View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18455_high_4 (Length: 304)

Name: NF18455_high_4
Description: NF18455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18455_high_4
NF18455_high_4
[»] chr1 (23 HSPs)
chr1 (18-296)||(6487647-6487925)
chr1 (128-213)||(526996-527081)
chr1 (128-211)||(26040972-26041055)
chr1 (128-213)||(39858347-39858432)
chr1 (128-213)||(46845753-46845838)
chr1 (155-216)||(1673366-1673427)
chr1 (142-215)||(1994951-1995024)
chr1 (155-215)||(27325752-27325812)
chr1 (130-214)||(44797565-44797649)
chr1 (132-209)||(29637311-29637388)
chr1 (140-213)||(49430573-49430646)
chr1 (155-213)||(2403049-2403107)
chr1 (128-210)||(15225088-15225170)
chr1 (132-214)||(32267566-32267648)
chr1 (128-182)||(40314123-40314177)
chr1 (132-213)||(40294832-40294913)
chr1 (128-212)||(13276561-13276645)
chr1 (133-211)||(7178213-7178291)
chr1 (157-187)||(34311347-34311377)
chr1 (134-179)||(19989273-19989318)
chr1 (131-187)||(29731214-29731270)
chr1 (161-213)||(40030838-40030890)
chr1 (131-187)||(48489475-48489531)
[»] chr4 (21 HSPs)
chr4 (128-215)||(5817477-5817564)
chr4 (128-210)||(51579323-51579405)
chr4 (128-215)||(20107108-20107196)
chr4 (130-213)||(37605790-37605873)
chr4 (130-213)||(55281208-55281291)
chr4 (141-215)||(17044001-17044075)
chr4 (128-213)||(25784005-25784090)
chr4 (141-212)||(25164581-25164652)
chr4 (142-213)||(32525133-32525204)
chr4 (128-214)||(24059230-24059316)
chr4 (131-213)||(43749092-43749174)
chr4 (155-213)||(45996018-45996076)
chr4 (128-213)||(42179234-42179319)
chr4 (128-213)||(50498210-50498295)
chr4 (143-211)||(48525328-48525396)
chr4 (167-218)||(39631274-39631325)
chr4 (130-216)||(22364560-22364646)
chr4 (140-214)||(51579580-51579653)
chr4 (148-212)||(32290215-32290279)
chr4 (128-208)||(41277220-41277300)
chr4 (140-209)||(36851231-36851300)
[»] chr8 (18 HSPs)
chr8 (129-205)||(8368469-8368545)
chr8 (128-216)||(45413635-45413723)
chr8 (128-217)||(28897991-28898080)
chr8 (130-212)||(43066003-43066085)
chr8 (128-213)||(2599531-2599616)
chr8 (128-208)||(41075694-41075774)
chr8 (134-212)||(27497174-27497251)
chr8 (141-214)||(1993750-1993823)
chr8 (128-213)||(10391402-10391487)
chr8 (131-211)||(11904855-11904935)
chr8 (128-208)||(31774729-31774809)
chr8 (155-213)||(14342313-14342371)
chr8 (133-185)||(16465714-16465766)
chr8 (81-119)||(5749069-5749107)
chr8 (133-187)||(45502688-45502742)
chr8 (156-213)||(4077086-4077143)
chr8 (147-211)||(12142083-12142147)
chr8 (136-212)||(44081068-44081144)
[»] chr3 (14 HSPs)
chr3 (128-212)||(23004757-23004841)
chr3 (129-213)||(8330690-8330774)
chr3 (130-213)||(50989203-50989286)
chr3 (130-213)||(51092335-51092418)
chr3 (132-209)||(33288136-33288213)
chr3 (141-210)||(38247801-38247870)
chr3 (131-218)||(9271105-9271192)
chr3 (130-212)||(12224102-12224184)
chr3 (140-205)||(54713532-54713597)
chr3 (162-213)||(29915090-29915141)
chr3 (162-213)||(29964243-29964294)
chr3 (130-216)||(48034908-48034994)
chr3 (142-214)||(8496705-8496777)
chr3 (159-215)||(44092518-44092574)
[»] chr6 (8 HSPs)
chr6 (130-207)||(29429590-29429667)
chr6 (141-216)||(14314096-14314171)
chr6 (128-213)||(23915972-23916057)
chr6 (130-210)||(1244655-1244735)
chr6 (155-213)||(9045833-9045891)
chr6 (161-213)||(34792781-34792833)
chr6 (157-215)||(9521943-9522001)
chr6 (134-207)||(12748217-12748290)
[»] chr2 (15 HSPs)
chr2 (140-213)||(4434699-4434772)
chr2 (131-213)||(32599348-32599430)
chr2 (128-213)||(3121610-3121695)
chr2 (141-212)||(13697075-13697146)
chr2 (143-214)||(14945848-14945919)
chr2 (128-210)||(36272758-36272840)
chr2 (128-213)||(33299979-33300064)
chr2 (128-215)||(5562934-5563021)
chr2 (130-212)||(42061330-42061412)
chr2 (128-213)||(24475798-24475883)
chr2 (142-214)||(40095262-40095334)
chr2 (155-213)||(14242639-14242697)
chr2 (143-184)||(25333173-25333214)
chr2 (169-213)||(23860302-23860346)
chr2 (131-179)||(40216443-40216491)
[»] chr5 (8 HSPs)
chr5 (130-213)||(13988247-13988330)
chr5 (130-213)||(36890377-36890460)
chr5 (128-213)||(15285329-15285414)
chr5 (131-187)||(12248299-12248355)
chr5 (155-214)||(11247191-11247250)
chr5 (140-210)||(1447856-1447926)
chr5 (81-119)||(20151478-20151516)
chr5 (133-211)||(43100310-43100388)
[»] chr7 (12 HSPs)
chr7 (128-215)||(31741041-31741128)
chr7 (155-214)||(46576366-46576425)
chr7 (141-214)||(48460658-48460731)
chr7 (132-184)||(43359001-43359053)
chr7 (128-215)||(38754992-38755079)
chr7 (128-211)||(42974475-42974558)
chr7 (128-206)||(11752604-11752682)
chr7 (131-211)||(28713679-28713759)
chr7 (131-211)||(38349559-38349639)
chr7 (81-119)||(38754937-38754975)
chr7 (69-114)||(33496608-33496653)
chr7 (140-213)||(47480122-47480194)


Alignment Details
Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 6487925 - 6487647
Alignment:
Q  18 atacactcatcattcaaacaaggctaatgtttcattgacactcnnnnnnnnccatatacacaatatacca--ccccatgtgagcgtgtgtgagagacaaa 115  Q
    |||||||||||| |||||||||| |||||||||| ||||||||        |||||||||||||||||||  |||||| |||||||||||||||||||||    
