View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18455_low_4 (Length: 304)

Name: NF18455_low_4
Description: NF18455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18455_low_4
NF18455_low_4
[»] chr1 (23 HSPs)
chr1 (18-296)||(6487647-6487925)
chr1 (128-213)||(526996-527081)
chr1 (128-211)||(26040972-26041055)
chr1 (128-213)||(39858347-39858432)
chr1 (128-213)||(46845753-46845838)
chr1 (155-216)||(1673366-1673427)
chr1 (142-215)||(1994951-1995024)
chr1 (155-215)||(27325752-27325812)
chr1 (130-214)||(44797565-44797649)
chr1 (132-209)||(29637311-29637388)
chr1 (140-213)||(49430573-49430646)
chr1 (155-213)||(2403049-2403107)
chr1 (128-210)||(15225088-15225170)
chr1 (132-214)||(32267566-32267648)
chr1 (128-182)||(40314123-40314177)
chr1 (132-213)||(40294832-40294913)
chr1 (128-212)||(13276561-13276645)
chr1 (133-211)||(7178213-7178291)
chr1 (157-187)||(34311347-34311377)
chr1 (134-179)||(19989273-19989318)
chr1 (131-187)||(29731214-29731270)
chr1 (161-213)||(40030838-40030890)
chr1 (131-187)||(48489475-48489531)
[»] chr4 (21 HSPs)
chr4 (128-215)||(5817477-5817564)
chr4 (128-210)||(51579323-51579405)
chr4 (128-215)||(20107108-20107196)
chr4 (130-213)||(37605790-37605873)
chr4 (130-213)||(55281208-55281291)
chr4 (141-215)||(17044001-17044075)
chr4 (128-213)||(25784005-25784090)
chr4 (141-212)||(25164581-25164652)
chr4 (142-213)||(32525133-32525204)
chr4 (128-214)||(24059230-24059316)
chr4 (131-213)||(43749092-43749174)
chr4 (155-213)||(45996018-45996076)
chr4 (128-213)||(42179234-42179319)
chr4 (128-213)||(50498210-50498295)
chr4 (143-211)||(48525328-48525396)
chr4 (167-218)||(39631274-39631325)
chr4 (130-216)||(22364560-22364646)
chr4 (140-214)||(51579580-51579653)
chr4 (148-212)||(32290215-32290279)
chr4 (128-208)||(41277220-41277300)
chr4 (140-209)||(36851231-36851300)
[»] chr8 (18 HSPs)
chr8 (129-205)||(8368469-8368545)
chr8 (128-216)||(45413635-45413723)
chr8 (128-217)||(28897991-28898080)
chr8 (130-212)||(43066003-43066085)
chr8 (128-213)||(2599531-2599616)
chr8 (128-208)||(41075694-41075774)
chr8 (134-212)||(27497174-27497251)
chr8 (141-214)||(1993750-1993823)
chr8 (128-213)||(10391402-10391487)
chr8 (131-211)||(11904855-11904935)
chr8 (128-208)||(31774729-31774809)
chr8 (155-213)||(14342313-14342371)
chr8 (133-185)||(16465714-16465766)
chr8 (81-119)||(5749069-5749107)
chr8 (133-187)||(45502688-45502742)
chr8 (156-213)||(4077086-4077143)
chr8 (147-211)||(12142083-12142147)
chr8 (136-212)||(44081068-44081144)
[»] chr3 (14 HSPs)
chr3 (128-212)||(23004757-23004841)
chr3 (129-213)||(8330690-8330774)
chr3 (130-213)||(50989203-50989286)
chr3 (130-213)||(51092335-51092418)
chr3 (132-209)||(33288136-33288213)
chr3 (141-210)||(38247801-38247870)
chr3 (131-218)||(9271105-9271192)
chr3 (130-212)||(12224102-12224184)
chr3 (140-205)||(54713532-54713597)
chr3 (162-213)||(29915090-29915141)
chr3 (162-213)||(29964243-29964294)
chr3 (130-216)||(48034908-48034994)
chr3 (142-214)||(8496705-8496777)
chr3 (159-215)||(44092518-44092574)
[»] chr6 (8 HSPs)
chr6 (130-207)||(29429590-29429667)
chr6 (141-216)||(14314096-14314171)
chr6 (128-213)||(23915972-23916057)
chr6 (130-210)||(1244655-1244735)
chr6 (155-213)||(9045833-9045891)
chr6 (161-213)||(34792781-34792833)
chr6 (157-215)||(9521943-9522001)
chr6 (134-207)||(12748217-12748290)
[»] chr2 (15 HSPs)
chr2 (140-213)||(4434699-4434772)
chr2 (131-213)||(32599348-32599430)
chr2 (128-213)||(3121610-3121695)
chr2 (141-212)||(13697075-13697146)
chr2 (143-214)||(14945848-14945919)
chr2 (128-210)||(36272758-36272840)
chr2 (128-213)||(33299979-33300064)
chr2 (128-215)||(5562934-5563021)
chr2 (130-212)||(42061330-42061412)
chr2 (128-213)||(24475798-24475883)
chr2 (142-214)||(40095262-40095334)
chr2 (155-213)||(14242639-14242697)
chr2 (143-184)||(25333173-25333214)
chr2 (169-213)||(23860302-23860346)
chr2 (131-179)||(40216443-40216491)
[»] chr5 (8 HSPs)
chr5 (130-213)||(13988247-13988330)
chr5 (130-213)||(36890377-36890460)
chr5 (128-213)||(15285329-15285414)
chr5 (131-187)||(12248299-12248355)
chr5 (155-214)||(11247191-11247250)
chr5 (140-210)||(1447856-1447926)
chr5 (81-119)||(20151478-20151516)
chr5 (133-211)||(43100310-43100388)
[»] chr7 (12 HSPs)
chr7 (128-215)||(31741041-31741128)
chr7 (155-214)||(46576366-46576425)
chr7 (141-214)||(48460658-48460731)
chr7 (132-184)||(43359001-43359053)
chr7 (128-215)||(38754992-38755079)
chr7 (128-211)||(42974475-42974558)
chr7 (128-206)||(11752604-11752682)
chr7 (131-211)||(28713679-28713759)
chr7 (131-211)||(38349559-38349639)
chr7 (81-119)||(38754937-38754975)
chr7 (69-114)||(33496608-33496653)
chr7 (140-213)||(47480122-47480194)


Alignment Details
Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 6487925 - 6487647
Alignment:
Q  18 atacactcatcattcaaacaaggctaatgtttcattgacactcnnnnnnnnccatatacacaatatacca--ccccatgtgagcgtgtgtgagagacaaa 115  Q
    |||||||||||| |||||||||| |||||||||| ||||||||        |||||||||||||||||||  |||||| |||||||||||||||||||||    
T  6487925 atacactcatcaatcaaacaaggataatgtttcactgacactctttttt--ccatatacacaatataccatcccccatatgagcgtgtgtgagagacaaa 6487828  T
