View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18453_low_46 (Length: 326)
Name: NF18453_low_46
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18453_low_46 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 14 - 288
Target Start/End: Complemental strand, 8499215 - 8498941
Alignment:
| Q |
14 |
agaaacacacagttaatttaccaaagacaagtgtaaattaaatgattgccaaactatggacgtgtggttgtaggatgtatgtagtatttagatttgtgac |
113 |
Q |
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| T |
8499215 |
agaaacacacagttaatttaccaaagacaagtgtaaattaaatgattgccaaactatggacgtgtggttgtaggatgtatgtagtatttagatttgtgac |
8499116 |
T |
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| Q |
114 |
attttccaacctgacgcaccatcttacgcaacaatttgggatagtnnnnnnntaataataaatatcgtggaattttctaaaaatccaaatttcattttcc |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8499115 |
attttccaacctgacgcaccatcttacgcaacaatttgggatagtaaaaaaataataataaatatcgtggaattttctaaaaatccaaatttcattttcc |
8499016 |
T |
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| Q |
214 |
atctggtccacgttccttcaattccaaactctttttataccctaatccattgcactattgaaagacttcatctac |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8499015 |
atctggtccacgttccttcaattccaaactctttttataccctaatccattgcactattgaaagacttcatctac |
8498941 |
T |
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