T  6487925 atacactcatcaatcaaacaaggataatgtttcactgacactctttttt--ccatatacacaatataccatcccccatatgagcgtgtgtgagagacaaa 6487828  T
Q  116 aaa--tannnnnnngtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||  ||       |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6487827 aaaattatttttttgtggggaccacgtggacacatgtcacaattgtgtgtggatgtacaagtggtacatgccacctaaattggtctatgtatcactactc 6487728  T
Q  214 attaagcaatagannnnnnnnacaaagaacaaaaatgatgatgtgccgtattttaaatgaacgtgtcatacaatatgatgatg 296  Q
    |||||||||||          || ||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  6487727 attaagcaata-tgtttttttacgaagaacataaatgatgatgtgtcgtattttaaatgaacgtgtca-acaatctgatgatg 6487647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 526996 - 527081
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||||||||||| |||  | ||||||||||||||||||    
T  526996 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatgccacctaaggtggtctatgtatcactactc 527081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 26041055 - 26040972
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||  | || | |||||||||||    
T  26041055 gtggggaccacgtggacacatgtcacaattgtatgtgggtgtacaagtggtacatgccacctaaggtggtttgtgtatcactac 26040972  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 39858432 - 39858347
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||  | ||||||||||||||||||    
T  39858432 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtatatgccacctaaggtggtctatgtatcactactc 39858347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 46845753 - 46845838
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||||||||||  |||  | ||||||||||||||||||    
T  46845753 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatgccatctaaggtggtctatgtatcactactc 46845838  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 1673427 - 1673366
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||||    
T  1673427 attgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcactactcatt 1673366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 1995024 - 1994951
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  1995024 gacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 1994951  T

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Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 27325752 - 27325812
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  27325752 attgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 27325812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 44797565 - 44797649
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||||  |||||| | |||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||    
T  44797565 ggggaccacaaggacacttatcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactca 44797649  T

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Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 29637311 - 29637388
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcact 209  Q
    |||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||    
T  29637311 ggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcact 29637388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 49430573 - 49430646
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||||||| ||||||| | |||||| |||||||||||||||| |||  | ||||||||||||| ||||    
T  49430573 tggacacatgtcacaattgtgtattgatgtataagtggtacatgccacctaaggtggtctatgtatcaccactc 49430646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 2403049 - 2403107
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| ||||||||||||||||||||  |||  | ||||||||||||||||||    
T  2403049 attgtgtgtgggtgtacaagtggtacatgccatctaagatggtctatgtatcactactc 2403107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 15225088 - 15225170
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||||||| ||||||| ||||||| ||||  ||||| |||| |||| ||||||||||| |||  | |||||||||||||||    
T  15225088 gtggggaccatgtggacatatgtcacaattgcatgtgggtgtataagttgtacatgccacctaaggtggtctatgtatcacta 15225170  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 32267566 - 32267648
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||  |||||| |||||  ||||||||||| ||||||| | ||||||||||| |||  | |||||||||||||||||||    
T  32267566 ggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaaattgtacatgccacttaagatggtctatgtatcactactca 32267648  T

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Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 40314177 - 40314123
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacat 182  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||    
T  40314177 gtggggaccacatggacacatgtcacaattgtgtatggatgtataaatggtacat 40314123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 40294832 - 40294913
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||| | || ||||||||| ||||||| | | || ||||||||||| |||||| |||| | ||||||||||||||||||    
T  40294832 ggaccacatagatacatgtcacaattgtgtataggtggacaagtggtacgtgccacctaaagtggtctatgtatcactactc 40294913  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 13276561 - 13276645