Q  116 aaa--tannnnnnngtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||  ||       |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6487827 aaaattatttttttgtggggaccacgtggacacatgtcacaattgtgtgtggatgtacaagtggtacatgccacctaaattggtctatgtatcactactc 6487728  T
Q  214 attaagcaatagannnnnnnnacaaagaacaaaaatgatgatgtgccgtattttaaatgaacgtgtcatacaatatgatgatg 296  Q
    |||||||||||          || ||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  6487727 attaagcaata-tgtttttttacgaagaacataaatgatgatgtgtcgtattttaaatgaacgtgtca-acaatctgatgatg 6487647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 526996 - 527081
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||||||||||| |||  | ||||||||||||||||||    
T  526996 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatgccacctaaggtggtctatgtatcactactc 527081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 26041055 - 26040972
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||  | || | |||||||||||    
T  26041055 gtggggaccacgtggacacatgtcacaattgtatgtgggtgtacaagtggtacatgccacctaaggtggtttgtgtatcactac 26040972  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 39858432 - 39858347
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||  | ||||||||||||||||||    
T  39858432 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtatatgccacctaaggtggtctatgtatcactactc 39858347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 46845753 - 46845838
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||||||||||  |||  | ||||||||||||||||||    
T  46845753 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatgccatctaaggtggtctatgtatcactactc 46845838  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 1673427 - 1673366
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||||    
T  1673427 attgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcactactcatt 1673366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 1995024 - 1994951
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  1995024 gacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 1994951  T

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Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 27325752 - 27325812
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  27325752 attgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 27325812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 44797565 - 44797649
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||||  |||||| | |||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||    
T  44797565 ggggaccacaaggacacttatcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactca 44797649  T

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Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 29637311 - 29637388
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcact 209  Q
    |||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||    
T  29637311 ggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcact 29637388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 49430573 - 49430646
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||||||| ||||||| | |||||| |||||||||||||||| |||  | ||||||||||||| ||||    
T  49430573 tggacacatgtcacaattgtgtattgatgtataagtggtacatgccacctaaggtggtctatgtatcaccactc 49430646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 2403049 - 2403107
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| ||||||||||||||||||||  |||  | ||||||||||||||||||    
T  2403049 attgtgtgtgggtgtacaagtggtacatgccatctaagatggtctatgtatcactactc 2403107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 15225088 - 15225170
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||||||| ||||||| ||||||| ||||  ||||| |||| |||| ||||||||||| |||  | |||||||||||||||    
T  15225088 gtggggaccatgtggacatatgtcacaattgcatgtgggtgtataagttgtacatgccacctaaggtggtctatgtatcacta 15225170  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 32267566 - 32267648
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||  |||||| |||||  ||||||||||| ||||||| | ||||||||||| |||  | |||||||||||||||||||    
T  32267566 ggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaaattgtacatgccacttaagatggtctatgtatcactactca 32267648  T

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Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 40314177 - 40314123
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacat 182  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||    
T  40314177 gtggggaccacatggacacatgtcacaattgtgtatggatgtataaatggtacat 40314123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 40294832 - 40294913
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||| | || ||||||||| ||||||| | | || ||||||||||| |||||| |||| | ||||||||||||||||||    
T  40294832 ggaccacatagatacatgtcacaattgtgtataggtggacaagtggtacgtgccacctaaagtggtctatgtatcactactc 40294913  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 13276561 - 13276645
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||| ||||| |||||||||||||  ||||||| ||  |||| ||||||||||| |||| |||  | |||||||||||||||||    
