View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18453_high_68 (Length: 207)
Name: NF18453_high_68
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18453_high_68 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 41132032 - 41131857
Alignment:
| Q |
17 |
aatatataaatgggtctcttagcaagccccaaggttatattctctctactctcctaaccccgttctaaaactcaataggtacacacaccccaccgtttca |
116 |
Q |
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| T |
41132032 |
aatatataaatgggtctcttagcaagccccaaggttatgttctctctactcttctaaccccgttctaaaactcaataggtacacacactccaccgtttca |
41131933 |
T |
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| Q |
117 |
gaggaaacaaccaccctaaaacacagcatcggtagtcaccttctgattaggtatgatcaaaaactaacaaaaagat |
192 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
41131932 |
gaggaaacaaccaccctaaaacacagcatcgatagtcaccttctgattaggtacgatcaaaaactaacaaaaagat |
41131857 |
T |
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