View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18458_high_8 (Length: 248)

Name: NF18458_high_8
Description: NF18458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18458_high_8
NF18458_high_8
[»] chr7 (14 HSPs)
chr7 (69-243)||(11535188-11535364)
chr7 (69-243)||(11542106-11542282)
chr7 (69-243)||(29328689-29328869)
chr7 (69-243)||(18561938-18562114)
chr7 (69-243)||(12739447-12739623)
chr7 (69-243)||(12751764-12751940)
chr7 (69-231)||(15153373-15153536)
chr7 (69-209)||(24850719-24850861)
chr7 (69-243)||(11557199-11557369)
chr7 (83-220)||(13393080-13393220)
chr7 (176-243)||(2653114-2653181)
chr7 (176-243)||(9978842-9978909)
chr7 (97-154)||(9978775-9978832)
chr7 (69-109)||(13393029-13393069)
[»] chr4 (24 HSPs)
chr4 (69-243)||(18263117-18263293)
chr4 (69-243)||(8859097-8859273)
chr4 (69-243)||(18269978-18270154)
chr4 (73-243)||(26971374-26971546)
chr4 (69-243)||(28392268-28392444)
chr4 (69-231)||(5714877-5715042)
chr4 (69-231)||(869526-869690)
chr4 (69-231)||(5708242-5708406)
chr4 (69-243)||(19919632-19919808)
chr4 (69-243)||(19925861-19926037)
chr4 (69-241)||(4425743-4425917)
chr4 (69-243)||(10620434-10620610)
chr4 (69-243)||(10627516-10627692)
chr4 (69-243)||(55613614-55613789)
chr4 (69-241)||(8846108-8846282)
chr4 (86-239)||(5667198-5667354)
chr4 (87-240)||(47388059-47388215)
chr4 (181-243)||(26964590-26964652)
chr4 (69-162)||(35224461-35224555)
chr4 (93-148)||(10676770-10676826)
chr4 (93-148)||(10890410-10890466)
chr4 (73-109)||(47388230-47388266)
chr4 (69-109)||(10676842-10676882)
chr4 (69-109)||(10890482-10890522)
[»] scaffold0234 (2 HSPs)
scaffold0234 (69-243)||(10338-10514)
scaffold0234 (69-243)||(1445-1623)
[»] scaffold0061 (1 HSPs)
scaffold0061 (69-243)||(5322-5498)
[»] chr6 (12 HSPs)
chr6 (69-243)||(17690566-17690742)
chr6 (69-243)||(27297564-27297740)
chr6 (69-243)||(27380353-27380529)
chr6 (69-243)||(27470736-27470912)
chr6 (69-243)||(29309795-29309971)
chr6 (69-243)||(29316754-29316930)
chr6 (69-241)||(25536292-25536466)
chr6 (69-239)||(11652603-11652775)
chr6 (69-241)||(17683585-17683760)
chr6 (83-165)||(16393660-16393743)
chr6 (69-126)||(16558717-16558774)
chr6 (69-109)||(16393754-16393794)
[»] chr3 (20 HSPs)
chr3 (69-243)||(10571692-10571868)
chr3 (69-243)||(15341345-15341521)
chr3 (69-243)||(15600010-15600186)
chr3 (69-243)||(15606555-15606731)
chr3 (69-243)||(10578458-10578634)
chr3 (69-243)||(15356712-15356888)
chr3 (69-243)||(17780244-17780420)
chr3 (69-243)||(19081545-19081721)
chr3 (69-243)||(16481584-16481759)
chr3 (69-241)||(17196876-17197050)
chr3 (69-243)||(32056171-32056347)
chr3 (69-241)||(1646624-1646798)
chr3 (69-241)||(13517714-13517888)
chr3 (69-243)||(6110994-6111181)
chr3 (69-243)||(18537900-18538076)
chr3 (69-215)||(17137283-17137432)
chr3 (69-166)||(13212233-13212330)
chr3 (83-230)||(16201136-16201288)
chr3 (69-233)||(23014478-23014645)
chr3 (193-243)||(13212331-13212381)
[»] chr1 (10 HSPs)
chr1 (69-243)||(18252935-18253111)
chr1 (69-243)||(18531639-18531816)
chr1 (69-243)||(27130510-27130686)
chr1 (69-241)||(27309681-27309854)
chr1 (72-241)||(16358163-16358334)
chr1 (69-233)||(9076013-9076179)
chr1 (87-217)||(36815749-36815882)
chr1 (83-165)||(22641052-22641135)
chr1 (182-215)||(27276691-27276724)
chr1 (123-163)||(25662053-25662093)
[»] scaffold0433 (1 HSPs)
scaffold0433 (69-243)||(8013-8189)
[»] chr8 (8 HSPs)
chr8 (69-243)||(6095051-6095227)
chr8 (69-243)||(22172390-22172566)
chr8 (69-243)||(21941570-21941748)
chr8 (69-241)||(15327128-15327302)
chr8 (69-241)||(15507497-15507671)
chr8 (69-243)||(28548952-28549129)
chr8 (83-243)||(29230335-29230495)
chr8 (79-165)||(24643537-24643624)
[»] chr5 (6 HSPs)
chr5 (69-243)||(24694586-24694760)
chr5 (69-243)||(24701350-24701524)
chr5 (69-243)||(19706298-19706474)
chr5 (69-243)||(19713626-19713800)
chr5 (69-239)||(18565590-18565768)
chr5 (126-163)||(39539549-39539586)
[»] scaffold0390 (2 HSPs)
scaffold0390 (69-243)||(6035-6211)
scaffold0390 (69-243)||(13051-13227)
[»] chr2 (4 HSPs)
chr2 (69-231)||(21329380-21329546)
chr2 (69-225)||(22790977-22791135)
chr2 (83-162)||(27353286-27353366)
chr2 (183-242)||(41664787-41664846)
[»] scaffold0220 (1 HSPs)
scaffold0220 (71-231)||(19219-19382)
[»] scaffold1199 (1 HSPs)
scaffold1199 (69-243)||(25-206)
[»] scaffold0008 (1 HSPs)
scaffold0008 (69-241)||(229515-229693)
[»] scaffold0063 (1 HSPs)
scaffold0063 (70-241)||(6428-6607)
[»] scaffold0032 (1 HSPs)
scaffold0032 (122-243)||(107373-107497)
[»] scaffold1303 (1 HSPs)
scaffold1303 (69-155)||(1180-1267)


Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 11535364 - 11535188
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11535364 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 11535265  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  11535264 aactttttgttagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctctaaaccttgttctctct 11535188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 11542282 - 11542106
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11542282 agagaaacgcggtccaccgtaaggtacggtgtatttaagcgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 11542183  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  11542182 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaaccttgttctctct 11542106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 29328689 - 29328869
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctat----aaatagaacacttgtgttgaaacat 164  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    ||||||||| ||||||||||| |||    
