View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18457_low_15 (Length: 347)
Name: NF18457_low_15
Description: NF18457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18457_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 16 - 330
Target Start/End: Original strand, 26351163 - 26351475
Alignment:
| Q |
16 |
aatatgagatgaaagaattgaaattacaccttgaatccagttatgccaacggttgcgaatagtgtatggaactaaggatgagtccctaaaaacctgcaaa |
115 |
Q |
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| T |
26351163 |
aatatgagatgaaagaattgaaattacaccttgagtacaattatgccaacggttgcgaatagtgtatggaactaaggatgagtccctaaaaacctgcaaa |
26351262 |
T |
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| Q |
116 |
gcactttaaggatcaccttccacctatagatgatgccaatgatgttgaaccgcatattccaaagcaaacatgaagagtctatagaagatccgattcaaaa |
215 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
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| T |
26351263 |
gcactctaaggatcaccttccacctatagatgatgccaatgatgttgaaccgcatattccaaagcaaacatgaagagtc--taaaagatccgattcaaaa |
26351360 |
T |
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| Q |
216 |
ccagaaagaggactcatgttgcaacttctgtctctcagcaacaggatacatgcactaattggattaacacacaagaaatcgacattttgtgataatattt |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26351361 |
acagaaagaggactcatgttgcaacttctgtctctcagcaacaggatacatgcactaattggattaacacacaagaaatcgacattttgtgataatattt |
26351460 |
T |
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| Q |
316 |
tggtgacattctata |
330 |
Q |
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|||||| |||||||| |
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| T |
26351461 |
tggtgaaattctata |
26351475 |
T |
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