50822101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 34362017 - 34361949
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    ||||||||||||| ||||||||| || |||||||| |||||||||||||||||||| ||||||||||||    
T  34362017 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtcccggcaaaatatttt 34361949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 55072486 - 55072587
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||||||||||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| ||||| ||||||||||||| ||||||||||||    
T  55072486 tttttaaaaatagtccctgacaccacttttgcgatgatttgcatacgtggcacattataactgaaccaattttatagtttttggtccttgcaaaatattt 55072585  T
Q  239 tg 240  Q
    ||    
T  55072586 tg 55072587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 43368544 - 43368662
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctatttt-gtagttttt 220  Q
    |||||||| ||| ||||||||||||| |||||  ||||||||       ||||||||||||| ||||||||| |||| |||||| ||||| |||||||||    
T  43368544 cctgcaaatttttttgttttttaaaa-tagtcgttgaccccatttttatgatgatttgcatacgtggcacataatgaatgaacccatttttgtagttttt 43368642  T
Q  221 ggtccctgcaaaatattttg 240  Q
    |||| |||||||||||||||    
T  43368643 ggtctctgcaaaatattttg 43368662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 46087839 - 46087954
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| |||  |||| || |||||||| |||||||||||||||    
T  46087839 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccatttttgtgatgatttgcatacgtg--acattataactgaaccaattttgtagtttttg 46087935  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  46087936 gtccctgcaaaatattttg 46087954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 9446244 - 9446127
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| |||  |||| || ||  |||| |||||||||||||||    
T  9446244 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgaaacattataacaaaaccaattttgtagtttttg 9446146  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  9446145 gtccctgcaaaatattttg 9446127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 22584530 - 22584413
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       |||||||||||||  || ||||| || |||||||| |||||||||||||||    
T  22584530 cctgcaaaattttttgtttttgaaaa-tagtccatgaccccacttctgtgatgatttgcatacatgacacattataactgaaccaattttgtagtttttg 22584432  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  22584431 atccctgcaaaatattttg 22584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 18136034 - 18135919
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| ||  ||||| ||||||||| |||||||||       ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||    
T  18136034 tgcaaaatttttttgtttttgaaaatagtcactgaccccacttttgtgatgatttgcatacgtgacacattataactaaaccaattttgtagtttttggt 18135935  T
Q  224 ccctgcaaaatattttg 240  Q
    |||| ||||||||||||    
T  18135934 ccct-caaaatattttg 18135919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 49123242 - 49123127
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| ||  ||||| ||||||||| |||||||||       ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||    
T  49123242 tgcaaaatttttttgtttttgaaaatagtcactgaccccacttttgtgatgatttgcatacgtgacacattataactaaaccaattttgtagtttttggt 49123143  T
Q  224 ccctgcaaaatattttg 240  Q
    |||| ||||||||||||    
T  49123142 ccct-caaaatattttg 49123127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 123764 - 123703
Alignment:
Q  173 tgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaat 234  Q
    ||||||||||| ||||||||| || |||||||| ||||||||||||| ||||||||||||||    
T  123764 tgatttgcatacgtggcacattataactgaaccaattttgtagttttcggtccctgcaaaat 123703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 18205235 - 18205352
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| |||  |||| ||  ||||||  |||||||||||||||    
T  18205235 cctgcaaaattttttgtttttgaaaa-tagtcattgaccccacttttgtgatgatttgcatacgtgatacattatagctgaactaattttgtagtttttg 18205333  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  18205334 gtccctgcaaaatattttg 18205352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 18830973 - 18831042
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || |||||||| | ||||||||||||| ||||||||||||||||||    
T  18830973 gatgatttgcatacgtgacacattataactgaaccaactttgtagtttttgatccctgcaaaatattttg 18831042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 32208673 - 32208738
Alignment:
Q  175 atttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||| ||| ||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  32208673 atttgtatacgtgacacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 32208738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 35763874 - 35763757
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| || ||||||       |||||||| |||| || |||||| || |||||||| ||||| |||||||||    
T  35763874 cctgcaaaattttttgtttttgaaaa-tagtcccttaccccaattttgtgatgatttacatacgtagcacattataactgaaccaattttctagtttttg 35763776  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  35763775 atccctgcaaaatattttg 35763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 5063132 - 5063196
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaata 235  Q
    ||||||||||||||||||||| | || |||||| | ||||||||||||||||||||| |||||||    
T  5063132 gatgatttgcatatgtggcacgttataactgaatcaattttgtagtttttggtccctacaaaata 5063196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 9289347 - 9289460
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| || ||||||       |||||||||||||    |||||| || |||||||| ||||| |||||||||    
T  9289347 cctgcaaaattttttgtttttgaaaa-tagtcccttaccccaattttgtgatgatttgcata----gcacattataactgaaccaattttctagtttttg 9289441  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  9289442 gtccctgcaaaatattttg 9289460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 15874397 - 15874441
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttggttt 244  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  15874397 tgaacccattttgtagtttttggtccctgcaaaatattttggttt 15874441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 3178763 - 3178880
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| |||||||| |||| ||||| |||||||||        ||||||||||||  || ||||| || |||||||| |||||||||||||||    
T  3178763 cctgcaaatttttttgtttttgaaaa-tagtccctgaccccacttttttaatgatttgcatacatgacacattataactgaaccaattttgtagtttttg 3178861  T
Q  222 gtccctgcaaaatattttg 240  Q
     |||| |||||||||||||    
T  3178862 atcccagcaaaatattttg 3178880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 52429840 - 52429909
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || ||| ||   ||||||||||||||||| ||||||||||||||||    
T  52429840 gatgatttgcatacgtggcacattataacttaataaattttgtagtttttggttcctgcaaaatattttg 52429909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 20878862 - 20878902
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  20878862 tgaacccattttgtagtttttggtccctgcaaaatattttg 20878902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 41316068 - 41316108
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  41316068 tgaaccaattttgtagtttttggtccctgcaaaatattttg 41316108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 42306073 - 42306113
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  42306073 tgaacccattttgtagtttttggtccctgcaaaatattttg 42306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 55893380 - 55893420
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  55893380 tgaacccattttgtagtttttggtccctgcaaaatattttg 55893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 13064240 - 13064354
Alignment:
Q  125 gcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtc 224  Q
    ||||||||| ||||||||  ||| ||||| |||||||||       ||||||||||||| ||||||||| || ||  |||| |||||||| |||||| |     
T  13064240 gcaaaattttttgtttttgtaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataacaaaaccaattttgtaatttttgata 13064338  T
Q  225 cctgcaaaatattttg 240  Q
    ||||||||||||||||    
