View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18453_high_48 (Length: 280)
Name: NF18453_high_48
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18453_high_48 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 32142289 - 32142533
Alignment:
| Q |
13 |
aatatgaagttgtgaagaagagtatccaatcagaaagcaacttgagacatgacaacaagccgtctttggtttctatattttacgtaatgtaagcataaga |
112 |
Q |
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| T |
32142289 |
aatatgaagttgtgaagaagagtatccaatcagaaagcaacttgagacatgacaacaagccgtctttggtttctatattttacgtaatgtaagcataaga |
32142388 |
T |
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| Q |
113 |
tgttagttaatagttatattcaacacttgcagagtggcgcttaaattttatcgaacaaaatgcttttacatgtaatattttattgacaaactgaaaaata |
212 |
Q |
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||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32142389 |
tgttagt-------tatattcaacacttgcagagtggcgcttaaattgtatcgaacaaaatgcttttacatgtaatattttattgacaaactgaaaaata |
32142481 |
T |
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| Q |
213 |
aaatcactaaaccttagcattactcactcacatatattccttctcaagaaaa |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32142482 |
aaatcactaaaccttagcattactcactcacatatattccttctcaagaaaa |
32142533 |
T |
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