View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18453_low_29 (Length: 409)

Name: NF18453_low_29
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18453_low_29
NF18453_low_29
[»] chr5 (20 HSPs)
chr5 (1-394)||(15672518-15672921)
chr5 (189-304)||(16548868-16548983)
chr5 (189-304)||(7125188-7125303)
chr5 (190-304)||(21489863-21489977)
chr5 (189-304)||(28623190-28623305)
chr5 (198-304)||(1460830-1460936)
chr5 (189-295)||(29716814-29716920)
chr5 (189-304)||(5651210-5651325)
chr5 (193-304)||(4549937-4550048)
chr5 (193-304)||(13926343-13926454)
chr5 (193-304)||(39852782-39852893)
chr5 (189-295)||(29758678-29758783)
chr5 (193-304)||(4240145-4240256)
chr5 (203-296)||(37014274-37014367)
chr5 (193-304)||(40013384-40013495)
chr5 (193-304)||(5949524-5949634)
chr5 (189-268)||(2675097-2675176)
chr5 (193-304)||(13999773-13999884)
chr5 (189-304)||(37798143-37798257)
chr5 (189-245)||(21238782-21238838)
[»] chr4 (32 HSPs)
chr4 (189-301)||(871776-871887)
chr4 (189-304)||(55165488-55165603)
chr4 (193-304)||(30967021-30967132)
chr4 (189-304)||(8084172-8084287)
chr4 (189-304)||(29469126-29469241)
chr4 (193-296)||(49501211-49501314)
chr4 (193-296)||(49507276-49507379)
chr4 (193-296)||(41725533-41725636)
chr4 (198-304)||(32322478-32322584)
chr4 (193-304)||(23987609-23987719)
chr4 (189-304)||(29510091-29510206)
chr4 (193-304)||(29855928-29856039)
chr4 (189-304)||(32889859-32889974)
chr4 (190-268)||(33138799-33138877)
chr4 (189-304)||(23671399-23671514)
chr4 (193-304)||(28484307-28484419)
chr4 (221-304)||(5800376-5800459)
chr4 (189-300)||(6487343-6487454)
chr4 (193-304)||(27768476-27768587)
chr4 (193-304)||(49834512-49834623)
chr4 (193-296)||(50018612-50018715)
chr4 (221-304)||(54853182-54853265)
chr4 (198-268)||(14334393-14334463)
chr4 (203-304)||(54341554-54341655)
chr4 (236-304)||(32683749-32683816)
chr4 (193-304)||(48261490-48261601)
chr4 (189-268)||(50517192-50517271)
chr4 (193-304)||(51321268-51321379)
chr4 (189-266)||(42937436-42937513)
chr4 (189-268)||(46286708-46286787)
chr4 (192-268)||(24966547-24966623)
chr4 (228-304)||(37916213-37916289)
[»] chr8 (24 HSPs)
chr8 (189-304)||(8029863-8029978)
chr8 (189-304)||(17234677-17234792)
chr8 (189-304)||(19484178-19484293)
chr8 (189-304)||(7760771-7760886)
chr8 (193-304)||(9288172-9288283)
chr8 (193-304)||(10295017-10295128)
chr8 (189-304)||(12522530-12522645)
chr8 (193-304)||(18958405-18958516)
chr8 (193-304)||(31625720-31625831)
chr8 (190-304)||(6388149-6388263)
chr8 (188-296)||(32497961-32498069)
chr8 (193-304)||(19717552-19717663)
chr8 (189-268)||(24067105-24067184)
chr8 (193-304)||(26856517-26856628)
chr8 (193-304)||(39467196-39467307)
chr8 (193-304)||(42305282-42305393)
chr8 (193-303)||(43308186-43308296)
chr8 (191-304)||(37131311-37131415)
chr8 (193-296)||(18305654-18305757)
chr8 (221-304)||(43166382-43166465)
chr8 (193-304)||(16364118-16364229)
chr8 (193-304)||(14781810-14781921)
chr8 (193-304)||(44725469-44725580)
chr8 (228-276)||(12522483-12522531)
[»] chr3 (35 HSPs)
chr3 (189-304)||(7665554-7665669)
chr3 (189-304)||(8598622-8598737)
chr3 (189-304)||(49296079-49296194)
chr3 (189-304)||(53835925-53836040)
chr3 (198-304)||(48379560-48379666)
chr3 (189-304)||(21386507-21386622)
chr3 (189-304)||(45602440-45602555)
chr3 (198-304)||(7437603-7437709)
chr3 (191-268)||(25049870-25049947)
chr3 (193-304)||(52810768-52810879)
chr3 (193-304)||(17946638-17946749)
chr3 (213-304)||(21718460-21718551)
chr3 (193-304)||(26107739-26107850)
chr3 (193-304)||(37455257-37455368)
chr3 (193-304)||(39038500-39038611)
chr3 (193-296)||(50761779-50761882)
chr3 (193-304)||(52617651-52617762)
chr3 (191-304)||(43172890-43173003)
chr3 (193-301)||(20833310-20833418)
chr3 (204-304)||(54629261-54629361)
chr3 (193-296)||(23753068-23753171)
chr3 (193-296)||(31645940-31646043)
chr3 (189-296)||(33693227-33693334)
chr3 (193-304)||(51737366-51737477)
chr3 (202-304)||(44905543-44905645)
chr3 (189-303)||(9818587-9818701)
chr3 (198-304)||(18750053-18750159)
chr3 (189-304)||(4962754-4962869)
chr3 (221-304)||(40897541-40897624)
chr3 (193-292)||(50902988-50903087)
chr3 (230-304)||(45863233-45863307)
chr3 (189-268)||(16155163-16155242)
chr3 (189-304)||(42736270-42736385)
chr3 (189-267)||(49458358-49458436)
chr3 (201-245)||(40198732-40198776)
[»] chr1 (39 HSPs)
chr1 (189-303)||(52182311-52182425)
chr1 (195-304)||(49971624-49971733)
chr1 (189-304)||(4005051-4005166)
chr1 (189-304)||(1243328-1243443)
chr1 (189-304)||(8147301-8147416)
chr1 (189-304)||(9192008-9192123)
chr1 (189-304)||(41353405-41353520)
chr1 (189-304)||(51106876-51106991)
chr1 (189-295)||(27257880-27257986)
chr1 (221-304)||(25830953-25831036)
chr1 (189-304)||(26757599-26757714)
chr1 (189-304)||(45272978-45273093)
chr1 (189-304)||(48966513-48966628)
chr1 (191-304)||(5494772-5494885)
chr1 (189-304)||(3583578-3583693)
chr1 (193-304)||(15834710-15834821)
chr1 (193-304)||(46328397-46328508)
chr1 (203-304)||(8140919-8141020)
chr1 (192-296)||(47371600-47371704)
chr1 (189-304)||(28403968-28404083)
chr1 (189-267)||(11579122-11579200)
chr1 (198-304)||(38535827-38535933)
chr1 (198-304)||(38558045-38558151)
chr1 (189-304)||(5209390-5209505)
chr1 (193-304)||(6312987-6313098)
chr1 (193-304)||(25612503-25612614)
chr1 (193-304)||(29396110-29396221)
chr1 (189-303)||(1108337-1108451)
chr1 (190-304)||(9322181-9322295)
chr1 (189-304)||(49236988-49237103)
chr1 (202-304)||(49453095-49453198)
chr1 (251-304)||(19863040-19863093)
chr1 (203-304)||(51702006-51702107)
chr1 (189-268)||(7798520-7798599)
chr1 (236-295)||(25253486-25253545)
chr1 (200-266)||(32760132-32760198)
chr1 (193-270)||(18798897-18798974)
chr1 (252-304)||(28387152-28387204)
chr1 (189-296)||(35177232-35177340)
[»] chr6 (18 HSPs)
chr6 (189-304)||(1463693-1463808)
chr6 (189-304)||(6788063-6788178)
chr6 (189-304)||(16438669-16438784)
chr6 (189-304)||(10113802-10113917)
chr6 (189-304)||(3000203-3000318)
chr6 (189-296)||(31975674-31975781)
chr6 (193-304)||(7497509-7497620)
chr6 (193-304)||(14262115-14262226)
chr6 (189-266)||(13461374-13461451)
chr6 (193-304)||(31067843-31067954)
chr6 (230-296)||(30384780-30384846)
chr6 (192-268)||(28900863-28900939)
chr6 (221-304)||(34758786-34758869)
chr6 (189-303)||(8779603-8779717)
chr6 (189-267)||(31996270-31996348)
chr6 (193-304)||(4200130-4200241)
chr6 (193-304)||(31896048-31896159)
chr6 (260-304)||(1452072-1452116)
[»] chr7 (37 HSPs)
chr7 (189-304)||(14741389-14741504)
chr7 (189-304)||(26201812-26201927)
chr7 (189-304)||(4639896-4640011)
chr7 (189-296)||(12740788-12740895)
chr7 (193-304)||(37328317-37328428)
chr7 (193-304)||(37972561-37972672)
chr7 (201-304)||(43172117-43172220)
chr7 (193-296)||(44256439-44256542)
chr7 (190-304)||(32884181-32884295)
chr7 (219-304)||(33383084-33383169)
chr7 (193-302)||(40460398-40460507)
chr7 (193-304)||(18838820-18838931)
chr7 (189-304)||(27148808-27148923)
chr7 (193-304)||(33891918-33892029)
chr7 (221-304)||(39028497-39028580)
chr7 (189-304)||(42610580-42610695)
chr7 (192-266)||(11735215-11735289)
chr7 (219-304)||(29893382-29893467)
chr7 (204-296)||(8675749-8675841)
chr7 (193-304)||(510056-510167)
chr7 (193-304)||(7993567-7993678)
chr7 (193-304)||(28034532-28034643)
chr7 (193-304)||(28342721-28342832)
chr7 (193-304)||(29585924-29586035)
chr7 (193-304)||(39784517-39784628)
chr7 (198-301)||(44121622-44121725)
chr7 (189-267)||(33497115-33497193)
chr7 (203-304)||(29614489-29614590)
chr7 (219-304)||(16709398-16709483)
chr7 (219-304)||(17683634-17683719)
chr7 (230-304)||(23101701-23101775)
chr7 (202-304)||(41827738-41827840)
chr7 (189-271)||(48136908-48136990)
chr7 (191-268)||(37392648-37392725)
chr7 (189-265)||(14732317-14732393)
chr7 (201-267)||(37915930-37915996)
chr7 (231-296)||(3023352-3023417)
[»] chr2 (31 HSPs)
chr2 (189-304)||(18899951-18900066)
chr2 (193-304)||(10657842-10657953)
chr2 (189-304)||(15224193-15224308)
chr2 (193-304)||(28739973-28740084)
chr2 (198-304)||(379342-379448)
chr2 (189-267)||(15926378-15926456)
chr2 (186-304)||(25288575-25288693)
chr2 (189-304)||(31847241-31847357)
chr2 (189-300)||(3858445-3858556)
chr2 (202-304)||(13833107-13833209)
chr2 (193-304)||(6224256-6224367)
chr2 (193-304)||(18177683-18177794)
chr2 (250-304)||(34342201-34342255)
chr2 (254-304)||(43305060-43305110)
chr2 (203-304)||(7027315-7027416)
chr2 (189-266)||(13898477-13898554)
chr2 (189-266)||(14039094-14039171)
chr2 (221-296)||(28845005-28845080)
chr2 (230-304)||(214973-215047)
chr2 (202-304)||(2308750-2308852)
chr2 (189-303)||(38413477-38413591)
chr2 (189-275)||(40829628-40829714)
chr2 (192-304)||(11153376-11153488)
chr2 (241-304)||(3464052-3464115)
chr2 (193-296)||(26789205-26789308)
chr2 (193-267)||(1833733-1833807)
chr2 (189-267)||(35404342-35404420)
chr2 (193-266)||(32242233-32242306)
chr2 (189-266)||(32293914-32293990)
chr2 (268-304)||(1833799-1833835)
chr2 (189-245)||(24025870-24025926)
[»] scaffold1128 (1 HSPs)
scaffold1128 (191-304)||(929-1042)
[»] scaffold1504 (1 HSPs)
scaffold1504 (221-304)||(1278-1361)
[»] scaffold0543 (1 HSPs)
scaffold0543 (193-304)||(10936-11047)
[»] scaffold0042 (1 HSPs)
scaffold0042 (193-304)||(57743-57854)
[»] scaffold0110 (1 HSPs)
scaffold0110 (189-296)||(39310-39417)
[»] scaffold0013 (1 HSPs)
scaffold0013 (189-304)||(89243-89358)
[»] scaffold0573 (1 HSPs)
scaffold0573 (192-268)||(8855-8931)
[»] scaffold0263 (1 HSPs)
scaffold0263 (257-304)||(490-537)


Alignment Details
Target: chr5 (Bit Score: 278; Significance: 1e-155; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 394
Target Start/End: Original strand, 15672518 - 15672921
Alignment:
Q  1 acaaagaccacaacgcatatatactgaatgccaaaacccaaagacccttacaacaaagcacccaaaataatgaagcaaagctatacgataaataaaccaa 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  15672518 acaaagaccacaacgcatatatacggaatgccgaaacccaaagacccttacaaaaaagcacccaaaataatgaagcaaagctatatgataaataaaccaa 15672617  T
Q  101 acgcataactatgcttcaccactaataagcaataaaaccgaaaacaattgcaggaggaaaaccaacaccctgtgcacaaaccaacacccgtcaaacattc 200  Q
    ||| |||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15672618 acgtataactctgcttcaccacc--taagcaataaaaccgaaaacaattgcaggaggaaaaccaacaccctgtgcacaaaccaacaccggtcaaacattc 15672715  T
Q  201 cgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtgga 300  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||||||| |||||||||  ||||||||||| ||||||||||    
T  15672716 cgattttaccataaatcaagtttatctttgagttgacacgattttagtacctaaaaacataaactcagtaaactcggcgagttaacacttgatttgtgga 15672815  T
Q  301 acatataatatgtt------------aatgaatgtttggtttgaaattgtgtaggaagaaataattgttaggaatatcataatatatcttatggttaggt 388  Q
    |||||||||||| |            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15672816 acatataatatggtaatgaatgttggaatgaatgtttggtttgaaattgtgtaggaagaaataattgttaggcatatcataatatatcttatggttaggt 15672915  T
Q  389 ggttaa 394  Q
     |||||    
T  15672916 agttaa 15672921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 16548868 - 16548983
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||| ||||||||||| ||||  |||||| |||||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||||||    
T  16548868 cgtcaaacatttcgattttaccagaaattgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcgataaactcaatgagttaacac 16548967  T
Q  289 tcgatttgtggaacat 304  Q
    ||||||| ||||||||    
T  16548968 tcgatttatggaacat 16548983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 7125188 - 7125303
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  7125188 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 7125287  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  7125288 gcgatttgtggaacat 7125303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 304
Target Start/End: Complemental strand, 21489977 - 21489863
Alignment:
Q  190 gtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacact 289  Q
    ||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||| || |||||||| ||||| ||  |||||| ||  ||||||||||    
T  21489977 gtcaaacattcagattttaccagaaatcaagtttatcttcgaattgacacgattttggtacctaaaaatgtaaaatcaataaacttgaaaagttaacact 21489878  T
Q  290 cgatttgtggaacat 304  Q
    |||||||||||||||    
T  21489877 cgatttgtggaacat 21489863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 28623190 - 28623305
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || | ||||||||| ||||| |||||||||||||||| ||||| ||||||  |||||| ||||||||||| |||||||| |||||| ||||    
T  28623190 cgtcaaactttgcaattttaccagaaatcgagtttatctccgagttaacacgtttttagcacctaaacacgtaaactcgataaactcgctgagttgacac 28623289  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  28623290 gcgatttgtggaacat 28623305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 1460830 - 1460936
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||||||||||||| ||| | |||||| ||| ||||| |||| ||||| || |||||||||||||||||||||| ||| | ||||||||||||||||||     
T  1460830 ttccgattttaccagaaaccgagtttacctctgagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcaaagagttaacactcgatttgc 1460929  T
