View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18453_high_55 (Length: 241)

Name: NF18453_high_55
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18453_high_55
NF18453_high_55
[»] chr3 (65 HSPs)
chr3 (17-197)||(43222847-43223030)
chr3 (108-197)||(49407796-49407885)
chr3 (108-196)||(36701106-36701194)
chr3 (110-196)||(36701554-36701640)
chr3 (119-196)||(40839110-40839187)
chr3 (108-196)||(44676472-44676560)
chr3 (121-196)||(27199715-27199790)
chr3 (108-196)||(40275093-40275181)
chr3 (110-194)||(52237277-52237361)
chr3 (108-196)||(52375789-52375877)
chr3 (108-194)||(46013422-46013508)
chr3 (110-196)||(52236818-52236904)
chr3 (119-196)||(40838663-40838740)
chr3 (108-196)||(330294-330382)
chr3 (108-196)||(33412612-33412700)
chr3 (108-188)||(47431696-47431776)
chr3 (108-196)||(50662870-50662958)
chr3 (108-196)||(50900985-50901073)
chr3 (108-196)||(51827957-51828045)
chr3 (108-196)||(52375327-52375415)
chr3 (119-194)||(2044282-2044357)
chr3 (108-190)||(25534890-25534972)
chr3 (108-194)||(49720371-49720457)
chr3 (119-196)||(22370607-22370684)
chr3 (108-193)||(41998689-41998774)
chr3 (121-189)||(37076139-37076207)
chr3 (108-196)||(40275552-40275639)
chr3 (121-196)||(43222403-43222478)
chr3 (121-194)||(16689371-16689444)
chr3 (108-181)||(27200164-27200237)
chr3 (119-196)||(34105108-34105185)
chr3 (119-196)||(44676930-44677007)
chr3 (119-196)||(55389616-55389693)
chr3 (108-196)||(14654647-14654735)
chr3 (108-196)||(43678295-43678383)
chr3 (108-196)||(49720819-49720907)
chr3 (108-188)||(49952012-49952092)
chr3 (108-196)||(51828539-51828627)
chr3 (108-196)||(55192118-55192206)
chr3 (108-196)||(55390055-55390143)
chr3 (121-188)||(8873703-8873770)
chr3 (109-196)||(37075687-37075774)
chr3 (129-196)||(37847277-37847344)
chr3 (108-194)||(51472855-51472941)
chr3 (135-196)||(8874144-8874205)
chr3 (119-196)||(32730400-32730477)
chr3 (119-196)||(49951557-49951634)
chr3 (108-196)||(2051295-2051383)
chr3 (108-196)||(16701250-16701338)
chr3 (108-196)||(38535309-38535397)
chr3 (108-184)||(39010075-39010151)
chr3 (133-189)||(39010486-39010542)
chr3 (108-196)||(41998229-41998317)
chr3 (108-196)||(43678742-43678830)
chr3 (121-188)||(30513735-30513802)
chr3 (109-183)||(49408252-49408326)
chr3 (119-196)||(329857-329934)
chr3 (119-196)||(12140948-12141024)
chr3 (119-196)||(51473314-51473391)
chr3 (108-196)||(38535753-38535841)
chr3 (108-196)||(51828416-51828504)
chr3 (121-183)||(2323392-2323454)
chr3 (108-189)||(23228472-23228552)
chr3 (108-196)||(12141149-12141237)
chr3 (108-188)||(14654199-14654279)
[»] chr2 (48 HSPs)
chr2 (119-196)||(20495204-20495281)
chr2 (119-196)||(28143487-28143564)
chr2 (108-196)||(31797235-31797323)
chr2 (108-196)||(42192701-42192789)
chr2 (108-196)||(11540096-11540184)
chr2 (108-196)||(42192240-42192328)
chr2 (121-196)||(33920625-33920700)
chr2 (108-196)||(4355755-4355843)
chr2 (108-196)||(38007950-38008038)
chr2 (108-196)||(44220103-44220191)
chr2 (119-194)||(2190536-2190611)
chr2 (121-196)||(43160022-43160097)
chr2 (108-194)||(14942306-14942392)
chr2 (108-194)||(25336060-25336146)
chr2 (119-196)||(9330253-9330330)
chr2 (108-196)||(649527-649615)
chr2 (108-196)||(6949902-6949990)
chr2 (108-196)||(32418604-32418692)
chr2 (108-196)||(43216167-43216255)
chr2 (111-196)||(63422-63507)
chr2 (119-196)||(15550684-15550761)
chr2 (119-196)||(16175808-16175885)
chr2 (108-196)||(4356214-4356302)
chr2 (132-196)||(4808903-4808967)
chr2 (108-196)||(5560051-5560139)
chr2 (108-196)||(16952935-16953023)
chr2 (108-196)||(17060906-17060994)
chr2 (108-196)||(20128195-20128283)
chr2 (108-196)||(24140132-24140220)
chr2 (108-196)||(38008409-38008497)
chr2 (150-196)||(5037156-5037202)
chr2 (109-194)||(16953394-16953479)
chr2 (108-196)||(32418159-32418245)
chr2 (108-201)||(33921065-33921158)
chr2 (108-196)||(62957-63045)
chr2 (111-183)||(3824179-3824251)
chr2 (108-196)||(11539637-11539725)
chr2 (108-196)||(20127736-20127824)
chr2 (108-196)||(43160469-43160557)
chr2 (146-196)||(13399460-13399510)
chr2 (108-194)||(44219644-44219730)
chr2 (108-189)||(6949451-6949532)
chr2 (119-196)||(13315504-13315581)
chr2 (119-183)||(9747532-9747596)
chr2 (110-189)||(649802-649881)
chr2 (108-196)||(4809337-4809425)
chr2 (148-196)||(5035903-5035951)
chr2 (120-176)||(5561018-5561074)
[»] chr1 (47 HSPs)
chr1 (119-196)||(17641827-17641904)
chr1 (119-194)||(29021325-29021400)
chr1 (110-196)||(50304441-50304527)
chr1 (119-196)||(25274767-25274844)
chr1 (119-196)||(39485076-39485153)
chr1 (121-196)||(50926243-50926318)
chr1 (110-196)||(10278550-10278636)
chr1 (119-192)||(23526669-23526742)
chr1 (108-201)||(29438930-29439023)
chr1 (108-196)||(17088597-17088685)
chr1 (108-196)||(44802629-44802717)
chr1 (119-196)||(44291312-44291389)
chr1 (108-196)||(1837505-1837593)
chr1 (108-196)||(50926699-50926787)
chr1 (121-196)||(16298695-16298770)
chr1 (109-196)||(44954684-44954771)
chr1 (110-196)||(23526988-23527074)
chr1 (119-196)||(4080032-4080109)
chr1 (108-196)||(30786771-30786860)
chr1 (108-196)||(444009-444097)
chr1 (108-192)||(2868170-2868254)
chr1 (108-196)||(34555379-34555467)
chr1 (121-184)||(2867924-2867987)
chr1 (121-196)||(8230099-8230174)
chr1 (108-194)||(9833612-9833698)
chr1 (119-189)||(45048600-45048670)
chr1 (108-189)||(17088146-17088227)
chr1 (119-196)||(37421171-37421248)
chr1 (108-196)||(9992613-9992701)
chr1 (108-194)||(48173748-48173834)
chr1 (119-196)||(45048166-45048243)
chr1 (108-196)||(8229637-8229725)
chr1 (108-196)||(37505067-37505155)
chr1 (108-196)||(37505525-37505613)
chr1 (110-194)||(44582059-44582143)
chr1 (120-196)||(52335968-52336044)
chr1 (121-188)||(44291777-44291844)
chr1 (110-196)||(34555840-34555926)
chr1 (119-196)||(21938574-21938651)
chr1 (119-196)||(29439380-29439457)
chr1 (108-196)||(10279005-10279093)
chr1 (108-183)||(39485509-39485584)
chr1 (133-188)||(44954251-44954306)
chr1 (108-186)||(23340183-23340261)
chr1 (124-194)||(29020896-29020966)
chr1 (121-182)||(36229452-36229513)
chr1 (108-196)||(30787256-30787344)
[»] chr5 (33 HSPs)
chr5 (119-194)||(38900655-38900730)
chr5 (108-196)||(16752582-16752670)
chr5 (119-196)||(4966827-4966904)
chr5 (119-196)||(20266373-20266450)
chr5 (108-196)||(4967229-4967317)
chr5 (108-189)||(41834524-41834605)
chr5 (108-196)||(15029767-15029855)
chr5 (108-196)||(15115550-15115638)
chr5 (108-196)||(22651769-22651857)
chr5 (108-194)||(28289684-28289770)
chr5 (127-188)||(13557011-13557072)
chr5 (119-196)||(28595191-28595268)
chr5 (121-189)||(10721799-10721867)
chr5 (108-191)||(28495294-28495377)
chr5 (121-196)||(32305831-32305906)
chr5 (109-196)||(32697684-32697771)
chr5 (119-196)||(17260678-17260755)
chr5 (108-196)||(18150182-18150270)
chr5 (118-194)||(20260935-20261011)
chr5 (121-196)||(14340868-14340943)
chr5 (121-196)||(22651358-22651433)
chr5 (109-196)||(27307518-27307605)
chr5 (108-196)||(21371154-21371242)
chr5 (108-196)||(28290102-28290190)
chr5 (158-194)||(5162029-5162065)
chr5 (108-196)||(18149733-18149821)
chr5 (108-196)||(38901098-38901186)
chr5 (109-196)||(8419078-8419165)
chr5 (121-179)||(16753045-16753103)
chr5 (109-183)||(28494845-28494919)
chr5 (143-196)||(21769577-21769630)
chr5 (108-185)||(27307061-27307138)
chr5 (108-196)||(19291356-19291444)
[»] chr4 (49 HSPs)
chr4 (110-196)||(24851924-24852010)
chr4 (119-196)||(51309963-51310040)
chr4 (110-194)||(24336223-24336307)
chr4 (108-196)||(46737113-46737201)
chr4 (108-194)||(34807116-34807202)
chr4 (122-196)||(35193322-35193396)
chr4 (110-196)||(54440573-54440659)
chr4 (119-196)||(229617-229694)
chr4 (119-196)||(23986531-23986608)
chr4 (108-188)||(12593489-12593569)
chr4 (108-196)||(40160094-40160182)
chr4 (110-196)||(34789841-34789927)
chr4 (108-194)||(51309667-51309753)
chr4 (119-196)||(229172-229249)
chr4 (108-189)||(35193767-35193848)
chr4 (108-196)||(12593024-12593112)
chr4 (108-196)||(19528869-19528957)
chr4 (108-196)||(26974283-26974371)
chr4 (108-196)||(33689829-33689917)
chr4 (108-196)||(55677416-55677504)
chr4 (108-183)||(24335761-24335836)
chr4 (108-189)||(17503974-17504055)
chr4 (119-196)||(45838558-45838635)
chr4 (108-196)||(21034235-21034323)
chr4 (108-196)||(21034695-21034783)
chr4 (108-196)||(28465539-28465627)
chr4 (108-196)||(34789382-34789470)
chr4 (121-196)||(14439841-14439916)
chr4 (110-196)||(28465083-28465169)
chr4 (119-189)||(41608385-41608455)
chr4 (110-196)||(54441027-54441113)
chr4 (132-196)||(6617120-6617184)
chr4 (108-196)||(14440286-14440374)
chr4 (121-189)||(40160555-40160623)
chr4 (108-196)||(41608873-41608961)
chr4 (108-196)||(56077782-56077870)
chr4 (121-196)||(26974703-26974778)
chr4 (119-194)||(30597979-30598054)
chr4 (119-194)||(36168340-36168415)
chr4 (119-197)||(10795768-10795846)
chr4 (111-196)||(16214953-16215038)
chr4 (119-196)||(33777643-33777720)
chr4 (133-194)||(33778072-33778133)
chr4 (133-196)||(17504417-17504480)
chr4 (145-196)||(18965177-18965228)
chr4 (119-196)||(41114168-41114245)
chr4 (108-196)||(24851316-24851404)
chr4 (110-174)||(35644042-35644106)
chr4 (108-196)||(46736655-46736743)
[»] chr8 (30 HSPs)
chr8 (108-196)||(41260719-41260807)
chr8 (119-196)||(28876914-28876991)
chr8 (108-196)||(15255853-15255941)
chr8 (108-196)||(42036230-42036318)
chr8 (121-196)||(18050049-18050124)
chr8 (109-196)||(28254884-28254971)
chr8 (108-194)||(35427272-35427358)
chr8 (108-196)||(6115569-6115657)
chr8 (108-196)||(7911074-7911162)
chr8 (109-196)||(42035773-42035860)
chr8 (108-194)||(599532-599618)
chr8 (108-194)||(7910616-7910702)
chr8 (108-194)||(16578108-16578194)
chr8 (119-193)||(28877350-28877424)
chr8 (108-196)||(9796726-9796814)
chr8 (119-196)||(18428220-18428297)
chr8 (108-196)||(599956-600044)
chr8 (108-196)||(15256289-15256377)
chr8 (108-196)||(34799541-34799629)
chr8 (108-196)||(41260271-41260359)
chr8 (109-196)||(35693869-35693956)
chr8 (119-196)||(18049601-18049678)
chr8 (119-196)||(35694336-35694413)
chr8 (108-196)||(5730817-5730905)
chr8 (108-196)||(18674148-18674236)
chr8 (119-183)||(18805175-18805238)
chr8 (164-196)||(26252865-26252897)
chr8 (110-196)||(2208716-2208802)
chr8 (110-196)||(28254427-28254513)
chr8 (108-185)||(16578565-16578642)
[»] chr7 (46 HSPs)
chr7 (108-196)||(34595230-34595318)
chr7 (121-196)||(28687957-28688032)
chr7 (108-196)||(5333880-5333968)
chr7 (108-196)||(9181870-9181958)
chr7 (108-196)||(39136991-39137079)
chr7 (110-196)||(5334277-5334363)
chr7 (119-196)||(787244-787321)
chr7 (119-196)||(26026328-26026405)
chr7 (108-196)||(5746099-5746186)
chr7 (108-196)||(16081757-16081845)
chr7 (108-196)||(39136686-39136774)
chr7 (108-195)||(27245203-27245290)
chr7 (108-196)||(45815344-45815429)
chr7 (119-196)||(35161260-35161337)
chr7 (108-196)||(2758156-2758244)
chr7 (108-196)||(7732945-7733033)
chr7 (108-196)||(24929766-24929854)
chr7 (108-196)||(25637197-25637285)
chr7 (109-189)||(35579350-35579430)
chr7 (108-196)||(49064034-49064122)
chr7 (108-188)||(49064186-49064266)
chr7 (109-196)||(39388726-39388813)
chr7 (114-196)||(18535341-18535422)
chr7 (110-196)||(34594585-34594671)
chr7 (108-194)||(48247587-48247673)
chr7 (108-196)||(7732488-7732576)
chr7 (108-196)||(11971334-11971422)
chr7 (108-196)||(16917713-16917801)
chr7 (110-189)||(9393738-9393817)
chr7 (109-196)||(9394188-9394274)
chr7 (109-196)||(15712366-15712453)
chr7 (110-196)||(9181534-9181620)
chr7 (119-196)||(25637656-25637733)
chr7 (121-194)||(33880633-33880706)
chr7 (108-184)||(786782-786858)
chr7 (108-196)||(48248050-48248138)
chr7 (119-185)||(5745650-5745716)
chr7 (119-188)||(35578910-35578979)
chr7 (108-196)||(4477702-4477790)
chr7 (108-196)||(26048404-26048492)
chr7 (110-194)||(27245664-27245748)
chr7 (121-194)||(11973862-11973935)
chr7 (108-196)||(16081299-16081387)
chr7 (108-196)||(28687593-28687681)
chr7 (108-184)||(32427488-32427564)
chr7 (161-189)||(45815531-45815559)
[»] chr6 (20 HSPs)
chr6 (108-196)||(31073600-31073688)
chr6 (108-196)||(31574183-31574271)
chr6 (108-196)||(35163645-35163733)
chr6 (108-196)||(5120927-5121015)
chr6 (108-196)||(32836454-32836542)
chr6 (119-196)||(25468860-25468937)
chr6 (119-196)||(835405-835482)
chr6 (108-196)||(29891080-29891168)
chr6 (119-189)||(35163195-35163265)
chr6 (119-184)||(835695-835760)
chr6 (111-196)||(24640643-24640728)
chr6 (119-180)||(31242817-31242878)
chr6 (119-196)||(33095725-33095802)
chr6 (108-196)||(25472471-25472559)
chr6 (119-189)||(32836018-32836088)
chr6 (108-196)||(28636292-28636380)
chr6 (119-183)||(33096082-33096146)
chr6 (108-165)||(22534213-22534270)
chr6 (108-196)||(5114468-5114556)
chr6 (108-196)||(30251150-30251238)
[»] scaffold1432 (1 HSPs)
scaffold1432 (108-196)||(523-611)
[»] scaffold0108 (2 HSPs)
scaffold0108 (108-196)||(15113-15201)
scaffold0108 (108-196)||(15556-15644)
[»] scaffold0007 (4 HSPs)
scaffold0007 (108-196)||(210795-210883)
scaffold0007 (110-196)||(205825-205911)
scaffold0007 (119-196)||(204939-205016)
scaffold0007 (119-196)||(205369-205446)
[»] scaffold0097 (2 HSPs)
scaffold0097 (119-196)||(46277-46354)
scaffold0097 (108-188)||(46734-46814)
[»] scaffold0021 (2 HSPs)
scaffold0021 (121-188)||(159032-159099)
scaffold0021 (144-196)||(159339-159391)
[»] scaffold0712 (1 HSPs)
scaffold0712 (120-196)||(6854-6930)
[»] scaffold0709 (1 HSPs)
scaffold0709 (120-196)||(6872-6948)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 43223030 - 43222847
Alignment:
Q  17 attactcatatcacctacaaattaatattcaaccttacgttcataaccatgaatacaccaatacttgataaaagtaatttnnnnnnnnnnng---gctta 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               |||||    
T  43223030 attactcacatcacctacaaattaatattcaaccttacgttcataaccatgaatacaccaatacttgataaaagtaatttaaaaaaaaaaaaaaagctta 43222931  T