T  13064339 cctgcaaaatattttg 13064354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 29420457 - 29420340
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||| | |||||||| |||| |||||||| ||||||       |||||| |||||| |||||||||||||| |||||| |||||||||     |    
T  29420457 cctgcaaaatattttgtttttgaaaa-tagtctctaaccccacttttgtgatgatatgcatacgtggcacatgatgattgaacccattttgtaggaaaag 29420359  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  29420358 gtccttgcaaaatattttg 29420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 23254583 - 23254543
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  23254583 tgaacccattttttagtttttggtccctgcaaaatattttg 23254543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 25358284 - 25358316
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||||||||||||||||||||||    
T  25358284 ttttgtagtttttggtccctgcaaaatattttg 25358316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 38484631 - 38484671
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  38484631 tgaacatattttgtagtttttggtctctgcaaaatattttg 38484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 46292585 - 46292554
Alignment:
Q  209 tttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||||||||||||    
T  46292585 tttgtagtttttggtccctgcaaaatattttg 46292554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 6353508 - 6353470
Alignment:
Q  172 atgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  6353508 atgatttgcacatgtggcacatgatgactgaacatattt 6353470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 28448897 - 28448927
Alignment:
Q  210 ttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||||||||||||||||||||    
T  28448897 ttgtagtttttggtccctgcaaaatattttg 28448927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 5827784 - 5827817
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaac 204  Q
    |||||||||||||||||||||||||||| |||||    
T  5827784 gatgatttgcatatgtggcacatgatgagtgaac 5827817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 19903592 - 19903559
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  19903592 attttgttgtttttggtccctgcaaaatattttg 19903559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 29499245 - 29499278
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  29499245 attttgttgtttttggtccctgcaaaatattttg 29499278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 30046729 - 30046696
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  30046729 attttgttgtttttggtccctgcaaaatattttg 30046696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 30061070 - 30061037
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  30061070 attttgttgtttttggtccctgcaaaatattttg 30061037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 53717093 - 53717004
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttg 212  Q
    |||||||||||| ||||||||||||| ||||| || ||||||       ||||||||||||| ||| ||||| || |||||||| ||||||    
T  53717093 cctgcaaaattttttgttttttaaaa-tagtccctaaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttg 53717004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 23779161 - 23779129
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  23779161 ttttgttgtttttggtccctgcaaaatattttg 23779129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 35420638 - 35420606
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  35420638 ttttgttgtttttggtccctgcaaaatattttg 35420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 50753986 - 50754018
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  50753986 ttttgttgtttttggtccctgcaaaatattttg 50754018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 53915983 - 53915951
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  53915983 ttttgttgtttttggtccctgcaaaatattttg 53915951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 30552224 - 30552341
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| ||||||| |       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  30552224 cctgcaaaattttttgttttttaaaa-tagtcactgaccctatttttatgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttg 30552322  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  30552323 gtccctgcaaaatattttg 30552341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 53701439 - 53701556
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| || ||||| ||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  53701439 cctgcaaaattttttgttttttaaaa-taatctctaaccccatttttgtgatgatttgcatacgtggcacatgatgactgaaccaattttgtagtttttg 53701537  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  53701538 gtccctgcaaaatattttg 53701556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 4513541 - 4513425
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  4513541 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaaccgattttgtagtttttg 4513443  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||| ||||||||||||    
T  4513442 gtcccagcaaaatatttt 4513425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 43440567 - 43440689
Alignment:
Q  117 ttggtcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagt 216  Q
    ||||||||||||||||| ||||||||||||| || |||||| ||| |       ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  43440567 ttggtcctgcaaaattttttgttttttaaaa-taatctctggccctatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagt 43440665  T
Q  217 ttttggtccctgcaaaatattttg 240  Q
    |||||||| |||||||||||||||    
T  43440666 ttttggtctctgcaaaatattttg 43440689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 15016667 - 15016550
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||||||||||||| ||||| |||||||||       ||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  15016667 cctgcaaatttttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgattgaacccattttgtagtttttg 15016569  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  15016568 gtccctgcaaaatattttg 15016550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 39437028 - 39436912
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  39437028 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatatgtggcacattataactgaaccaattttgtagtttttg 39436930  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  39436929 gtccctgcaaaatatttt 39436912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 46186688 - 46186573
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  46186688 tgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgattgaacccattttgtagtttttggt 46186590  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  46186589 ccctgcaaaatattttg 46186573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 4814821 - 4814704
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||| ||       ||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  4814821 cctgcaaaattttttgttttttaaaa-tagtccctgacctcatttttgtgatgatttgcatacgtggcacatgatgactggacccattttgtagtttttg 4814723  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  4814722 gtccttgcaaaatattttg 4814704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 10778652 - 10778535
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||||| |       ||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  10778652 cctgcaaaattttttgtttttgaaaa-tagtccctgaccctacttttgtgatgatttgcatatgtggcacattataactgaaccaattttgtagtttttg 10778554  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  10778553 gtccctgcaaaatattttg 10778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 22156010 - 22156127
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  22156010 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 22156108  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  22156109 gtccctgcaaaatattttg 22156127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 28427528 - 28427411
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       |||||||||||||  |||||||| || |||||||| |||||||||||||||    
