View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18457_low_13 (Length: 358)
Name: NF18457_low_13
Description: NF18457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18457_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 44828992 - 44829337
Alignment:
| Q |
1 |
cttcatcactatcactgcatacttatgtttcaccttcctgatgattataatatacatttctttttctagaaactgcctgatctgcagtcattttttcatt |
100 |
Q |
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| T |
44828992 |
cttcatcactatcactgcatactaatgtttcaccttcctgatgattataatatacatttctttttctagaaactgcctgatctgcagtcattttttcatt |
44829091 |
T |
|
| Q |
101 |
tctattttgcaagaaatgttttcaaaaagtagtaaatagacgacacaaatttaacatagattgatcaataacatttgacatcaaatgcatattaaacata |
200 |
Q |
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| T |
44829092 |
tctattttgcaagaaatgttttcagaaagtagtaaatagacgacacaaatttaacatagattgatcaataacatttgacatcaaatgcatattaaacata |
44829191 |
T |
|
| Q |
201 |
cactttcacttcctaaaaattttcatgtaataggattcacaacatgtcattgaaatttataagtcaaacacacctggctaaatgtatccaagacgtatat |
300 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
44829192 |
cactttcacttcctaaaaattttcatgtaagaggattcacaacatgtcattgaaatttataattcaaacacacctggctaaatgtatccaagacgtatat |
44829291 |
T |
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| Q |
301 |
ggaggtaacctgttgatgcttggcatcctgatagttctcacaggtt |
346 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44829292 |
ggaggtaacctgttgatgcttggcatcctgatagttctcacaggtt |
44829337 |
T |
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