Q  114 atcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaactt 197  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43222930 atcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactt 43222847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 49407796 - 49407885
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaactt 197  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| |||||||| |||||||||||||    
T  49407796 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactt 49407885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 36701106 - 36701194
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  36701106 ggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaact 36701194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 36701640 - 36701554
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaact 36701554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 40839187 - 40839110
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||| ||||||||||| |||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  40839187 acttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaact 40839110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 44676472 - 44676560
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||||| |||| |||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  44676472 ggcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaact 44676560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 27199715 - 27199790
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||| |||||||    
T  27199715 ttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaact 27199790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 40275093 - 40275181
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| | |||||||||||| || | |||||||||||||||||||||| |||||||||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaact 40275181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 52237361 - 52237277
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||| | ||||||||||||| ||||||||| | |||||||||||| || | ||||||||||||||||||||||||||||||||    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaa 52237277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 52375877 - 52375789
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||||||||||||| | |||||||||||| || | |||||||||||| |||||||||||||| ||||||    
T  52375877 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaact 52375789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 46013422 - 46013508
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | ||||||| |||| |||||||||| | ||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  46013422 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaa 46013508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 52236818 - 52236904
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | |||||| |||||||||||||||  |  ||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  52236818 cttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaact 52236904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 40838663 - 40838740
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| ||||||||||||||| | |||||||||||| |||| ||||||||||||| ||||||||||||| ||||||    
T  40838663 acttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaact 40838740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 330382 - 330294
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | || |||||||||||||||||||| | |||||||||||| || | ||| ||||||||| ||||||||||||||||||||    
T  330382 ggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaact 330294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 33412700 - 33412612
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||||||||||||  |||||||||||||| |  || ||||||  |||||||||||||||||||||||||    
T  33412700 ggcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaact 33412612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 47431696 - 47431776
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||    
T  47431696 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtc 47431776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 50662958 - 50662870
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||||||||  ||||||||||| |||||||||||  ||||  || ||||||||||||||||||||||| ||||||    
T  50662958 ggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaact 50662870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 50901073 - 50900985
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||||||||||||| ||||||| ||||||  | ||||||||  ||||||||||||| ||||||||||||    
T  50901073 ggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaact 50900985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 51827957 - 51828045
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || |  |||||||||||||||||||||||||||||||||    
T  51827957 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaact 51828045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 52375327 - 52375415
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| |||||| || |  ||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  52375327 ggcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaact 52375415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 2044282 - 2044357
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||| ||||||||||||| | |||| ||||||| |||| ||||||||||||||||||||||||||| ||||    
T  2044282 acttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaa 2044357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 25534890 - 25534972
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccc 190  Q
    |||||||| | ||||||||||||||||||||||| |  ||| ||||||| || | ||||||||||||||||||||||||||||    
T  25534890 ggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtccc 25534972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 49720371 - 49720457
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | ||||||| |||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||    
T  49720371 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaa 49720457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 22370607 - 22370684
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| | |||||||||||| || | ||| ||||||| | ||||||||||||||||||||    
T  22370607 acttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaact 22370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 41998774 - 41998689
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaa 193  Q
    |||||||| | |||||||||||| |||||||||| | || |||||| || || | |||||||||||||||||||||||||||||||    
T  41998774 ggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaa 41998689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 37076207 - 37076139
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    ||||||||||||||||||||  |||||||||||||| ||  |||||||| |||||||||||||||||||    
T  37076207 ttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcc 37076139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 40275639 - 40275552
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| | ||||||||| || || | |||||||||||||||||||||||||| |||||||    
T  40275639 ggcttaattacacttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaact 40275552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 43222403 - 43222478
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| || ||||||||| | |||||||||||  | ||| |||||||||||||||||||||||||||||||||    
T  43222403 ttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaact 43222478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 16689371 - 16689444
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||| ||||    
T  16689371 ttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaa 16689444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 27200237 - 27200164
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaa 181  Q
    |||||||| | |||||||||||| |||||||||| |||||||||||||| |  ||||||||| |||||||||||    
T  27200237 ggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaa 27200164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 34105185 - 34105108
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| |||||||||| | || |||||  || || | ||||||||||||||||||||||||||||||||||    
T  34105185 acttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaact 34105108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 44677007 - 44676930
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | |||||||||||| ||||  || ||||||||||||||||||||||| ||||||    
T  44677007 acttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 44676930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 55389616 - 55389693
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||| ||||| ||| | |||||||||||| || | ||| ||||||||||||||||||||||| ||||||    
T  55389616 acttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaact 55389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 14654735 - 14654647
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| ||    | ||||||||||||||||||||||||||| ||||||    
T  14654735 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaact 14654647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 43678295 - 43678383
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||| ||| ||||  || ||||||||||||||||||||||| ||||||    
T  43678295 ggcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 43678383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 49720907 - 49720819
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||   |||||||| | |||||||||||| ||||  || ||||||||||||||||||||||| ||||||    
T  49720907 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 49720819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 49952092 - 49952012
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||| | | |||||||||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||    
T  49952092 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtc 49952012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 51828539 - 51828627
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| |  | |||||| || || | ||||||||||||||||||||||||||| ||||||    
T  51828539 ggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaact 51828627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 55192118 - 55192206
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||| |||| ||||||||||| |||||||||||||| ||  |||||||| ||||| ||||||| ||||| ||||||    
T  55192118 ggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaact 55192206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 55390143 - 55390055
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||||||||||| || |  ||||||||||| || | ||| ||||||||| |||||||||||| |||||||    
T  55390143 ggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaact 55390055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 8873703 - 8873770
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    ||||||||||||||||||||  || | ||||||||| ||||| |||||||||||||||||||| ||||    
T  8873703 ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgtc 8873770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 37075687 - 37075774
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | ||||||||||  ||||||||||| | |||||||||||| || ||||||||| ||||| ||||||  ||||||||||||    
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaact 37075774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 37847344 - 37847277
Alignment:
Q  129 ctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| ||||||| ||||||| || ||||||||| ||||||||||||  ||||||||||||    
T  37847344 ctcgcattttgataagctcaggaaaatggtcttgcctctttcaaatcgaacaaagccgtccctaaact 37847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 51472855 - 51472941
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| |||||||||||||| |||||||||| | |||| |||| |  || | ||||||||||||| |||||||| |||||||||    
T  51472855 ggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaa 51472941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 8874205 - 8874144
Alignment:
Q  135 ttttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| |||||||||||||| || ||| ||||||||||||||||||| | ||||||||||    
T  8874205 ttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaact 8874144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 32730400 - 32730477
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| |||||||||| | |||  |||| || || | |||||||||||| |||||||||||||||||||||    
T  32730400 acttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaact 32730477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 49951557 - 49951634
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  49951557 acttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 49951634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 2051295 - 2051383
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||| | ||||||    
T  2051295 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaact 2051383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 16701338 - 16701250
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | ||||||||||  ||||||||| | |||||||||||| ||||  || |||||| |||||||||||||||| ||||||    
T  16701338 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaact 16701250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 38535309 - 38535397
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||| ||||||| || |  || ||||||||||||||||||||||| ||||||    
T  38535309 ggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 38535397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 39010075 - 39010151
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaat 184  Q
    |||||||| | | |||||||||| |||||||||| | ||||| ||| || |||| ||||||||||||||||||||||    
T  39010075 ggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaat 39010151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 39010542 - 39010486