T  28427528 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacatggcacattataactgaaccaattttgtagtttttg 28427430  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  28427429 gtccctgcaaaatattttg 28427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 51500606 - 51500489
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||| ||||||||||||| ||| ||||||||| |||||    
T  51500606 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgacacatgatgactggacccattttgtaggttttg 51500508  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  51500507 gtccctgcaaaatattttg 51500489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 3830213 - 3830328
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||||||||||||||  |||||||||||||| ||    
T  3830213 tgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaactcattttgtagttttttgt 3830311  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  3830312 ccctgcaaaatattttg 3830328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 15286402 - 15286307
Alignment:
Q  145 aaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||| ||||       ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  15286402 aaaatagtctctgatcccatttttgtgatgatttgcatacgtggcacatgatgactaaaccgattttgtagtttttggtccctgcaaaatattttg 15286307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 275522 - 275639
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  275522 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 275620  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  275621 gtccctgcaaaatattttg 275639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 3152031 - 3151914
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||     
T  3152031 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttt 3151933  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  3151932 ttccctgcaaaatattttg 3151914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 4950287 - 4950170
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||| | |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  4950287 cctgcaaaattttttgtttttgaaaa-taggccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 4950189  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  4950188 gtccctgcaaaatattttg 4950170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 10977058 - 10977175
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| |||| |||| || |||||||| |||||||||||||||    
T  10977058 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggtacattataactgaaccaattttgtagtttttg 10977156  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  10977157 gtccctgcaaaatattttg 10977175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 13584084 - 13584201
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  13584084 cctgcaaaaatttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 13584182  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  13584183 gtccctgcaaaatattttg 13584201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 18175867 - 18175984
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||||||||| ||||||  |       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  18175867 cctgcaaaattttttgttttt-aaaaatagtccctgaccttatttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 18175965  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  18175966 gtccctgcaaaatattttg 18175984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 20757479 - 20757596
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||| ||||||||| ||||||||| || |||||||| |||||||||||||||    
T  20757479 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgattatttgcatacgtggcacattataactgaaccaattttgtagtttttg 20757577  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  20757578 gtccctgcaaaatattttg 20757596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 39288819 - 39288702
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  39288819 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 39288721  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  39288720 gtccctgcaaaatattttg 39288702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 37506963 - 37507064
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  37506963 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 37507062  T
Q  239 tg 240  Q
    ||    
T  37507063 tg 37507064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 51759900 - 51760008
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||||||||||||||||| ||| ||||||||| |||||    
T  51759900 cctgcaaaattttttgttttttaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgactggacccattttgtaggttttg 51759998  T
Q  222 gtccctgcaa 231  Q
    ||||||||||    
T  51759999 gtccctgcaa 51760008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 8510295 - 8510406
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  8510295 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 8510393  T
Q  222 gtccctgcaaaat 234  Q
    |||||| ||||||    
T  8510394 gtccctacaaaat 8510406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 14633807 - 14633690
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| || ||||||       || |||||||||| ||||||||| || |||||||| |||||||||||||||    
T  14633807 cctgcaaaattttttgtttttgaaaa-tagtccctaaccccacttttgtgaagatttgcatacgtggcacattataactgaaccaattttgtagtttttg 14633709  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  14633708 gtccctgcaaaatattttg 14633690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 20907377 - 20907260
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  20907377 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 20907279  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  20907278 gtccctgcaaaattttttg 20907260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 21159736 - 21159619
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  21159736 cctgcaaaattttttgtttttgaaaa-tagtccctgacaccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 21159638  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  21159637 gtccatgcaaaatattttg 21159619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 45320900 - 45320783
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || | |||||| |||||||||||||||    
T  45320900 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataattgaaccaattttgtagtttttg 45320802  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  45320801 gtccctgcaaaatattttg 45320783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 50196426 - 50196495
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  50196426 gatgatttgcatacgtggcacatgatgactgaacacattctgtagtttttggtccctgcaaaatattttg 50196495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 7518367 - 7518251
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||||||| |||||       ||||||||||||| ||| ||||| || |||||| | |||||||||||||||    
T  7518367 cctgcaaaattttttgtttttgaaaa-tagtctctggccccacttttgtgatgatttgcatacgtgacacattataactgaaacaattttgtagtttttg 7518269  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  7518268 gtccctgcaaaatatttt 7518251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 16123221 - 16123338
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||| ||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||| ||||||    
T  16123221 cctgtaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtaatttttg 16123319  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  16123320 atccctgcaaaatattttg 16123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 29955379 - 29955496
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| |||||||| |||| ||||| |||||||||       ||||||||||||  ||| ||||| || |||||||| |||||||||||||||    
T  29955379 cctgcaaatttttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcattcgtgtcacattataactgaaccaattttgtagtttttg 29955477  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  29955478 gtccctgcaaaatattttg 29955496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 30004533 - 30004650