Q  298 ggaacat 304  Q
    |||||||    
T  1460930 ggaacat 1460936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 29716814 - 29716920
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||| |||||||||| |||||||||||| || |||||| ||||||||||  | ||||||||||||||||| ||||||| |  ||||||||||    
T  29716814 cgtcaaaccttctgattttaccagaaatcaagtttaccttcgagttaacacgattttgatacctaaaaacgtaaactccgtaaacttggagagttaacac 29716913  T
Q  289 tcgattt 295  Q
    |||||||    
T  29716914 tcgattt 29716920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 5651210 - 5651325
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || | |||| |||| ||||| |||||| ||||||||| |||||||||| || |||||| ||||||| ||| ||||||||| | ||||||||    
T  5651210 cgtcaaacttttcaatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaaatcgataaactcgaagtgttaacac 5651309  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  5651310 tcgatttgcggaacat 5651325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 4549937 - 4550048
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||| ||||||||||||||| ||||  ||||||||||||||    
T  4549937 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaacacgtaaactcggtaatctcggagagttaacactcga 4550036  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  4550037 tttgcggaacat 4550048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 13926454 - 13926343
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||||||||||||| ||| ||||  ||||||||||||||    
T  13926454 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcga 13926355  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  13926354 tttgcggaacat 13926343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 39852893 - 39852782
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||||| | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  ||||||||||||||    
T  39852893 aaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcga 39852794  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  39852793 tttgcggaacat 39852782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 29758783 - 29758678
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||||||||||||| |||| ||||||| | || ||||||||| ||||||||||  | |||||||||||||||||| ||||||  | ||||||||||    
T  29758783 cgtcaaacattccgattt-accagaaatcaaatctacctccgagttaacacgattttgatacctaaaaacgtaaactcgataaacttaacgagttaacac 29758685  T
Q  289 tcgattt 295  Q
    || ||||    
T  29758684 tcaattt 29758678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 4240145 - 4240256
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| |||   |||||| ||| ||||| |||||||||| |  |||||||||||||||||||||| |||   |||||||||||| |    
T  4240145 aaaccttccgattttaccagaaacggagtttacctcagagttaacacgatttttgcacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 4240244  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  4240245 tttgcggaacat 4240256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 296
Target Start/End: Complemental strand, 37014367 - 37014274
Alignment:
Q  203 attttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttg 296  Q
    ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  37014367 attttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttg 37014274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 40013384 - 40013495
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| ||||||||||  | | |||||| ||||||||||||| ||||  ||||||||||||||    
T  40013384 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacttaaaaatgtaaactcggtaatctcggagagttaacactcga 40013483  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  40013484 tttgcggaacat 40013495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 5949634 - 5949524
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||||||||||| | ||| ||||  ||||||| ||||||    
T  5949634 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact-gataatctcggagagttaatactcga 5949536  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  5949535 tttgcggaacat 5949524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 2675097 - 2675176
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||||| || |||||| |||| ||||| |||||| ||||||||| ||||| ||||    |||||||||||||||||||    
T  2675097 cgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgg 2675176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 13999773 - 13999884
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | ||||||||  |||| |||||||||| || |||||||| || |||||  ||| ||||  || |||||||||||    
T  13999773 aaaccttccaattttaccagaaaccgattttatctcaaagttaacacgatttttgtacctaaaaatgtcaactccataatctcggagatttaacactcga 13999872  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  13999873 tttgcggaacat 13999884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 37798143 - 37798257
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || ||||||||||| ||||  |||||| ||  ||||| ||||| |||||     |||| ||||||||||||||||||||  ||||| ||||    
T  37798143 cgtcaaacttttcgattttaccagaaattgagtttacctttgagttaacacgtttttaacagataaacacgtaaactcggtaaactcgccgagttgacac 37798242  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  37798243 -cgatttgtggaacat 37798257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 21238782 - 21238838
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgatttt 245  Q
    |||||||| |||||||||||||| ||| | |||||| ||||||||| ||||| ||||    
T  21238782 cgtcaaactttccgattttaccaaaaaccgagtttacctccgagttaacacgttttt 21238838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 871887 - 871776
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||    
T  871887 cgtcaaacattccgattttaccagaaatcgagtttacctccgagttgacacgatttg-gtacctaaaaacgtaaactcggtaaactcgacgagttaacac 871789  T
Q  289 tcgatttgtggaa 301  Q
    ||||||| |||||    
T  871788 tcgatttatggaa 871776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 55165603 - 55165488
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||| | |||||||| || | ||||||||||||||| |||||||||| |||||| |||    
T  55165603 cgtcaaacattctgattttaccataaatcaagtttacctccaagttaatacgattttggtacgtaaaaacgtaaactcagtaaactcgacgagttagcac 55165504  T
Q  289 tcgatttgtggaacat 304  Q
    ||||||||||||||||    
T  55165503 tcgatttgtggaacat 55165488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 30967021 - 30967132
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| ||| |||||||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||    
T  30967021 aaaccttccaattttaccagaaaccaattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 30967120  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  30967121 tttgcggaacat 30967132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 8084287 - 8084172
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||| | ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  8084287 cgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 8084188  T
Q  289 tcgatttgtggaacat 304  Q
     || ||||||||||||    
T  8084187 gcggtttgtggaacat 8084172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 29469241 - 29469126
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  || || ||||    
T  29469241 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgaattgacac 29469142  T
Q  289 tcgatttgtggaacat 304  Q
     ||||||||| |||||    
T  29469141 gcgatttgtgaaacat 29469126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 49501211 - 49501314
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||    
T  49501211 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 49501310  T
Q  293 tttg 296  Q
    ||||    
T  49501311 tttg 49501314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 49507276 - 49507379
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||    
T  49507276 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 49507375  T
Q  293 tttg 296  Q
    ||||    
T  49507376 tttg 49507379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 41725636 - 41725533
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||||| |||||| ||| ||||| |||||||||| || |||||||||||||||| ||||| | ||  ||||||||||||||    
T  41725636 aaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactaggtaatcacggagagttaacactcga 41725537  T
Q  293 tttg 296  Q
    ||||    
T  41725536 tttg 41725533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 32322584 - 32322478
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||||||||||||| ||| | |||||| ||| || || |||||||||| || |||||||||||||||||||||| ||||  |||||||||||||| |||     
T  32322584 ttccgattttaccagaaaccgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgacttgc 32322485  T
Q  298 ggaacat 304  Q
    |||||||    
T  32322484 ggaacat 32322478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 23987719 - 23987609
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| ||| |||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||| ||||||||||    
T  23987719 aaaccttccaattttaccagaaaccaa-tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaggtaacactcga 23987621  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  23987620 tttgcggaacat 23987609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 29510091 - 29510206
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||| |||||||||| ||||  ||||||  || ||||| ||||||||||  | |||||| ||||||||||| ||||||||  ||||||||||    
T  29510091 cgtcaaaccttctgattttaccagaaattgagtttacatcagagttaacacgattttgatacctaaacacgtaaactcgataaactcggagagttaacac 29510190  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  29510191 tcgatttgcggaacat 29510206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 29856039 - 29855928
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||||| |||||| ||| ||||| |||||||||| || | |||||||||||||||||||| ||||  || |||| ||||||    
T  29856039 aaaccttccaattttaccagaaatcgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcggagaattaatactcga 29855940  T
Q  293 tttgtggaacat 304  Q
    ||| ||||||||    
T  29855939 tttatggaacat 29855928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 32889974 - 32889859
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||| |||||||||| ||||  ||||||  ||  |||| |||||||||| || |||||| |||||||||||||||| |||  ||||||||||    
T  32889974 cgtcaaaccttctgattttaccagaaattgagtttacatcaaagttaacacgattttggtacctaaacacgtaaactcggtaaattcggagagttaacac 32889875  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  32889874 tcgatttgcggaacat 32889859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 33138877 - 33138799
Alignment:
Q  190 gtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    ||||||| |||||||||||||| ||||| |||||| ||||||||| |||||||||| || |||||| ||||||||||||    
T  33138877 gtcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcgg 33138799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 23671399 - 23671514
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || |||||| |||| ||||| |||||| ||||||||| |||||||||| || |||||| |||||||  ||||||||||   | | ||||||    
T  23671399 cgtcaaacttttcgatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaaaccggtaaactcagagtgctaacac 23671498  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  23671499 tcgatttgcggaacat 23671514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 28484419 - 28484307
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacga-ttttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcg 291  Q
    |||| |||| ||||||||| ||| | |||||| ||| ||||| |||||| |||| || |||||||||||||||||||||| |||   ||||||||||||     
T  28484419 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgactttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactca 28484320  T
Q  292 atttgtggaacat 304  Q
    ||||| |||||||    
T  28484319 atttgcggaacat 28484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 5800459 - 5800376
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  |||||||||||||||||| |||||||    
T  5800459 tttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcgatttgcggaacat 5800376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 6487343 - 6487454
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||||||||| |||| ||||| |||||| ||||||||| ||||| ||||    |||||||||||||||||||  || |  | | ||||||||    
T  6487343 cgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgggcaagtttacgtgttaacac 6487442  T
Q  289 tcgatttgtgga 300  Q
    ||||||||||||    
T  6487443 tcgatttgtgga 6487454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 27768587 - 27768476
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || |||||||||||    
T  27768587 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 27768488  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  27768487 tttgcggaacat 27768476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 49834512 - 49834623
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| |||||||||| ||  ||||||||||||||||||||| ||    |||||||||||| |    
T  49834512 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtagctaaaaacgtaaactcggtaatcttagagagttaacactcaa 49834611  T