Alignment:
Q  133 cattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    ||||||||| ||||||||||||||||| |  || |||||||||||||||||||||||    
T  39010542 cattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtcc 39010486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 41998229 - 41998317
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | ||| |||||||| || |  || ||||||||||||||||||||||| ||||||    
T  41998229 ggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 41998317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 43678830 - 43678742
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||  | ||||||||  || ||   ||||||||||||||||||||||||||| ||||||    
T  43678830 ggcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaact 43678742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 30513735 - 30513802
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||||| |||||||||||| |||||||||||| || |  || |||||||||||| |||||||||    
T  30513735 ttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtc 30513802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 49408326 - 49408252
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    ||||||| | ||||||||| ||||||||||||| | |||||||||||| |  || |||||| |||||||||||||    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaa 49408252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 329857 - 329934
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||| ||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  329857 acttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaact 329934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 12140948 - 12141024
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| |||||| ||||| |  || ||||||||||| |||||||||||| |||||||| |||| ||||||||||||    
T  12140948 acttttgttcctcgtatttttatcagatcacgaaaatggtcatgcctctttcaaatcgaagaaaa-cgtccctaaact 12141024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 51473391 - 51473314
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| ||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  51473391 acttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 51473314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 38535841 - 38535753
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| |||||||||||||  |||||||||| | || |||||| |  ||    ||||||||||||||| |||||||||||||||||    
T  38535841 ggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaact 38535753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 51828504 - 51828416
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  || |||||| | |||||||||||| ||||   | |||||||||||||||||| |||| ||||||    
T  51828504 ggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaact 51828416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 2323392 - 2323454
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    |||| |||||||||||||||| || |||| ||||| ||  ||||||||| |||||||||||||    
T  2323392 tttttgtcctcgcattttgaccagttcacaaaaattatactgcctctttcaaatcgaacaaaa 2323454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 23228552 - 23228472
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||| | ||||||||||| ||  ||||| |   |||||||||||||||||||| |||||||| |||||||||| ||||    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcc-cttttaaaacgaacaaaattgtcc 23228472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 12141237 - 12141149
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| |||||||||||| |  || ||||| ||||| || | ||||||| ||||||||||||| | || |||||||    
T  12141237 ggcttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaaccatctctaaact 12141149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 14654199 - 14654279
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||| | ||||||| | ||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||    
T  14654199 ggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14654279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 20495204 - 20495281
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20495204 acttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaact 20495281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 28143564 - 28143487
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  28143564 acttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaact 28143487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 31797323 - 31797235
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  31797323 ggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaact 31797235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 42192789 - 42192701
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||||||||||||| | |||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  42192789 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaact 42192701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 11540184 - 11540096
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| |||||||||||| |||||||||||| | |||||||||||| || | ||||||||||||||||||||||||||| ||||||    
T  11540184 ggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaact 11540096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 42192240 - 42192328
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| | |||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaact 42192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 33920625 - 33920700
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  33920625 ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaact 33920700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 4355755 - 4355843
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| ||||||||||   ||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaact 4355843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 38007950 - 38008038
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||||    
T  38007950 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 38008038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 44220191 - 44220103
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||| |||||||||||||||| | |||||||||||| |||| ||| ||||||||| ||||||||||||||||||||    
T  44220191 ggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaact 44220103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 2190611 - 2190536
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||||| |||||||||||| ||||||||||| || || ||||| ||| ||||||||||||||||||||||||    
T  2190611 acttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaa 2190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 43160022 - 43160097
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |||||||||  | ||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  43160022 ttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaact 43160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 14942392 - 14942306
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||||| || || |||||| |||||||||||||| |||| ||||    
T  14942392 ggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaa 14942306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 25336146 - 25336060
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || | | ||||||||||||||||||||||||||||||    
T  25336146 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaa 25336060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 9330330 - 9330253
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| |||||||||| | ||||||||| |  |||| |||||||||||||||||||||||||||| |||||    
T  9330330 acttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaact 9330253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 649527 - 649615
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||| ||||| | || |||||| || || | ||||||||||||||||||||||||||||||||||    
T  649527 ggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 649615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 6949990 - 6949902
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || | | |||||||||| |||||||||||||||||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaact 6949902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 32418692 - 32418604
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||||||||  ||||||||| |  |||||||| ||||  | ||||||||||||||||||||||||||| ||||||    
T  32418692 ggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaact 32418604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 43216255 - 43216167
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||| ||||| || ||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||||    
T  43216255 ggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 43216167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 63507 - 63422
Alignment:
Q  111 ttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||| ||| |||||||||| | |||||||| | |||||||||||| || |  |||||||||||| ||||||||||||||||||||    
T  63507 ttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 63422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 15550684 - 15550761
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| |||| ||||| |||| | ||||||||| || || | ||||||||||||||||||||||||||||||||||    
T  15550684 acttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 15550761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 16175885 - 16175808
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  |||||| || | ||||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  16175885 acttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaact 16175808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 4356302 - 4356214
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | ||||||| |||| ||||  || ||||||||||||||||||||||| ||||||    
T  4356302 ggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 4356214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 4808903 - 4808967
Alignment:
Q  132 gcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| | ||||||||| ||||| | ||||||||||||||||||||||||||| ||||||    
T  4808903 gcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaact 4808967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 5560051 - 5560139
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| ||||  || |||||||| |||||||||||||| ||||||    
T  5560051 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaact 5560139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 16952935 - 16953023
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||||||||  ||||||||| | |||||||||||  || |  || ||||||||||||||||||||||| ||||||    
T  16952935 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaact 16953023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 17060906 - 17060994
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||||||||  ||||||||| | |||||||||||  || |  || ||||||||||||||||||||||| ||||||    
T  17060906 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaact 17060994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 20128283 - 20128195
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| ||||||| || | ||||||||| || || | ||||||||||||| ||||||||||||| ||||||    
T  20128283 ggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaact 20128195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 24140220 - 24140132
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||||||| ||||| | |||||||||||| || | ||| ||||||||| ||||||||||||| ||||||    
T  24140220 ggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaact 24140132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 38008497 - 38008409
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  38008497 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 38008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 5037202 - 5037156
Alignment:
Q  150 gaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  5037202 gaaaatggtcatgcctcttttaaattgaacaaaatcgtccctaaact 5037156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 16953479 - 16953394
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||| | |||||||||||| |||||||||| | |||| |||| || || | |||||||||||||||||||||  |||||||||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaa 16953394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 32418159 - 32418245
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||| ||||||| |||||||||| | ||||||||| || || | |||||||  |||||||||||||||||||||||||    
T  32418159 ggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaact 32418245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 33921158 - 33921065
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaacttaatg 201  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||  |||||| ||||    
T  33921158 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatg 33921065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 62957 - 63045
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||| |||||||  ||||||||| | |||||||||||| || | ||| ||| ||||||||||||||||||| ||||||    
T  62957 ggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaact 63045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 3824251 - 3824179
Alignment:
Q  111 ttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    ||||| |||||||||||| ||||||||| || | ||||||||| || |||||||  |||||||||||||||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 11539637 - 11539725
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |   | ||||||||||||||||||||||| ||||||    
T  11539637 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaact 11539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 20127736 - 20127824
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| |  ||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  20127736 ggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 20127824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 43160557 - 43160469