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| |||||||| |||| ||||| |||||||||       ||||||||||||  ||| ||||| || |||||||| |||||||||||||||    
T  30004533 cctgcaaatttttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatgcgtgacacattataactgaaccaattttgtagtttttg 30004631  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  30004632 gtccctgcaaaatattttg 30004650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 34238678 - 34238795
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| ||||||||||||||     
T  34238678 cctgcaaaattttttgtttttgaaaa-tagtccctgactccacttttgagatgatttgcatacgtggcacattataactgaaccaattttgtagtttttt 34238776  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  34238777 atccctgcaaaatattttg 34238795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 39072134 - 39072016
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||  ||||| ||||||||| |||||||||       ||| ||||||||| ||||||||| || |||||||| |||||||||||||||    
T  39072134 cctgcaaattttttttgtttttgaaaatagtccctgaccccacttttgtgataatttgcatacgtggcacattataactgaaccaattttgtagtttttg 39072035  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||| ||||||    
T  39072034 gtccctgcaaaaaattttg 39072016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 240
Target Start/End: Complemental strand, 40169569 - 40169456
Alignment:
Q  126 caaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtcc 225  Q
    |||||||| |||||||| |||| ||||| |||||||||       ||||||| ||||| ||||||||| || |||||| | |||||||||||||||||||    
T  40169569 caaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgattcgcatacgtggcacattataactgaatcaattttgtagtttttggtcc 40169471  T
Q  226 ctgcaaaatattttg 240  Q
    |||||||||||||||    
T  40169470 ctgcaaaatattttg 40169456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 45161192 - 45161309
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  45161192 cctgcaaaattttttgtttttgaaaa-tagtccctgacaccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 45161290  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||| ||||||||||||||    
T  45161291 gtccttgcaaaatattttg 45161309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 49670710 - 49670641
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  49670710 gatgatttgcatacgtgacacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 49670641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 51834862 - 51834745
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||||| || |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || || ||||| |||||||||||||||    
T  51834862 cctgcaaaactttttgtttttgaaaa-tagtccctgaccccactattgtgatgatttgcatacgtgacacattataacggaaccaattttgtagtttttg 51834764  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  51834763 gtccctgcaaaatattttg 51834745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 25710776 - 25710675
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||||||||| |||       |||||| || ||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||||    
T  25710776 tttttgaaaatagtctctgactccacttttgtgatgatctgtatacgtggcacattataactgaaccaattttgtagtttttggtccctgcaaaatattt 25710677  T
Q  239 tg 240  Q
    ||    
T  25710676 tg 25710675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 45521630 - 45521746
Alignment:
Q  123 ctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttgg 222  Q
    |||||||||||||||||||| |||| ||||| || | ||||       ||||||||||||| ||| ||||| || ||||||||  |||||||||||||||    
T  45521630 ctgcaaaatttattgtttttgaaaa-tagtcacttatcccatttttttgatgatttgcatacgtgacacattataactgaaccagttttgtagtttttgg 45521728  T
Q  223 tccctgcaaaatattttg 240  Q
    ||||||||||||||||||    
T  45521729 tccctgcaaaatattttg 45521746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 12673908 - 12673808
Alignment:
Q  140 ttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    |||| |||||||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||| ||||||||||||||||||    
T  12673908 ttttgaaaatagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttatagttttttgtccctgcaaaatatttt 12673809  T
Q  240 g 240  Q
    |    
T  12673808 g 12673808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 19656821 - 19656706
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||||    
T  19656821 tgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggt 19656723  T
Q  224 ccctgcaaaatattttg 240  Q
    ||  | |||||||||||    
T  19656722 cctggaaaaatattttg 19656706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 50261861 - 50261744
Alignment:
Q  121 tcctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    |||| |||||||| |||||||| |||| ||||||||||| |||       ||||||||||||   |||||||| || |||||||| ||||||||||||||    
T  50261861 tcctacaaaattttttgtttttgaaaa-tagtctctgactccacttttgtgatgatttgcatgc-tggcacattataactgaaccaattttgtagttttt 50261764  T
Q  221 ggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||    
T  50261763 ggtccctgcaaaatattttg 50261744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 26799969 - 26800086
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||| ||||| || |||||||| ||||| |||||||||    
T  26799969 cctgcaaaattttttgtttttgaaaa-tagtccttgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttttagtttttg 26800067  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  26800068 ttccctgcaaaatattttg 26800086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 30130237 - 30130346
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||||||| |||||       ||||||||||||| ||| ||||| ||  ||||||| |||||||||||||||    
T  30130237 cctgcaaaattttttgtttttgaaaa-tagtctctggccccacttttgtgatgatttgcatacgtgacacattatagctgaaccaattttgtagtttttg 30130335  T
Q  222 gtccctgcaaa 232  Q
    |||||||||||    
T  30130336 gtccctgcaaa 30130346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 30268611 - 30268679
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  30268611 gatgatttgcatacgtgacacatgatgactgaaccgattttatagttttt-gtccctgcaaaatattttg 30268679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 30426157 - 30426088
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||| ||||| || ||| |||| ||||||||||||||| ||||||||||||||||||    
T  30426157 gatgatttgcatatgtgacacattataactaaaccaattttgtagtttttgatccctgcaaaatattttg 30426088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 9863275 - 9863206
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || | |||||| ||||||||||||||||||| ||||||||||||||    
T  9863275 gatgatttgcatacgtgacacattataattgaaccaattttgtagtttttggtccatgcaaaatattttg 9863206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 31869829 - 31869760
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| || ||| ||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||    
T  31869829 gatgatctgtatacgtggcacattataactgaaccaattttatagtttttggtccctgcaaaatattttg 31869760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 40560680 - 40560626
Alignment:
Q  185 gtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatttt 239  Q
    |||||||| | ||| |||||| |||||||||||||||||||||||||||||||||    
T  40560680 gtggcacacgctgattgaacccattttgtagtttttggtccctgcaaaatatttt 40560626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 46901228 - 46901296
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| |||||||| |||||||  ||||||||| ||||| ||||||||||||||||||    
T  46901228 gatgatttgcatacgtgacacatgataactgaactcattttgtag-ttttgatccctgcaaaatattttg 46901296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 5048158 - 5048213
Alignment:
Q  185 gtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| | ||| |||||  ||||||||||||||||||||||||||||||||||    
T  5048158 gtggcacacgctgattgaactcattttgtagtttttggtccctgcaaaatattttg 5048213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 33794587 - 33794642
Alignment:
Q  185 gtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| | ||| |||||  ||||||||||||||||||||||||||||||||||    
T  33794587 gtggcacacgctgattgaactcattttgtagtttttggtccctgcaaaatattttg 33794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 20612771 - 20612702