Q  293 tttgtggaacat 304  Q
    |||  |||||||    
T  49834612 tttacggaacat 49834623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 50018715 - 50018612
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| ||| |||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  50018715 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 50018616  T
Q  293 tttg 296  Q
    ||||    
T  50018615 tttg 50018612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 54853182 - 54853265
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||| ||| ||||| |||| ||||| || | |||||| ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  54853182 tttacctcagagttaacacaatttttgtacataaaaaggtaaactcggtaatctcggagagttaacactcgatttgtggaacat 54853265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 14334463 - 14334393
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||||||||||| ||| ||||||||  |||||||| || ||||||| || |||||||||||||||||||    
T  14334463 ttccgattttaccaaaaaacaagtttacgtccgagtttacgcgattttggtacctaaaaacgtaaactcgg 14334393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 54341655 - 54341554
Alignment:
Q  203 attttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaac 302  Q
    ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || ||||||||||||||| |||||    
T  54341655 attttaccagaaaccgattttacctcagagtttacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaac 54341556  T
Q  303 at 304  Q
    ||    
T  54341555 at 54341554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 32683749 - 32683816
Alignment:
Q  236 acacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||||||| || ||||||||||||| |||||||| |||   ||||||||||||||||||||||||||    
T  32683749 acacgatttttgtacctaaaaacgtaa-ctcggtaatctctgagagttaacactcgatttgtggaacat 32683816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 48261601 - 48261490
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| || |||||| ||| ||||  || |||||||||||    
T  48261601 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcga 48261502  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  48261501 tttgcggaacat 48261490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 50517271 - 50517192
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||||| |||| ||||||||| ||||| |||||| |||  |||| |||||||||| || |||||| ||||||||||||    
T  50517271 cgtcaaaccttccaattttaccagaaatcgagtttacctcaaagttaacacgattttggtacctaaacacgtaaactcgg 50517192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 51321379 - 51321268
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | ||||  || ||||| |||||||||| || |||||||| ||||||||| |||  |||  ||||||||||||||    
T  51321379 aaaccttccaattttaccagaaaccgattttacgtcagagttaacacgatttttgtacctaaaaatgtaaactcgataatatcggagagttaacactcga 51321280  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  51321279 tttgcggaacat 51321268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 42937436 - 42937513
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    |||||||| || ||||||||||| ||||| |||||| ||||||||| | ||| ||||||  |||||| ||||||||||    
T  42937436 cgtcaaacttttcgattttaccagaaatcgagtttacctccgagttaaaacgcttttagcacctaaatacgtaaactc 42937513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 46286787 - 46286708
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||||| |||||| ||||| | ||||| |||||| ||  | ||| |||||||||| || |||||||||||||||||||    
T  46286787 cgtcaaaccttccgagtttactagaaatcgagtttaccttagtgttaacacgattttggtacctaaaaacgtaaactcgg 46286708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 24966547 - 24966623
Alignment:
Q  192 caaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    ||||| |||| ||||||||| ||| | | ||||  |||||||| |||||||||| || |||||| ||||||||||||    
T  24966547 caaaccttcccattttaccaaaaaccgaatttacttccgagttaacacgattttggtacctaaacacgtaaactcgg 24966623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 37916289 - 37916213
Alignment:
Q  228 ccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||||| |||| ||||| || | |||||| ||||||||| ||| ||||  |||||||||||| ||||| |||||||    
T  37916289 ccgagttaacacaatttttgtacataaaaatgtaaactcgataatctcggagagttaacactcaatttgcggaacat 37916213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 8029863 - 8029978
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||||||| ||||| |||||||||| || |||||| ||||||||||| ||||||||| ||||||||||    
T  8029863 cgtcaaaccttccgattttaccagaaatcgagtttatctcagagttaacacgattttggtacctaaacacgtaaactcgataaactcgaagagttaacac 8029962  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||  |||||||    
T  8029963 tcgatttacggaacat 8029978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 17234792 - 17234677
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||| | |||||| || |||||||||| ||||| |||||||||   |||||||||     
T  17234792 cgtcaaacattccgattttaccagaaatcgagtttacctccgagttgataggattttggtacctaaaaacgcaaacttggtaaactcagcgagttaacat 17234693  T
Q  289 tcgatttgtggaacat 304  Q
    ||||||||| ||||||    
T  17234692 tcgatttgttgaacat 17234677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 19484293 - 19484178
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| || |||||||||||||||||  ||||| ||||    
T  19484293 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacac 19484194  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  19484193 gcgatttgtggaacat 19484178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 7760886 - 7760771
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||| |  ||||||| || ||||||| |||| || |||||||||||||||||  | ||||||||  ||||||| ||||||||||| |||||||||    
T  7760886 cgtcaaacaatttgattttatcagaaatcaaatttaccttcgagttgacacgattttgatacctaaaaatataaactcagtaaactcgataagttaacac 7760787  T
Q  289 tcgatttgtggaacat 304  Q
    ||||||||||||||||    
T  7760786 tcgatttgtggaacat 7760771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 9288172 - 9288283
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  9288172 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaagagttaacactcga 9288271  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  9288272 tttgcggaacat 9288283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 10295017 - 10295128
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| |||||||| | || |||||||||||||||||||||| ||||  ||||||||||||||    
T  10295017 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgattgttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 10295116  T
Q  293 tttgtggaacat 304  Q
    |||  |||||||    
T  10295117 tttacggaacat 10295128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 12522530 - 12522645
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||| | |||||| ||| ||||| |||||||||| || |||||||| | |||||  |||||||||  ||||||||||    
T  12522530 cgtcaaaccttccgattttaccagaaaccgagtttacctctgagttaacacgattttggtacctaaaaatgcaaacttagtaaactcggagagttaacac 12522629  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  12522630 tcgatttgcggaacat 12522645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 18958405 - 18958516
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| ||| |||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  18958405 aaaccttccaattttaccagaaaccaattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 18958504  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  18958505 tttgcggaacat 18958516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 31625831 - 31625720
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| |||| ||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  31625831 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 31625732  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  31625731 tttgcggaacat 31625720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 6388149 - 6388263
Alignment:
Q  190 gtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacact 289  Q
    ||||||| ||||||||||||||||||   |||||| ||||||||| |||||||||| || ||||||||| |||| ||| ||||||||  |||||| ||||    
T  6388149 gtcaaactttccgattttaccataaacagagtttacctccgagttaacacgattttggtacctaaaaacataaattcgataaactcggcgagttaccact 6388248  T
Q  290 cgatttgtggaacat 304  Q
    | ||||| |||||||    
T  6388249 caatttgcggaacat 6388263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 32498069 - 32497961
Alignment:
Q  188 ccgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaaca 287  Q
    |||| |||| |||||||||||| | ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  |||||||||    
T  32498069 ccgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaaca 32497970  T
Q  288 ctcgatttg 296  Q
    ||| |||||    
T  32497969 ctcaatttg 32497961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 19717552 - 19717663
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  19717552 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 19717651  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  19717652 tttgcggaacat 19717663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 24067184 - 24067105
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||||||| |||||||||||| ||||  |||| | |||||||||||||||||||| || |||||||||||||||||||    
T  24067184 cgtcaaacatgccgattttaccagaaattgagttcacctccgagttgacacgattttggtacctaaaaacgtaaactcgg 24067105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 26856628 - 26856517
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| ||| |||||||||| ||| | |||||| ||| ||||| |||||||||| || |||| |||| |||||||||||| ||||  ||||||||||||||    
T  26856628 aaaccttctgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctataaacataaactcggtaatctcggagagttaacactcga 26856529  T
Q  293 tttgtggaacat 304  Q
    |||||| |||||    
T  26856528 tttgtgtaacat 26856517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 39467196 - 39467307
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||||||| |||| ||  ||||| | |||||||| || ||||||||||||||| |||||| ||||  ||||||||||||||    
T  39467196 aaaccttccaattttaccagaaatcaattttaccttagagttaatacgatttttgtacctaaaaacgtaaacgcggtaatctcggagagttaacactcga 39467295  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  39467296 tttgcggaacat 39467307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 42305282 - 42305393
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| ||||||||||  | |||||||| ||||||||||||| ||||  ||||||||||||||    
T  42305282 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaaggtaaactcggtaatctcggagagttaacactcga 42305381  T
Q  293 tttgtggaacat 304  Q
    ||||||||||||    
T  42305382 tttgtggaacat 42305393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 43308186 - 43308296
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | ||||| || ||||| |||||||||| || |||||||||| ||||||| ||| ||||| ||||||||||||||    
T  43308186 aaaccttccaattttaccagaaaccgattttatatcagagttaacacgattttggtacctaaaaacgcaaactcgataatctcgaagagttaacactcga 43308285  T
Q  293 tttgtggaaca 303  Q
    |||| ||||||    
T  43308286 tttgcggaaca 43308296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 37131311 - 37131415
Alignment:
Q  191 tcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactc 290  Q
    |||||||||| |||||||||| || || |||||| |||||||||||||||||||| || ||||||||          |||||||||| ||||||||||||    
T  37131311 tcaaacattctgattttaccagaagtcgagtttacctccgagttgacacgattttggtacctaaaaa---------tgtaaactcgacgagttaacactc 37131401  T
Q  291 gatttgtggaacat 304  Q
    ||||||||||||||    
T  37131402 gatttgtggaacat 37131415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 18305654 - 18305757
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || ||||||||||||| |||||||| ||||  ||||||||||||||    
T  18305654 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 18305753  T
Q  293 tttg 296  Q
    ||||    
T  18305754 tttg 18305757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 43166382 - 43166465
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||| ||| ||||| |||||||||| || |||||||||||||||||||||| |||||  | ||||||||||||||| |||||||    
T  43166382 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaaaaattaacactcgatttgcggaacat 43166465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 16364229 - 16364118
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||| | ||| | | |||| ||  ||||| |||||||||| || |||||||||||||| ||| ||| |||   ||||||||||||||    
T  16364229 aaaccttccgattttactagaaaccgaatttaccttagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcatagagttaacactcga 16364130  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  16364129 tttgcggaacat 16364118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 14781810 - 14781921
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| ||||||||||  | |||||||| || |||||| ||| ||||  || |||||||||||    
T  14781810 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaatgtcaactcgataatctcggagatttaacactcga 14781909  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  14781910 tttgcggaacat 14781921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 44725469 - 44725580