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||| ||||| |||||||||||||  ||||||| ||  |||| ||||||||||| |||| |||  | |||||||||||||||||    
T  13276561 gtgggtaccacatggacacatgtcataattgtgtatgagtgtataagtggtacataccacctaaggtggtctatgtatcactact 13276645  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 7178213 - 7178291
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||| | ||||| |||||| ||||| ||||| ||||||| ||||||||| ||| |||  | ||||||||||||||||    
T  7178213 gaccacatagacacttgtcacaattgtatgtgggtgtacaaatggtacatgtcacctaaggtggtctatgtatcactac 7178291  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 187
Target Start/End: Original strand, 34311347 - 34311377
Alignment:
Q  157 tgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||||||||||||||||||||||||||    
T  34311347 tgtgtgtggatgtacaagtggtacatgccac 34311377  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 19989318 - 19989273
Alignment:
Q  134 accacgtggacacatgtcaccattgtgtgtggatgtacaagtggta 179  Q
    ||||| ||||||||||||||  |||| |||||||||||||||||||    
T  19989318 accacatggacacatgtcacacttgtatgtggatgtacaagtggta 19989273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 29731270 - 29731214
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||| |||||||||||||| ||| | ||||| ||||| ||||||| |||||||    
T  29731270 gggaccacatggacacatgtcacaattatatgtgggtgtactagtggtatatgccac 29731214  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 40030890 - 40030838
Alignment:
Q  161 tgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||| |||||||||||||||||| || |||  | ||||||||||||||||||    
T  40030890 tgtgggtgtacaagtggtacatgctacctaaggtggtctatgtatcactactc 40030838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 48489531 - 48489475
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||| |||||| ||||||| ||| | | ||||||||||||||||| |||||||    
T  48489531 gggaccacatggacagatgtcacaattatatatggatgtacaagtggtatatgccac 48489475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 5817477 - 5817564
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  5817477 gtggggaccacatggacacatgtcacaattgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcactactcat 5817564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 51579405 - 51579323
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||  | |||||||||||||||    
T  51579405 gtgggaaccacatggacacatgtcacaattgtatgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcacta 51579323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 20107196 - 20107108
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtgga-tgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||| ||||| |||||||||||||| |||||||| ||  ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  20107196 gtgggaaccacatggacacatgtcacaattgtgtgcggggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 20107108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 37605790 - 37605873
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  37605790 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 37605873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 55281291 - 55281208
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  55281291 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 55281208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 17044075 - 17044001
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  17044075 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 17044001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 25784005 - 25784090
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||| || || | ||||||||| ||| ||||||||||||||||||||||||||||| |||  |  |||||||||||||||||    
T  25784005 gtggggactacatgaatacatgtcacaattatgtgtggatgtacaagtggtacatgccacctaagatgatctatgtatcactactc 25784090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 25164581 - 25164652
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||    
T  25164581 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactact 25164652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 32525133 - 32525204
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||| |||| |||||||||||||||| |||||||| ||||||| |||  | ||||||||||||||||||    
T  32525133 gacacatatcacaattgtgtgtggatgtataagtggtatatgccacctaagatggtctatgtatcactactc 32525204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 24059230 - 24059316
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||| ||||| |||||||||||||| ||||| ||||| ||||||| || |||||||||  |||  | |||||||||||||||||||    
T  24059230 gtgggaaccacatggacacatgtcacaattgtatgtgggtgtacaaatgatacatgccatctaaggtggtctatgtatcactactca 24059316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 43749174 - 43749092
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||  |||||| |||||  ||| ||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  43749174 gggaccacaaggacacttgtcaaaattatgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 43749092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 45996018 - 45996076
