View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18453_high_5 (Length: 736)

Name: NF18453_high_5
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18453_high_5
NF18453_high_5
[»] chr4 (40 HSPs)
chr4 (423-718)||(55385050-55385345)
chr4 (122-366)||(55385394-55385625)
chr4 (15-119)||(17619146-17619250)
chr4 (15-124)||(32728354-32728463)
chr4 (15-119)||(711962-712066)
chr4 (15-115)||(48435573-48435673)
chr4 (15-119)||(55272370-55272474)
chr4 (22-124)||(27893843-27893945)
chr4 (16-124)||(3756242-3756349)
chr4 (27-119)||(27864566-27864658)
chr4 (15-119)||(46827700-46827804)
chr4 (22-119)||(28988475-28988572)
chr4 (15-119)||(960864-960968)
chr4 (15-122)||(35037004-35037111)
chr4 (15-121)||(38851513-38851619)
chr4 (27-125)||(48463456-48463554)
chr4 (22-125)||(31680898-31681001)
chr4 (33-119)||(1771278-1771364)
chr4 (33-119)||(55966358-55966444)
chr4 (15-88)||(19879987-19880060)
chr4 (15-78)||(36004110-36004173)
chr4 (22-119)||(25051695-25051792)
chr4 (22-119)||(27550311-27550408)
chr4 (22-119)||(33703143-33703240)
chr4 (33-122)||(43514698-43514787)
chr4 (22-121)||(43949802-43949902)
chr4 (22-121)||(41327544-41327643)
chr4 (34-119)||(28982835-28982920)
chr4 (22-119)||(35017735-35017831)
chr4 (22-119)||(41847973-41848070)
chr4 (22-119)||(41878408-41878505)
chr4 (22-119)||(45490314-45490411)
chr4 (22-121)||(39631100-39631200)
chr4 (22-119)||(12496958-12497055)
chr4 (22-119)||(23035982-23036079)
chr4 (22-119)||(27316714-27316811)
chr4 (22-118)||(23204779-23204875)
chr4 (41-124)||(49229684-49229767)
chr4 (70-119)||(30189275-30189324)
chr4 (82-119)||(36004165-36004202)
[»] chr8 (27 HSPs)
chr8 (15-119)||(35181518-35181622)
chr8 (15-119)||(34304790-34304894)
chr8 (15-122)||(33629987-33630094)
chr8 (15-124)||(18066712-18066821)
chr8 (22-123)||(29800951-29801052)
chr8 (22-124)||(42197436-42197538)
chr8 (15-119)||(16603620-16603724)
chr8 (22-122)||(42295194-42295294)
chr8 (22-119)||(11582768-11582865)
chr8 (22-119)||(29705364-29705461)
chr8 (22-119)||(36743484-36743581)
chr8 (27-123)||(20148758-20148854)
chr8 (15-78)||(10678146-10678209)
chr8 (22-121)||(26125635-26125734)
chr8 (22-119)||(1375544-1375641)
chr8 (22-119)||(2165964-2166061)
chr8 (22-119)||(5754905-5755002)
chr8 (15-119)||(16358827-16358932)
chr8 (34-121)||(30912575-30912662)
chr8 (27-122)||(42699256-42699351)
chr8 (22-119)||(30660743-30660840)
chr8 (22-112)||(40528635-40528726)
chr8 (22-128)||(2546989-2547095)
chr8 (33-119)||(45397318-45397404)
chr8 (22-113)||(31384672-31384763)
chr8 (15-119)||(19386559-19386668)
chr8 (82-119)||(10678201-10678238)
[»] chr6 (18 HSPs)
chr6 (15-119)||(33242405-33242509)
chr6 (15-121)||(27441542-27441648)
chr6 (21-119)||(33253915-33254013)
chr6 (27-121)||(24203993-24204087)
chr6 (22-119)||(13743222-13743319)
chr6 (22-119)||(13748722-13748819)
chr6 (22-119)||(3213402-3213499)
chr6 (22-119)||(7292749-7292846)
chr6 (22-119)||(9698334-9698431)
chr6 (22-119)||(21279931-21280028)
chr6 (22-119)||(26670010-26670107)
chr6 (27-119)||(7367551-7367643)
chr6 (22-119)||(26466801-26466898)
chr6 (22-119)||(30014345-30014442)
chr6 (22-122)||(30735981-30736081)
chr6 (15-119)||(31109216-31109320)
chr6 (22-119)||(7273336-7273433)
chr6 (22-119)||(21293678-21293775)
[»] chr2 (30 HSPs)
chr2 (15-119)||(43114559-43114663)
chr2 (15-121)||(11825648-11825754)
chr2 (15-121)||(41281968-41282074)
chr2 (15-119)||(966828-966932)
chr2 (15-119)||(12415454-12415558)
chr2 (15-119)||(12427514-12427618)
chr2 (15-119)||(16803970-16804074)
chr2 (15-119)||(16843252-16843356)
chr2 (15-119)||(18491707-18491811)
chr2 (15-115)||(34895735-34895835)
chr2 (15-121)||(4299414-4299520)
chr2 (36-124)||(6518484-6518571)
chr2 (22-119)||(1750416-1750513)
chr2 (22-119)||(34817777-34817874)
chr2 (22-119)||(4764727-4764824)
chr2 (22-119)||(12302254-12302351)
chr2 (22-119)||(16096749-16096846)
chr2 (22-119)||(19047159-19047256)
chr2 (22-123)||(43490402-43490503)
chr2 (15-99)||(12531657-12531740)
chr2 (15-97)||(4451944-4452026)
chr2 (22-119)||(13780736-13780833)