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||| ||||||  ||||||||||| |||||||||||| || |  || ||||||||||||| ||||||||| ||||||    
T  43160557 ggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaact 43160469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 13399460 - 13399510
Alignment:
Q  146 tcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| || |||| |||||||||||| |||||||||||||||||||||    
T  13399460 tcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaact 13399510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 44219644 - 44219730
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | ||||||||||||  ||||||||  | ||||| ||||||||| | ||| |||||||||||||||||| |||| ||||    
T  44219644 ggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaa 44219730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 6949451 - 6949532
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||| | | ||||||||||  ||||||||| | |||||||||||| || |  || |||||||||||||||||||||||    
T  6949451 ggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcc 6949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 13315504 - 13315581
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| |||||  ||||||||| | |||| ||||||| ||||  || ||||||||||||||||||||||| ||||||    
T  13315504 actttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 13315581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 9747532 - 9747596
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    ||||||| |||||||||||||||| |||||||||| || |  ||||| ||||||||| |||||||    
T  9747532 acttttgatcctcgcattttgacatgctcacgaaattggttctgccttttttaaatccaacaaaa 9747596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 649881 - 649802
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||| | ||||||||||||  ||||||||| | |||||||||||| || |   | |||||||||||||||||||||||    
T  649881 cttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcc 649802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 4809425 - 4809337
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |   | |||||||| ||||||| |||||| ||||||    
T  4809425 ggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaact 4809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 5035903 - 5035951
Alignment:
Q  148 acgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||| || || || ||||||||||||||||| ||||||||||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaact 5035951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 5561074 - 5561018
Alignment:
Q  120 cttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcg 176  Q
    ||||||||||| ||||||| || | ||||||||| ||||| | ||||||||||||||    
T  5561074 cttttggtccttgcattttaactaactcacgaaattgatcctacctcttttaaatcg 5561018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 17641904 - 17641827
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  17641904 acttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaact 17641827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 29021400 - 29021325
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  29021400 acttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaa 29021325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 50304441 - 50304527
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||| |||||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaact 50304527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 25274767 - 25274844
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||    
T  25274767 acttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaact 25274844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 39485076 - 39485153
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||| ||||||||||||||||||||||||||    
T  39485076 acttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaact 39485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 50926243 - 50926318
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||| ||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  50926243 ttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaact 50926318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 10278550 - 10278636
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | |||||||||||| |||||||||| | ||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaact 10278636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 23526669 - 23526742
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcccta 192  Q
    ||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  23526669 acttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatcccta 23526742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 29438930 - 29439023
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaacttaatg 201  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || | |||||||||||||||||||||||||||||||||| ||||    
T  29438930 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatg 29439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 17088685 - 17088597
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||  |||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||    
T  17088685 ggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaact 17088597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 44802717 - 44802629
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| ||||||||||| || |||||||||||| |||  |||||||||||||||||||||    
T  44802717 ggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaact 44802629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 44291312 - 44291389
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||| ||||||||| |||||||||||||| | |||||||||| |||| |||||||||||||| ||||||    
T  44291312 acttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaact 44291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 1837505 - 1837593
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||  | ||||||||| |||||||  ||||||||||||||||||||| |||||||||||    
T  1837505 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaact 1837593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 50926787 - 50926699
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||||| ||  | |||||| ||||||||||||| ||||||||||||    
T  50926787 ggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaact 50926699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 16298695 - 16298770
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| ||| |||||||||| | ||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  16298695 ttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaact 16298770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 44954771 - 44954684
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | ||||||||||||||||||||||| | |||| |||||||||||| ||| ||||||||| ||||||||| ||| ||||||    
T  44954771 gcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaact 44954684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 23527074 - 23526988
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| ||||||||| ||||| ||||||||  |||||| ||||||| |||||||| ||||||||||||||||| |||| |||||||    
T  23527074 cttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaact 23526988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 4080032 - 4080109
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| |||| ||||| | ||||||||| ||||| | ||| ||||||||||||||||||||||||||||||    
T  4080032 acttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaact 4080109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 30786771 - 30786860
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaat-gatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||| || |||||||||| | ||||||||||| | || | ||||||||||||||||||||||||||||||||||    
T  30786771 ggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 30786860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 444097 - 444009
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||| || | |||||||||| | ||||||||| |  |||| ||||||||||||||||||||||||| ||||||||    
T  444097 ggcttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaact 444009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 2868254 - 2868170
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcccta 192  Q
    |||||||| | ||||||| ||||| ||||||||| | | |||||||||| || | ||||||||||||||||||||||||||||||    
T  2868254 ggcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccta 2868170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 34555379 - 34555467
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||| ||||| || |  | ||||||||||||||||||||||||||||||||||    
T  34555379 ggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaact 34555467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 2867924 - 2867987
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaat 184  Q
    |||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||||||    
T  2867924 ttttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaat 2867987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 8230174 - 8230099
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| |||||||||||||    ||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  8230174 ttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaact 8230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 9833698 - 9833612
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||  |||||||| |||| | | |||||| | |||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  9833698 ggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaa 9833612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 45048670 - 45048600
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    ||||||||||||||||||||||| || ||||||||||| |||| |||||||  |||||||||||| |||||    
T  45048670 acttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcc 45048600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 17088146 - 17088227
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||| | ||| |||||| |||||||||||| |||||||||||||| |  ||||||||| ||||||||||||| |||||    
T  17088146 ggcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtcc 17088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 37421171 - 37421248
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| | |||||||||| |  |||||||| || || | ||||||||||||||||||||||||||||||||||    
T  37421171 acttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaact 37421248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 9992701 - 9992613
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||||| |||| ||||||| || |  || ||||||||||||||||||||| | ||||||    
T  9992701 ggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaact 9992613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 48173748 - 48173834
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||  ||| |||||||| ||||||||||| || |||| |||||| |  ||||||||| |||||||||||||||| |||||||    
T  48173748 ggcttaattgtacctttggtccacgcattttgaccagttcacaaaaatggttctgcctctttcaaatcgaacaaaatcgaccctaaa 48173834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 45048166 - 45048243
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| |||||||||| | || ||||||||| |  | |||||||||||| |||||||||||||| ||||||    
T  45048166 acttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaact 45048243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 8229637 - 8229725
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||| ||||||||  | ||||||||||||||  | | |||||||||||||| ||||||||| |||||||    
T  8229637 ggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaact 8229725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 37505067 - 37505155
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| |  |  || ||||||||||||||||||||||| ||||||    
T  37505067 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaact 37505155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 37505613 - 37505525
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||| ||||||||||   |||||||| | ||||||||| |||||||  |||||||||| | ||||||||||||| ||||||    
T  37505613 ggcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaact 37505525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 44582059 - 44582143
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||| | ||||||||||||  ||||||||| | || |||||| || || | |||||||||||||||||||||||||| |||||    
T  44582059 cttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaa 44582143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 52336044 - 52335968
Alignment:
Q  120 cttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||  ||||||||| | |||| |||| || || | ||||||||||||||||||||||||||||||||||    
T  52336044 cttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 52335968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 44291844 - 44291777
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||| ||||| | |||||||| |||||| ||||||| ||||| ||||||||||||||| |||||||||    
T  44291844 ttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtc 44291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 34555926 - 34555840
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | |||||| |||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 34555840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 21938574 - 21938651
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |  ||||||||  | ||||||||||||||| |  || ||||||||||||||||||||||| ||||||    
T  21938574 acttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaact 21938651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 29439457 - 29439380
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||   ||||||||  | ||||||||||||||| |  || ||||||||||||||||||||||| ||||||    