T  13276561 gtgggtaccacatggacacatgtcataattgtgtatgagtgtataagtggtacataccacctaaggtggtctatgtatcactact 13276645  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 7178213 - 7178291
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||| | ||||| |||||| ||||| ||||| ||||||| ||||||||| ||| |||  | ||||||||||||||||    
T  7178213 gaccacatagacacttgtcacaattgtatgtgggtgtacaaatggtacatgtcacctaaggtggtctatgtatcactac 7178291  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 187
Target Start/End: Original strand, 34311347 - 34311377
Alignment:
Q  157 tgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||||||||||||||||||||||||||    
T  34311347 tgtgtgtggatgtacaagtggtacatgccac 34311377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 19989318 - 19989273
Alignment:
Q  134 accacgtggacacatgtcaccattgtgtgtggatgtacaagtggta 179  Q
    ||||| ||||||||||||||  |||| |||||||||||||||||||    
T  19989318 accacatggacacatgtcacacttgtatgtggatgtacaagtggta 19989273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 29731270 - 29731214
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||| |||||||||||||| ||| | ||||| ||||| ||||||| |||||||    
T  29731270 gggaccacatggacacatgtcacaattatatgtgggtgtactagtggtatatgccac 29731214  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 40030890 - 40030838
Alignment:
Q  161 tgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||| |||||||||||||||||| || |||  | ||||||||||||||||||    
T  40030890 tgtgggtgtacaagtggtacatgctacctaaggtggtctatgtatcactactc 40030838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 48489531 - 48489475
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||| |||||| ||||||| ||| | | ||||||||||||||||| |||||||    
T  48489531 gggaccacatggacagatgtcacaattatatatggatgtacaagtggtatatgccac 48489475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 5817477 - 5817564
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  5817477 gtggggaccacatggacacatgtcacaattgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcactactcat 5817564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 51579405 - 51579323
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||  | |||||||||||||||    
T  51579405 gtgggaaccacatggacacatgtcacaattgtatgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcacta 51579323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 20107196 - 20107108
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtgga-tgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||| ||||| |||||||||||||| |||||||| ||  ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  20107196 gtgggaaccacatggacacatgtcacaattgtgtgcggggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 20107108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 37605790 - 37605873
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  37605790 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 37605873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 55281291 - 55281208
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  55281291 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 55281208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 17044075 - 17044001
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  17044075 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcat 17044001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 25784005 - 25784090
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||| || || | ||||||||| ||| ||||||||||||||||||||||||||||| |||  |  |||||||||||||||||    
T  25784005 gtggggactacatgaatacatgtcacaattatgtgtggatgtacaagtggtacatgccacctaagatgatctatgtatcactactc 25784090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 25164581 - 25164652
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||    
T  25164581 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactact 25164652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 32525133 - 32525204
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||| |||| |||||||||||||||| |||||||| ||||||| |||  | ||||||||||||||||||    
T  32525133 gacacatatcacaattgtgtgtggatgtataagtggtatatgccacctaagatggtctatgtatcactactc 32525204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 24059230 - 24059316
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||| ||||| |||||||||||||| ||||| ||||| ||||||| || |||||||||  |||  | |||||||||||||||||||    
T  24059230 gtgggaaccacatggacacatgtcacaattgtatgtgggtgtacaaatgatacatgccatctaaggtggtctatgtatcactactca 24059316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 43749174 - 43749092
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||  |||||| |||||  ||| ||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  43749174 gggaccacaaggacacttgtcaaaattatgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 43749092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 45996018 - 45996076
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  45996018 attgtgtgtgggtgtacaagtggtacatgccacctaagatggtctatgtatcactactc 45996076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 42179234 - 42179319