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| || |||||||  |||||||||||| |  ||||||||||||||||||    
T  20612771 gatgatttgcatacgtgacacattataactgaacaaattttgtagtttataatccctgcaaaatattttg 20612702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 14783904 - 14783944
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  14783904 tgaacccattttgtagtttttgggccctgcaaaatattttg 14783944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 31724522 - 31724562
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  31724522 tgaacccactttgtagtttttggtccctgcaaaatattttg 31724562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 45313734 - 45313690
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||    
T  45313734 gatgatttgtatatgtggcgcatgatgactgaacccattttgtag 45313690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 9596966 - 9596927
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  9596966 gatgatttgcatacgtggcacatgatgactgaacccattt 9596927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 239
Target Start/End: Original strand, 45313563 - 45313594
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatatttt 239  Q
    ||||||||||||||||||||||||||||||||    
T  45313563 ttttgtagtttttggtccctgcaaaatatttt 45313594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 36732767 - 36732801
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacc 205  Q
    ||||||||||| |||||||||||||||||||||||    
T  36732767 gatgatttgcacatgtggcacatgatgactgaacc 36732801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 2439969 - 2439936
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||| ||||||||||||||    
T  2439969 attttgtagtttttggtccttgcaaaatattttg 2439936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 20124832 - 20124865
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| |||||||||||||||||||||||||    
T  20124832 attttgtaatttttggtccctgcaaaatattttg 20124865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 28552084 - 28552117
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  28552084 attttgttgtttttggtccctgcaaaatattttg 28552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 28942678 - 28942711
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||| ||||||||||||||||||||||||||||    
T  28942678 attttatagtttttggtccctgcaaaatattttg 28942711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 29446035 - 29446124
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttg 212  Q
    |||||||||||| ||||||||| ||||||||| || ||||||       ||||||||||||| ||| ||||| || |||||||| ||||||    
T  29446035 cctgcaaaattttttgtttttt-aaaatagtccctaaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttg 29446124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 43441540 - 43441507
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  43441540 attttgttgtttttggtccctgcaaaatattttg 43441507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 51058718 - 51058751
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaac 204  Q
    ||||||||||||||||| ||||||||||||||||    
T  51058718 gatgatttgcatatgtgacacatgatgactgaac 51058751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 29955597 - 29955565
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||||||| |||||    
T  29955597 ttttgtagtttttggtccctgcaaaattttttg 29955565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 30004752 - 30004720
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||||||||||||||||| |||||    
T  30004752 ttttgtagtttttggtccctgcaaaattttttg 30004720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 32119284 - 32119316
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  32119284 ttttgttgtttttggtccctgcaaaatattttg 32119316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 35936844 - 35936876
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  35936844 ttttgttgtttttggtccctgcaaaatattttg 35936876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 47005455 - 47005423
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  47005455 ttttgttgtttttggtccctgcaaaatattttg 47005423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 51550382 - 51550350
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  51550382 ttttgttgtttttggtccctgcaaaatattttg 51550350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 24483478 - 24483595
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| ||||||||||||||||||||       ||||||||||||| ||| |||||||| |||||||| |||||||||||||||    
T  24483478 cctgcaaaattttttgttttt-aaaaatagtctctgaccccacttttgtgatgatttgcatacgtgtcacatgataactgaaccaattttgtagtttttg 24483576  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  24483577 gtccctgcaaaatattttg 24483595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 43597421 - 43597305
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  43597421 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatacgtgacacatgatgactgaacccattttgtagtttttg 43597323  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  43597322 gtccctgcaaaatatttt 43597305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 19183863 - 19183980
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  19183863 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 19183961  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  19183962 gtccctgcaaaatattttg 19183980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 23989916 - 23990033
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  23989916 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 23990014  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  23990015 gtccctgcaaaatattttg 23990033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 26814148 - 26814031
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  26814148 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 26814050  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  26814049 gtccctgcaaaatattttg 26814031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 38980173 - 38980056
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  38980173 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 38980075  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  38980074 gtccctgcaaaatattttg 38980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 45442408 - 45442510
Alignment:
Q  138 ttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatatt 237  Q
    |||||| ||||||||| |||||||||       ||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45442408 tttttttaaaatagtccctgaccccatttttgtgattatttgcatacgtggcacatgatgactgaaccgattttgtagtttttggtccctgcaaaatatt 45442507  T
Q  238 ttg 240  Q
    |||    
T  45442508 ttg 45442510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 43592141 - 43592246
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| |||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  43592141 tttttgaaaatagtccctgaccccatttttgtgatgatttgcatacgtggcacatgatgattgaacccgttttgtagtttttggtccctgcaaaatattt 43592240  T
Q  239 tggttt 244  Q
    ||||||    
T  43592241 tggttt 43592246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 3838183 - 3838066
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  3838183 cctgcaaaattttttgtttttgaaaa-tagtccctgacaccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 3838085  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  3838084 gtccctgcaaaatattttg 3838066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 7814526 - 7814409
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  7814526 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgtcacattataactgaaccaattttgtagtttttg 7814428  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  7814427 atccctgcaaaatattttg 7814409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 8046409 - 8046526