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  45996018 attgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcactactc 45996076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 42179234 - 42179319
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||  ||| |||| ||||||||||| |||| |||  | |||||||||||| |||||    
T  42179234 gtggggaccacatggacacatgtcacaattgtgcatgggtgtataagtggtacataccacctaaggtggtctatgtatcattactc 42179319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 50498295 - 50498210
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| ||||||||||| | || |||  |  |||||||||||||||||    
T  50498295 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatactacctaaggtgatctatgtatcactactc 50498210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 48525396 - 48525328
Alignment:
Q  143 acacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    ||||||||||| ||| | ||||||||||||||||||| ||||||| |||| | || |||||||||||||    
T  48525396 acacatgtcacaattatatgtggatgtacaagtggtatatgccacctaaagtggtttatgtatcactac 48525328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 39631274 - 39631325
Alignment:
Q  167 tgtacaagtggtacatgccacataaattagtctatgtatcactactcattaa 218  Q
    ||||||||||||||||||||| |||  | |||||||||||||||||||||||    
T  39631274 tgtacaagtggtacatgccacctaaggtggtctatgtatcactactcattaa 39631325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 22364560 - 22364646
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    ||||||||| ||||||||| |||| ||||| | ||| |||| |||||||| ||||||| ||| ||  | ||||||||||||||||||    
T  22364560 ggggaccacatggacacatatcacaattgtatatgggtgtataagtggtatatgccacctaagttgatttatgtatcactactcatt 22364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 51579653 - 51579580
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||||||||| ||||| | ||| ||||||||||||||||||||| |||  | |||| ||||||||||||||    
T  51579653 tggacacatgtcacaattgtatttgggtgtacaagtggtacatgccacctaaggtggtct-tgtatcactactca 51579580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 32290279 - 32290215
Alignment:
Q  148 tgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||| ||||||| ||| |||| |||||||||||||||| |||  | |||||||||||||||||    
T  32290279 tgtcacaattgtgtatgggtgtataagtggtacatgccacctaagatggtctatgtatcactact 32290215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 41277300 - 41277220
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcac 208  Q
    ||||||||||| || ||||||||||| ||||| ||||| |||||| |||||||||| ||| |||  |  ||||||||||||    
T  41277300 gtggggaccacatgaacacatgtcacaattgtatgtgggtgtacaggtggtacatgtcacctaaggtgatctatgtatcac 41277220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 36851300 - 36851231
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcact 209  Q
    |||||||||||||| ||  || |||| ||||||||||||||||||||| |||  | ||||||| ||||||    
T  36851300 tggacacatgtcacaatcatgcgtgggtgtacaagtggtacatgccacttaaggtggtctatgcatcact 36851231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 8368469 - 8368545
Alignment:
Q  129 tggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtat 205  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||  | ||||||||||    
T  8368469 tggggaccacgtggacacatgtcacaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtat 8368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 45413635 - 45413723
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    ||||||||||  |||||||||||||| ||||||| |||||||| |||||||||||||||| |||  | |||||||||||||||||||||    
T  45413635 gtggggaccatatggacacatgtcacaattgtgtatggatgtataagtggtacatgccacctaaggtggtctatgtatcactactcatt 45413723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 28898080 - 28897991
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatta 217  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||  | ||||||||||||||||||||||    
T  28898080 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtatatgccacctaaggtggtctatgtatcactactcatta 28897991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 43066003 - 43066085
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||||||  |||||| |||||  ||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  43066003 ggggaccacaaggacacttgtcaaaattgtgtgtggatgtacaagtggtacatgccacctaaggtggtctatgtatcactact 43066085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 2599616 - 2599531
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| || ||||||||||| ||||||| ||| |||| |||||||||||||||| |||  | ||||||||||||||||||    
T  2599616 gtggggaccacatgaacacatgtcacaattgtgtatgggtgtataagtggtacatgccacctaaggtggtctatgtatcactactc 2599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 41075694 - 41075774
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcac 208  Q
    ||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| ||| |||  | |||||||||||||    
T  41075694 gtggggaccacatgaacacatgtcacaattgtatgtgggtgtacaagtggtacatgtcacctaaggtggtctatgtatcac 41075774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 27497251 - 27497174
Alignment:
Q  134 accacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||| || ||||||||| | ||||| ||||||||||||||||||||||||||| |||| | |||| ||||||||||||    
T  27497251 accacatgaacacatgtcgcaattgtctgtggatgtacaagtggtacatgccacctaaagtggtct-tgtatcactact 27497174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 1993750 - 1993823
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||| |||||  ||||||||||| |||||||||| |||||||||| |||  | |||||||||||||||||||    
T  1993750 ggacacttgtcaaaattgtgtgtgggtgtacaagtgatacatgccacctaaggtggtctatgtatcactactca 1993823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 10391402 - 10391487
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||| ||||||||| |||  |  ||||||||||| |||||    
T  10391402 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggcacatgccacctaagatgatctatgtatcattactc 10391487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 11904935 - 11904855
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||| |||  | || |||||||||||||    
T  11904935 gggaccacatggacacatgtcacaattatatgtgggtgtacaagtggtatatgccacctaaggtggtttatgtatcactac 11904855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 31774809 - 31774729
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcac 208  Q
    ||||||||||| || ||||||||||| ||||| ||||  ||||||||||||||||| ||| |||  | |||||||||||||    
T  31774809 gtggggaccacatgaacacatgtcacaattgtatgtgagtgtacaagtggtacatgtcacctaaggtggtctatgtatcac 31774729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 14342313 - 14342371
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||| |||||||||||||||| |||  | ||||||||||||||||||    
T  14342313 attgtgtgtgggtgtataagtggtacatgccacctaaggtggtctatgtatcactactc 14342371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 16465714 - 16465766
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgcc 185  Q
    |||||||| |||||||||||| ||||| ||||| | |||||||||||||||||    
T  16465714 gaccacgtagacacatgtcacaattgtatgtgggtatacaagtggtacatgcc 16465766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 5749069 - 5749107
Alignment:
Q  81 tataccaccccatgtgagcgtgtgtgagagacaaaaaat 119  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  5749069 tataccaccccatgtgagagtgtgtgagagacaataaat 5749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 45502742 - 45502688
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||| |||||||||||||| ||||| | || ||||||||||||||||| ||||    
T  45502742 gaccacatggacacatgtcacaattgtatatgaatgtacaagtggtacataccac 45502688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 4077086 - 4077143
Alignment:
Q  156 ttgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||| | ||||||||||||||||||| |||  | |||||| |||||||||||    
T  4077086 ttgtgtgtgggtatacaagtggtacatgccacctaaggtggtctatatatcactactc 4077143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 12142147 - 12142083
Alignment:
Q  147 atgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    ||||||| ||| | ||||||||||||||||||| ||||||| |||  | || |||||||||||||    
T  12142147 atgtcacaattatatgtggatgtacaagtggtatatgccacctaaggtggtttatgtatcactac 12142083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 44081144 - 44081068
Alignment:
Q  136 cacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||||| |||||||||| |||  |||||||||||||| || |||||||||  |||  | || ||||||||||||||    
T  44081144 cacgtgggcacatgtcacaattacgtgtggatgtacaaatgatacatgccatctaaggtggtgtatgtatcactact 44081068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 23004841 - 23004757
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||||||||| || | ||||||||| ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||    
T  23004841 gtggggaccacatgaatacatgtcacaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactact 23004757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 8330690 - 8330774
Alignment:
Q  129 tggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||| |||||| || |||| |||||||||| |||||||||||||||||||||  |||  | ||||||||||||||||||    
T  8330690 tggggaccacatggacatatatcacaattgtgtgtgaatgtacaagtggtacatgccatctaaggtggtctatgtatcactactc 8330774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 50989286 - 50989203
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  50989286 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 50989203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 51092418 - 51092335
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  51092418 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 51092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 33288213 - 33288136
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcact 209  Q
    ||||||| | ||||||| |||| ||||||||||| |||||||||||||||| |||| |||  | ||||||||||||||    
T  33288213 ggaccacatagacacatatcacaattgtgtgtgggtgtacaagtggtacataccacctaaggtggtctatgtatcact 33288136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 38247870 - 38247801
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||    