chr2 (15-124)||(14285673-14285782)
chr2 (22-119)||(30838634-30838731)
chr2 (22-119)||(43335764-43335861)
chr2 (33-121)||(7070416-7070504)
chr2 (25-123)||(8896587-8896685)
chr2 (42-122)||(33229300-33229381)
chr2 (25-119)||(42026769-42026865)
chr2 (27-78)||(42849864-42849915)
[»] chr1 (24 HSPs)
chr1 (15-119)||(44112679-44112783)
chr1 (15-119)||(48119630-48119734)
chr1 (15-119)||(35003296-35003400)
chr1 (15-119)||(45427739-45427843)
chr1 (15-125)||(38113189-38113299)
chr1 (15-124)||(41065150-41065259)
chr1 (15-119)||(38335920-38336024)
chr1 (15-119)||(35000107-35000211)
chr1 (15-119)||(46168385-46168489)
chr1 (15-124)||(45705822-45705931)
chr1 (15-119)||(45639726-45639830)
chr1 (22-119)||(43571087-43571184)
chr1 (27-124)||(2497568-2497665)
chr1 (22-119)||(5489778-5489875)
chr1 (22-119)||(37814780-37814877)
chr1 (22-119)||(48498963-48499060)
chr1 (15-119)||(26585464-26585568)
chr1 (22-123)||(4401325-4401427)
chr1 (22-119)||(23989524-23989622)
chr1 (22-119)||(750306-750403)
chr1 (22-119)||(24769500-24769597)
chr1 (22-121)||(7447826-7447924)
chr1 (64-119)||(14427349-14427404)
chr1 (33-119)||(50448272-50448358)
[»] scaffold0100 (1 HSPs)
scaffold0100 (15-119)||(35450-35554)
[»] chr3 (25 HSPs)
chr3 (15-119)||(9434126-9434230)
chr3 (15-119)||(4190259-4190363)
chr3 (15-119)||(10457886-10457990)
chr3 (15-124)||(25996265-25996374)
chr3 (22-119)||(40808867-40808964)
chr3 (15-119)||(34791831-34791935)
chr3 (15-119)||(51757595-51757699)
chr3 (27-119)||(45126934-45127026)
chr3 (16-119)||(52627972-52628075)
chr3 (33-119)||(42100690-42100776)
chr3 (22-119)||(46941055-46941152)
chr3 (22-119)||(54237098-54237195)
chr3 (22-121)||(27748563-27748662)
chr3 (21-119)||(53273684-53273782)
chr3 (22-119)||(24688403-24688500)
chr3 (22-119)||(25413683-25413780)
chr3 (22-119)||(36150132-36150229)
chr3 (22-119)||(40480751-40480848)
chr3 (22-119)||(42394420-42394517)
chr3 (22-123)||(53581859-53581960)
chr3 (22-119)||(54246149-54246246)
chr3 (22-119)||(47191027-47191123)
chr3 (17-79)||(19148821-19148883)
chr3 (36-117)||(29558249-29558330)
chr3 (22-78)||(51249351-51249407)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-121)||(45713-45819)
[»] chr7 (27 HSPs)
chr7 (15-119)||(40236921-40237025)
chr7 (15-119)||(33384872-33384977)
chr7 (15-119)||(31513289-31513393)
chr7 (15-119)||(31408627-31408731)
chr7 (15-119)||(27535225-27535329)
chr7 (22-123)||(4638200-4638301)
chr7 (22-121)||(10573749-10573848)
chr7 (22-119)||(24001013-24001110)
chr7 (22-119)||(42538432-42538529)
chr7 (22-122)||(43343625-43343725)
chr7 (27-123)||(44326176-44326272)
chr7 (22-121)||(44416935-44417034)
chr7 (22-124)||(5194232-5194334)
chr7 (22-124)||(35069718-35069820)
chr7 (27-118)||(26898408-26898499)
chr7 (22-112)||(32029818-32029908)
chr7 (22-119)||(5015397-5015494)
chr7 (22-119)||(5810925-5811022)
chr7 (22-123)||(16180358-16180458)
chr7 (22-119)||(43317445-43317542)
chr7 (33-119)||(42972854-42972940)
chr7 (22-115)||(45326026-45326119)
chr7 (60-119)||(39998410-39998469)
chr7 (22-119)||(24280597-24280694)
chr7 (22-119)||(41861676-41861775)
chr7 (22-91)||(38160580-38160649)
chr7 (33-119)||(9216304-9216389)
[»] chr5 (14 HSPs)
chr5 (15-119)||(17208076-17208180)
chr5 (15-119)||(32473388-32473492)
chr5 (22-122)||(5256994-5257094)
chr5 (22-119)||(7617135-7617232)
chr5 (15-119)||(30622713-30622816)
chr5 (22-119)||(2614650-2614747)
chr5 (22-119)||(22512307-22512404)
chr5 (22-119)||(41334664-41334761)
chr5 (22-119)||(18033984-18034081)
chr5 (49-119)||(33855071-33855141)
chr5 (22-119)||(33801471-33801568)
chr5 (22-119)||(38470581-38470678)
chr5 (63-121)||(25915029-25915087)
chr5 (22-113)||(39122434-39122524)
[»] scaffold0385 (1 HSPs)
scaffold0385 (22-119)||(11253-11350)
[»] scaffold0119 (1 HSPs)
scaffold0119 (22-119)||(687-784)
[»] scaffold0038 (1 HSPs)
scaffold0038 (22-119)||(112657-112754)
[»] scaffold0187 (2 HSPs)
scaffold0187 (22-119)||(14189-14286)
scaffold0187 (22-119)||(24517-24614)
[»] scaffold0157 (1 HSPs)
scaffold0157 (22-119)||(23422-23519)