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| |||| |||| ||| |||   || |||||||||||    
T  44725469 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaatctcgataatctctgagatttaacactcga 44725568  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  44725569 tttgcggaacat 44725580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 12522483 - 12522531
Alignment:
Q  228 ccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcg 276  Q
    ||||||| |||||||||| || |||||||||||||||| ||||| ||||    
T  12522483 ccgagttaacacgattttggtacctaaaaacgtaaacttggtaagctcg 12522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 7665669 - 7665554
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||| ||||||||||||||| ||||| |||||| ||||||||| |||||||||| ||  ||||||||||||||| |||||| |||  ||||||||||    
T  7665669 cgtcaaatattccgattttaccaaaaatcgagtttacctccgagttaacacgattttggtagctaaaaacgtaaactaggtaaattcggcgagttaacac 7665570  T
Q  289 tcgatttgtggaacat 304  Q
    ||||||||||||||||    
T  7665569 tcgatttgtggaacat 7665554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 8598737 - 8598622
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  8598737 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 8598638  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  8598637 gcgatttgtggaacat 8598622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 49296194 - 49296079
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || ||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  49296194 cgtcaaacttttcgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 49296095  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  49296094 gcgatttgtggaacat 49296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 53836040 - 53835925
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| |||||||||||| |||| |||| ||||| ||||||  |||||| ||||||||||||||||||||  || || ||||    
T  53836040 cgtcaaactttccgattttaccagaaatcaagtttacctccaagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgaattgacac 53835941  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  53835940 gcgatttgtggaacat 53835925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 48379666 - 48379560
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||||||||||||| ||||| |||||| ||| || || |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||||||     
T  48379666 ttccgattttaccagaaatcgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgc 48379567  T
Q  298 ggaacat 304  Q
    |||||||    
T  48379566 ggaacat 48379560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 21386507 - 21386622
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || ||||||||||| ||||| |||||| |||  |||| ||||||||||  | |||||||| ||||||||||||||||||  ||||||||||    
T  21386507 cgtcaaacttttcgattttaccagaaatcgagtttacctctaagttaacacgattttgatacctaaaaatgtaaactcggtaaactcggagagttaacac 21386606  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  21386607 tcgatttggggaacat 21386622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 45602440 - 45602555
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||| ||||||||||| ||||  |||||| || ||||||||||| |||||| | || ||||||||||| ||||||||||||  ||||||||||    
T  45602440 cgtcaaacatttcgattttaccagaaattgagtttacctacgagttgacacaattttaatacccaaaaacgtaaattcggtaaactcggcgagttaacac 45602539  T
Q  289 tcgatttgtggaacat 304  Q
    |||||| ||| |||||    
T  45602540 tcgattcgtgaaacat 45602555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 7437603 - 7437709
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||||||||||||| ||| | |||||||||||| ||| |||||||||| || |||||| | |||||||| |||||||||  ||||||||||||||||||     
T  7437603 ttccgattttaccaaaaaccgagtttatctccgtgttaacacgattttggtacctaaacaagtaaactcagtaaactcggagagttaacactcgatttgc 7437702  T
Q  298 ggaacat 304  Q
    |||||||    
T  7437703 ggaacat 7437709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 25049947 - 25049870
Alignment:
Q  191 tcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    ||||||||||||||||||| | ||||| |||||| |||||||||||||||||||| || |||||||||||||||||||    
T  25049947 tcaaacattccgattttactagaaatcgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcgg 25049870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 52810879 - 52810768
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||  | |||||| ||| ||||| |||| ||||| || |||||||||||||||||||||| ||||  ||||||||||||||    
T  52810879 aaaccttccgattttaccagaacccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 52810780  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  52810779 tttgcggaacat 52810768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 17946749 - 17946638
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| ||| |||||| || |||||||||||||||||| ||| ||||  || |||||||||||    
T  17946749 aaaccttccgattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgataatctcggagaattaacactcga 17946650  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  17946649 tttgcggaacat 17946638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 21718460 - 21718551
Alignment:
Q  213 aaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||| |||||||||  |||||||||||||||| ||  || ||||||||||||| ||||| |||| ||||||||||||||||| ||||||||    
T  21718460 aaatcgagtttatctttgagttgacacgattttggtatcttaaaacgtaaactcagtaaaatcgacgagttaacactcgatttttggaacat 21718551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 26107850 - 26107739
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||| ||||| ||||| |||||| ||| ||||| ||| |||||| || |||||||||||||||||| ||| ||||  |||||| |||||||    
T  26107850 aaaccttccgattgtaccagaaatcgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgttaatctcggagagttatcactcga 26107751  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  26107750 tttgcggaacat 26107739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 37455368 - 37455257
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || ||||||||||||| |||||||| ||||  ||||||||||||||    
T  37455368 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 37455269  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  37455268 tttgcggaacat 37455257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 39038611 - 39038500
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| |||| ||||| || |||||||||||||| ||| ||| |||   ||||||||||||||    
T  39038611 aaaccttccgattttaccagaaaccgagtttacctcagagttaacaccatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcga 39038512  T
Q  293 tttgtggaacat 304  Q
    ||||||||||||    
T  39038511 tttgtggaacat 39038500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 50761779 - 50761882
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| |||| |||| ||||| | |||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||    
T  50761779 aaaccttccaatttcaccagaaatctattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 50761878  T
Q  293 tttg 296  Q
    ||||    
T  50761879 tttg 50761882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 52617651 - 52617762
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| ||| ||||| |||||||||| || |||||||||||||| ||| ||| |||   ||||||||||||||    
T  52617651 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcga 52617750  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  52617751 tttgcggaacat 52617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 43173003 - 43172890
Alignment:
Q  191 tcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactc 290  Q
    |||||| || ||||||||||| ||||| |||||| ||||||||  |||||||||| || |||||| || |||||||| ||||||  | ||||||||| ||    
T  43173003 tcaaacctttcgattttaccagaaatcgagtttacctccgagtcaacacgattttggtacctaaacacataaactcgataaacttaaagagttaacattc 43172904  T
Q  291 gatttgtggaacat 304  Q
    |||||| |||||||    
T  43172903 gatttgcggaacat 43172890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 20833418 - 20833310
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| |||   |||||| ||| ||||| |||||||||| || |||||||||||||||||| ||| |||   ||||||||||||||    
T  20833418 aaaccttccgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcagagagttaacactcga 20833319  T
Q  293 tttgtggaa 301  Q
    |||| ||||    
T  20833318 tttgcggaa 20833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 54629361 - 54629261
Alignment:
Q  204 ttttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaaca 303  Q
    ||||| || ||||| |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| |||   |||||||||||| ||||| ||||||    
T  54629361 ttttatcagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaatttgcggaaca 54629262  T
Q  304 t 304  Q
    |    
T  54629261 t 54629261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 23753068 - 23753171
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  23753068 aaaccttccaattttaccaaaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 23753167  T
Q  293 tttg 296  Q
    ||||    
T  23753168 tttg 23753171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 31645940 - 31646043
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || ||||||||||||| |||||||| ||||  ||||||||||||||    
T  31645940 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 31646039  T
Q  293 tttg 296  Q
    ||||    
T  31646040 tttg 31646043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 33693334 - 33693227
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||| |||||||||| ||||| |||||| |||| |||| |||||||||| ||   ||||| | |||||||||||||||||  |||||||||     
T  33693334 cgtcaaaccttctgattttaccagaaatcgagtttacctccaagttaacacgattttggtatgtaaaatcataaactcggtaaactcggagagttaacat 33693235  T
Q  289 tcgatttg 296  Q
    ||||||||    
T  33693234 tcgatttg 33693227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 51737366 - 51737477
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||| | ||| | |||||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| |||   ||||||||||||||    
T  51737366 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcagagagttaacactcga 51737465  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  51737466 tttgcggaacat 51737477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 44905543 - 44905645
Alignment:
Q  202 gattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaa 301  Q
    |||||||||| ||| | || ||| ||| || || |||||||||| || ||||| |||||||||||||||| ||||  |||||||||||||||||| ||||    
T  44905543 gattttaccagaaaccgagattacctcagaattaacacgatttttgtacctaagaacgtaaactcggtaatctcggagagttaacactcgatttgcggaa 44905642  T
Q  302 cat 304  Q
    |||    
T  44905643 cat 44905645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 9818587 - 9818701
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||||||||| |||| ||||| |||||| ||||||||| ||||| ||||    |||||||||||||||||||   | |  | | ||||||||    
T  9818587 cgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacac 9818686  T
Q  289 tcgatttgtggaaca 303  Q
    |||||||||||||||    
T  9818687 tcgatttgtggaaca 9818701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 18750159 - 18750053
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||| ||||||||| ||| | |||||| ||| ||||| ||| |||||| || ||||||||||||||||| ||||  ||   ||||||||||||||||||     
T  18750159 ttccaattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagtaatatcagagagttaacactcgatttgc 18750060  T
Q  298 ggaacat 304  Q
    |||||||    
T  18750059 ggaacat 18750053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 4962754 - 4962869
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || |||||||||   ||||| |||||| |||| |||| ||||||||||  | |||||||||||||||||| ||||||    |||||||| |    
T  4962754 cgtcaaacctttcgattttacttgaaatcgagtttacctccaagttaacacgattttgatacctaaaaacgtaaactcgataaacttagagagttaacgc 4962853  T
Q  289 tcgatttgtggaacat 304  Q
    || ||||| |||||||    
T  4962854 tcaatttgcggaacat 4962869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 40897624 - 40897541
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||| ||| ||||| |||||||||| || ||||||| |||||| ||||||| ||||  ||||||||||||||| || |||||||    
T  40897624 tttacctcagagttaacacgatttttgtacctaaaatcgtaaattcggtaatctcggagagttaacactcgatctgcggaacat 40897541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 50902988 - 50903087
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | |||||| ||| ||||| |||||||||| || | |||||||||||||||| ||  ||||  ||||||||||||||    
T  50902988 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcgatattctcggagagttaacactcga 50903087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 45863307 - 45863233
Alignment:
Q  230 gagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||| |||||||||| || |||||||||||||||||  ||| |||   |||||||||||||||||| |||||||    
T  45863307 gagttaacacgatttttgtacctaaaaacgtaaactctttaatctcagagagttaacactcgatttgcggaacat 45863233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 16155242 - 16155163
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||||| |||| |||||| || ||| | |||||| ||| ||||| |||||||||| || |||||||||||||| ||||    
