View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18453_high_57 (Length: 240)
Name: NF18453_high_57
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18453_high_57 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 35042216 - 35041995
Alignment:
| Q |
1 |
attcctttgactattatttcatttcacaaattgtcaatttttctctcttatgatnnnnnnntaaatgagctagatcttatcaaatattgtgaaaaattat |
100 |
Q |
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| T |
35042216 |
attcctttcactattatttcatttcacaaattgtcaatttttctctcttatgataaaaaaataaatgagctagatcttatcaaatattgtgaaaaattat |
35042117 |
T |
|
| Q |
101 |
caagagagattgatataaatttattttctcaggtgtaatattaactctagagctttcatttccgacaagtttataatattttgcttagaaccatttagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35042116 |
caagagagattgatataaatttattttctcaggtgtaatattaactctagagctttcatttccgacaagtttataatattttgcttagaaccatttagaa |
35042017 |
T |
|
| Q |
201 |
ataaaacctcaagtgaattctg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
35042016 |
ataaaacctcaagtgaattctg |
35041995 |
T |
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