View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18453_low_51 (Length: 289)
Name: NF18453_low_51
Description: NF18453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18453_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 35042469 - 35042744
Alignment:
| Q |
1 |
tacttccttcacaaggtcttgggcaacctcttcggcatctagcagctgatttctagaaaattcaaatgctctttctgcatgaaggcgaaaagaaacacag |
100 |
Q |
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| T |
35042469 |
tacttccttcataaggtcttgggcaacctcttcggcatctagcagctgatttctagaaaattcaaatgctctttctgcatgaaggcgaaaagaaacacag |
35042568 |
T |
|
| Q |
101 |
ttcaaacatgtgcaaagccctctgcatcctcttgggttttttctcaaaattccttttcgggaactaacggcaagggcatcatgttgatctgtgactttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
35042569 |
ttcaaacatgtgcaaagccctctgcatcctcttgggttttttctcaaaattccttttcgggaactaacggcaagggcatcatgttgatctctgactttca |
35042668 |
T |
|
| Q |
201 |
ttttggacaagctccgacaacatccaggtgtttcaggtgatttctctccgttggacaaggcaggtgaacctacttc |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35042669 |
ttttggacaagctccgacaacatccaggtgtttcaggtgatttctctccgttggacaaggcaggtgaacctacttc |
35042744 |
T |
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