View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18457_high_20 (Length: 274)
Name: NF18457_high_20
Description: NF18457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18457_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 44828775 - 44829036
Alignment:
| Q |
1 |
atgatgcacaataagtagaannnnnnnggaggtccagcaaaacatgtattacatatgaattaaatttgaaatttaagaaatttacatctttaactctact |
100 |
Q |
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| T |
44828775 |
atgatgcacaataagtagaatttttttggaggtccagcaaaacatgtattacatatcaattaaatttgaaatttaagaa-tttacatctttaattctact |
44828873 |
T |
|
| Q |
101 |
gataaattaaatagaacttctaaatgtaagtataataacatgtacattttgatttacctaataaatcggtcttcaccctgagaaaatttacgttcaactt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44828874 |
gataaattaaatagaacttctaaatgtaagtataataacatgtacattttgatttacctaataaatcggtcttcaccctgagaaaatttacgttcaactt |
44828973 |
T |
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| Q |
201 |
ccttgtcctcgtttgactcttcatcactatcactgcatactaatgtttcaccttcctgatgat |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44828974 |
ccttgtcctcgtttgactcttcatcactatcactgcatactaatgtttcaccttcctgatgat |
44829036 |
T |
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