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||  ||| |||| ||||||||||| |||| |||  | |||||||||||| |||||    
T  42179234 gtggggaccacatggacacatgtcacaattgtgcatgggtgtataagtggtacataccacctaaggtggtctatgtatcattactc 42179319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 50498295 - 50498210
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| ||||||||||| | || |||  |  |||||||||||||||||    
T  50498295 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatactacctaaggtgatctatgtatcactactc 50498210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 48525396 - 48525328
Alignment:
Q  143 acacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    ||||||||||| ||| | ||||||||||||||||||| ||||||| |||| | || |||||||||||||    
T  48525396 acacatgtcacaattatatgtggatgtacaagtggtatatgccacctaaagtggtttatgtatcactac 48525328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 39631274 - 39631325
Alignment:
Q  167 tgtacaagtggtacatgccacataaattagtctatgtatcactactcattaa 218  Q
    ||||||||||||||||||||| |||  | |||||||||||||||||||||||    
T  39631274 tgtacaagtggtacatgccacctaaggtggtctatgtatcactactcattaa 39631325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 22364560 - 22364646
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    ||||||||| ||||||||| |||| ||||| | ||| |||| |||||||| ||||||| ||| ||  | ||||||||||||||||||    
T  22364560 ggggaccacatggacacatatcacaattgtatatgggtgtataagtggtatatgccacctaagttgatttatgtatcactactcatt 22364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 51579653 - 51579580
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||||||||| ||||| | ||| ||||||||||||||||||||| |||  | |||| ||||||||||||||    
T  51579653 tggacacatgtcacaattgtatttgggtgtacaagtggtacatgccacctaaggtggtct-tgtatcactactca 51579580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 32290279 - 32290215
Alignment:
Q  148 tgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||| ||||||| ||| |||| |||||||||||||||| |||  | |||||||||||||||||    
T  32290279 tgtcacaattgtgtatgggtgtataagtggtacatgccacctaagatggtctatgtatcactact 32290215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 41277300 - 41277220
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcac 208  Q
    ||||||||||| || ||||||||||| ||||| ||||| |||||| |||||||||| ||| |||  |  ||||||||||||    
T  41277300 gtggggaccacatgaacacatgtcacaattgtatgtgggtgtacaggtggtacatgtcacctaaggtgatctatgtatcac 41277220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 36851300 - 36851231
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcact 209  Q
    |||||||||||||| ||  || |||| ||||||||||||||||||||| |||  | ||||||| ||||||    
T  36851300 tggacacatgtcacaatcatgcgtgggtgtacaagtggtacatgccacttaaggtggtctatgcatcact 36851231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 8368469 - 8368545
Alignment:
Q  129 tggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtat 205  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||  | ||||||||||    
T  8368469 tggggaccacgtggacacatgtcacaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtat 8368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 45413635 - 45413723
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    ||||||||||  |||||||||||||| ||||||| |||||||| |||||||||||||||| |||  | |||||||||||||||||||||    
T  45413635 gtggggaccatatggacacatgtcacaattgtgtatggatgtataagtggtacatgccacctaaggtggtctatgtatcactactcatt 45413723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 28898080 - 28897991
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatta 217  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||  | ||||||||||||||||||||||    
T  28898080 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtatatgccacctaaggtggtctatgtatcactactcatta 28897991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 43066003 - 43066085
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||||||  |||||| |||||  ||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  43066003 ggggaccacaaggacacttgtcaaaattgtgtgtggatgtacaagtggtacatgccacctaaggtggtctatgtatcactact 43066085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 2599616 - 2599531
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| || ||||||||||| ||||||| ||| |||| |||||||||||||||| |||  | ||||||||||||||||||    
T  2599616 gtggggaccacatgaacacatgtcacaattgtgtatgggtgtataagtggtacatgccacctaaggtggtctatgtatcactactc 2599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 41075694 - 41075774
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcac 208  Q
    ||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| ||| |||  | |||||||||||||    
T  41075694 gtggggaccacatgaacacatgtcacaattgtatgtgggtgtacaagtggtacatgtcacctaaggtggtctatgtatcac 41075774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 27497251 - 27497174
Alignment:
Q  134 accacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||| || ||||||||| | ||||| ||||||||||||||||||||||||||| |||| | |||| ||||||||||||    
T  27497251 accacatgaacacatgtcgcaattgtctgtggatgtacaagtggtacatgccacctaaagtggtct-tgtatcactact 27497174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 1993750 - 1993823