T  16155242 cgtcaaaccttccaattttatcaaaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaattcgg 16155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 42736385 - 42736270
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||  |||||||||| |||  |||||||||||   ||| |||||||||| ||  ||||||||| ||||||| |||||||||  | |||||||    
T  42736385 cgtcaaactttttgattttaccagaaactaagtttatctcaatgttaacacgattttggtatctaaaaacgcaaactcgataaactcgacaaattaacac 42736286  T
Q  289 tcgatttgtggaacat 304  Q
    | |||||  |||||||    
T  42736285 ttgatttacggaacat 42736270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 49458436 - 49458358
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    |||||||| |||||||||||||| ||||| ||||||  || ||||| |||| |||||  | |||||| |||||||||||    
T  49458436 cgtcaaaccttccgattttaccagaaatcgagtttacttcagagttaacacaattttgatacctaaacacgtaaactcg 49458358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 40198732 - 40198776
Alignment:
Q  201 cgattttaccataaatcaagtttatctccgagttgacacgatttt 245  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||    
T  40198732 cgattttaccaaaaaacaagtttatctccgagtctacacgatttt 40198776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 52182425 - 52182311
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||| ||||||||||| ||||| | |||| |||||| |||||||||||| ||| |||||||||||||||||| ||||||||  ||||||||||    
T  52182425 cgtcaaacatttcgattttaccagaaatcgaatttacctccgaattgacacgatttcagtacctaaaaacgtaaactcgataaactcggcgagttaacac 52182326  T
Q  289 tcgatttgtggaaca 303  Q
    |||||||||| ||||    
T  52182325 tcgatttgtgaaaca 52182311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 49971624 - 49971733
Alignment:
Q  195 acattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatt 294  Q
    ||||| ||||||||||| ||| | |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||  | |||||||| ||||||    
T  49971624 acatttcgattttaccagaaaacgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcggtaaactcagtaagttaacattcgatt 49971723  T
Q  295 tgtggaacat 304  Q
    ||||||||||    
T  49971724 tgtggaacat 49971733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 4005166 - 4005051
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  4005166 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 4005067  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  4005066 gcgatttgtggaacat 4005051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 1243328 - 1243443
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||| ||||||||||  ||||| ||||    
T  1243328 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactaggtaaactcgccgagttgacac 1243427  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  1243428 gcgatttgtggaacat 1243443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 8147416 - 8147301
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || | ||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| |||||||||||||||||||| |||||| ||||    
T  8147416 cgtcaaactttgcaattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgctgagttgacac 8147317  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  8147316 gcgatttgtggaacat 8147301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 9192123 - 9192008
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||| |||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  9192123 cgtcaaactttctgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 9192024  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  9192023 gcgatttgtggaacat 9192008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 41353520 - 41353405
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| || |||||||||||||||||  ||||| ||||    
T  41353520 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacac 41353421  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  41353420 gcgatttgtggaacat 41353405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 51106991 - 51106876
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||  ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  51106991 cgtcaaactttccgattttaccagaaatcgagttttcctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 51106892  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  51106891 gcgatttgtggaacat 51106876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 27257880 - 27257986
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||||||||||||||  |||||||||||| ||| |||||||||||||||| || |||||||||||||| ||  ||||||||  ||||||||||    
T  27257880 cgtcaaacattccgattttaccgaaaatcaagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacac 27257979  T
Q  289 tcgattt 295  Q
    | |||||    
T  27257980 tagattt 27257986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 25830953 - 25831036
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  25830953 tttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgtggaacat 25831036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 26757714 - 26757599
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||| ||||| || || ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  26757714 cgtcaaactttccgattttaccagaaatcgagtttacctctgagttaactcgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 26757615  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  26757614 gcgatttgtggaacat 26757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 45273093 - 45272978
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||| | |||||| ||| ||||| |||| ||||| || |||||||||||||||||| ||| ||||  ||||||||||    
T  45273093 cgtcaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcgataatctcggagagttaacac 45272994  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  45272993 tcgatttgcggaacat 45272978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 48966513 - 48966628
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||| |||| | || |||||||||||| ||| ||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||| |    
T  48966513 cgtcaaaccttccaatttcatcagaaatcaagtttacctcagagttaacacgattttggtacctaaacacgtaaactcagtaaactcgaagagttaaccc 48966612  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  48966613 tcgatttgcggaacat 48966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 5494772 - 5494885
Alignment:
Q  191 tcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactc 290  Q
    |||||| ||| |||||||||| ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||    
T  5494772 tcaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactc 5494871  T
Q  291 gatttgtggaacat 304  Q
     ||||| |||||||    
T  5494872 aatttgcggaacat 5494885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 3583578 - 3583693
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||| | ||| | ||||||  ||  |||| |||||||||  || |||||||||||||||||||||||||||  ||||||||||    
T  3583578 cgtcaaactttccgattttactagaaaccgagtttacttctaagttaacacgatttcggtacctaaaaacgtaaactcggtaaactcggagagttaacac 3583677  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  3583678 tcgatttgcggaacat 3583693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 15834710 - 15834821
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||||| | |||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  15834710 aaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 15834809  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  15834810 tttgcggaacat 15834821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 46328508 - 46328397
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| ||||||||||| || ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  || |||||||||||    
T  46328508 aaaccttccgattttaacagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaattaacactcga 46328409  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  46328408 tttgcggaacat 46328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 8140919 - 8141020
Alignment:
Q  203 attttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaac 302  Q
    ||||||||| ||||| | |||| ||| ||||| |||||||||| || |||||||||||||||||| ||| ||||  |||||||||||||||||| |||||    
T  8140919 attttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcggaac 8141018  T
Q  303 at 304  Q
    ||    
T  8141019 at 8141020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 47371600 - 47371704
Alignment:
Q  192 caaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcg 291  Q
    ||||| |||||||||||||| ||||| |||||| ||||||||| |||||||||| || |||||  ||||||||||| |||||||   | |||||||||||    
T  47371600 caaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaagtacgtaaactcgataaactcagagtgttaacactcg 47371699  T
Q  292 atttg 296  Q
    |||||    
T  47371700 atttg 47371704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 28403968 - 28404083
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||| ||||||||  | ||| | | |||| || | |||| |||||||||| || |||||||| |||||||| ||||| |||| ||||||||||    
T  28403968 cgtcaaacatttcgattttattagaaaccgaatttaccttcaagttaacacgattttggtacctaaaaatgtaaactcagtaaattcgaagagttaacac 28404067  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  28404068 tcgatttgcggaacat 28404083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 11579122 - 11579200
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    |||||||| |||||||||||||| ||||||| |||| ||||||||| ||||| ||||||  |||||| |||||||||||    
T  11579122 cgtcaaactttccgattttaccagaaatcaaatttacctccgagttaacacgtttttagcacctaaacacgtaaactcg 11579200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 38535827 - 38535933
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||||||||||||| ||| | |||||| ||| ||||| |||| ||||| ||  ||||||||||||||||||||| || |  ||||||| ||||||||||     
T  38535827 ttccgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgc 38535926  T
Q  298 ggaacat 304  Q
    |||||||    
T  38535927 ggaacat 38535933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 38558045 - 38558151
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||||||||||||| ||| | |||||| ||| ||||| |||| ||||| ||  ||||||||||||||||||||| || |  ||||||| ||||||||||     
T  38558045 ttccgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgc 38558144  T
Q  298 ggaacat 304  Q
    |||||||    
T  38558145 ggaacat 38558151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 5209390 - 5209505
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||| ||||| |||| ||||| |||| | ||||||||| |||||||||| || |||||| |||||||  || |||||||   | ||||||||    
T  5209390 cgtcaaactttctgatttcaccagaaatcgagttgacctccgagttaacacgattttggtacctaaacacgtaaaaacgataaactcagagtgttaacac 5209489  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  5209490 tcgatttgcggaacat 5209505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 6313098 - 6312987
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || |||||||||||    
T  6313098 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 6312999  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  6312998 tttgcggaacat 6312987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 25612614 - 25612503
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || |||||||||||    
T  25612614 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 25612515  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  25612514 tttgcggaacat 25612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 29396110 - 29396221
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || |||||||||||    
T  29396110 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 29396209  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  29396210 tttgcggaacat 29396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 1108451 - 1108337
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||||||||| |||| ||| | |||||| ||||||||| ||||| |||||   ||||||||||||||||| |   | |  | ||||||||||    
T  1108451 cgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttaccacctaaaaacgtaaactcagacgaatttacgagttaacac 1108352  T
Q  289 tcgatttgtggaaca 303  Q
    |||||||||||||||    
T  1108351 tcgatttgtggaaca 1108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 9322181 - 9322295
Alignment:
Q  190 gtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacact 289  Q
    ||||||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || ||||||||    
T  9322181 gtcaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacact 9322280  T
Q  290 cgatttgtggaacat 304  Q
    ||||||  |||||||    
T  9322281 cgatttacggaacat 9322295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 49236988 - 49237103
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || ||||||||||| ||| | || ||| |||||| || ||||| |||| || |||||| || |||||||| ||||||||| |  |||||||    
T  49236988 cgtcaaacctttcgattttaccagaaaccgagcttaactccgaattaacacggttttggtacctaaacacataaactcgataaactcgaagtattaacac 49237087  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||  |||||||    
T  49237088 tcgatttacggaacat 49237103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 49453095 - 49453198