T  29439457 acttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaact 29439380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 10279093 - 10279005
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||  | ||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  10279093 ggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 10279005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 39485584 - 39485509
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    |||||||| ||||||||| |||||||||||| |  |||||| ||||||| |  ||||||||| ||||| |||||||    
T  39485584 ggcttaattatacttttgatcctcgcattttaatcagctcatgaaaatggttctgcctctttcaaatcaaacaaaa 39485509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 44954251 - 44954306
Alignment:
Q  133 cattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    ||||||||| | |||||||||||| |||| ||| ||||||||| ||||||||||||    
T  44954251 cattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtc 44954306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 23340183 - 23340261
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcg 186  Q
    |||||||| | ||||||| || | |||||||||| | ||||||||| || || |  |||||||||||||||||||||||    
T  23340183 ggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcg 23340261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 29020896 - 29020966
Alignment:
Q  124 tggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||| ||| |||||||  ||||||  |||||| ||||| |||||||||||||||||||||| ||| ||||    
T  29020896 tggtcttcgtattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaa 29020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 36229513 - 36229452
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaa 182  Q
    ||||||||||||||||||  |||||| ||||||||| || || |||| |||||| |||||||    
T  36229513 ttttggtcctcgcattttaccaagcttacgaaaatggtcttgtctctattaaattgaacaaa 36229452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 30787344 - 30787256
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||  ||||| ||  | |||||||||||| ||||  || ||| ||||||||||||||||||| ||||||    
T  30787344 ggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaact 30787256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 38900655 - 38900730
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  38900655 acttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaa 38900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 16752582 - 16752670
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||  |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  16752582 ggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaact 16752670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 4966827 - 4966904
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| | |||||||||||  |  ||||||||||||||||||||||||||||||||||||    
T  4966827 acttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaact 4966904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 20266450 - 20266373
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||||| |||||||| |||| ||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  20266450 acttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaact 20266373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 4967317 - 4967229
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| | ||||| |||||| || | ||||||||||||||||||||||||||||||||||    
T  4967317 ggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaact 4967229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 41834605 - 41834524
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||||| | ||||||||||| |||||    
T  41834605 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc 41834524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 15029855 - 15029767
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| | |||||||||||| || | ||| ||||||||||||||||||||||| ||||||    
T  15029855 ggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaact 15029767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 15115638 - 15115550
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||| ||||||||| | |||||||||||| || | ||||||||||||||||||||||||||| ||||||    
T  15115638 ggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaact 15115550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 22651857 - 22651769
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||| |||||||||||||||| |||||||||||||| |  ||||| ||| ||||||||||||||||||| ||||||    
T  22651857 ggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaact 22651769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 28289684 - 28289770
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | ||||||| |||| |||||||||| | ||||||||| |  |||| ||||||||||||||||||||||||||||||||    
T  28289684 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaa 28289770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 13557011 - 13557072
Alignment:
Q  127 tcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  13557011 tcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgtc 13557072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 28595191 - 28595268
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||||| |||||||| |||| || |||||| |||||| ||||| ||| ||||||||||||||||||||||    
T  28595191 acttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaact 28595268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 10721799 - 10721867
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    ||||||||||| ||||||||| |||||||||||||| || || |||||| |||||||||||||||||||    
T  10721799 ttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc 10721867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 28495377 - 28495294
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccct 191  Q
    |||||||| | ||||||||||  |  |||||||| |||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  28495377 ggcttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtccct 28495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 32305831 - 32305906
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| |||||||||||  |||||||||||||  |  | ||||||||||||||||||||||||||||||||||    
T  32305831 ttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaact 32305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 32697771 - 32697684
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | |||||||||| | |||||||||| | ||||||||| || || | |||||||||||||||||| |||||||||||||||    
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaact 32697684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 17260755 - 17260678
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| |  |||||||||||||  | ||||||| ||||||||||||| | ||||||||||    
T  17260755 acttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaact 17260678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 18150270 - 18150182
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||| || |||| | |||||||||| ||||||||| || || | ||||||||||||||||||||||| ||||||||||    
T  18150270 ggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaact 18150182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 20260935 - 20261011
Alignment:
Q  118 tacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||||||||| ||||||||| |||||| ||||||| ||  |||||||| ||||| |||||||||| |||||||    
T  20260935 tacttttggtcctcacattttgactagctcatgaaaatggtcccgcctctttcaaatcaaacaaaatcgaccctaaa 20261011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 14340943 - 14340868
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| || |||||||||| | ||||||||| || |||| | ||||||||||||||||||||||||| ||||||    
T  14340943 ttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaact 14340868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 22651358 - 22651433
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| |||| |||||||| |||||||| ||||| |||||||||||||||||| ||||||| | ||| ||||||    
T  22651358 ttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaact 22651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 27307605 - 27307518
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | ||||||||||| ||||||||||| || ||||||||||| |  | ||||||| ||||||||||||| ||||| ||||||    
T  27307605 gcttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaact 27307518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 21371242 - 21371154
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| |||| |||||||||| | ||||  ||| || || | ||||||||||||| ||||||||||||||||||||    
T  21371242 ggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaact 21371154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 28290190 - 28290102
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  |  ||||||||||||||||||||||| ||||||    
T  28290190 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaact 28290102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 5162065 - 5162029
Alignment:
Q  158 tcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||| ||||||||||||||||||||||||||||||||    
T  5162065 tcatacctcttttaaatcgaacaaaatcgtccctaaa 5162029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 18149733 - 18149821
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||  ||||| ||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  18149733 ggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 18149821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 38901186 - 38901098
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| |   |||||||||| || | ||  ||||||||||||||||||||||| ||||||    
T  38901186 ggcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaact 38901098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 8419165 - 8419078
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | ||||||||||||  ||||||||| | |||||||| ||| || |  || |||||||| |||||||||||||| ||||||    
T  8419165 gcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaact 8419078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 16753103 - 16753045
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaac 179  Q
    |||||||| |||||||||||| | |||||||||||| |  ||||||||| |||||||||    
T  16753103 ttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaac 16753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 28494845 - 28494919
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    ||||||| | ||||||||||||  ||||||||| || ||| ||||||| |  ||||||||| |||||||||||||    
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaa 28494919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 21769577 - 21769630
Alignment:
Q  143 agctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| |||||||   |||||||||| ||||||||||||| ||||||||||||    
T  21769577 agctcatgaaaatgggtatgcctctttcaaatcgaacaaaaccgtccctaaact 21769630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 27307061 - 27307138
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatc 185  Q
    |||||||| | ||||||||| ||||||||||||| | || | ||||||| |||||  ||||| |||| ||||||||||    
T  27307061 ggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatc 27307138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 19291356 - 19291444
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||   |||||||  | ||||| |||||| || |  || ||||||||||||||||||||||| ||||||    
T  19291356 ggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 19291444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 24852010 - 24851924
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| |||||||||||||| |||||||||| | ||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaact 24851924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 51310040 - 51309963
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||| |||||||||||||  |||||||||||    
T  51310040 acttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaact 51309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 24336307 - 24336223
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| ||| ||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaa 24336223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 46737201 - 46737113
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||||    
T  46737201 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 46737113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 34807116 - 34807202
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | |||||||||||| |||||||||  | ||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  34807116 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaa 34807202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 35193322 - 35193396
Alignment:
Q  122 tttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||||||||||  |||||||||||||| || | ||||||| ||||||||||||||||||||||||||    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaact 35193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 54440573 - 54440659
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | |||||||||||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 54440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 229694 - 229617
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |||||||||||| |||||||||||||| || ||||||||| ||||| ||||||||||||| ||||||    
T  229694 acttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaact 229617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 23986531 - 23986608
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| |||||| |||||||||||||  |||||||||||    
T  23986531 acttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaact 23986608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 12593569 - 12593489
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || |||| ||||||||||||||||||||||||||    