Alignment Details
Target: chr4 (Bit Score: 280; Significance: 1e-156; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 423 - 718
Target Start/End: Complemental strand, 55385345 - 55385050
Alignment:
Q  423 gtccggttgaataaatcttcaatcatgaattataggacaaatgaattggacaggtcttgtgcttgtattgtatattttcttacaaatagaagtataataa 522  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  55385345 gtccgggtgaataaatcttcaatcatgaattataggacaaatgaattggacaagtcttgtgcttgtattgtatattttcttacaaatagaagtataataa 55385246  T
Q  523 ttgcaaacattttcttgagctagtttagctggttgcatttccttctgacttcaccttgcatagttgtgagaacattgctagcagaaagcttaacaaatgc 622  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  55385245 ttgcaaacattttcttgagctagtttagctggttgcatttccttctgacttcaccttgaatatttgtgagaacattgctagcagaaagcttaacaaatgc 55385146  T
Q  623 agatgagaagttctcaaagaagtagctctgatccatagcaaacctcatgacaatgggtgcagttcgtggatctctagaaatgctcgagtcaatacc 718  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55385145 agatgagaagttctcaaagaagtagctctgatccatagcaaacctcatgacaatgggtgcagttcgtggatctctagaaatgctcgagtcaatacc 55385050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 122 - 366
Target Start/End: Complemental strand, 55385625 - 55385394
Alignment:
Q  122 taatcttaacagcttagtgatagagaacgagaggcaatatcttcatg-agtggggcctgtcatgaaatttgatgttttatttatgcaatatctatagttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55385625 taatcttaacagcttagtgatagagaacgagaggcaatatcttcatggagtggggcctgtcatgaaatttgatgttttatttatgcaatatctacagttt 55385526  T
Q  221 tgttagctgtaacaatctctttttgagtaatgttaataaccatcattccaacactctattttaaacactctttcttacgagtgaaatgtacgtaggtcac 320  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||              ||||||||||||||||||||||| |||||||||    
T  55385525 tgttagctgtaacaatctcattttgagtaatgttaataacgatcattccaaca--------------ctctttcttacgagtgaaatgtatgtaggtcac 55385440  T
Q  321 tccannnnnnnaaaatcatgttgatttacatacatttgcaccatac 366  Q
    ||||       |||||||||||||||||||||||||||||||||||    
T  55385439 tccatttttttaaaatcatgttgatttacatacatttgcaccatac 55385394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 17619146 - 17619250
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  17619146 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaac 17619245  T
Q  115 atttt 119  Q
    |||||    
T  17619246 atttt 17619250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 32728463 - 32728354
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||| |||| |||||||||| |||| ||||||||||||||| | ||||||||||||    
T  32728463 gagatgaaagagaaagtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaac 32728364  T
Q  115 atttttctaa 124  Q
    ||||| ||||    
T  32728363 attttcctaa 32728354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 712066 - 711962
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||| ||||||||||||||||||||||  ||| |||| ||| |||||| |||| ||||||||||||||| ||||||||||||||    
T  712066 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaac 711967  T
Q  115 atttt 119  Q
    |||||    
T  711966 atttt 711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 48435573 - 48435673
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  48435573 gagatgaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaac 48435672  T
Q  115 a 115  Q
    |    
T  48435673 a 48435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 55272370 - 55272474
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||| |||| | ||||||||||||| | ||||||||||||    
T  55272370 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaac 55272469  T
Q  115 atttt 119  Q
    |||||    
T  55272470 atttt 55272474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 27893843 - 27893945
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||||||||    
T  27893843 aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc 27893942  T
Q  122 taa 124  Q
    |||    
T  27893943 taa 27893945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 3756242 - 3756349
Alignment:
Q  16 agatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaaca 115  Q
    |||||||||| |||||||| ||||||||| ||||||| ||||  ||| |||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  3756242 agatgaaaga-aaagtatgattgtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaaca 3756340  T
Q  116 tttttctaa 124  Q
    |||||||||    
T  3756341 tttttctaa 3756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 27864658 - 27864566
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||||||    
T  27864658 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27864566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 46827700 - 46827804
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||| | |||| ||| |||||| |||| | ||||||||||||| ||||||||||||||    
T  46827700 gagatgaaagagaaaatatgtttgtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaac 46827799  T
Q  115 atttt 119  Q
    |||||    
T  46827800 atttt 46827804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 28988572 - 28988475
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||| ||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| ||||||||| |||| |||||||||||||||||||    
T  28988572 aagagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacatttt 28988475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 960864 - 960968
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||| | || | ||||||||||||||||| |||||||||  || |||||| |||| | ||||||||||||| ||||||||||||||    
T  960864 gagatgaaagagaaagtacgattataagatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaac 960963  T
Q  115 atttt 119  Q
    |||||    
T  960964 atttt 960968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 35037111 - 35037004
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||| |||||| ||| |||||||||||||||||||||||||||  ||| |||| |||||||||| |||| | ||||||| ||||| |||| |||||||||    
T  35037111 gagaagaaagaaaaaatatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaac 35037012  T
Q  115 atttttct 122  Q
    ||||||||    
T  35037011 atttttct 35037004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 38851619 - 38851513
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||| |||| || |  | |||||||||||| | | ||||||||||    
T  38851619 gagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaac 38851520  T
Q  115 atttttc 121  Q
    |||||||    
T  38851519 atttttc 38851513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 48463456 - 48463554
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttctaat 125  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||| ||| |||||   ||||||| ||||||||||| |||||||||||| |||||    
T  48463456 aaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcctaat 48463554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 31681001 - 31680898
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||| | ||||||| ||||||  ||||||| ||||||||||| | ||||||||||||    
T  31681001 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttttc 31680902  T
Q  122 taat 125  Q
    ||||    
T  31680901 taat 31680898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 1771278 - 1771364
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||||||||| ||| |||||  || |||||||||||||||| |||||||||||| || |||| |||||||||||||||||||    
T  1771278 tggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 1771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 55966358 - 55966444
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||||||||| |||||||||  ||||||||||||||| ||| ||||||| ||||||| |||| |||||| ||||||||||||    
T  55966358 tggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 55966444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 19880060 - 19879987
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggt 88  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||| |||| ||||    
T  19880060 gagatgaaagagaaagtatgattgtgagatgaatttaccaaaatgtccataatatatggggtgtacaatagggt 19879987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 36004110 - 36004173
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgt 78  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||    
T  36004110 gagatgaaagagaaagtatggttgtgagataaatttatcaaaatgtccctaatatatggggtgt 36004173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 25051792 - 25051695
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| || |||||||||||| |||||||||  |||||||||||| |||||| |||||||||||| || ||||  |||||||||| |||||||    
T  25051792 aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacatttt 25051695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 27550408 - 27550311
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||| ||||||| |||||||||  ||||||||||||| ||||| |||||| |||||  | |||| |||||||||||||||||||    
T  27550408 aagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacatttt 27550311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 33703240 - 33703143
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||  | ||||  | |||| |||||||||||||||||||    
T  33703240 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacatttt 33703143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 43514698 - 43514787
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttct 122  Q
    ||||||||||||||| |||||||||   ||||||||||||  |||| |||||| ||||| || |||| ||||||||||||||||||||||    
T  43514698 tggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttttct 43514787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 43949802 - 43949902
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatg-attaaatggtgttcatgtaacattttt 120  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||| | | || ||| |||||||||||| |||||||    
T  43949802 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcattttt 43949901  T
Q  121 c 121  Q
    |    
T  43949902 c 43949902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 41327544 - 41327643
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||||||||| ||| ||||||||||||||||||||| |||| || | |||  ||||| ||||||||||| ||| |||| |||||  ||||||||||||||    
T  41327544 aagagaaagtgtggatgtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttttc 41327643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 28982835 - 28982920
Alignment:
Q  34 ggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||||||| |||||||||  ||||||||| ||||| ||| |||| |||||||  | |||| |||||||||||||||||||    
T  28982835 ggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacatttt 28982920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 35017831 - 35017735
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||| |||||||||||| ||||| | | || || |||| |||||||||||||||||||    
T  35017831 aagataaagtgtggttgtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacatttt 35017735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 41848070 - 41847973
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||| |||||||| ||||||||| |||||| ||| ||||| |||||||||| ||||| ||||| |||  ||| | ||||| |||||||||||    
T  41848070 aagagaaagtgtggttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacatttt 41847973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 41878505 - 41878408
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||| || ||||||||||||||| ||| |||||  ||||||||  || |||||| ||||| ||||||||| ||||  ||||||||||||||||||    
T  41878505 aagagaaggtttggttgtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacatttt 41878408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 45490314 - 45490411
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| |||||||||||||||||||| |||   ||||||||||||| ||||| |||| || ||||| | ||||  ||||||||||||||||||    
T  45490314 aagataaagtgtggttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacatttt 45490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 39631200 - 39631100
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatg-attaaatggtgttcatgtaacattttt 120  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||| ||||| ||||| |||||| | || ||| || ||||||||| |||||||    
T  39631200 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcattttt 39631101  T
Q  121 c 121  Q
    |    
T  39631100 c 39631100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 12497055 - 12496958
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| || |||| ||||||| |||||||||  || |||||||||||| ||| |||||| ||||| || |||| ||||||||| |||||||||    
T  12497055 aagataaagtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacatttt 12496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 23036079 - 23035982
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  ||||||||| || |||||| |||| ||||||| || |||| |  ||||||||||||||||    
T  23036079 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacatttt 23035982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 27316714 - 27316811
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||| ||||||||| |||||||||  ||| |||||||||||||||  |||| |||||| || |||| ||||||| | |||||||||    
T  27316714 aagataaagtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacatttt 27316811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 23204779 - 23204875
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacattt 118  Q
    |||| ||||| ||||||||| ||||| |||| ||||  |||||||||||| || ||| ||||||| |||| || ||||  |||||||||||||||||    
T  23204779 aagataaagtgtggttgtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 49229684 - 49229767
Alignment:
Q  41 agatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttctaa 124  Q
    |||||||||||||| ||  ||| |||| ||||  |||| |||| ||||||||||||||| | ||||||| ||||||||| ||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcctaa 49229767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 30189324 - 30189275
Alignment:
Q  70 atggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||| | |||| |||| ||| ||||||||||||||||||||||||    
T  30189324 atggggtgtacgatggagtgtgtgaataaatggtgttcatgtaacatttt 30189275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 36004165 - 36004202
Alignment:
Q  82 atggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  36004165 atggggtgtatgattaaagggtattcatgtaacatttt 36004202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 35181622 - 35181518
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  35181622 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 35181523  T
Q  115 atttt 119  Q
    |||||    
T  35181522 atttt 35181518  T

