View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18454_high_8 (Length: 321)
Name: NF18454_high_8
Description: NF18454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18454_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 11 - 303
Target Start/End: Complemental strand, 42445004 - 42444712
Alignment:
| Q |
11 |
catcatcatcaattggtgcttcagctttctctccttttactgctgcattgttgaaggatcttgctccaattaatttgttgttacaaactgtaccattaag |
110 |
Q |
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| T |
42445004 |
catcctcatcaattggtgcttcagctttctctccttttactgctgcattgttgaaggatcttgctccaattaatttgttgttacaaactgtaccattaag |
42444905 |
T |
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| Q |
111 |
ttcgcatctccctttccatttcgacggtggtggtggtattcctgcgtcactaaacgaaggatgatcatcaggtgtgattcctgaatctagaacaccaata |
210 |
Q |
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| T |
42444904 |
tttgcatctccctttccatttcgacggtggtggtggtattcctgcgtcactaaacgaaggatgatcatcaggtgtgattcctgaatctagaacaccaata |
42444805 |
T |
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| Q |
211 |
ataattccctttccaaaatttgattccttccaaaatccgatattttgctgcaaccccaagaaatctggggtatgtgtggtttgacgacgtagt |
303 |
Q |
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| T |
42444804 |
ataattccctttccaaaatttgattccttccaagatccgatattttgctgcaaccccaagaaatctggggtatgtgtggtttgacgacgtagt |
42444712 |
T |
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