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||| ||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  8046409 cctgcagaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 8046507  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  8046508 gtccctgcaaaatattttg 8046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 17541696 - 17541579
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| ||||| |||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  17541696 cctgcaaaattttttgttttttaaaa-tagtccctgactccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 17541598  T
Q  222 gtccctgcaaaatattttg 240  Q
     ||||||||||||||||||    
T  17541597 atccctgcaaaatattttg 17541579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 31326171 - 31326055
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| |||||||||||||||||  || |||||||||||||||    
T  31326171 cctgcaaaattttttgttttttaaaa-tagtcgctgaccccatttttgtgatgatttgcatacgtggcacatgatgactggccc-attttgtagtttttg 31326074  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||| |||||||||    
T  31326073 gtccctgcacaatattttg 31326055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 32691440 - 32691509
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32691440 gatgatttgcatacgtggcacgtgatgactgaacccattttgtagtttttggtccctgcaaaatattttg 32691509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 24483611 - 24483727
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  24483611 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 24483709  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  24483710 gtccctgcaaaatatttt 24483727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 7814656 - 7814542
Alignment:
Q  125 gcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtc 224  Q
    ||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| ||| ||||| || |||||||| ||||||||||||||| ||    
T  7814656 gcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtgtcacattataactgaaccaattttgtagtttttgatc 7814558  T
Q  225 cctgcaaaatattttg 240  Q
    ||||||||||||||||    
T  7814557 cctgcaaaatattttg 7814542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 14393050 - 14392933
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||| ||||||||||||| || |||||||  |||||||||||||||    
T  14393050 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgtatatgtggcacattataactgaactaattttgtagtttttg 14392952  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||| |||||||||||||||    
T  14392951 gtctctgcaaaatattttg 14392933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 38731907 - 38732024
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| ||||||||||||| ||||| |||||||||       ||||||||||||| ||| ||||| || |||||||| |||||||||||||||    
T  38731907 cctgcaaaattttttgttttttaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaaccaattttgtagtttttg 38732005  T
Q  222 gtccctgcaaaatattttg 240  Q
    || ||||||||| ||||||    
T  38732006 gttcctgcaaaaaattttg 38732024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 40302056 - 40302173
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||| | |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || ||| |||| |||||||||||||||    
T  40302056 cctgcaaaatattttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactcaaccaattttgtagtttttg 40302154  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  40302155 gtccctgcaaaatattttg 40302173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 43710459 - 43710576
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||| ||       ||||||||||||| ||||||||| || |||||||  |||||||||||||||    
T  43710459 cctgcaaaattttttgtttttgaaaa-tagtccctgacctcacttttgtgatgatttgcatacgtggcacattataactgaacaaattttgtagtttttg 43710557  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  43710558 gtccctgcaaaatattttg 43710576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 43789111 - 43788994
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| |||||| || || |||||||| |||||||||||||||    
T  43789111 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcatattatcactgaaccaattttgtagtttttg 43789013  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||| |||||||||||||||    
T  43789012 gtctctgcaaaatattttg 43788994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 37272022 - 37271912
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  37272022 cctgcaaaattttttgtttttgaaaa-tagtccatgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 37271924  T
Q  222 gtccctgcaaaa 233  Q
    ||||||||||||    
T  37271923 gtccctgcaaaa 37271912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 16900023 - 16900092
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||  ||||||||||||||||||||||||||||||||||    
T  16900023 gatgatttgcatacgtggcacattataactgaacgaattttgtagtttttggtccctgcaaaatattttg 16900092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 16993414 - 16993483
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||  ||||||||||||||||||||||||||||||||||    
T  16993414 gatgatttgcatacgtggcacattataactgaacgaattttgtagtttttggtccctgcaaaatattttg 16993483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 22881890 - 22881773
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| || ||||||       ||||||||||||| ||| ||||| || ||| |||| |||||||||||||||    
T  22881890 cctgcaaaattttttgtttttgaaaa-tagtccctaaccccacttttgtgatgatttgcatacgtgtcacattataactaaaccaattttgtagtttttg 22881792  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  22881791 gtccctgcaaaatattttg 22881773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 33732987 - 33733056
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||    
T  33732987 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccttgcaaaatattttg 33733056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 240
Target Start/End: Complemental strand, 19831714 - 19831598
Alignment:
Q  123 ctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttgg 222  Q
    |||||||||||||||||||| |||| ||||| || | ||||       ||||||||||||| ||| ||||| || ||||||||  |||||||||||||||    
T  19831714 ctgcaaaatttattgtttttgaaaa-tagtcacttatcccatttttttgatgatttgcatacgtgacacattataactgaaccagttttgtagtttttgg 19831616  T
Q  223 tccctgcaaaatattttg 240  Q
    ||||||||||||||||||    
T  19831615 tccctgcaaaatattttg 19831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 40786541 - 40786657
Alignment:
Q  123 ctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttgg 222  Q
    ||||||||||| |||||||| |||| |||||  ||||||||       ||||||||||||| ||| ||||| || | |||||| ||||||||||||||||    
T  40786541 ctgcaaaattttttgtttttgaaaa-tagtccatgaccccacttttgtgatgatttgcatacgtgacacattataattgaaccaattttgtagtttttgg 40786639  T
Q  223 tccctgcaaaatattttg 240  Q
    ||||||||||||||||||    
T  40786640 tccctgcaaaatattttg 40786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 44985717 - 44985818
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||| ||| | || |||||||| ||||||||||||||||||||||||||||||||    
T  44985717 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtgacacgttataactgaaccaattttgtagtttttggtccctgcaaaatattt 44985816  T
Q  239 tg 240  Q
    ||    
T  44985817 tg 44985818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 1497816 - 1497747
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| |||| |||| || |||||||| ||||| ||||||||||||||||||||||||||||    
T  1497816 gatgatttgcatacgtggtacattataactgaaccaattttttagtttttggtccctgcaaaatattttg 1497747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 20658191 - 20658256
Alignment:
Q  175 atttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| ||||||||| || |||||||| |||||||||||||||||||| |||||||||||||    
T  20658191 atttgcatacgtggcacattataactgaaccaattttgtagtttttggtcccagcaaaatattttg 20658256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 10665065 - 10665177
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| |||||||||||||||       |||||||| |||| |||| |||| || |||||| | |||||||||||||||||    
T  10665065 tgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttacatacgtggtacattataactgaagcaattttgtagtttttggt 10665163  T
Q  224 ccctgcaaaatatt 237  Q
    || |||||||||||    