T  38247870 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcacta 38247801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 9271192 - 9271105
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcattaa 218  Q
    ||||||||  |||||| |||||  ||| ||||||| ||||||||||||||||||||  |||  | |||||||||||||||||| ||||    
T  9271192 gggaccacaaggacacttgtcaaaattatgtgtgggtgtacaagtggtacatgccatctaaggtggtctatgtatcactactctttaa 9271105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 12224102 - 12224184
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||| ||||||||||||| |||  | || ||||||||||||||    
T  12224102 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaaatggtacatgccacctaaggtggtttatgtatcactact 12224184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 54713597 - 54713532
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtat 205  Q
    |||||||||||||  ||| ||||||||||| ||||||||||||||||| |||  | ||||||||||    
T  54713597 tggacacatgtcataattatgtgtggatgttcaagtggtacatgccacctaacgtggtctatgtat 54713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 29915090 - 29915141
Alignment:
Q  162 gtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||| ||||||||||||| |||||||||||  | ||||||||||||||||||    
T  29915090 gtgggtgtacaagtggtatatgccacataaggtggtctatgtatcactactc 29915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 29964243 - 29964294
Alignment:
Q  162 gtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||| ||||||||||||| |||||||||||  | ||||||||||||||||||    
T  29964243 gtgggtgtacaagtggtatatgccacataaggtggtctatgtatcactactc 29964294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 48034908 - 48034994
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    |||||||||  |||||| |||||  ||||| ||||| ||||||||||||||||| ||| |||  | || |||||||||| |||||||    
T  48034908 ggggaccacaaggacacttgtcaaaattgtatgtgggtgtacaagtggtacatgtcacctaaggtggtttatgtatcaccactcatt 48034994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 8496777 - 8496705
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||| |||||  ||||| ||||| || |||||||||||||||||| |||  | |||||||||||| ||||||    
T  8496777 gacacttgtcaaaattgtatgtgggtggacaagtggtacatgccacctaaggtggtctatgtatcaatactca 8496705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 44092518 - 44092574
Alignment:
Q  159 tgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||||||||||||| ||||||||| |||| |  || |||||||| |||||||    
T  44092518 tgtgtggatgtacaagtggcacatgccacctaaagtgatcaatgtatcattactcat 44092574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 29429667 - 29429590
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatca 207  Q
    |||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||  |||||| |||||||    
T  29429667 ggggaccatgtggacacatgtcacaattgtatgtgggtgtacaagtggtacatgccacctaaggtagtctgtgtatca 29429590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 14314096 - 14314171
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||||    
T  14314096 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcatt 14314171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 23916057 - 23915972
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||||||||||  |||  |  |||||||||||||||||    
T  23916057 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatgccatctaaggtgatctatgtatcactactc 23915972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 1244655 - 1244735
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||||||  |||||| || ||  ||||||||||||||||||||||||||||||||| |||  | |||||||||||||||    
T  1244655 ggggaccacaaggacacttgccaaaattgtgtgtggatgtacaagtggtacatgccacttaaggtggtctatgtatcacta 1244735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 9045891 - 9045833
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||| |||||||||| |||  | ||||||||||||||||||    
T  9045891 attgtgtgtgggtgtacaagtgatacatgccacctaaggtggtctatgtatcactactc 9045833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 34792781 - 34792833
Alignment:
Q  161 tgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  34792781 tgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 34792833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 9521943 - 9522001
Alignment:
Q  157 tgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||| ||||||||||||||||||||| |||  |  ||||||||| |||||||||    
T  9521943 tgtgtgtgggtgtacaagtggtacatgccacctaaggtgatctatgtattactactcat 9522001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 12748290 - 12748217
Alignment:
Q  134 accacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatca 207  Q
    ||||| |||||| ||||||| ||| | ||||| ||||||||||||| ||||||| |||| | || |||||||||    
T  12748290 accacatggacagatgtcacaattatatgtgggtgtacaagtggtatatgccacctaaagtggtttatgtatca 12748217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 4434699 - 4434772
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||||  | |||||| |||||||||||    
T  4434699 tggacacatgtcacaatagtgtgtggaagtacaagtggtacatgccacataaggtggtctatatatcactactc 4434772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 32599348 - 32599430