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Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 34304894 - 34304790
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||| ||||||||||||||| | ||||||||||||    
T  34304894 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaac 34304795  T
Q  115 atttt 119  Q
    |||||    
T  34304794 atttt 34304790  T

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Target: chr8; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 33629987 - 33630094
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||| ||||||||||||| |||| |||| ||||||||| ||| |||||| ||||| |||||||||||||| ||||||| ||||||    
T  33629987 gagatgaaagagaaagtatagttgtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaac 33630086  T
Q  115 atttttct 122  Q
    ||||||||    
T  33630087 atttttct 33630094  T

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Target: chr8; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 18066712 - 18066821
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||| ||| |||| |  |||||||||||| ||||||||||||||    
T  18066712 gagatgaaagagaaagtatggttgtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaac 18066811  T
Q  115 atttttctaa 124  Q
    ||||| ||||    
T  18066812 attttcctaa 18066821  T

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Target: chr8; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 29800951 - 29801052
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||||||||    
T  29800951 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc 29801050  T
Q  122 ta 123  Q
    ||    
T  29801051 ta 29801052  T

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Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 42197436 - 42197538
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| | ||||||||||||||||| || |||||||||||||||||||||||| |    
T  42197436 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T
Q  122 taa 124  Q
    |||    
T  42197536 taa 42197538  T

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Target: chr8; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 16603620 - 16603724
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||  |||| ||||||||||  |||  |||||||||||||| ||||| ||||||||    
T  16603620 gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaac 16603719  T
Q  115 atttt 119  Q
    |||||    
T  16603720 atttt 16603724  T

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Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 42295294 - 42295194
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||||| |||| ||||| |||||| || |||| |||||||||||||||||||||    
T  42295294 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttttc 42295195  T
Q  122 t 122  Q
    |    
T  42295194 t 42295194  T

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Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 11582865 - 11582768
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  11582865 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 11582768  T

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Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 29705461 - 29705364
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| ||| |||||  ||||||||||||||||||| ||||||||||||  | |||| |||||||||||||||||||    
T  29705461 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacatttt 29705364  T

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Target: chr8; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 36743484 - 36743581
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  36743484 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 36743581  T

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Target: chr8; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 20148854 - 20148758
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttcta 123  Q
    ||||| ||||||||||||||| |||||||||  ||||||||| ||| ||||| ||||||| ||||||| |||| |||||| ||||||||||||||||    
T  20148854 aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttcta 20148758  T

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Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 10678146 - 10678209
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  10678146 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgt 10678209  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 26125734 - 26125635
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||  ||||||| |||| |||||| ||||||||||||||    
T  26125734 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttttc 26125635  T

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Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 1375641 - 1375544
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| | |||||||||| ||||||||||||  ||||||||| ||||||||| |||| |||||||||| |||| ||||||||||||| |||||    
T  1375641 aagataaagtgtagttgtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaatttt 1375544  T

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Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 2165964 - 2166061
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||| ||||||||| |||||||||  || |||||||||||||| | |||||||||||| || |||||||||||||||||| |||||    
T  2165964 aagataaagtgtggttatgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatatttt 2166061  T

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Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 5755002 - 5754905
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||| ||||| ||| ||||||| |||| || |||| |||||||||||||||||||    
T  5755002 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacatttt 5754905  T

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Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 16358827 - 16358932
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttc-atgtaa 113  Q
    ||||||||| ||||||||||||||||||||||||||| |||||  | | |||| |||||| ||| |||| ||||||||||||||| ||| ||| ||||||    
T  16358827 gagatgaaaaagaaagtatggttgtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaa 16358926  T
Q  114 catttt 119  Q
    ||||||    
T  16358927 catttt 16358932  T

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Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 30912575 - 30912662
Alignment:
Q  34 ggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||||||||||||| |||||||||   ||||||||||||  |||| |||||||||||| || |||| |||||||||||||||||||||    
T  30912575 ggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttttc 30912662  T

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Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 42699351 - 42699256
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttct 122  Q
    ||||| ||||||||||||||| |||| ||||  ||| ||||||||  ||||| |||||||||||| || |||| ||||||||||||||||||||||    
T  42699351 aaagtgtggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttttct 42699256  T

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Target: chr8; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 30660743 - 30660840
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||| ||||||| |||||||||  |||||||||||| |||||| ||||||| ||||  | |||| |||||||||||||||||||    
T  30660743 aagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacatttt 30660840  T

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Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 40528635 - 40528726
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatg-attaaatggtgttcatgta 112  Q
    |||||||||| |||||||||||| |||||| ||||| |||||||||| ||||||||| ||||||||| | || || ||| ||||||||||||    
T  40528635 aagagaaagtgtggttgtgagataaatttatcaaaatgtccctaatatatggggtgtacaatggggtttgtgaataaaagggtgttcatgta 40528726  T

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Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 2547095 - 2546989
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||| ||||  ||||||||||||| ||||| |||||| |||||  | ||||  |||||||||||||||||| |    
T  2547095 aagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 2546996  T
Q  122 taatctt 128  Q
    || ||||    
T  2546995 tattctt 2546989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 45397404 - 45397318
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||||||||| |||| ||||  |||||||||||| ||||||  ||||||||||| || |||| |||||||| ||||||||||    
T  45397404 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacatttt 45397318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 31384763 - 31384672
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaa 113  Q
    |||| ||||| ||||||||||||||| |||||||||  | ||||||||||||||||| |||| |  |||| || |||| |||||||||||||    
T  31384763 aagataaagtgtggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaa 31384672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 19386559 - 19386668
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatg-----gggtgtgcaatggggtgtatgattaaatggtgttcat 109  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| | | |||| ||||     |   ||  ||| ||||||||||||||| |||||||||    
T  19386559 gagatgaaagagaaagtatagttgtgagatgaatttatcaaaacattcttaatgcatgaaagagaaagtataatagggtgtatgattaaagggtgttcat 19386658  T
Q  110 gtaacatttt 119  Q
    ||||||||||    
T  19386659 gtaacatttt 19386668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 10678201 - 10678238
Alignment:
Q  82 atggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  10678201 atggggtgtatgattaaagggtattcatgtaacatttt 10678238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 1e-37; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 33242509 - 33242405
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  33242509 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaac 33242410  T
Q  115 atttt 119  Q
    |||||    
T  33242409 atttt 33242405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 27441648 - 27441542
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| || ||| |||| ||||||||||||||| ||||||||||||||    
T  27441648 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaac 27441549  T
Q  115 atttttc 121  Q
    |||||||    
T  27441548 atttttc 27441542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 33254013 - 33253915
Alignment:
Q  21 aaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||| |||||||| |||||||||||||||||||| | ||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  33254013 aaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacatttt 33253915  T