Alignment:
Q  202 gattttaccataaatcaagtttatctccgagttgacacgattttag-tgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtgga 300  Q
    |||||| ||| ||||| |||||| ||| ||||| |||||||||| | | |||||| || |||||| ||||||||||   ||||||||||||||||| |||    
T  49453095 gatttttccagaaatcgagtttacctcagagttaacacgatttttggtacctaaacacataaactaggtaaactcggacagttaacactcgatttgcgga 49453194  T
Q  301 acat 304  Q
    ||||    
T  49453195 acat 49453198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 19863093 - 19863040
Alignment:
Q  251 ctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||| |||||| ||||||||||||| ||||||||| || |||||||||||||    
T  19863093 ctaaaaccgtaaattcggtaaactcgaagagttaacattcaatttgtggaacat 19863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 51702107 - 51702006
Alignment:
Q  203 attttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaac 302  Q
    ||||||||| ||| | | |||| ||| ||||| |||| ||||| || |||||||| ||||||||| ||| ||||  || ||||||||||||||| |||||    
T  51702107 attttaccagaaaccgattttacctcagagttaacacaatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaac 51702008  T
Q  303 at 304  Q
    ||    
T  51702007 at 51702006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 7798599 - 7798520
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||||| ||||||||| |||| ||| | |||||| ||||||||| ||||| ||||    |||||||||||||||||||    
T  7798599 cgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgg 7798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 25253545 - 25253486
Alignment:
Q  236 acacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgattt 295  Q
    |||||||||| || ||||||||| ||||||||||||||||   || ||||||||||||||    
T  25253545 acacgattttggtacctaaaaacataaactcggtaaactcagagaattaacactcgattt 25253486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 32760132 - 32760198
Alignment:
Q  200 ccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    |||||||||| | ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||||    
T  32760132 ccgattttactagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactc 32760198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 18798974 - 18798897
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggta 270  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||||||    
T  18798974 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta 18798897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 28387152 - 28387204
Alignment:
Q  252 taaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||| ||||||||||||| ||||  |||||||||| ||||||| |||||||    
T  28387152 taaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacat 28387204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 35177232 - 35177340
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagtt-aaca 287  Q
    |||||| | ||||||||||| || ||||| |||||| ||| || || |||||||||| || ||||||||| |||| | | ||||||||  | ||| ||||    
T  35177232 cgtcaatccttccgattttatcagaaatcgagtttacctctgaattaacacgattttggtacctaaaaacataaatttgataaactcggagtgttaaaca 35177331  T
Q  288 ctcgatttg 296  Q
    |||||||||    
T  35177332 ctcgatttg 35177340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 1463693 - 1463808
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  1463693 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 1463792  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  1463793 gcgatttgtggaacat 1463808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 6788178 - 6788063
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  6788178 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 6788079  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  6788078 gcgatttgtggaacat 6788063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 16438784 - 16438669
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| || || |||||| |||| |||| |||||||||| || |||||||||||||||||| ||||||||  ||||||||||    
T  16438784 cgtcaaaccttccgattttaccagaagtcgagtttacctccaagttaacacgatttttgtacctaaaaacgtaaactcgataaactcggagagttaacac 16438685  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  16438684 tcgatttgcggaacat 16438669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 10113802 - 10113917
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||||| ||| | |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  10113802 cgtcaaactttccgattttaccaaaaaacgagtttacctccgagttaacacgtttttaggacctaaacacgtaaactcggtaaactcgccgagttgacac 10113901  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  10113902 gcgatttgtggaacat 10113917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 3000318 - 3000203
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| | |||||||||||||||||| | |||| | ||||||| |||||||||| || |||||| ||||||| || |||||||||  ||||||||||    
T  3000318 cgtcaaacttcccgattttaccataaatcgaatttacccccgagttaacacgattttggtacctaaacacgtaaaatcagtaaactcggcgagttaacac 3000219  T
Q  289 tcgatttgtggaacat 304  Q
    | ||||||||||||||    
T  3000218 ttgatttgtggaacat 3000203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 31975674 - 31975781
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||| | ||||| |||||| ||| ||||| |||||||||| || |||||| || ||||||| |||||||||  ||||||||||    
T  31975674 cgtcaaaccttccgattttacaagaaatcgagtttacctcagagttaacacgattttggtacctaaacacataaactcagtaaactcggagagttaacac 31975773  T
Q  289 tcgatttg 296  Q
    | ||||||    
T  31975774 ttgatttg 31975781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 7497620 - 7497509
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||| | ||| ||||  ||||||||| ||||    
T  7497620 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacattcga 7497521  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  7497520 tttgcggaacat 7497509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 14262115 - 14262226
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||||| | |||| ||| ||||| |||||||||| || |||||||| ||||||| | ||| ||||  ||||||||||||||    
T  14262115 aaaccttccaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaaagtaaactagataatctcggagagttaacactcga 14262214  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  14262215 tttgcggaacat 14262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 13461451 - 13461374
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    |||||||||||| |||||||||| ||| | |||||| ||||||||||||||||||||  | | |||||||||||||||    
T  13461451 cgtcaaacattctgattttaccaaaaaccgagtttacctccgagttgacacgattttgatacataaaaacgtaaactc 13461374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 31067954 - 31067843
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || |||||||||||    
T  31067954 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 31067855  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  31067854 tttgcggaacat 31067843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 30384780 - 30384846
Alignment:
Q  230 gagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttg 296  Q
    ||||| |||||||||| || ||||||||| |||||||||||| ||||  ||||||||||||||||||    
T  30384780 gagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcgatttg 30384846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 28900863 - 28900939
Alignment:
Q  192 caaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    ||||| |||||||||||||| ||||| |||||| ||| ||||| |||||||||| || |||||| | ||||||||||    
T  28900863 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaactcgg 28900939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 34758786 - 34758869
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||| ||| ||||| |||||||||| || |||||||||||||||| | ||| ||||  |||||||| ||||||||| |||||||    
T  34758786 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacat 34758869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 8779603 - 8779717
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||||||||| |||| ||| | |||||| ||||||||| ||||| ||||    |||||||||||||||||||   | |  | ||||||||||    
T  8779603 cgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcggacgagtttacgagttaacac 8779702  T
Q  289 tcgatttgtggaaca 303  Q
    |||||||||| ||||    
T  8779703 tcgatttgtgaaaca 8779717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 31996270 - 31996348
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    |||||||| ||||||||| |||| ||||| |||||| ||||||||| ||||| ||||    ||||||||||||||||||    
T  31996270 cgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 31996348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 4200130 - 4200241
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| ||| |||||| || | |||||| ||||||||| ||| ||||  || |||||||||||    
T  4200130 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacttaaaaatgtaaactcgataatctcggagatttaacactcga 4200229  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  4200230 tttgcggaacat 4200241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 31896159 - 31896048
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||| ||||| ||| ||||  || |||||||||||    
T  31896159 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtatactcgataatctcggagatttaacactcga 31896060  T
Q  293 tttgtggaacat 304  Q
    |||  |||||||    
T  31896059 tttacggaacat 31896048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 1452072 - 1452116
Alignment:
Q  260 taaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||||||||||||||  ||||| |||| |||||||||||||||    
T  1452072 taaactcggtaaactcgccgagttgacacgcgatttgtggaacat 1452116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 14741504 - 14741389
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||| | ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  14741504 cgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 14741405  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  14741404 gcgatttgtggaacat 14741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 26201812 - 26201927
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||||||||||||||| ||  |||  |||||| ||||||||| |||||||||| || |||||||| ||||| ||||||||||||   |||||||||    
T  26201812 cgtcaaacattccgattttagcaataattgagtttacctccgagtttacacgattttggtacctaaaaatgtaaattcggtaaactcggcaagttaacac 26201911  T
Q  289 tcgatttgtggaacat 304  Q
    ||||||||||||||||    
T  26201912 tcgatttgtggaacat 26201927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 4639896 - 4640011
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||  |||||||||||||| ||||  |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  4639896 cgtcaaaatttccgattttaccagaaatagagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 4639995  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  4639996 gcgatttgtggaacat 4640011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 12740895 - 12740788
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||| ||||||||| | | | |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||    
T  12740895 cgtcaaaccttccaattttaccagacaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacac 12740796  T
Q  289 tcgatttg 296  Q
    ||||||||    
T  12740795 tcgatttg 12740788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 37328428 - 37328317
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||||| |||||| ||  ||||| |||||||||| || |||||||||||||||||| ||| ||||  |||| |||||||||    
T  37328428 aaaccttccgattttaccagaaatcgagtttaccttagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagtcaacactcga 37328329  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  37328328 tttgcggaacat 37328317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 37972561 - 37972672
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| |||   |||||||||| ||||| |||||||||| || |||||||||||||||||||||| |||    |||||||||||||    
T  37972561 aaaccttccgattttaccagaaactgagtttatctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcagaaagttaacactcga 37972660  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  37972661 tttgcggaacat 37972672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 43172220 - 43172117
Alignment:
Q  201 cgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtgga 300  Q
    ||||||||||| ||||| |||||| ||||||||| ||| ||||||  | |||||||| |||||||||||||||||   |||||||||||||||||| |||    
T  43172220 cgattttaccagaaatcgagtttacctccgagttaacatgattttgatacctaaaaatgtaaactcggtaaactcagagagttaacactcgatttgcgga 43172121  T
Q  301 acat 304  Q
    ||||    
T  43172120 acat 43172117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 44256439 - 44256542
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||||| |||||| ||| ||||| |||||||||| ||  ||||||||||||||||| ||| ||||  ||||||||||||||    
T  44256439 aaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtatctaaaaacgtaaactcgataatctcggagagttaacactcga 44256538  T
Q  293 tttg 296  Q
    ||||    
T  44256539 tttg 44256542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 304
Target Start/End: Complemental strand, 32884295 - 32884181