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||| |||||  ||||||||||| |||||||||| |||||||||| |||  | |||||||||||||||||||    
T  1993750 ggacacttgtcaaaattgtgtgtgggtgtacaagtgatacatgccacctaaggtggtctatgtatcactactca 1993823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 10391402 - 10391487
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||| ||||||||| |||  |  ||||||||||| |||||    
T  10391402 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggcacatgccacctaagatgatctatgtatcattactc 10391487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 11904935 - 11904855
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||| |||  | || |||||||||||||    
T  11904935 gggaccacatggacacatgtcacaattatatgtgggtgtacaagtggtatatgccacctaaggtggtttatgtatcactac 11904855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 31774809 - 31774729
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcac 208  Q
    ||||||||||| || ||||||||||| ||||| ||||  ||||||||||||||||| ||| |||  | |||||||||||||    
T  31774809 gtggggaccacatgaacacatgtcacaattgtatgtgagtgtacaagtggtacatgtcacctaaggtggtctatgtatcac 31774729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 14342313 - 14342371
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||| |||||||||||||||| |||  | ||||||||||||||||||    
T  14342313 attgtgtgtgggtgtataagtggtacatgccacctaaggtggtctatgtatcactactc 14342371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 16465714 - 16465766
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgcc 185  Q
    |||||||| |||||||||||| ||||| ||||| | |||||||||||||||||    
T  16465714 gaccacgtagacacatgtcacaattgtatgtgggtatacaagtggtacatgcc 16465766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 5749069 - 5749107
Alignment:
Q  81 tataccaccccatgtgagcgtgtgtgagagacaaaaaat 119  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  5749069 tataccaccccatgtgagagtgtgtgagagacaataaat 5749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 45502742 - 45502688
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||| |||||||||||||| ||||| | || ||||||||||||||||| ||||    
T  45502742 gaccacatggacacatgtcacaattgtatatgaatgtacaagtggtacataccac 45502688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 4077086 - 4077143
Alignment:
Q  156 ttgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||| | ||||||||||||||||||| |||  | |||||| |||||||||||    
T  4077086 ttgtgtgtgggtatacaagtggtacatgccacctaaggtggtctatatatcactactc 4077143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 12142147 - 12142083
Alignment:
Q  147 atgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    ||||||| ||| | ||||||||||||||||||| ||||||| |||  | || |||||||||||||    
T  12142147 atgtcacaattatatgtggatgtacaagtggtatatgccacctaaggtggtttatgtatcactac 12142083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 44081144 - 44081068
Alignment:
Q  136 cacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||||| |||||||||| |||  |||||||||||||| || |||||||||  |||  | || ||||||||||||||    
T  44081144 cacgtgggcacatgtcacaattacgtgtggatgtacaaatgatacatgccatctaaggtggtgtatgtatcactact 44081068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 23004841 - 23004757
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    ||||||||||| || | ||||||||| ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||    
T  23004841 gtggggaccacatgaatacatgtcacaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactact 23004757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 8330690 - 8330774
Alignment:
Q  129 tggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||| |||||| || |||| |||||||||| |||||||||||||||||||||  |||  | ||||||||||||||||||    
T  8330690 tggggaccacatggacatatatcacaattgtgtgtgaatgtacaagtggtacatgccatctaaggtggtctatgtatcactactc 8330774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 50989286 - 50989203
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  50989286 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 50989203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 51092418 - 51092335
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  51092418 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 51092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 33288213 - 33288136
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcact 209  Q
    ||||||| | ||||||| |||| ||||||||||| |||||||||||||||| |||| |||  | ||||||||||||||    
T  33288213 ggaccacatagacacatatcacaattgtgtgtgggtgtacaagtggtacataccacctaaggtggtctatgtatcact 33288136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 38247870 - 38247801
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||    
T  38247870 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcacta 38247801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 9271192 - 9271105
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcattaa 218  Q
    ||||||||  |||||| |||||  ||| ||||||| ||||||||||||||||||||  |||  | |||||||||||||||||| ||||    
T  9271192 gggaccacaaggacacttgtcaaaattatgtgtgggtgtacaagtggtacatgccatctaaggtggtctatgtatcactactctttaa 9271105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 12224102 - 12224184