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||  |||||| |||||  ||| ||||||||||||||||||||||||||||| |||  | ||||||||||||||||||    
T  32599348 gggaccacaaggacacttgtcaaaattatgtgtggatgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 32599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 3121695 - 3121610
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||  |||| |||||||||||||||  |||  | ||||||||||||||||||    
T  3121695 gtggggaccacatggacacatgtcacaattgtgtatgagtgtataagtggtacatgccatctaaggtggtctatgtatcactactc 3121610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 13697075 - 13697146
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||    
T  13697075 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactact 13697146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 14945848 - 14945919
Alignment:
Q  143 acacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||| ||  |||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||    
T  14945848 acacatgttacatttgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactca 14945919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 36272758 - 36272840
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||||||||  |||||| |||||  ||||||||||| |||| |||||||||||||||| |||  | |||||||||||||||    
T  36272758 gtggggaccacaaggacacttgtcaaaattgtgtgtgggtgtataagtggtacatgccacctaaggtggtctatgtatcacta 36272840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 33300064 - 33299979
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| || ||||||||||| ||||| | ||| |||| || ||||||||||||| |||  | ||||||||||||||||||    
T  33300064 gtggggaccacatgaacacatgtcacaattgtatatgggtgtataaatggtacatgccacttaaggtggtctatgtatcactactc 33299979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 5563021 - 5562934
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    |||| |||||| | |||||||||||  ||| | | || ||||| || ||||||||||||| |||| ||||||||||||||||||||||    
T  5563021 gtggagaccacatcgacacatgtcaaaattatatatgaatgtataaatggtacatgccacctaaaatagtctatgtatcactactcat 5562934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 42061330 - 42061412
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||||||  |||||| |||||  ||||| ||||| |||||||||||||||||||||  ||| |  ||||||||||||||||    
T  42061330 ggggaccacaaggacacttgtcaaaattgtatgtgggtgtacaagtggtacatgccacccaaagtgctctatgtatcactact 42061412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 24475798 - 24475883
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||| || |||||||||||||| ||||||| ||| |||| ||||| ||||| |||| |||  | |||||||||||| |||||    
T  24475798 gtggggactacatggacacatgtcacaattgtgtatgggtgtataagtgatacataccacctaaggtggtctatgtatcattactc 24475883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 40095334 - 40095262
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||| |||||  ||||| ||||||||||||||||||||||| ||  |||  | |||||||||||||||||||    
T  40095334 gacacttgtcaaaattgtatgtggatgtacaagtggtacatgtcatctaaggtggtctatgtatcactactca 40095262  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 14242639 - 14242697
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||| ||||||||| |||| |||  | ||||||||||||||||||    
T  14242639 attgtgtgtgggtgtacaggtggtacataccacctaagatggtctatgtatcactactc 14242697  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 25333214 - 25333173
Alignment:
Q  143 acacatgtcaccattgtgtgtggatgtacaagtggtacatgc 184  Q
    ||||||||||| | ||||||| ||||||||||||||||||||    
T  25333214 acacatgtcacaaatgtgtgttgatgtacaagtggtacatgc 25333173  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 23860302 - 23860346
Alignment:
Q  169 tacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||||||||||| |||  | ||||||||||||||||||    
T  23860302 tacaagtggtacatgccacctaaggtggtctatgtatcactactc 23860346  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 40216491 - 40216443
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggta 179  Q
    |||||||| |||||||||||||| ||| | ||||| |||||||||||||    
T  40216491 gggaccacatggacacatgtcacaattatatgtgggtgtacaagtggta 40216443  T

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Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 13988330 - 13988247
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  13988330 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 13988247  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 36890460 - 36890377
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  36890460 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 36890377  T

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Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 15285414 - 15285329
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||  |||| |||||||||||||||  |||  | ||||||||||||||||||    
T  15285414 gtggggaccacatggacacatgtcacaattgtgtatgagtgtataagtggtacatgccatctaaggtggtctatgtatcactactc 15285329  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 12248355 - 12248299
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||| |||||||||||||| ||| | ||||||||||||||||||| |||||||    