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Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 24203993 - 24204087
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    ||||| ||||||||||||||| |||||||||  |||||||||||||| |||| |||| ||||||| || ||||||||||||||||||||||||||    
T  24203993 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttttc 24204087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 13743222 - 13743319
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||| || ||||||| |||| |||||||||||||||||||    
T  13743222 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacatttt 13743319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 13748722 - 13748819
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||| || ||||||| |||| |||||||||||||||||||    
T  13748722 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacatttt 13748819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 3213499 - 3213402
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||||||||||||| |||||||||||||||  ||| ||||||||||||||| ||||| | ||||||| |||| |||||| ||||||||||||    
T  3213499 aagataaagtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacatttt 3213402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 7292846 - 7292749
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| ||||||  |||| ||||||||| |||||||||||| |||||||||||    
T  7292846 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacatttt 7292749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 9698334 - 9698431
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  9698334 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 9698431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 21280028 - 21279931
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| |||||||||||||||||||||||||  ||||||||||||||| ||||||||||  ||||  | |||| |||||||||||||||||||    
T  21280028 aagataaagtgtggttgtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacatttt 21279931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 26670010 - 26670107
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||| ||||| ||||| |||||| || |||| |||||||||||||||||||    
T  26670010 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 26670107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 7367643 - 7367551
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||||| ||| ||||| ||||||||| |||||| ||||||| |||||||||    
T  7367643 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacatttt 7367551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 26466898 - 26466801
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||   ||||||||||||| |||| |||||||||||| || |||| |||||| ||||||||||||    
T  26466898 aagataaagtgtggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacatttt 26466801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 30014442 - 30014345
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||||||||||||||||||| |||||||||  | ||||||||||||| |||  |||||| |||| || |||| |||||||||||||||||||    
T  30014442 aagataaagtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacatttt 30014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 30736081 - 30735981
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| || |||||||||||| |||||||||  || |||||||||| ||||| |||||||||||| || ||||  ||||||||||||||||||||    
T  30736081 aagataaagtgtgattgtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttttc 30735982  T
Q  122 t 122  Q
    |    
T  30735981 t 30735981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 31109216 - 31109320
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||| | |||| || || |||||||| |||||  |||||| | ||||||||||  |||||| |||||||||||| ||||||||||||||    
T  31109216 gagatgaaagagaaaatgtggtcgtaagttgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaac 31109315  T
Q  115 atttt 119  Q
    |||||    
T  31109316 atttt 31109320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 7273336 - 7273433
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| || |||||||||||| |||||||||  || |||||||||||||||| ||||  |||||| || |||| |||||||||||||||||||    
T  7273336 aagataaagtgtgattgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacatttt 7273433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 21293678 - 21293775
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||| |||||||||||||||  ||| ||||||||||||||| || ||   ||||||| |||| |||||| ||||||||||||    
T  21293678 aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacatttt 21293775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 1e-37; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 43114663 - 43114559
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  43114663 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 43114564  T
Q  115 atttt 119  Q
    |||||    
T  43114563 atttt 43114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 11825648 - 11825754
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  11825648 gagatgaaagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 11825747  T
Q  115 atttttc 121  Q
    |||||||    
T  11825748 atttttc 11825754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 41281968 - 41282074
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  41281968 gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 41282067  T
Q  115 atttttc 121  Q
    |||||||    
T  41282068 atttttc 41282074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 966828 - 966932
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  966828 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 966927  T
Q  115 atttt 119  Q
    |||||    
T  966928 atttt 966932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 12415454 - 12415558
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||  |||||||||||||| ||||||||||||||    
T  12415454 gagatgaaagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaac 12415553  T
Q  115 atttt 119  Q
    |||||    
T  12415554 atttt 12415558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 12427514 - 12427618
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||  |||||||||||||| ||||||||||||||    
T  12427514 gagatgaaagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaac 12427613  T
Q  115 atttt 119  Q
    |||||    
T  12427614 atttt 12427618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 16804074 - 16803970
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  16804074 gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaac 16803975  T
Q  115 atttt 119  Q
    |||||    
T  16803974 atttt 16803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 16843356 - 16843252
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||| ||| |||| ||||||||||||||| ||||||||||||||    
T  16843356 gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaac 16843257  T
Q  115 atttt 119  Q
    |||||    
T  16843256 atttt 16843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 18491811 - 18491707
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||| |||||||||||||||||||||||||||||| || | |||| |||| ||||| |||| ||||||||||||||| ||||||||||||||    
T  18491811 gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaac 18491712  T
Q  115 atttt 119  Q
    |||||    
T  18491711 atttt 18491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 34895735 - 34895835
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  34895735 gagatgaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaac 34895834  T
Q  115 a 115  Q
    |    
T  34895835 a 34895835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 4299414 - 4299520
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||| |||||| ||||||| |||||||||||||||||||||| |||  |||| ||||| |||| |||| ||||||||||||||| ||||||||| ||||    
T  4299414 gagattaaagagtaagtatgattgtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataac 4299513  T
Q  115 atttttc 121  Q
    |||||||    
T  4299514 atttttc 4299520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 6518484 - 6518571
Alignment:
Q  36 ttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttctaa 124  Q
    |||||||||||| ||||||||| ||||||||| |||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||    
T  6518484 ttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttttctaa 6518571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 1750513 - 1750416
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  |||||||||||| |||||| |||||||||||| || |||| |||||||||||||||||||    
T  1750513 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 1750416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 34817777 - 34817874
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||| ||||||||||||||||||||||||| || | || | |||||||||| ||||| ||||| ||| |||| |||||||||||||||||||    
T  34817777 aagagaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacatttt 34817874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 4764727 - 4764824
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| |||||||||||||||||||||||||  |   ||||||||||||||| |||| ||||||| || ||||||||||| ||||||||||||    
T  4764727 aagataaagtgtggttgtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacatttt 4764824  T

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Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 12302254 - 12302351
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  |||||||||||| |||||| ||||||||||||  | |||| |||||||||||||||||||    
T  12302254 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacatttt 12302351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 16096846 - 16096749
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| |||||||||||| || | |||||||  |||||||||||||||||||  ||||||||||| || |||| |||||||||||||||||||    
T  16096846 aagataaagtgtggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacatttt 16096749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 19047256 - 19047159
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||  |||| || |||| |||||||||||||||||||    
T  19047256 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt 19047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 43490402 - 43490503
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||| ||||||||| |||||||||  |||||||||||| | |||| ||||||| |||| || |||| |||||||||||||||||||||    
T  43490402 aagataaagtgtggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttttc 43490501  T
Q  122 ta 123  Q
    ||    
T  43490502 ta 43490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 12531657 - 12531740
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || |||| | || ||||| |||| |||||||||||||||    
T  12531657 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaa-gcccataatgcttgaggtgtacaattgggtgtatgattaaa 12531740  T

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Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 4451944 - 4452026
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgatta 97  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||| ||||  | ||||||||||    
T  4451944 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccctaatgcatatggtgtacaataagatgtatgatta 4452026  T

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Target: chr2; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 13780736 - 13780833
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||| ||||||||||||||||||| |||||  ||||||||  ||||||||| ||||| ||||| ||| ||||  ||||| ||||||||||||    
T  13780736 aagagaaagtgtggttgtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacatttt 13780833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 14285782 - 14285673
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||  | |||||||||||||||||||  ||  ||||| || |||||| |||| ||||||||||||||| ||||||  |||||     
T  14285782 gagatgaaagagaaagtatgactctgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaat 14285683  T
Q  115 atttttctaa 124  Q
    ||||| ||||    
T  14285682 attttcctaa 14285673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 30838731 - 30838634
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||  | ||||  | |||| |||||||||||||||||||    
T  30838731 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacatttt 30838634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 43335764 - 43335861
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| | ||||||||||||| |||||||||  ||||||||||||||| ||| ||||| |||||| || |||||| ||||||| |||||||||    
T  43335764 aagataaagtgtagttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacatttt 43335861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 7070504 - 7070416
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    ||||||| ||||||||||| ||||| ||||| |||| |||| |  | ||||||| ||||||| |||| |||||||||||||||||||||    
T  7070504 tggttgtaagatgaatttatcaaaatgtccccaataaatggaggttacaatgggatgtatgaataaagggtgttcatgtaacatttttc 7070416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 8896587 - 8896685
Alignment:
Q  25 agaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttcta 123  Q
    ||||||| || ||||||||||||||||||||||  | |||| |  || |||||| ||||||  ||| ||| |||| |||||||||||||||||||||||    
T  8896587 agaaagtgtgattgtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttttcta 8896685  T

