View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18457_high_17 (Length: 322)
Name: NF18457_high_17
Description: NF18457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18457_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 44828489 - 44828804
Alignment:
| Q |
1 |
gacataaaattagctgctcgtacgcaattaatacaacacatatcacaaagaaacttatatttgtaatacatattagaattaacaatcatcaaagctatat |
100 |
Q |
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| T |
44828489 |
gacataaaattagctgctcatacgtaattaatacaacacatatcacaaagaaacttatttttgtaatacatattagaattaacaatcatcaaagctatat |
44828588 |
T |
|
| Q |
101 |
taatcttgtaaattactctacgttacctgaatttctgaactggtacctccgatgacatccttaacaatactcaacacttcctcagttaaaccatgttcat |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44828589 |
taatcttgtaaattactctacattacctgaatttctgaactggtacctccgatgacatccttaacaatactcaacacttcctcagttaaaccatgttcat |
44828688 |
T |
|
| Q |
201 |
caaataccgtcctaatatattaaatagtcacaagataatatgtttagttaaggagaaacttaaattattttaatgaagtagataaaatgatgcacaataa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44828689 |
caaataccgtcctaatatattaaatagtcacaagataatatgtttagttaaggagaaacttaaattattttaatgaagtagataaaatgatgcacaataa |
44828788 |
T |
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| Q |
301 |
gtagaattttcttgga |
316 |
Q |
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|||||||||| ||||| |
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| T |
44828789 |
gtagaatttttttgga |
44828804 |
T |
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