View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18453_low_44 (Length: 357)
Name: NF18453_low_44
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18453_low_44 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 3 - 357
Target Start/End: Original strand, 6357982 - 6358334
Alignment:
| Q |
3 |
caggaaaagcaataggaaatgaatattagtttcgatgtcaccaacacataacggaaggtagaagaaattgttggaacatgtatattgcaattccaacaga |
102 |
Q |
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| T |
6357982 |
caggcaaagcaataggaaatgaatattagtttcgatgtcaccaacacataacggaaggtagaagaaattgttggaacatgtatattgcaattccaacaga |
6358081 |
T |
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| Q |
103 |
aatcttaacacctcgacgttgcagaacatatttagttggaagatagttaatattaccacacaccagccaaataaaaaattaagctgctgatgtatgtaca |
202 |
Q |
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| T |
6358082 |
aatcttaacacctcgacgttgcagaacatatttagttggaagatagttaatattaccacacaccagccaaataaaaaattaagctgctgatgtatgcaca |
6358181 |
T |
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| Q |
203 |
tatgactaatattgtacacttaaatattacaatggcaagacataaatatttttactgaagaaactgaacttggccacctaaatagacattaaggagaatc |
302 |
Q |
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| T |
6358182 |
tatgactaatattgtacacttaaatattacaatggcaagacataaatatttttactgaagaagctgaacttgcccacctaa--agacattgaggagaatc |
6358279 |
T |
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| Q |
303 |
gaacttgagacattgaggagcgacagaaatcaatactaaagagattgcagatttt |
357 |
Q |
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| T |
6358280 |
gaacttgagacattgaggagcaacagaaatcaatattaaagagattgcagatttt |
6358334 |
T |
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