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Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 33229381 - 33229300
Alignment:
Q  42 gatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatg-attaaatggtgttcatgtaacatttttct 122  Q
    |||||| |||||||||  ||||||||||||||||||| ||||| |||||| | || ||| |||||||||||| |||||||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttttct 33229300  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 42026865 - 42026769
Alignment:
Q  25 agaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaat--ggtgttcatgtaacatttt 119  Q
    ||||||| | |||||||||||||||| ||||||  |||||||| |  ||| ||| ||||||  ||||||| |||||  |||||||||||||||||||    
T  42026865 agaaagtgtagttgtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacatttt 42026769  T

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Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 42849864 - 42849915
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgt 78  Q
    ||||| ||||||||||||||| ||| |||||  |||||||||||||||||||    
T  42849864 aaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgt 42849915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 1e-37; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 44112783 - 44112679
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  44112783 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 44112684  T
Q  115 atttt 119  Q
    |||||    
T  44112683 atttt 44112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 48119734 - 48119630
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  48119734 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 48119635  T
Q  115 atttt 119  Q
    |||||    
T  48119634 atttt 48119630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 35003400 - 35003296
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| ||||  ||||||||| |||| ||||||||||||||| ||||||||||||||    
T  35003400 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 35003301  T
Q  115 atttt 119  Q
    |||||    
T  35003300 atttt 35003296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 45427739 - 45427843
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||| |||| ||||||||||||||| ||| ||||||||||    
T  45427739 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaac 45427838  T
Q  115 atttt 119  Q
    |||||    
T  45427839 atttt 45427843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 38113189 - 38113299
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||  |||| |||||||||| |||| ||||||||||||||| ||||||||| ||||    
T  38113189 gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataac 38113288  T
Q  115 atttttctaat 125  Q
    ||||| |||||    
T  38113289 attttcctaat 38113299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 41065259 - 41065150
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||| |||||||||||||||||||||||||||| ||||||||| | ||||||| |||||||||| |||  ||||||||||||||| ||||||||||||||    
T  41065259 gagaggaaagagaaagtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaac 41065160  T
Q  115 atttttctaa 124  Q
    ||||| ||||    
T  41065159 attttcctaa 41065150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 38336024 - 38335920
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||| ||| ||||  |||||||||||||| ||||||||||||||    
T  38336024 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaac 38335925  T
Q  115 atttt 119  Q
    |||||    
T  38335924 atttt 38335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 35000107 - 35000211
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||  || | |||| | ||||||||||||| ||||||||||||||    
T  35000107 gagatgaaagagaaagtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaac 35000206  T
Q  115 atttt 119  Q
    |||||    
T  35000207 atttt 35000211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 46168489 - 46168385
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||| ||| |||||| |||| || | |||||||||| ||||||||||||||    
T  46168489 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaac 46168390  T
Q  115 atttt 119  Q
    |||||    
T  46168389 atttt 46168385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 45705931 - 45705822
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||| |||| |||| |  |||||||||||| ||||||||| ||||    
T  45705931 gagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataac 45705832  T
Q  115 atttttctaa 124  Q
    ||||| ||||    
T  45705831 attttcctaa 45705822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 45639726 - 45639830
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||| ||||||||||||||||||||||  ||| ||||  ||||||||| |||| || ||||||||||||  |||||||||||||    
T  45639726 gagatgaaagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaac 45639825  T
Q  115 atttt 119  Q
    |||||    
T  45639826 atttt 45639830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 43571087 - 43571184
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||| || |||| |||||||||||||||||||    
T  43571087 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 43571184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 2497568 - 2497665
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttctaa 124  Q
    ||||| ||||||||||||||| |||||||||  ||| ||||| ||||||||| ||||||  ||||||| ||||||||||| |||||||||||||||||    
T  2497568 aaagtgtggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttttctaa 2497665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 5489875 - 5489778
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  5489875 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 5489778  T

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Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 37814877 - 37814780
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||| |||||||||||||||  ||| ||||||||||||||| ||||| | ||||||| |||| |||||| ||||||||||||    
T  37814877 aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacatttt 37814780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 48498963 - 48499060
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||| ||||| |||||| |||||  | ||||  ||||||||||||||||||    
T  48498963 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt 48499060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 26585568 - 26585464
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||  ||| |||| |||||||||| ||||   |||||||||||||   ||||||| ||||    
T  26585568 gagatgaaagagaaagtatgattgcgagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaac 26585469  T
Q  115 atttt 119  Q
    |||||    
T  26585468 atttt 26585464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 4401427 - 4401325
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatg-gtgttcatgtaacattttt 120  Q
    |||| ||||| ||||||||||||||| |||||||||  || |||||||||||||||| |||||  ||||| || |||| | ||||||||||| |||||||    
T  4401427 aagataaagtgtggttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcattttt 4401328  T
Q  121 cta 123  Q
    |||    
T  4401327 cta 4401325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 23989524 - 23989622
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatg-attaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| |||||||||||| ||||||||||||  |||||||||||| |||| | |||| | ||||||| || ||| |||||||||||||||||||    
T  23989524 aagataaagtgtggttgtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacatttt 23989622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 750306 - 750403
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||| ||||||||||||| |||||  ||||| ||||||||||||| |||||||||||| ||   || |||||||| ||||||||||    
T  750306 aagataaagtgtggttttgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacatttt 750403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 24769500 - 24769597
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||| | ||| |||||||||  ||||||||||||||||||| |||||| |||||  | |||| |||||||||| ||||||||    
T  24769500 aagataaagtgtggttgtgataagaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacatttt 24769597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 7447924 - 7447826
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| ||| |||||  ||  ||||||||||| ||| ||||||| |||| || |||| | |||||||||||||||||||    
T  7447924 aagataaagtgtggttgtgagatgaacttatcaaaatatctgtaatacatggg-tgtacaatgggatgtaggaataaaggatgttcatgtaacatttttc 7447826  T

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Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 14427404 - 14427349
Alignment:
Q  64 taatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| |||| ||||| |||| ||||||||||||||| |||||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 14427349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 50448272 - 50448358
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||| ||||||| |||| ||||  ||||||||||||  ||||| |||||| |||||  | ||||  ||||||||||||||||||    
T  50448272 tggttgtaagatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt 50448358  T