T  10665164 ccttgcaaaatatt 10665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 41791099 - 41791215
Alignment:
Q  123 ctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttgg 222  Q
    ||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || ||||||   ||||||||||||||||    
T  41791099 ctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataactgaattaattttgtagtttttgg 41791197  T
Q  223 tccctgcaaaatattttg 240  Q
    |||||| |||||||||||    
T  41791198 tccctgtaaaatattttg 41791215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 41693906 - 41693806
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||| ||||| |  |||||||| ||||| ||||||||||||||||||||||||||    
T  41693906 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtgacacattacaactgaaccaattttttagtttttggtccctgcaaaatattt 41693807  T
Q  239 t 239  Q
    |    
T  41693806 t 41693806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 5790770 - 5790703
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| |||||  |||||||||||||||||||||||||||    
T  5790770 gatgatttgcatacgtggcacattataactgaaccaatttt--agtttttggtccctgcaaaatattttg 5790703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 10374946 - 10374880
Alignment:
Q  175 atttgcatatgtggc-acatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||| ||||| |||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  10374946 atttgcatacgtggccacattataactgaaccaattttgtagtttttggtccctgcaaaatattttg 10374880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 11713764 - 11713647
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| ||||||| |       | ||||||||||| ||||||||| || | ||| || |||||||||||||||    
T  11713764 cctgcaaaattttttgtttttgaaaa-tagtccctgacccaacttttgtggtgatttgcatacgtggcacattataattgagccaattttgtagtttttg 11713666  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||| ||||||||||    
T  11713665 gtccctgctaaatattttg 11713647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 25954298 - 25954229
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||  ||||| || |||||||| ||||||||||||||||| ||||||||||||||||    
T  25954298 gatgatttgcatacgtaacacattataactgaaccaattttgtagtttttggttcctgcaaaatattttg 25954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 26238939 - 26239008
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctatttt-gtagtttttggtccctgcaaaatatttt 239  Q
    ||||||||||||| ||||||||| || |||||||| ||||| |||||||||||||| |||||||||||||    
T  26238939 gatgatttgcatacgtggcacataataactgaaccaatttttgtagtttttggtccatgcaaaatatttt 26239008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 29865384 - 29865315
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||| ||||| |  |||||||| ||||| ||||||||||||||||||||||||||||    
T  29865384 gatgatttgcatacgtgacacattaatactgaaccaattttatagtttttggtccctgcaaaatattttg 29865315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 44073726 - 44073609
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||| ||       ||| ||||||||| ||| ||||| || || ||||| ||||| |||||||||    
T  44073726 cctgcaaaattttttgtttttgaaaa-tagtccctgacctcacttttgtgataatttgcatacgtgacacattataaccgaaccaattttatagtttttg 44073628  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  44073627 gtccctgcaaaatattttg 44073609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 26707999 - 26708064
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatat 236  Q
    ||||||||||||| ||| ||||| || |||||||  |||||||||||||||||| |||||||||||    
T  26707999 gatgatttgcatacgtgacacattataactgaactaattttgtagtttttggtctctgcaaaatat 26708064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 31225844 - 31225912
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||| | ||| ||||| || |||||||| |||||||||||||||||||| |||||||||||||    
T  31225844 gatgatttgca-acgtgacacattataactgaaccaattttgtagtttttggtccccgcaaaatattttg 31225912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 44993974 - 44993881
Alignment:
Q  127 aaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    ||||||| ||||||||||||| |||||||||| ||||       ||||||||||||| ||||||||||||||| ||||  |||| ||||||||||    
T  44993974 aaaattttttgttttttaaaa-tagtctctgatcccatttttgtgatgatttgcatacgtggcacatgatgaccgaactcatttcgtagtttttg 44993881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 4731889 - 4731849
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  4731889 tgaacccattttgtagtttttggtccctgcaaaatattttg 4731849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 12414043 - 12414003
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  12414043 tgaacccattttgtagtttttggtccctgcaaaatattttg 12414003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 12426103 - 12426063
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  12426103 tgaacccattttgtagtttttggtccctgcaaaatattttg 12426063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 17912529 - 17912647
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngat-gatttgcatatgtggcacatgatgactgaacctattttgtagttttt 220  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||| || ||||||| | | ||||| || |||||||| ||||||||||||||    
T  17912529 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatagacttgcatacgggacacattataactgaaccaattttgtagttttt 17912627  T
Q  221 ggtccctgcaaaatattttg 240  Q
      ||||||||||||||||||    
T  17912628 aatccctgcaaaatattttg 17912647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 36622375 - 36622443
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||||  || ||||||||||| ||||| ||||| |||||||||||| |||||||| ||||||    
T  36622375 gatgatttgcatac-tgccacatgatgacggaaccgattttatagtttttggtctctgcaaaacattttg 36622443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 13215296 - 13215257
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  13215296 gatgatttgcacatgtggcacatgatgactgaacccattt 13215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 14003680 - 14003646
Alignment:
Q  206 tattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| ||||||||||||||||||||||||||    
T  14003680 tattttgttgtttttggtccctgcaaaatattttg 14003646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 1295418 - 1295385
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaac 204  Q
    ||||||||||| ||||||||||||||||||||||    
T  1295418 gatgatttgcacatgtggcacatgatgactgaac 1295385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 12835454 - 12835514
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaa 232  Q
    ||||||||||||| ||||||||| || || ||||| ||||| || |||||||||||||||||    
T  12835454 gatgatttgcatacgtggcacattataacggaaccaattttata-tttttggtccctgcaaa 12835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 15842760 - 15842727
Alignment:
Q  207 attttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||| ||||||||||||||||||||||||||    
T  15842760 attttgttgtttttggtccctgcaaaatattttg 15842727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 11788353 - 11788321
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  11788353 ttttgttgtttttggtccctgcaaaatattttg 11788321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 13215124 - 13215156
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  13215124 ttttgttgtttttggtccctgcaaaatattttg 13215156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 24358680 - 24358712
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  24358680 ttttgttgtttttggtccctgcaaaatattttg 24358712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 29859808 - 29859776
Alignment:
Q  208 ttttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||    
T  29859808 ttttgttgtttttggtccctgcaaaatattttg 29859776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 35155421 - 35155465
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||||||||| ||||| ||||||||||||||||  |||||||||    
T  35155421 gatgatttgcacatgtgccacatgatgactgaactcattttgtag 35155465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 8413 - 8528
Alignment:
Q  124 tgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggt 223  Q