T  29328689 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaaaatagaacccttgtgttgaagcat 29328788  T
Q  165 tactaactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  29328789 tactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 29328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18561938 - 18562114
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||||| || | |||||||| |||||||||||||||| |||||||||||  ||||||    
T  18561938 agagaaacgcggtccaccgtaaagtacggtgtatctaagtgttgtcttgctgactacacaagtaattctataaatagaacccttgtgttgaagtattact 18562037  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  18562038 aactttttgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 18562114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 12739447 - 12739623
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||  |||| ||| | |||||||    
T  12739447 agagaaacgcggtctatcgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgttttgtagcattact 12739546  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||    
T  12739547 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctct 12739623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 12751764 - 12751940
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| ||||  |||||||||| |||||||    
T  12751764 agagaaacgcagtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatggaaccattgtgttgaagcattact 12751863  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||| ||| ||||||||||||||||| ||||| ||||||| |||||||| ||||||||    
T  12751864 aactttttgtgagtgcttaacctcatttacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctct 12751940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 15153373 - 15153536
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||     
T  15153373 agagaaacgcggtccaccgtaaggtacggtgtgtttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattaca 15153472  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||||||  |||||||| ||||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  15153473 aactttttgtgagtgctaaacctcattcacaaaagttgtgaaa-cctagccgccgctctctaaac 15153536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 24850861 - 24850719
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||| ||||||| ||||||     
T  24850861 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtgattctataaatagaacccttatgttgaagcattacg 24850762  T
Q  169 aacttttt--gagtgcttaacctaattcacaaaagttgtgaaa 209  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  24850761 aactttttgggagtgcttaacctaattcacaaaagttgtgaaa 24850719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 11557369 - 11557199
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||| || |       
T  11557369 agagaaacgcagtccaccgtaaggtacgttgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttatgttgaagcact--- 11557273  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
       ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  11557272 ---ttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 11557199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 13393080 - 13393220
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttt--tgag 179  Q
    |||||||||||||  |||| ||||||| |||  ||| || ||||||||||||||||||||||||||| |||||| |||||||||||  | ||||  |||     
T  13393080 caccgtaaggtacgatgtacttaagtgcttggtttgctgaccacacaagtgattctataaatagaacccttgtgctgaaacattacatagtttttgtgaa 13393179  T
Q  180 tgcttaacctaattcacaaaagttgtgaaaccctagccacc 220  Q
      |||||||||||| ||||||||||||||||||||||||||    
T  13393180 cacttaacctaatttacaaaagttgtgaaaccctagccacc 13393220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 2653181 - 2653114
Alignment:
Q  176 tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  2653181 tgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 2653114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 9978842 - 9978909
Alignment:
Q  176 tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  9978842 tgagtgcttaacctaattcgcaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 9978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 9978775 - 9978832
Alignment:
Q  97 gtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgt 154  Q
    ||||| ||||||||||||||| || |||||| | |||||||||||||||||| |||||    
T  9978775 gtgtacttaagtgttgtcttgctgaccacacgattgattctataaatagaacccttgt 9978832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 13393029 - 13393069
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  13393029 agagaaatgcggtccaccgtaaggtacaatgtgtttaagtg 13393069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18263117 - 18263293
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  18263117 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacatgact 18263216  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  18263217 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18263293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 8859097 - 8859273
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  8859097 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 8859196  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  8859197 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 8859273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18269978 - 18270154
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  18269978 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacatgact 18270077  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  18270078 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18270154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 26971374 - 26971546