T  12593569 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtc 12593489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 40160094 - 40160182
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | ||||| ||| |||||||| || |||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  40160094 ggcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaact 40160182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 34789927 - 34789841
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | |||||||||||| |||||||||| | ||||||||| || || | |||||||||||||||||||||| |||||||||||    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaact 34789841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 51309667 - 51309753
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||  ||||||||||||||| ||||| |  ||||||||||||||||||||| ||||| |||||||||||||  |||||||||    
T  51309667 ggcttaattgtacttttggtcctcgtatttttattagctcacgaaaatgatcatgcgtctttcaaatcgaacaaaactgtccctaaa 51309753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 229172 - 229249
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||||| |||||||| ||||| |||||||| || ||||||||| |||| |||||||||||||| ||||||    
T  229172 acttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaact 229249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 35193848 - 35193767
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||||| || ||||||||| ||||| ||||||| |||||    
T  35193848 ggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcc 35193767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 12593024 - 12593112
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  || |||||| | |||||||||||| |||| ||| ||||||||||||||||||||||| ||||||    
T  12593024 ggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaact 12593112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 19528869 - 19528957
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| |  |||||||| || || | |||||||||||||||| |||||||||||||||||    
T  19528869 ggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaact 19528957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 26974283 - 26974371
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  |||||| |||| |||||||||||| ||||  || ||||||||||||||||||||||| ||||||    
T  26974283 ggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 26974371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 33689829 - 33689917
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||| ||| || || | ||||||||||||||||||||||||||| ||||||    
T  33689829 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaact 33689917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 55677504 - 55677416
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| | |||||||| | ||||||||| || || | |||||||||||||||||||||||||| |||||||    
T  55677504 ggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaact 55677416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 24335761 - 24335836
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    |||||||| | ||||| | |||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||    
T  24335761 ggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 24335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 17503974 - 17504055
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||| ||||| ||||||||||||||||||| | |||||||||||| || ||||||||| |||| ||||| || |||||    
T  17503974 ggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcc 17504055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 45838558 - 45838635
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| | |||||||| | |||||| || || || | ||||||||||||||||||||||||||||||||||    
T  45838558 acttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 45838635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 21034235 - 21034323
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  21034235 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 21034323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 21034783 - 21034695
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | |||||||||| |||||||||| | ||||||||| || || |  |||||||||||||||||||||||||||| ||||    
T  21034783 ggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaact 21034695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 28465627 - 28465539
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  28465627 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 28465539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 34789382 - 34789470
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  34789382 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 34789470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 14439841 - 14439916
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |||||||||| | ||||||||| || |||| ||| ||||||||  ||||||||||||||||||||    
T  14439841 ttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaact 14439916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 28465083 - 28465169
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | |||||| |||||  ||||||||| | || |||||| ||||| | ||||||||||||||||||||||||||| ||||||    
T  28465083 cttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaact 28465169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 41608385 - 41608455
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||||||| |||||||||  | |||| |||| || |||| |||||||||||||||||||||||||||    
T  41608385 acttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc 41608455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 54441113 - 54441027
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||||||||  ||||||||  |||||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  54441113 cttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 54441027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 6617184 - 6617120
Alignment:
Q  132 gcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| | ||||||||| || || | |||||||||||||||| |||||||||||||||||    
T  6617184 gcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaact 6617120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 14440374 - 14440286
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||||||||  ||||||||| | || ||||||||| || |  || ||||||||||||||||||| ||| ||||||    
T  14440374 ggcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaact 14440286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 40160623 - 40160555
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||||| |||||||||| | |||||||||||  |||||||||||| |||| |||||||| |||||    
T  40160623 ttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcc 40160555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 41608961 - 41608873
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | ||||||||| || || | ||||||||||||| ||||||||||| | ||||||    
T  41608961 ggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaact 41608873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 56077870 - 56077782
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | ||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  56077870 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaact 56077782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 26974778 - 26974703
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |||||||||  |  |||||||| || || | |||||||||||||||||||||| |||||||||||    
T  26974778 ttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaact 26974703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 30598054 - 30597979
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||||||||  ||||||| | |||||| || || |  || |||||||||||||||||||||||||||||||    
T  30598054 acttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaa 30597979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 36168340 - 36168415
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||| |||| |||||||||| | | ||||||| || || | ||||||||||||||||||||||||||| ||||    
T  36168340 acttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaa 36168415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 10795846 - 10795768
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaactt 197  Q
    ||||||| ||| ||||||||||  ||||||||||| || || |  |||||| |||||||||||||||||| ||||||||    
T  10795846 acttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtctctaaactt 10795768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 16215038 - 16214953
Alignment:
Q  111 ttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||| ||||||||||||||  ||||||||  | || ||||||||||||||  || |||||||| ||| |||||||||| ||||||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaact 16214953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 33777643 - 33777720
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| ||||  ||||||||| | |||||||||||||||||   | ||| ||||||||||||||||||| ||||||    
T  33777643 acttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaact 33777720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 33778133 - 33778072
Alignment:
Q  133 cattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    ||||||||| | ||||||||||||||  | ||||||||||||| ||||||||||| ||||||    
T  33778133 cattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaa 33778072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 17504480 - 17504417
Alignment:
Q  133 cattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||  |||||||||||||| || |  |||||||||||||||||||| ||||| ||||||    
T  17504480 cattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaact 17504417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 18965177 - 18965228
Alignment:
Q  145 ctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| | || ||||||||| ||||||||||||||||||| ||||||    
T  18965177 ctcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaact 18965228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 41114168 - 41114245
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | |||||||||| | || |  || ||||||||||||||||| ||||| ||||||    
T  41114168 acttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaact 41114245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 24851316 - 24851404
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||  ||||||||| | |||||||||||| |  |  || |||||||| |||||||||||||| ||||||    
T  24851316 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaact 24851404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 35644106 - 35644042
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaat 174  Q
    |||||| | |||||||||||| |||||||||| | |||||||||  | |||| ||||||||||||    
T  35644106 cttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 46736655 - 46736743
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||||| ||   |||||||| | |||||||||||| || |   | |||||||||||||||||| |||| ||||||    
T  46736655 ggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaact 46736743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 41260807 - 41260719
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| |||||||||||| | |||||||||  | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  41260807 ggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaact 41260719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 28876914 - 28876991
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||  ||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||    
T  28876914 acttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaact 28876991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 15255853 - 15255941
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||||    
T  15255853 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 15255941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 42036318 - 42036230
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||  || |||||||||||| | || |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  42036318 ggcttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaact 42036230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 18050124 - 18050049
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |||||||||| | ||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  18050124 ttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaact 18050049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 28254971 - 28254884
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | |||||||||||| |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 28254884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 35427358 - 35427272
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | ||||||||||||||||||||||| | |||||||||||| |  | ||||||||||| ||||||||||||||||||||    
T  35427358 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaa 35427272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 6115657 - 6115569
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| |||||||||||||| | |||||||| | ||| ||||| || || | ||||||||||||||||||||||||||||||||||    
T  6115657 ggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 6115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 7911162 - 7911074
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||  ||||||||||||||| | |||||||||||| |  | ||||||||||||||||||||||||||||||||||    
T  7911162 ggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaact 7911074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 42035773 - 42035860
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | ||||||||||||| ||||||||| | |||||||||||| |  | ||||||||||||||||||||||||||| ||||||    
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaact 42035860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 599532 - 599618