T  12248355 gggaccacatggacacatgtcacaattatatgtggatgtacaagtggtatatgccac 12248299  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 11247250 - 11247191
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||||||||||||||||||| ||| ||||||  |||  |||||||||||||||||||||    
T  11247250 attgtgtgtggatgtacaagtagtatatgccatctaaggtagtctatgtatcactactca 11247191  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 1447856 - 1447926
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||| ||||||| |||||| ||||||||| |||||||||||||||| |||| | |||||| ||| ||||    
T  1447856 tggacatatgtcacaattgtgcgtggatgtataagtggtacatgccacctaaagttgtctatatataacta 1447926  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 20151516 - 20151478
Alignment:
Q  81 tataccaccccatgtgagcgtgtgtgagagacaaaaaat 119  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  20151516 tataccaccccatgtgagagtgtgtgagagacaataaat 20151478  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 43100310 - 43100388
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||| |||||||||||||| ||| | ||||| ||||||||||||| || |||| |||  | || |||||||||||||    
T  43100310 gaccacatggacacatgtcacaattatatgtgggtgtacaagtggtatataccacctaagatggtttatgtatcactac 43100388  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 31741128 - 31741041
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||| ||| | |||||||||||| ||||||| ||| |||| |||||||||||||||| |||  | |||||||||||| |||||||    
T  31741128 gtggggagcacatagacacatgtcacaattgtgtatgggtgtataagtggtacatgccacctaaggtggtctatgtatcattactcat 31741041  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 46576366 - 46576425
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||    
T  46576366 attgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactca 46576425  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 48460731 - 48460658
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||| |||||  ||||| ||||||||||||| ||||||||||||| |||  | |||||||||||||||||||    
T  48460731 ggacacttgtcaaaattgtatgtggatgtacaaatggtacatgccacctaaggtggtctatgtatcactactca 48460658  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 43359053 - 43359001
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgc 184  Q
    ||||||||||||||| |||||| |||||| |||||||||||||| ||||||||    
T  43359053 ggaccacgtggacacgtgtcacaattgtgagtggatgtacaagtagtacatgc 43359001  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 38754992 - 38755079
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||| ||| |||||||||||||  ||| ||| ||| ||| ||||||||||||||||| |||  | |||||||||||| |||||||    
T  38754992 gtggggatcacatggacacatgtcataattatgtatgggtgttcaagtggtacatgccacctaaggtggtctatgtatcattactcat 38755079  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 42974475 - 42974558
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    ||||||||||  || ||||||||||| ||||| ||||| |||| |||||||||||||||| |||  | || |||||||||||||    
T  42974475 gtggggaccatatgaacacatgtcacaattgtatgtgggtgtataagtggtacatgccacctaaggtggtttatgtatcactac 42974558  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 11752682 - 11752604
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatc 206  Q
    |||||||||||||| ||||||||||| ||| | ||| | |||||||||| |||||||||| |||  | |||||||||||    
T  11752682 gtggggaccacgtgaacacatgtcacaattatatgtaggtgtacaagtgatacatgccacctaaggtggtctatgtatc 11752604  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 28713759 - 28713679
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||| ||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||| |||  | || |||||||||||||    
T  28713759 gggaacacatggacacatgtcacaattatatgtgggtgtacaagtggtatatgccacctaaggtggtttatgtatcactac 28713679  T

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Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 38349559 - 38349639
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||| ||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||| |||  | || |||||||||||||    
T  38349559 gggaacacatggacacatgtcacaattatatgtgggtgtacaagtggtatatgccacctaagatggtttatgtatcactac 38349639  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 38754937 - 38754975
Alignment:
Q  81 tataccaccccatgtgagcgtgtgtgagagacaaaaaat 119  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  38754937 tataccaccccatgtgagagtgtgtgagagacaataaat 38754975  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 33496653 - 33496608
Alignment:
Q  69 ccatatacacaatataccaccccatgtgagcgtgtgtgagagacaa 114  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||||||    
T  33496653 ccatacacacattataccactccatgtgagagtgtgtgagagacaa 33496608  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 47480122 - 47480194
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||||||| ||||| | ||| ||||||| ||||||||||||| |||  | |||||||||||| |||||    
T  47480122 tggacacatgtcacaattgtat-tgggtgtacaaatggtacatgccacctaaggtggtctatgtatcattactc 47480194  T

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