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||| ||||||||||||| |||  | || ||||||||||||||    
T  12224102 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaaatggtacatgccacctaaggtggtttatgtatcactact 12224184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 54713597 - 54713532
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtat 205  Q
    |||||||||||||  ||| ||||||||||| ||||||||||||||||| |||  | ||||||||||    
T  54713597 tggacacatgtcataattatgtgtggatgttcaagtggtacatgccacctaacgtggtctatgtat 54713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 29915090 - 29915141
Alignment:
Q  162 gtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||| ||||||||||||| |||||||||||  | ||||||||||||||||||    
T  29915090 gtgggtgtacaagtggtatatgccacataaggtggtctatgtatcactactc 29915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 29964243 - 29964294
Alignment:
Q  162 gtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||| ||||||||||||| |||||||||||  | ||||||||||||||||||    
T  29964243 gtgggtgtacaagtggtatatgccacataaggtggtctatgtatcactactc 29964294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 48034908 - 48034994
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    |||||||||  |||||| |||||  ||||| ||||| ||||||||||||||||| ||| |||  | || |||||||||| |||||||    
T  48034908 ggggaccacaaggacacttgtcaaaattgtatgtgggtgtacaagtggtacatgtcacctaaggtggtttatgtatcaccactcatt 48034994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 8496777 - 8496705
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||| |||||  ||||| ||||| || |||||||||||||||||| |||  | |||||||||||| ||||||    
T  8496777 gacacttgtcaaaattgtatgtgggtggacaagtggtacatgccacctaaggtggtctatgtatcaatactca 8496705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 44092518 - 44092574
Alignment:
Q  159 tgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||||||||||||| ||||||||| |||| |  || |||||||| |||||||    
T  44092518 tgtgtggatgtacaagtggcacatgccacctaaagtgatcaatgtatcattactcat 44092574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 29429667 - 29429590
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatca 207  Q
    |||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||  |||||| |||||||    
T  29429667 ggggaccatgtggacacatgtcacaattgtatgtgggtgtacaagtggtacatgccacctaaggtagtctgtgtatca 29429590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 14314096 - 14314171
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcatt 216  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||||    
T  14314096 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactcatt 14314171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 23916057 - 23915972
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||| |||||||||||||||  |||  |  |||||||||||||||||    
T  23916057 gtggggaccacatggacacatgtcacaattgtgtatgggtgtataagtggtacatgccatctaaggtgatctatgtatcactactc 23915972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 1244655 - 1244735
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||||||  |||||| || ||  ||||||||||||||||||||||||||||||||| |||  | |||||||||||||||    
T  1244655 ggggaccacaaggacacttgccaaaattgtgtgtggatgtacaagtggtacatgccacttaaggtggtctatgtatcacta 1244735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 9045891 - 9045833
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||| |||||||||| |||  | ||||||||||||||||||    
T  9045891 attgtgtgtgggtgtacaagtgatacatgccacctaaggtggtctatgtatcactactc 9045833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 34792781 - 34792833
Alignment:
Q  161 tgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  34792781 tgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 34792833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 9521943 - 9522001
Alignment:
Q  157 tgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||||| ||||||||||||||||||||| |||  |  ||||||||| |||||||||    
T  9521943 tgtgtgtgggtgtacaagtggtacatgccacctaaggtgatctatgtattactactcat 9522001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 12748290 - 12748217
Alignment:
Q  134 accacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatca 207  Q
    ||||| |||||| ||||||| ||| | ||||| ||||||||||||| ||||||| |||| | || |||||||||    
T  12748290 accacatggacagatgtcacaattatatgtgggtgtacaagtggtatatgccacctaaagtggtttatgtatca 12748217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 4434699 - 4434772
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||||  | |||||| |||||||||||    
T  4434699 tggacacatgtcacaatagtgtgtggaagtacaagtggtacatgccacataaggtggtctatatatcactactc 4434772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 32599348 - 32599430
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||  |||||| |||||  ||| ||||||||||||||||||||||||||||| |||  | ||||||||||||||||||    
T  32599348 gggaccacaaggacacttgtcaaaattatgtgtggatgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 32599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 3121695 - 3121610
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||  |||| |||||||||||||||  |||  | ||||||||||||||||||    