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | | |||||||||| |||||||||| | ||||||||| || |||| ||||||||||||||||||||||| ||||||||    
T  599532 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaa 599618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 7910616 - 7910702
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | | ||||||||||| ||||||||  | |||||||||||| | || ||||||||||||||||||||||||||||||||    
T  7910616 ggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaa 7910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 16578108 - 16578194
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | | ||||||| || |||||||||| | ||||||||| || || | ||||||||||||||||||||||||||||||||    
T  16578108 ggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaa 16578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 28877424 - 28877350
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaa 193  Q
    ||||||||||||||||||||||| | |||||||||||| | || ||||||| |||| ||||||||| ||||||||    
T  28877424 acttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccctaa 28877350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 9796726 - 9796814
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||| ||| || || | ||||||||||||||||||||||| ||| ||||||    
T  9796726 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaact 9796814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 18428297 - 18428220
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  18428297 acttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 18428220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 600044 - 599956
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | || ||||||||| ||||  || |||||||| |||||||||||||| ||||||    
T  600044 ggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaact 599956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 15256377 - 15256289
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||| ||||||| || |  || ||||||||||||||||||||||| ||||||    
T  15256377 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 15256289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 34799629 - 34799541
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| |  | |||||| || || | |||||||||||||||||||||| |||||||||||    
T  34799629 ggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaact 34799541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 41260271 - 41260359
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||| ||||||| || |  || ||||||||||||||||||||||| ||||||    
T  41260271 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 41260359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 35693869 - 35693956
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | ||||||| |||| |||||||||| |  | |||||||||||  | |||||||||||||||| |||||||||| ||||||    
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaact 35693956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 18049601 - 18049678
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | |||||||||||| |  |  || ||||||||||||||||||||||| ||||||    
T  18049601 acttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaact 18049678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 35694413 - 35694336
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | ||||| |||||| || | | | ||||||||||||||||||||||| ||||||    
T  35694413 acttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaact 35694336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 5730817 - 5730905
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||  || |  || ||||||||| ||||||||||||| ||||||    
T  5730817 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaact 5730905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 18674148 - 18674236
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||| |||||||| ||| |||||| |  |||||||| || |  | || |||||||||||||||||||||||||||||||    
T  18674148 ggcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaact 18674236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 18805175 - 18805238
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    |||||||||||  ||||||||||||||||||||||||| |  |  ||||||||||||||||||||    
T  18805175 acttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaa 18805238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 26252865 - 26252897
Alignment:
Q  164 ctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||||||||||||||||||||||||    
T  26252865 ctcttttaaatcgaacaaaatcgtccctaaact 26252897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 2208716 - 2208802
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||| ||||  ||||||||| | |||||||||||  || |  || ||||||||||||||||||||||| ||||||    
T  2208716 cttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaact 2208802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 28254427 - 28254513
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||||||||  ||||||||  | |||||||||||| || |  || |||||||| |||||||||||||| ||||||    
T  28254427 cttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaact 28254513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 16578642 - 16578565
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatc 185  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| | ||  || ||| |||||||||||||||    
T  16578642 ggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatc 16578565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 34595318 - 34595230
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| | |||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  34595318 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaact 34595230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 28688032 - 28687957
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||| |||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  28688032 ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaact 28687957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 5333880 - 5333968
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| |||| |||||||||| | |||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  5333880 ggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaact 5333968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 9181958 - 9181870
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| |||| |||||||||| |  |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  9181958 ggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaact 9181870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 39137079 - 39136991
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| |||||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  39137079 ggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 5334363 - 5334277
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||||||||| ||||||||| | |||||||||||  || | ||||||||||||||||||||||||||||||||||    
T  5334363 cttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaact 5334277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 787321 - 787244
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||| |||| |||||||| | |||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  787321 acttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaact 787244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 26026328 - 26026405
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| | |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  26026328 acttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaact 26026405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 5746186 - 5746099
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||    
T  5746186 ggcttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaact 5746099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 16081845 - 16081757
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | || ||||||||| |||||||||| | ||||||||| ||||| | ||||||||||||||||||||||| ||||||||||    
T  16081845 ggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaact 16081757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 39136686 - 39136774
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| |||| |||||||||| |||||||||||||| |  || |||||| ||||||||||||||||||||||||||    
T  39136686 ggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaact 39136774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 27245203 - 27245290
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaac 195  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| || || | |||||||||||||||||||||||||||| ||||    
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaac 27245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 45815344 - 45815429
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| ||||   ||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  45815344 ggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaact 45815429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 35161337 - 35161260
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| |||||||||| | |||||| || || || | ||||||||||||||||||||||||||||||||||    
T  35161337 acttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 35161260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 2758244 - 2758156
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||||||||||||   | |||||||||||| |  | ||||||||||||||||||||||||||| ||||||    
T  2758244 ggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaact 2758156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 7733033 - 7732945
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | ||||||||||||||| |  || ||||||||||||||||||||||| ||||||    
T  7733033 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaact 7732945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 24929854 - 24929766
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | |||||||||| |||||||||| | ||||||||| || || | ||||||||||||| ||||||||||||||||||||    
T  24929854 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaact 24929766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 25637197 - 25637285
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||| ||||| | |||| |||| || || | ||||||||||||||||||||||||||||||||||    
T  25637197 ggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 25637285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 35579430 - 35579350
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    ||||||| | ||||||| ||||||||||||||  |||||||||||||||| |||||||||| ||||| ||||||| |||||    
T  35579430 gcttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtcc 35579350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 49064034 - 49064122
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||| |  ||||||||| |||| |||||||||| ||| ||||||    
T  49064034 ggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaact 49064122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 49064266 - 49064186
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||| ||||||||| ||||| ||||||| | || ||||||||||| ||||| |||||| ||||||||||||||||||    
T  49064266 ggcttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtc 49064186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 39388813 - 39388726
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | |||||||||||| |||||||||| | ||||||||| |  || | |||||||||||||||||||||||||| |||||||    
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaact 39388726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 18535422 - 18535341
Alignment:
Q  114 atcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||| |||||||||||||| ||||||||| ||||| ||||||| || | ||||||| ||||||||||||| ||||||||||||    
T  18535422 atcacacttttggtcctcgtattttgacatgctcaagaaaatggtc-tacctctttcaaatcgaacaaaaccgtccctaaact 18535341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 34594585 - 34594671
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||||||||||||||||||| | ||||||||||| |||  || |||||| |||| ||||||||| ||||||||||    
T  34594585 cttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaact 34594671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 48247587 - 48247673
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||| | |||||||||||| |||||||||  | ||||||||| || || | ||||||||||||| ||||||||||||||||||    
T  48247587 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaa 48247673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 7732488 - 7732576
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | |||||||||| |||||||||  | ||||||||| || || | ||||||||||||||||||||||||||| ||||||    
T  7732488 ggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaact 7732576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 11971334 - 11971422
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| ||||||||||||||  |||||||||   |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  11971334 ggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 11971422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 16917713 - 16917801
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| ||||  || ||||||||||||||||||| ||| ||||||    
T  16917713 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaact 16917801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 9393738 - 9393817
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||| | ||||||| ||||||||||||||  |||||||||||||  || ||||||||| ||||||||||||| |||||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc 9393817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 9394274 - 9394188
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | |||||||||| |||||||||||| ||||||| |||||| || | ||| ||| ||||||||||||| ||||||||||||    
T  9394274 gcttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaact 9394188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 15712366 - 15712453