Alignment:
Q  190 gtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacact 289  Q
    ||||||| |||||||||||||| |||   |||||| ||| ||||| || ||||||| || |||||||||||||||||||||| ||||  |||||||||||    
T  32884295 gtcaaaccttccgattttaccagaaacagagtttacctcagagttaactcgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacact 32884196  T
Q  290 cgatttgtggaacat 304  Q
    ||||||  |||||||    
T  32884195 cgatttacggaacat 32884181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 33383169 - 33383084
Alignment:
Q  219 agtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||||||| |||||  ||||||||| || |||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  33383169 agtttatctcagagttaccacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacat 33383084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 40460398 - 40460507
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || ||||||| |||||||||||||| ||||| ||||||||||||||    
T  40460398 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaagcgtaaactcggtaatctcgaagagttaacactcga 40460497  T
Q  293 tttgtggaac 302  Q
    |||| |||||    
T  40460498 tttgcggaac 40460507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 18838931 - 18838820
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  18838931 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 18838832  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  18838831 tttgcggaacat 18838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 27148923 - 27148808
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||||||| ||||||| |  ||||  || ||| |||||| || ||||||||||  | |||||||||||||||||| ||||||    ||||||||||    
T  27148923 cgtcaaacattctgattttagctgaaattgaggttacctccgatttaacacgattttgatacctaaaaacgtaaactcgataaactttgcgagttaacac 27148824  T
Q  289 tcgatttgtggaacat 304  Q
    ||||||||||||||||    
T  27148823 tcgatttgtggaacat 27148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 33891918 - 33892029
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||  ||||| |||||||||| || |||||||||||||||| ||||| ||||  ||||||||||||||    
T  33891918 aaaccttccaattttaccagaaaccgattttaccttagagttaacacgatttttgtacctaaaaacgtaaacttggtaatctcggagagttaacactcga 33892017  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  33892018 tttgcggaacat 33892029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 39028580 - 39028497
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||| ||| ||||| |||| ||||| || |||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  39028580 tttacctcagagtttacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacat 39028497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 42610695 - 42610580
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||| |||||||||| ||| |||||||| |||  | || |||||||||| || |||||| ||||||| |||||||||||   ||||||||||    
T  42610695 cgtcaaaccttctgattttaccagaaaccaagtttacctcaaatttaacacgattttggtacctaaacacgtaaattcggtaaactcagagagttaacac 42610596  T
Q  289 tcgatttgtggaacat 304  Q
    || ||||| |||||||    
T  42610595 tcaatttgcggaacat 42610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11735215 - 11735289
Alignment:
Q  192 caaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    |||||||||||||||||||| ||||| |||||| ||||||||| |||||||||| |  ||||||| |||||||||    
T  11735215 caaacattccgattttaccagaaatcgagtttacctccgagttaacacgattttgggacctaaaatcgtaaactc 11735289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 29893467 - 29893382
Alignment:
Q  219 agtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||| ||| ||||| |||||||||| || | |||||| ||||||||||||| ||||  |||||||||||||||||| |||||||    
T  29893467 agtttacctcagagttaacacgatttttgtacttaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacat 29893382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 8675841 - 8675749
Alignment:
Q  204 ttttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttg 296  Q
    |||||||| ||| | |||||| ||  ||||| |||||||||| || ||||||||||| |||||||||| ||||  ||||||||||||||||||    
T  8675841 ttttaccagaaaccgagtttaccttagagttaacacgattttggtacctaaaaacgttaactcggtaatctcggagagttaacactcgatttg 8675749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 510167 - 510056
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || |||||||||||    
T  510167 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 510068  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  510067 tttgcggaacat 510056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 7993678 - 7993567
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||| ||| | |||||| |||  |||| |||||||||| || | ||||||  || ||||||||| ||||  ||||||||||||||    
T  7993678 aaaccttccgattttaccagaaaccgagtttacctcatagttaacacgatttttgtacttaaaaatatatactcggtaatctcggagagttaacactcga 7993579  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  7993578 tttgcggaacat 7993567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 28034532 - 28034643
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | ||||  || ||||| |||||||||| || | |||||||||||||||||||| |||   ||||||||||||||    
T  28034532 aaaccttccaattttaccagaaaccgattttacatcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcagagagttaacactcga 28034631  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  28034632 tttgcggaacat 28034643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 28342832 - 28342721
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || |||||||||||    
T  28342832 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 28342733  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  28342732 tttgcggaacat 28342721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 29586035 - 29585924
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||||  ||| | | |||| ||| ||||| |||||||||| || |||||||||||||||||||||| |||   |||||||||||| |    
T  29586035 aaaccttccgattttacccgaaaccgactttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 29585936  T
Q  293 tttgtggaacat 304  Q
    | || |||||||    
T  29585935 tctgcggaacat 29585924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 39784628 - 39784517
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||| || |||||||||||    
T  39784628 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcga 39784529  T
Q  293 tttgtggaacat 304  Q
    |||  |||||||    
T  39784528 tttacggaacat 39784517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 44121622 - 44121725
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    |||||||||||||| ||| | | |||| |||  |||| |||||||||| || |||||||||||||| ||||||| |||   ||||||||||||||||||     
T  44121622 ttccgattttaccagaaaccgaatttacctcatagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcagagagttaacactcgatttgc 44121721  T
Q  298 ggaa 301  Q
    ||||    
T  44121722 ggaa 44121725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 33497115 - 33497193
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    ||||||||||||| |||||| || ||||| |||||| ||||||||||||||||||||  | | |||||| |||||||||    
T  33497115 cgtcaaacattccaattttatcagaaatcgagtttacctccgagttgacacgattttgatacttaaaaatgtaaactcg 33497193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 29614489 - 29614590
Alignment:
Q  203 attttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaac 302  Q
    ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || ||||||||||||||| |||||    
T  29614489 attttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaac 29614588  T
Q  303 at 304  Q
    ||    
T  29614589 at 29614590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 16709483 - 16709398
Alignment:
Q  219 agtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatga-gttaacactcgatttgtggaacat 304  Q
    |||||| ||| |||||  ||||||||| || |||||||||||||||||||||||||| || | ||||||||| |||||| |||||||    
T  16709483 agtttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactc-ataatgttaacacttgatttgcggaacat 16709398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 17683719 - 17683634
Alignment:
Q  219 agtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatga-gttaacactcgatttgtggaacat 304  Q
    |||||| ||| |||||  ||||||||| || |||||||||||||||||||||||||| || | ||||||||| |||||| |||||||    
T  17683719 agtttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactc-ataatgttaacacttgatttgcggaacat 17683634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 23101775 - 23101701
Alignment:
Q  230 gagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || ||||||||||||||| |||||||    
T  23101775 gagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacat 23101701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 304
Target Start/End: Complemental strand, 41827840 - 41827738
Alignment:
Q  202 gattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaa 301  Q
    |||||||||| |||   |||||| ||| ||||| |||||||||| || |||||||||||||||||  ||| |||   |||||||||||| ||||| ||||    
T  41827840 gattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcaataatctcagagagttaacactcaatttgcggaa 41827741  T
Q  302 cat 304  Q
    |||    
T  41827740 cat 41827738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 48136908 - 48136990
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaa 271  Q
    |||||||| |||  ||||||||| |||   |||||| ||| ||||| |||||||||| || ||||||||||||||||||||||    
T  48136908 cgtcaaaccttctaattttaccagaaactgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaa 48136990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 37392648 - 37392725
Alignment:
Q  191 tcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    |||||| ||| ||||| |||| |||||||||||||||||||||| ||| | ||||    |||||||||||||||||||    
T  37392648 tcaaactttctgatttcaccaaaaatcaagtttatctccgagtttacatgtttttgccacctaaaaacgtaaactcgg 37392725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 14732317 - 14732393
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaact 265  Q
    |||||||| ||||||||| |||| ||| |||||||| ||||||||| ||||| ||||    ||||||||||||||||    
T  14732317 cgtcaaactttccgatttcaccaaaaaccaagtttacctccgagttaacacgtttttgccacctaaaaacgtaaact 14732393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 37915930 - 37915996
Alignment:
Q  201 cgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    ||||||||||||||||| |||||| ||| ||||| | ||| ||||||  |||||| |||||||||||    
T  37915930 cgattttaccataaatcgagtttacctctgagttaaaacgcttttagcacctaaacacgtaaactcg 37915996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 3023417 - 3023352
Alignment:
Q  231 agttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttg 296  Q
    |||| ||| |||||| || ||||||||| |||||||| ||| ||||  ||||||||||||||||||    
T  3023417 agttaacatgatttttgtacctaaaaacataaactcgataatctcggagagttaacactcgatttg 3023352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 18899951 - 18900066
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||||||||||| | ||||| |||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||  ||||| ||||    
T  18899951 cgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacac 18900050  T
Q  289 tcgatttgtggaacat 304  Q
     |||||||||||||||    
T  18900051 gcgatttgtggaacat 18900066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 10657953 - 10657842
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||||| | |||| ||| ||||| |||||||||| || |||||||||||||||||||||| |||   ||||||||||||||    
T  10657953 aaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcga 10657854  T
Q  293 tttgtggaacat 304  Q
    |||  |||||||    
T  10657853 tttacggaacat 10657842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 15224308 - 15224193
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || |||||| |||| ||||| |||||| ||| ||||| |||||||||| || |||||| ||||||| | ||||||||||  | ||||||||    
T  15224308 cgtcaaacttttcgatttcaccagaaatcgagtttacctctgagttaacacgattttggtacctaaacacgtaaaattggtaaactcggagtgttaacac 15224209  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||| |||||||    
T  15224208 tcgatttgcggaacat 15224193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 28739973 - 28740084
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || ||||||||| |||||||||||| ||||  ||||||||||||||    
T  28739973 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcga 28740072  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  28740073 tttgcggaacat 28740084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 379448 - 379342
Alignment:
Q  198 ttccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgt 297  Q
    ||||||||||| || ||| | | |||| ||| ||||| |||||||||| || |||||||||||||| ||||||| ||| | ||||||||||||||||||     
T  379448 ttccgattttatcaaaaaccgaatttacctcagagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcaaagagttaacactcgatttgc 379349  T
Q  298 ggaacat 304  Q
    |||||||    
T  379348 ggaacat 379342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 15926456 - 15926378
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    ||||||||||| ||||||||||| ||||| |||| | |||||||||||||||||||| || || |||||||||||||||    