T  3121695 gtggggaccacatggacacatgtcacaattgtgtatgagtgtataagtggtacatgccatctaaggtggtctatgtatcactactc 3121610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 13697075 - 13697146
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||    
T  13697075 ggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactact 13697146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 14945848 - 14945919
Alignment:
Q  143 acacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||||| ||  |||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||    
T  14945848 acacatgttacatttgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactca 14945919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 36272758 - 36272840
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||||||||  |||||| |||||  ||||||||||| |||| |||||||||||||||| |||  | |||||||||||||||    
T  36272758 gtggggaccacaaggacacttgtcaaaattgtgtgtgggtgtataagtggtacatgccacctaaggtggtctatgtatcacta 36272840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 33300064 - 33299979
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| || ||||||||||| ||||| | ||| |||| || ||||||||||||| |||  | ||||||||||||||||||    
T  33300064 gtggggaccacatgaacacatgtcacaattgtatatgggtgtataaatggtacatgccacttaaggtggtctatgtatcactactc 33299979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 5563021 - 5562934
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    |||| |||||| | |||||||||||  ||| | | || ||||| || ||||||||||||| |||| ||||||||||||||||||||||    
T  5563021 gtggagaccacatcgacacatgtcaaaattatatatgaatgtataaatggtacatgccacctaaaatagtctatgtatcactactcat 5562934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 42061330 - 42061412
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactact 212  Q
    |||||||||  |||||| |||||  ||||| ||||| |||||||||||||||||||||  ||| |  ||||||||||||||||    
T  42061330 ggggaccacaaggacacttgtcaaaattgtatgtgggtgtacaagtggtacatgccacccaaagtgctctatgtatcactact 42061412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 24475798 - 24475883
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||| || |||||||||||||| ||||||| ||| |||| ||||| ||||| |||| |||  | |||||||||||| |||||    
T  24475798 gtggggactacatggacacatgtcacaattgtgtatgggtgtataagtgatacataccacctaaggtggtctatgtatcattactc 24475883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 40095334 - 40095262
Alignment:
Q  142 gacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||| |||||  ||||| ||||||||||||||||||||||| ||  |||  | |||||||||||||||||||    
T  40095334 gacacttgtcaaaattgtatgtggatgtacaagtggtacatgtcatctaaggtggtctatgtatcactactca 40095262  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 14242639 - 14242697
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||| ||||||||| |||| |||  | ||||||||||||||||||    
T  14242639 attgtgtgtgggtgtacaggtggtacataccacctaagatggtctatgtatcactactc 14242697  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 25333214 - 25333173
Alignment:
Q  143 acacatgtcaccattgtgtgtggatgtacaagtggtacatgc 184  Q
    ||||||||||| | ||||||| ||||||||||||||||||||    
T  25333214 acacatgtcacaaatgtgtgttgatgtacaagtggtacatgc 25333173  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 23860302 - 23860346
Alignment:
Q  169 tacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||||||||||| |||  | ||||||||||||||||||    
T  23860302 tacaagtggtacatgccacctaaggtggtctatgtatcactactc 23860346  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 40216491 - 40216443
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggta 179  Q
    |||||||| |||||||||||||| ||| | ||||| |||||||||||||    
T  40216491 gggaccacatggacacatgtcacaattatatgtgggtgtacaagtggta 40216443  T

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Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 13988330 - 13988247
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  13988330 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 13988247  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 36890460 - 36890377
Alignment:
Q  130 ggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||  |||||| |||||  ||||||||||| ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  36890460 ggggaccacaaggacacttgtcaaaattgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactc 36890377  T

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Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 15285414 - 15285329
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    ||||||||||| |||||||||||||| ||||||| ||  |||| |||||||||||||||  |||  | ||||||||||||||||||    
T  15285414 gtggggaccacatggacacatgtcacaattgtgtatgagtgtataagtggtacatgccatctaaggtggtctatgtatcactactc 15285329  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 12248355 - 12248299
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccac 187  Q
    |||||||| |||||||||||||| ||| | ||||||||||||||||||| |||||||    
T  12248355 gggaccacatggacacatgtcacaattatatgtggatgtacaagtggtatatgccac 12248299  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 11247250 - 11247191