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Target: scaffold0100 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 35450 - 35554
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| ||||  ||||||||||||||||||||| |||||||    
T  35450 gagatgaaagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaac 35549  T
Q  115 atttt 119  Q
    |||||    
T  35550 atttt 35554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 9434230 - 9434126
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||| | ||||||||||||| ||||||||||||||    
T  9434230 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaac 9434131  T
Q  115 atttt 119  Q
    |||||    
T  9434130 atttt 9434126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 4190259 - 4190363
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  || |||||||||  ||||| |||| ||||||||||||||| ||||||||||||||    
T  4190259 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaac 4190358  T
Q  115 atttt 119  Q
    |||||    
T  4190359 atttt 4190363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 10457886 - 10457990
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||| |||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  10457886 gagatgaaagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaac 10457985  T
Q  115 atttt 119  Q
    |||||    
T  10457986 atttt 10457990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 25996374 - 25996265
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||  | |||||||||||| ||||||||||||||    
T  25996374 gagatgaaagagaaaatatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaac 25996275  T
Q  115 atttttctaa 124  Q
    ||||| ||||    
T  25996274 attttcctaa 25996265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 40808964 - 40808867
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||    
T  40808964 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacatttt 40808867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 34791935 - 34791831
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| |||  |||| ||||||||| |||| ||| | ||||  |||||||||||||| ||||||||||||||    
T  34791935 gagatgaaagagaaagtatggttgtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaac 34791836  T
Q  115 atttt 119  Q
    |||||    
T  34791835 atttt 34791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 51757699 - 51757595
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||| |||| |||| ||||| |||| ||||||||||||||| |||||| ||||||     
T  51757699 gagatgaaagagaaagtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaat 51757600  T
Q  115 atttt 119  Q
    |||||    
T  51757599 atttt 51757595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 45126934 - 45127026
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||| |||| |||||| ||||||||||||    
T  45126934 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 45127026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 52627972 - 52628075
Alignment:
Q  16 agatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaaca 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | | |||| |||| ||||| |||| || |||||||||||| |||||||| ||||||    
T  52627972 agatgaaagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaaca 52628071  T
Q  116 tttt 119  Q
    ||||    
T  52628072 tttt 52628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 42100776 - 42100690
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||| || |||| |||||||||||||||||||    
T  42100776 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42100690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 46941152 - 46941055
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||| | |||| || |||| |||||||||||||||||||    
T  46941152 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 46941055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 54237195 - 54237098
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  54237195 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 54237098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 27748662 - 27748563
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||||| ||||||||||||| |||||||||  ||||||||||||  |||||  |||| ||||||||| |||| |||||||||||||||||||||    
T  27748662 aagataaagtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttttc 27748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 53273684 - 53273782
Alignment:
Q  21 aaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||| ||||||||||||||||||||| |||||||||  ||||||||||||||| ||| ||||| ||| || || |||||| ||||||| |||||||||    
T  53273684 aaagataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacatttt 53273782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 24688403 - 24688500
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| |||||| |||||  | |||| |||||||||||||||||||    
T  24688403 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacatttt 24688500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 25413780 - 25413683
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  ||||||||||||  ||||| |||||||||||| || |||| |||||||||||||||||||    
T  25413780 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 25413683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 36150229 - 36150132
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||| |||||| ||||||  |||||||||||||| |||| ||| |||||||||||||||    
T  36150229 aagataaagtgtggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacatttt 36150132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 40480848 - 40480751
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| || ||| ||||||||  ||||| |||| |||||||||||||||||||    
T  40480848 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacatttt 40480751  T

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Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 42394420 - 42394517
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||  |||| || |||| |||||||||||||||||||    
T  42394420 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt 42394517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 53581859 - 53581960
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| ||| |||||  |||||||||||| || ||| |||||| |||||||| ||||  ||||||||||||||||||||    
T  53581859 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttttc 53581958  T
Q  122 ta 123  Q
    ||    
T  53581959 ta 53581960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 54246149 - 54246246
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  || ||||||||| |||||| |||||||||||| || |||| |||||||||||||||||||    
T  54246149 aagataaagtgtggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 54246246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 47191027 - 47191123
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| ||| |||||  || |||||||||||| ||| ||||| |||||| || |||| |||||||||||||||||||    
T  47191027 aagataaagtgtggttgtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 47191123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 19148883 - 19148821
Alignment:
Q  17 gatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtg 79  Q
    |||||||| |||||| || ||||||||| ||||||| |||| ||||||||||||| |||||||    
T  19148883 gatgaaagtgaaagtgtgattgtgagataaatttactaaaatgtccctaatacatagggtgtg 19148821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 29558249 - 29558330
Alignment:
Q  36 ttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatt 117  Q
    |||||||||||||||||||| |  | ||||||| || |||||| ||||| | ||||||| |||| ||||||||| |||||||    
T  29558249 ttgtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacatt 29558330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 51249407 - 51249351
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgt 78  Q
    |||||||||| |||||||||||||||||||||||||  ||| |||| |||| |||||    
T  51249407 aagagaaagtgtggttgtgagatgaatttaccaaaatatccttaatgcatgaggtgt 51249351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 45713 - 45819
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| || ||| |||| ||||||||||||||| ||||||||||||||    
T  45713 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaac 45812  T
Q  115 atttttc 121  Q
    |||||||    
T  45813 atttttc 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-33; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 40237025 - 40236921
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||| |||| || |||||||||||| ||||||||||||||    
T  40237025 gagatgaaagagaaaatatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaac 40236926  T
Q  115 atttt 119  Q
    |||||    
T  40236925 atttt 40236921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 33384977 - 33384872
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaat-ggggtgtatgattaaatggtgttcatgtaa 113  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||||||||||||| |||||||||||    
T  33384977 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaa 33384878  T
Q  114 catttt 119  Q
    ||||||    
T  33384877 catttt 33384872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 31513393 - 31513289
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||| | |||| |||||||||||||||  |||||||||||||    
T  31513393 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaac 31513294  T
Q  115 atttt 119  Q
    |||||    
T  31513293 atttt 31513289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 31408627 - 31408731
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||| |||| |||||| ||| |||| | ||||||||||||| ||||||||||||||    
T  31408627 gagatgaaagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaac 31408726  T
Q  115 atttt 119  Q
    |||||    
T  31408727 atttt 31408731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 27535225 - 27535329
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||  ||| |||||| |||| |||| | ||||||||||||| ||||||||||||||    
T  27535225 gagatgaaagagaaagtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaac 27535324  T
Q  115 atttt 119  Q
    |||||    
T  27535325 atttt 27535329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 4638200 - 4638301
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||||||||||||||||||| |||||||||  ||| ||||| ||||||||| |||| | |||||||| |||| |||||||||||||||||||||    
T  4638200 aagataaagtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttttc 4638299  T
Q  122 ta 123  Q
    ||    
T  4638300 ta 4638301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 10573848 - 10573749
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| |||||||||||||||||||||||||  | ||||||||||||||||| |||| || ||||||| |||| |||||| ||||||||||||||    
T  10573848 aagataaagtgtggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttttc 10573749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 24001013 - 24001110
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  24001013 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 24001110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 42538432 - 42538529
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  42538432 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 42538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 43343625 - 43343725
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| ||| |||||  ||||||||||||||||||| |||| |||||||  | |||||| |||||||||||||||||||    
T  43343625 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttttc 43343724  T
Q  122 t 122  Q
    |    
T  43343725 t 43343725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 44326272 - 44326176
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttcta 123  Q
    ||||| ||||||||||||||| |||||||||  ||||||||| ||| ||||| ||||||| ||||||| |||| |||||| ||||||||||||||||    
T  44326272 aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttcta 44326176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 44416935 - 44417034
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| ||| |||||  ||||||||||||||||||| |||| |||||||  | |||||| |||||||||||||||||||    
T  44416935 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttttc 44417034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 5194232 - 5194334
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    ||||| |||| || |||||||||||||||| |||||  ||| ||| |||| |||||| ||||| ||||||||| |||||||||||||||||||||||| |    
T  5194232 aagagtaagtgtgattgtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 5194331  T
Q  122 taa 124  Q
    |||    
T  5194332 taa 5194334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 35069820 - 35069718
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||| ||||| ||||| |||||| || ||||  |||||||||||||||||| |    
T  35069820 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcc 35069721  T
Q  122 taa 124  Q
    |||    
T  35069720 taa 35069718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 26898408 - 26898499
Alignment:
Q  27 aaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacattt 118  Q
    ||||| ||||||| ||||||| |||||||||  ||||||||||||||  ||| |||| |||||||||| |||| ||||||||||||||||||    
T  26898408 aaagtgtggttgtaagatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 32029818 - 32029908
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgta 112  Q
    |||| ||||| ||||||| |||||||||||||||||  ||||||||||||||||||| |||||||||||| || ||||  ||||| |||||    
T  32029818 aagataaagtgtggttgttagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 5015494 - 5015397
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||| ||||| |||||| |||||  | ||||  ||||||||||||||||||    
T  5015494 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt 5015397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 5810925 - 5811022
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| ||| |||||  ||||||||| || |||||| |||||||||||| || |||| |||| ||||||||||||||    
T  5810925 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacatttt 5811022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 16180358 - 16180458
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| |||||||||||||||||||||||||  |   |||||| |||||||| |||| ||||||| || ||||||||||| ||||||||||||||    
T  16180358 aagataaagtgtggttgtgagatgaatttaccaaaatatttataatacgtggggtgtacaat-gggtgtaggaataaatggtgttgatgtaacatttttc 16180456  T
Q  122 ta 123  Q
    ||    
T  16180457 ta 16180458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 43317542 - 43317445
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||| |||| || |||||||||||||||| |||||  |||||||  ||| || ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  43317542 aagagtaagtgtgattgtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacatttt 43317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 42972940 - 42972854
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||||||||| |||||||||  ||||||||||||| ||||| |||||| ||||| || |||| | |||||| ||||||||||    
T  42972940 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacatttt 42972854  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 45326119 - 45326026
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaaca 115  Q
    |||| ||||| || |||||||||||| |||||||||  ||||||||| ||||||||| ||||| | ||||||| |||| |||||| ||||||||    
T  45326119 aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaaca 45326026  T