    |||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  8413 tgcaaaattttttgtttttgaaaa-tagtccctgaccccatttttgtgatgatttgcatatgtggcacatgatgactgaacccattttgtaatttttggt 8511  T
Q  224 ccctgcaaaatattttg 240  Q
    |||||||||||||||||    
T  8512 ccctgcaaaatattttg 8528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 1563 - 1446
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  1563 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatatgtggcacattataactgaaccaattttgtagtttttg 1465  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  1464 gtccctgcaaaattttttg 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 8628 - 8745
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  8628 cctgcaaaattttttgtttttgaaaa-tagtccctgatcccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 8726  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  8727 gtccctgcaaaatattttg 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 209 - 96
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  209 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 111  T
Q  222 gtccctgcaaaatat 236  Q
    |||||||||||||||    
T  110 gtccctgcaaaatat 96  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 3212 - 3095
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||||       ||||||||||||| |||| |||| || |||||| | |||||||||||||||    
T  3212 cctgcaaaattttttgtttttgaaaa-tagtctctgaccccacttttgtgatgatttgcatacgtggtacattataactgaatcaattttgtagtttttg 3114  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  3113 gtccctgcaaaatattttg 3095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 94138 - 94255
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||| ||| ||||||||||||| |||||  ||||||||       ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  94138 cctgcaaatttttttgttttttaaaa-tagtccttgaccccatttttgtgatgatttgcatacgtggcacatgatgactgaacccattttgtagtttttg 94236  T
Q  222 gtccctgcaaaatattttg 240  Q
    || |||| |||||||||||    
T  94237 gtacctgtaaaatattttg 94255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 12263 - 12379
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||| ||| ||||||||| || |||||||| |||||||||||||||    
T  12263 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgtatacgtggcacattataactgaaccaattttgtagtttttg 12361  T
Q  222 gtccctgcaaaatatttt 239  Q
    ||||||||||||||||||    
T  12362 gtccctgcaaaatatttt 12379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 4233 - 4116
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||||||| | |||||||||       ||||||||| ||| ||||||||| || |||||||| |||||||||||||||    
T  4233 cctgcaaaattttttgttttt-aaaaatagaccctgaccccacttttgtgatgatttgtatacgtggcacattataactgaaccaattttgtagtttttg 4135  T
Q  222 gtccctgcaaaatattttg 240  Q
    ||||||||||||| |||||    
T  4134 gtccctgcaaaattttttg 4116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 3791 - 3723
Alignment:
Q  172 atgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  3791 atgatttgcatacgtggcacatgatgactaaactgattttgtagtttttggtccctgcaaaatattttg 3723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 10236 - 10358
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| |||||||||       ||||||||||||| ||| ||||| || | |||||| |||||||||||||||    
T  10236 cctgcaaaattttttgtttttgaaaa-tagtccctgaccccacttttgtgatgatttgcatacgtgacacattataattgaaccaattttgtagtttttg 10334  T
Q  222 gtccctgcaaaatattttggttta 245  Q
    |||| |||||||||||||| ||||    
T  10335 gtccatgcaaaatattttgtttta 10358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 2856 - 2973
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||  ||||||||       ||||||||| ||| |||||||| |||||||| ||| | |||||||||||||    
T  2856 cctgcaaaattttttgtttttcaaaa-tagtccttgaccccatttttgtgatgatttgtatacgtggcacaagatgactggacccaatttgtagtttttg 2954  T
Q  222 gtccctgcaaaatattttg 240  Q
    |||||||||||||||||||    
T  2955 gtccctgcaaaatattttg 2973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 8900 - 8831
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||    
T  8900 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttgatccctgcaaaatattttg 8831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 14824 - 14893
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||    
T  14824 gatgatttgcatacgtggcacattataactgaaccaattttgtagtttttggtccttgcaaaatattttg 14893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 17947 - 17846
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattt 238  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||| ||| | || |||||||| ||||||||||||||||||||||||||||||||    
T  17947 tttttgaaaatagtccctgaccccacttttgtgatgatttgcatacgtgtcactttataactgaaccaattttgtagtttttggtccctgcaaaatattt 17848  T
Q  239 tg 240  Q
    ||    
T  17847 tg 17846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 5626 - 5520
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| ||||| | |||||||       ||||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  5626 cctgcaaaattttttgtttttgaaaa-tagtccccgaccccacgtttgtgatgatttgcatacgtggcacattataactgaaccaattttgtagtttttg 5528  T
Q  222 gtccctgc 229  Q
    ||||||||    
T  5527 gtccctgc 5520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 35143 - 35076
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    ||||||||||||| ||||||||| || |||||||| |||||  |||||||||||||||||||||||||||    
T  35143 gatgatttgcatacgtggcacattataactgaaccaatttt--agtttttggtccctgcaaaatattttg 35076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 33073 - 33131
Alignment:
Q  182 tatgtggcacatgatgactgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||||| || | ||| |||||| ||||||||||||||||||||||||||||||||||    
T  33073 tatgtggcgcacgctgattgaacccattttgtagtttttggtccctgcaaaatattttg 33131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 7659 - 7699
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  7659 tgaacccattttgtagtttttggtccctgcaaaatattttg 7699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 24579 - 24469
Alignment:
Q  122 cctgcaaaatttattgttttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtagtttttg 221  Q
    |||||||||||| |||||||| |||| |||||||||||||         ||||||||||||| ||||| ||| ||  ||||||| ||||||||||||||     
T  24579 cctgcaaaattttttgtttttgaaaa-tagtctctgaccctgctgttgtgatgatttgcatacgtggcgcattatatctgaaccaattttgtagtttttt 24481  T
Q  222 gtccctgcaaaa 233  Q
    |||||| |||||    
T  24480 gtccctacaaaa 24469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 11123 - 11163
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  11123 tgaacccattttgtagattttggtccctgcaaaatattttg 11163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 11261 - 11221
Alignment:
Q  200 tgaacctattttgtagtttttggtccctgcaaaatattttg 240  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  11261 tgaacccattttgtagattttggtccctgcaaaatattttg 11221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 5306 - 5382
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||    
T  5306 tttttgaaaatagtcactgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtag 5382  T

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Target: scaffold0709 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 5326 - 5402
Alignment:
Q  139 tttttaaaaatagtctctgaccccannnnnnngatgatttgcatatgtggcacatgatgactgaacctattttgtag 215  Q
    ||||| ||||||||| |||||||||       ||||||||||||| ||||||||| || |||||||| |||||||||    
T  5326 tttttgaaaatagtcactgaccccacttttgtgatgatttgcatacgtggcacattataactgaaccaattttgtag 5402  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 16852 - 16891
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  16852 gatgatttgcacatgtggcacatgatgactgaacccattt 16891  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 34956 - 34917
Alignment:
Q  171 gatgatttgcatatgtggcacatgatgactgaacctattt 210  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  34956 gatgatttgcatatgtgacacatgatgactgaacccattt 34917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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