Alignment:
Q  109 gcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 15712453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 9181534 - 9181620
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 9181620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 25637733 - 25637656
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  25637733 acttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 25637656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 33880633 - 33880706
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||||||| |||||||| ||||||| |||||  |  ||||||||| ||||||||||||| ||||||||||    
T  33880633 ttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaa 33880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 786782 - 786858
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaat 184  Q
    |||||||| | ||||||| ||||  ||||||||| | |||||||||||| |||| ||| ||||||||||||||||||    
T  786782 ggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaat 786858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 48248138 - 48248050
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||  ||||||||| | ||||| |||||| || |  || ||||||||||||||||||||||| ||||||    
T  48248138 ggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 48248050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 5745650 - 5745716
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatc 185  Q
    ||||||||||||  ||||||||| | |||||||||||| ||||  || |||||||||||||||||||    
T  5745650 acttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatc 5745716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 35578910 - 35578979
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||||| | |||||||||| ||||||| |||||| || |||| |||| ||||||||||||| ||||    
T  35578910 acttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtc 35578979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 4477702 - 4477790
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||| ||| ||||  ||||||||| |  ||||||||||| ||  ||||||||||||| ||| |||||||||||||||||    
T  4477702 ggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaact 4477790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 26048492 - 26048404
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| |||| || ||||||| | ||||||||| || || | ||||||||||||| |||||||| |||| ||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaact 26048404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 27245748 - 27245664
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||| |||||||||||| |  ||||||||  | |||||||||||| || |  || ||||||||||||||||||||||| ||||    
T  27245748 cttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 27245664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 11973935 - 11973862
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaa 194  Q
    |||||||||| |||||||||| | |  |||||| || |  | |||||||||||| |||||||||||||||||||    
T  11973935 ttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaa 11973862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 16081299 - 16081387
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||   |||||||| | |||| | ||||| || |  || ||||||||||||||||||||||| ||||||    
T  16081299 ggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 16081387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 28687593 - 28687681
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||| |  ||||||||| | |||||||||||| |  |  || || |||||||||||||||||||| ||||||    
T  28687593 ggcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaact 28687681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 32427564 - 32427488
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaat 184  Q
    |||| ||||| | |||||||| || ||||| || ||||||||||||||||||| | ||| || ||||| ||||||||    
T  32427564 ggctgaatcacatttttggtcatcacatttcgataagctcacgaaaatgatcacgtctccttcaaatcaaacaaaat 32427488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 189
Target Start/End: Complemental strand, 45815559 - 45815531
Alignment:
Q  161 tgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||||||||||||||||||||||||||    
T  45815559 tgcctcttttaaatcgaacaaaatcgtcc 45815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 31073688 - 31073600
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| ||||||||||| || |||| |||||||||||||||||||||| |||||||||||    
T  31073688 ggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaact 31073600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 31574271 - 31574183
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| |  |||| ||||||||||||||||||||||||||||||||||    
T  31574271 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaact 31574183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 35163733 - 35163645
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||| ||||||||||| |||||||||||||| |  ||||||||| ||||| ||||||||||||||||||||    
T  35163733 ggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaact 35163645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 5121015 - 5120927
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||||||||| |||||||||| | ||||||||| |  || | ||||||||||||||||||||||||||||||||||    
T  5121015 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaact 5120927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 32836542 - 32836454
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | |||||| ||||| |||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||| | ||||||    
T  32836542 ggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaact 32836454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 25468860 - 25468937
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||  ||||||||| | ||||||||| || ||||  |||||||||||||||||||||||||||||||||    
T  25468860 acttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaact 25468937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 835405 - 835482
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||| |||||| |  |||||||||||||| || ||||||||| |||||||||||||  |||||||||||    
T  835405 acttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaact 835482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 29891080 - 29891168
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||  ||||||||| | || |||||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  29891080 ggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaact 29891168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 35163195 - 35163265
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    |||||| |||||||||||||||| ||||||| |||||| || || |||||| ||||||||||||| |||||    
T  35163195 acttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcc 35163265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 835760 - 835695
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaat 184  Q
    |||||||||||||||||||| |  |||| ||||||||| || ||||||||| ||||||||||||||    
T  835760 acttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaat 835695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 24640728 - 24640643
Alignment:
Q  111 ttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||| ||||||||||||||  ||||||||  | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 24640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 31242817 - 31242878
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaaca 180  Q
    |||||||  |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||    
T  31242817 acttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaaca 31242878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 33095725 - 33095802
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||||||||||| |  ||||| |||||||| ||   ||||||| ||||||||||||| ||||||||||||    
T  33095725 acttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaact 33095802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 25472559 - 25472471
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||  ||||||||| | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  25472559 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaact 25472471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 32836018 - 32836088
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtcc 189  Q
    ||||||| |||| |||||||||| ||||||| |||| | || ||||||||| ||||||||||||| |||||    
T  32836018 acttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgtcc 32836088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 28636292 - 28636380
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | |||||||| | | |||||||| | ||||||||| || || | | ||||||||||||||||||||||| ||||||||    
T  28636292 ggcttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaact 28636380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 33096146 - 33096082
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaa 183  Q
    ||||||| || ||||||||| || |||||| ||||||| ||||| |||||| |||||||||||||    
T  33096146 acttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaa 33096082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 22534270 - 22534213
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcct 165  Q
    |||||||| | |||||||||||||| |||||||| | |||||||||||| || |||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcct 22534213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 5114468 - 5114556
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | ||||| ||||  ||||||||  | |||||||||||| || |  || ||||||||||||||||||||||| ||||||    
T  5114468 ggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 5114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 30251238 - 30251150
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||   |||||||| | ||||| |||||  ||||  || ||||||||||||||||||||||| ||||||    
T  30251238 ggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaact 30251150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 611 - 523
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||| ||||||||||||||| |||||||||||||| || ||||||||| |||||||||||||  ||| |||||||    
T  611 ggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaact 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 15113 - 15201
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| |||||||||||| |||||||||||| ||||| ||||||||||  ||||||||| ||||||||||||| |  |||||||||    
T  15113 ggcttaattatacttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaaacaaccctaaact 15201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 15644 - 15556
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | | ||||||| ||||||||||||  |||||||||||||| || || |||||| |||||||||||||  |||||||||||    
T  15644 ggcttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaact 15556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 210883 - 210795
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||| | ||||||||||||| ||||||||| | |||| ||||||| || ||||||||| ||||||||||||| ||||||||||||    
T  210883 ggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaact 210795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 205911 - 205825
Alignment:
Q  110 cttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||| | |||||| |||||| ||||||||| | |||||||||||| || ||||||||| ||||||||||||| ||||||||||||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaact 205825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 204939 - 205016
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    |||||||||||| | |||||||| |||||||||  ||| || | ||||||| ||||| |||||||| |||||||||||    
T  204939 acttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaact 205016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 205369 - 205446
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||| |||| | |||||||| |||||||||  ||| || | ||||||| |||||||||||| | |||||||||||    
T  205369 acttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaact 205446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 46277 - 46354
Alignment:
Q  119 acttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||||||||||||| | || ||||||||| |  | ||||||||||||||||||||||| ||||||||||    
T  46277 acttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaact 46354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 46814 - 46734
Alignment:
Q  108 ggcttaatcatacttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    |||||||| | ||||||||||||  ||||||||| | |||||||||||| || |   | ||||||||||||||||||||||    
T  46814 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtc 46734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 159032 - 159099
Alignment:
Q  121 ttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtc 188  Q
    ||||| |||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  159032 ttttgatcctcgcatttttaccagctcacgaaaatgatcctgcctctttcaaatcgaacaaaaccgtc 159099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 159391 - 159339
Alignment:
Q  144 gctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||| | ||||||    
T  159391 gctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaact 159339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 6930 - 6854
Alignment:
Q  120 cttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||| |||||||||| |  | |||||| || || | | ||||||||||||||||||||||| ||||||||    
T  6930 cttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaact 6854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 6948 - 6872
Alignment:
Q  120 cttttggtcctcgcattttgacaagctcacgaaaatgatcatgcctcttttaaatcgaacaaaatcgtccctaaact 196  Q
    ||||||||||| |||||||||| |  | |||||| || || | | ||||||||||||||||||||||| ||||||||    
T  6948 cttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaact 6872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University