T  15926456 cgtcaaacattgcgattttaccagaaatcgagttaacctccgagttgacacgattttggtaccaaaaaacgtaaactcg 15926378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 25288693 - 25288575
Alignment:
Q  186 acccgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaa 285  Q
    |||||| |||| |||||||||||| | ||| | |||||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  |||||||    
T  25288693 acccgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaa 25288594  T
Q  286 cactcgatttgtggaacat 304  Q
     | |||||||| |||||||    
T  25288593 tattcgatttgcggaacat 25288575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 31847241 - 31847357
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaa-ctcggtaaactcgatgagttaaca 287  Q
    |||||||| ||| ||||||| || ||||  |||||| |||||||||  || ||||||| | |||||||||||||| |||| ||||||||  |||||||||    
T  31847241 cgtcaaaccttctgattttatcagaaatagagtttacctccgagttaccatgattttaatacctaaaaacgtaaaactcgataaactcggagagttaaca 31847340  T
Q  288 ctcgatttgtggaacat 304  Q
    ||||||||| |||||||    
T  31847341 ctcgatttgaggaacat 31847357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 3858445 - 3858556
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    ||||||||||||||||||||||| ||||| |||||| || | ||||||||| |||||    | |||||||||||| ||||| ||||||  ||||||||||    
T  3858445 cgtcaaacattccgattttaccaaaaatcgagtttaccttcaagttgacacaattttgacacttaaaaacgtaaattcggttaactcggcgagttaacac 3858544  T
Q  289 tcgatttgtgga 300  Q
    || |||| ||||    
T  3858545 tcaatttatgga 3858556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 13833107 - 13833209
Alignment:
Q  202 gattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaa 301  Q
    |||||||| | ||||  |||||| ||| ||||| |||||||||| || |||||||||||||||||| ||| ||||| ||||||||| || ||||| ||||    
T  13833107 gattttactagaaattgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcgaagagttaacattcaatttgcggaa 13833206  T
Q  302 cat 304  Q
    |||    
T  13833207 cat 13833209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 6224256 - 6224367
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||||||||||| | ||| | |||| | ||  ||||| |||||||||  || |||||||||||||||||| ||| ||||  ||||||||||||||    
T  6224256 aaaccttccgattttactagaaaccgagttcacctaagagttaacacgatttgtgtacctaaaaacgtaaactcgataatctcggagagttaacactcga 6224355  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  6224356 tttgcggaacat 6224367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 18177794 - 18177683
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||| || |||||||||||    
T  18177794 aaactttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcga 18177695  T
Q  293 tttgtggaacat 304  Q
    |||  |||||||    
T  18177694 tttacggaacat 18177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 34342255 - 34342201
Alignment:
Q  250 cctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| |||||||    
T  34342255 cctaaaaacgtaaactcggtaaactcagagagttaacactcgatttgcggaacat 34342201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 43305060 - 43305110
Alignment:
Q  254 aaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  43305060 aaaacgaaaactcggtaaactcgacgaattaacactcgatttgtggaacat 43305110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 7027416 - 7027315
Alignment:
Q  203 attttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaac 302  Q
    ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| ||||||||| ||| ||||  || ||||||||||||||| |||||    
T  7027416 attttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaac 7027317  T
Q  303 at 304  Q
    ||    
T  7027316 at 7027315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 13898554 - 13898477
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    |||||||| ||||||||| |||| ||||| |||||| ||||||||| ||||| ||||   ||||||||||||||||||    
T  13898554 cgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactc 13898477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 14039171 - 14039094
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    |||||||| ||||||||| |||| ||||| |||||| ||||||||| ||||| ||||   ||||||||||||||||||    
T  14039171 cgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactc 14039094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 28845080 - 28845005
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttg 296  Q
    |||| ||| ||||| |||||||||| || ||||||||| |||||||| ||| ||||  ||||||||||||||||||    
T  28845080 tttacctcagagttaacacgatttttgtacctaaaaacataaactcgataatctcggagagttaacactcgatttg 28845005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 214973 - 215047
Alignment:
Q  230 gagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||| |||||||||| || |||||||||||||| ||||||| ||||   ||||||||||| ||||| |||||||    
T  214973 gagttaacacgattttggtacctaaaaacgtaaattcggtaatctcggaaagttaacactcaatttgcggaacat 215047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 2308750 - 2308852
Alignment:
Q  202 gattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaa 301  Q
    |||||||||| ||| | | |||| ||||||||| |||||||||| || | |||||||||||| |   ||||||||  ||||||||||||||||| || ||    
T  2308750 gattttaccacaaaccgaatttacctccgagttaacacgattttggtacataaaaacgtaaatttaataaactcggcgagttaacactcgatttatgaaa 2308849  T
Q  302 cat 304  Q
    |||    
T  2308850 cat 2308852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 38413477 - 38413591
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| ||||||||| |||| ||| | |||||| ||||||||| ||||| ||||    |||||||||||||||||||   | |  | ||||||||||    
T  38413477 cgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaaaacgtaaactcggacgagtttacgagttaacac 38413576  T
Q  289 tcgatttgtggaaca 303  Q
    ||||||| |||||||    
T  38413577 tcgatttatggaaca 38413591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 40829714 - 40829628
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactc 275  Q
    |||||||| || | ||||||||| ||| | |||||| ||||||||| ||||||||||  | |||||||| ||| |||||||||||||    
T  40829714 cgtcaaacctttctattttaccagaaaccgagtttacctccgagttaacacgattttgatacctaaaaatgtagactcggtaaactc 40829628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 304
Target Start/End: Original strand, 11153376 - 11153488
Alignment:
Q  192 caaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcg 291  Q
    |||||||  ||||||||||| ||| | |||||| ||||||||| ||||||||| ||  |||||||||||||| |||    | |  | ||||||||||||     
T  11153376 caaacatctcgattttaccagaaaccgagtttacctccgagttaacacgatttcagcacctaaaaacgtaaattcgtccgagtttacgagttaacactca 11153475  T
Q  292 atttgtggaacat 304  Q
    |||||||||||||    
T  11153476 atttgtggaacat 11153488  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 3464115 - 3464052
Alignment:
Q  241 attttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||| || |||||||| ||||||||||||| ||||  |||||||||| ||||||| |||||||    
T  3464115 atttttgtacctaaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacat 3464052  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 26789308 - 26789205
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||| | | |||| ||| ||||| |||||||||| || |||||||| || |||||| ||| ||||  || |||||||||||    
T  26789308 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcga 26789209  T
Q  293 tttg 296  Q
    ||||    
T  26789208 tttg 26789205  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 1833733 - 1833807
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    ||||||||  ||||||||| ||||| | |||| |||| | |||||||||||||  | ||||||||||||||||||    
T  1833733 aaacattcttattttaccagaaatcgaatttacctccaaattgacacgattttgttacctaaaaacgtaaactcg 1833807  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 35404342 - 35404420
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcg 267  Q
    |||||||| |||| ||||||||| ||| | |||||| |||  |||| |||||||||  || ||||||||||||||||||    
T  35404342 cgtcaaactttccaattttaccaaaaaccgagtttacctctaagttaacacgatttcggtacctaaaaacgtaaactcg 35404420  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 32242233 - 32242306
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    |||||||| |||||||| | |||||||||||| ||| ||||| |||||||||| ||  || |||| ||||||||    
T  32242233 aaacattctgattttacaagaaatcaagtttacctcagagttaacacgattttggtatctcaaaatgtaaactc 32242306  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 32293990 - 32293914
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactc 266  Q
    ||||||||||||||||||||| | ||||| ||||||  || || || |||||||||| || || ||||||||||||||    
T  32293990 cgtcaaacattccgattttacaagaaatccagtttacatcagatttaacacgattttggtacc-aaaaacgtaaactc 32293914  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 1833799 - 1833835
Alignment:
Q  268 gtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  1833799 gtaaactcgacgagttaacactcggtttgtggaacat 1833835  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 24025926 - 24025870
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgatttt 245  Q
    |||||||||||| |||||||||| ||| | ||||||||||| |||| ||||| ||||    
T  24025926 cgtcaaacattctgattttaccaaaaaccgagtttatctccaagttaacacgttttt 24025870  T

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Target: scaffold1128 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 929 - 1042
Alignment:
Q  191 tcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactc 290  Q
    |||||| |||||||||||||| ||| | |||||| ||||||||| |||||||||| || |||||| |||||||||||||||||||   | ||||||||||    
T  929 tcaaactttccgattttaccagaaaccgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcggtaaactcagagtgttaacactc 1028  T
Q  291 gatttgtggaacat 304  Q
    |||||| |||||||    
T  1029 gatttgcggaacat 1042  T

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Target: scaffold1504 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 1361 - 1278
Alignment:
Q  221 tttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    |||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  1361 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgtggaacat 1278  T

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Target: scaffold0543 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 11047 - 10936
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| |||| ||||||||| ||||| | |||| ||| ||||| |||||||||| || |||||||| ||||||||||||| ||||  ||||||||||||||    
T  11047 aaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 10948  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  10947 tttgcggaacat 10936  T

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Target: scaffold0042 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 57743 - 57854
Alignment:
Q  193 aaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacactcga 292  Q
    |||| ||| |||||||| | ||| | |||||| ||| ||||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||||||    
T  57743 aaaccttctgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 57842  T
Q  293 tttgtggaacat 304  Q
    |||| |||||||    
T  57843 tttgcggaacat 57854  T

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Target: scaffold0110 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 39310 - 39417
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| || ||||||||||| ||| | |||| | ||| | ||| |||||||||| || |||||||||||||||||||||| ||||  ||||||||||    
T  39310 cgtcaaacctttcgattttaccagaaaccgagttgacctcagggttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacac 39409  T
Q  289 tcgatttg 296  Q
    ||||||||    
T  39410 tcgatttg 39417  T

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Target: scaffold0013 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 89358 - 89243
Alignment:
Q  189 cgtcaaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcggtaaactcgatgagttaacac 288  Q
    |||||||| |||| ||||||||| ||||| |||||| || | |||| ||||||| || || ||||||||| |||||||| |||||||   ||||||||||    
T  89358 cgtcaaaccttccaattttaccagaaatcgagtttaccttcaagttaacacgatattggtacctaaaaacttaaactcgataaactcacagagttaacac 89259  T
Q  289 tcgatttgtggaacat 304  Q
    |||||||  |||||||    
T  89258 tcgatttacggaacat 89243  T

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Target: scaffold0573 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 8931 - 8855
Alignment:
Q  192 caaacattccgattttaccataaatcaagtttatctccgagttgacacgattttagtgcctaaaaacgtaaactcgg 268  Q
    ||||| |||||||||||||| ||||| |||||| ||| ||||| |||||||||| || |||||| | ||||||||||    
T  8931 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaactcgg 8855  T

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Target: scaffold0263 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 490 - 537
Alignment:
Q  257 acgtaaactcggtaaactcgatgagttaacactcgatttgtggaacat 304  Q
    ||||||||||||||||||||  ||||| |||| |||||||||||||||    
T  490 acgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacat 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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