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||||||||||||||||||| ||| ||||||  |||  |||||||||||||||||||||    
T  11247250 attgtgtgtggatgtacaagtagtatatgccatctaaggtagtctatgtatcactactca 11247191  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 1447856 - 1447926
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcacta 210  Q
    |||||| ||||||| |||||| ||||||||| |||||||||||||||| |||| | |||||| ||| ||||    
T  1447856 tggacatatgtcacaattgtgcgtggatgtataagtggtacatgccacctaaagttgtctatatataacta 1447926  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 20151516 - 20151478
Alignment:
Q  81 tataccaccccatgtgagcgtgtgtgagagacaaaaaat 119  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  20151516 tataccaccccatgtgagagtgtgtgagagacaataaat 20151478  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 43100310 - 43100388
Alignment:
Q  133 gaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||||| |||||||||||||| ||| | ||||| ||||||||||||| || |||| |||  | || |||||||||||||    
T  43100310 gaccacatggacacatgtcacaattatatgtgggtgtacaagtggtatataccacctaagatggtttatgtatcactac 43100388  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 31741128 - 31741041
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||| ||| | |||||||||||| ||||||| ||| |||| |||||||||||||||| |||  | |||||||||||| |||||||    
T  31741128 gtggggagcacatagacacatgtcacaattgtgtatgggtgtataagtggtacatgccacctaaggtggtctatgtatcattactcat 31741041  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 46576366 - 46576425
Alignment:
Q  155 attgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    ||||||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||    
T  46576366 attgtgtgtgggtgtacaagtggtacatgccacctaaggtggtctatgtatcactactca 46576425  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 48460731 - 48460658
Alignment:
Q  141 ggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactca 214  Q
    |||||| |||||  ||||| ||||||||||||| ||||||||||||| |||  | |||||||||||||||||||    
T  48460731 ggacacttgtcaaaattgtatgtggatgtacaaatggtacatgccacctaaggtggtctatgtatcactactca 48460658  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 43359053 - 43359001
Alignment:
Q  132 ggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgc 184  Q
    ||||||||||||||| |||||| |||||| |||||||||||||| ||||||||    
T  43359053 ggaccacgtggacacgtgtcacaattgtgagtggatgtacaagtagtacatgc 43359001  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 38754992 - 38755079
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactcat 215  Q
    ||||||| ||| |||||||||||||  ||| ||| ||| ||| ||||||||||||||||| |||  | |||||||||||| |||||||    
T  38754992 gtggggatcacatggacacatgtcataattatgtatgggtgttcaagtggtacatgccacctaaggtggtctatgtatcattactcat 38755079  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 42974475 - 42974558
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    ||||||||||  || ||||||||||| ||||| ||||| |||| |||||||||||||||| |||  | || |||||||||||||    
T  42974475 gtggggaccatatgaacacatgtcacaattgtatgtgggtgtataagtggtacatgccacctaaggtggtttatgtatcactac 42974558  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 11752682 - 11752604
Alignment:
Q  128 gtggggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatc 206  Q
    |||||||||||||| ||||||||||| ||| | ||| | |||||||||| |||||||||| |||  | |||||||||||    
T  11752682 gtggggaccacgtgaacacatgtcacaattatatgtaggtgtacaagtgatacatgccacctaaggtggtctatgtatc 11752604  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 28713759 - 28713679
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||| ||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||| |||  | || |||||||||||||    
T  28713759 gggaacacatggacacatgtcacaattatatgtgggtgtacaagtggtatatgccacctaaggtggtttatgtatcactac 28713679  T

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Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 38349559 - 38349639
Alignment:
Q  131 gggaccacgtggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactac 211  Q
    |||| ||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||| |||  | || |||||||||||||    
T  38349559 gggaacacatggacacatgtcacaattatatgtgggtgtacaagtggtatatgccacctaagatggtttatgtatcactac 38349639  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 38754937 - 38754975
Alignment:
Q  81 tataccaccccatgtgagcgtgtgtgagagacaaaaaat 119  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  38754937 tataccaccccatgtgagagtgtgtgagagacaataaat 38754975  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 33496653 - 33496608
Alignment:
Q  69 ccatatacacaatataccaccccatgtgagcgtgtgtgagagacaa 114  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||||||    
T  33496653 ccatacacacattataccactccatgtgagagtgtgtgagagacaa 33496608  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 47480122 - 47480194
Alignment:
Q  140 tggacacatgtcaccattgtgtgtggatgtacaagtggtacatgccacataaattagtctatgtatcactactc 213  Q
    |||||||||||||| ||||| | ||| ||||||| ||||||||||||| |||  | |||||||||||| |||||    
T  47480122 tggacacatgtcacaattgtat-tgggtgtacaaatggtacatgccacctaaggtggtctatgtatcattactc 47480194  T

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