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Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 39998469 - 39998410
Alignment:
Q  60 tccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||||||||||||| |||| || ||||||||||||  ||||||||||||||||||    
T  39998469 tccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacatttt 39998410  T

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Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 24280597 - 24280694
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||||||||| || ||||||||||||||||||||||  |  ||| | |||||| |||  ||| |||||||||| |||| |||||||| ||||||||||    
T  24280597 aagagaaagtgtgattgtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacatttt 24280694  T

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Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 41861775 - 41861676
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtcccta--atacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| |||||||||||| || |||||||||  || |||  |||||| ||||||  ||| |||||||||| |||| |||||||||||||||||||    
T  41861775 aagataaagtgtggttgtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacatttt 41861676  T

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Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 38160580 - 38160649
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgta 91  Q
    |||| ||||| | ||||||||||||| |||| ||||  ||||||||||||||||||| |||||| |||||    
T  38160580 aagataaagtgtagttgtgagatgaagttactaaaatatccctaatacatggggtgtacaatggagtgta 38160649  T

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Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 9216389 - 9216304
Alignment:
Q  33 tggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||||||||| |||||||||  || ||||| ||| |||||| |||| || | || || |||| |||||||||||||||||||    
T  9216389 tggttgtgagatgaacttaccaaaatatctctaatgcat-gggtgtacaataggatataggaataaagggtgttcatgtaacatttt 9216304  T

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Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 17208180 - 17208076
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||   ||||||||||||| |||||||| |||||    
T  17208180 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaac 17208081  T
Q  115 atttt 119  Q
    |||||    
T  17208080 atttt 17208076  T

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Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 32473388 - 32473492
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||| ||||| ||||  |||||||||||||| ||||||||||||||    
T  32473388 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaac 32473487  T
Q  115 atttt 119  Q
    |||||    
T  32473488 atttt 32473492  T

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Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 5257094 - 5256994
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||||||||    
T  5257094 aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc 5256995  T
Q  122 t 122  Q
    |    
T  5256994 t 5256994  T

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Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 7617232 - 7617135
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||||||||||  ||||| |||||||| |||| |||||||||||||||||||    
T  7617232 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacatttt 7617135  T

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Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 30622713 - 30622816
Alignment:
Q  15 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaac 114  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||| |||| |||||| | | |||| ||||||||||||||| | ||||||||||||    
T  30622713 gagatgaaagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaac 30622811  T
Q  115 atttt 119  Q
    |||||    
T  30622812 atttt 30622816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 2614650 - 2614747
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| || |||| |||||||||||||||||||    
T  2614650 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 2614747  T

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Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 22512404 - 22512307
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||||| |||| |||||| ||||| || |||| |||||||||||||||||||    
T  22512404 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 22512307  T

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Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 41334664 - 41334761
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| ||||||  |||| ||||||||| |||| |||||||||||||||||||    
T  41334664 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacatttt 41334761  T

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Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 18034081 - 18033984
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  |||||||||||| |||||| |||||| ||||| || |||| |||||||||||||||||||    
T  18034081 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 18033984  T

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Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 33855071 - 33855141
Alignment:
Q  49 ttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    ||||||||| || ||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||    
T  33855071 ttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 33855141  T

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Target: chr5; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 33801568 - 33801471
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  |||||||||||||| |||| ||||||||||||  | |||| | |||||||||||||||||    
T  33801568 aagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacatttt 33801471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 38470678 - 38470581
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| || |||||| |||||||||||||||  ||| ||||||||||||||| ||||||  ||||||| |||| |||||| ||||||||||||    
T  38470678 aagataaagtgtgattgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 38470581  T

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Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 25915029 - 25915087
Alignment:
Q  63 ctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttttc 121  Q
    ||||||||| |||||| ||||| |||||| || |||| |||||||||||||||||||||    
T  25915029 ctaatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttttc 25915087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 39122434 - 39122524
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaa 113  Q
    |||| ||||| | |||||||||||||||||||||||  | |||||||||| ||||||  |||  | ||||||| |||| |||||||||||||    
T  39122434 aagataaagtgtagttgtgagatgaatttaccaaaatattcctaatacat-gggtgtctaattagatgtatgaataaaaggtgttcatgtaa 39122524  T

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Target: scaffold0385 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 11350 - 11253
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||||| ||||  |||||||||| |||||||    
T  11350 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacatttt 11253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 784 - 687
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  ||||||||||||| ||||| ||||| |||||| || |||| |||||||||||||||||||    
T  784 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 112754 - 112657
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||||||||  |||||||||||| |||||| ||||||  |||| || |||| |||||||||||||||||||    
T  112754 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt 112657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 14189 - 14286
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  |||||||||||| || ||| ||||||||||||  | |||| |||||||||||||||||||    
T  14189 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacatttt 14286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 24517 - 24614
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| ||||||||||||||| |||| ||||  |||||||||||| || ||| ||||||||||||  | |||| |||||||||||||||||||    
T  24517 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacatttt 24614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 23422 - 23519
Alignment:
Q  22 aagagaaagtatggttgtgagatgaatttaccaaaacgtccctaatacatggggtgtgcaatggggtgtatgattaaatggtgttcatgtaacatttt 119  Q
    |||| ||||| || |||| ||||||| |||||||||  || |||||||||||| ||| |||||| ||||| || |||| ||||||||| |||||||||    
T  23422 aagataaagtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacatttt 23519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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