Alignment:
Q  73 aaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaact 172  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26971374 aaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattactaact 26971473  T
Q  173 ttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  26971474 ttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 26971546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 28392444 - 28392268
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  28392444 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 28392345  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28392344 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctttaaaccttcttctctct 28392268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 5714877 - 5715042
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5714877 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 5714976  T
Q  169 aac---tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||   || ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  5714977 aaccttttgttgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac 5715042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 869526 - 869690
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  869526 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 869625  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  869626 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac 869690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 5708242 - 5708406
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5708242 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 5708341  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  5708342 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgctgctctctaaac 5708406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19919808 - 19919632
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19919808 agagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 19919709  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    | |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19919708 acctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19926037 - 19925861
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19926037 agagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 19925938  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    | |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19925937 acctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19925861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 4425917 - 4425743
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4425917 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 4425818  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  4425817 aactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 4425743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10620610 - 10620434
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10620610 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 10620511  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||    
T  10620510 gactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctct 10620434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10627692 - 10627516
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10627692 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 10627593  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||    
T  10627592 gactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctct 10627516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 55613614 - 55613789
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  55613614 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 55613713  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| ||||||||    
T  55613714 tactttttgtgagtgcttaacctaattcacaaaagttgtgaaactc-agccgccgctctctaaaccttgttctctct 55613789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 8846108 - 8846282
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  8846108 agagaaacgcggtccaacgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtattgaagcattact 8846207  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  8846208 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctct 8846282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 5667354 - 5667198
Alignment:
Q  86 cgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg--agtgc 182  Q
    |||||||||| ||||| ||||||| ||| |||| || ||||||||||||||||||||||||||| |||||| |||| ||||||  | ||||||  |||||    
T  5667354 cgtaaggtacggtgtacttaagtgcttggcttgctgaccacacaagtgattctataaatagaacccttgtgctgaagcattacatattttttgtgagtgc 5667255  T
Q  183 ttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttct 239  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  5667254 ttaaccttattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttct 5667198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 47388215 - 47388059
Alignment:
Q  87 gtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttt--tgagtgct 183  Q
    ||||||||| ||||| ||||||| ||| |||| |  ||||||||||||||  |||||||||||  ||||| |||||||||||| ||||||  ||||||||    
T  47388215 gtaaggtacggtgtacttaagtgcttggcttgctcaccacacaagtgatttgataaatagaaccattgtgctgaaacattactgacttttgttgagtgct 47388116  T
Q  184 taacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctc 240  Q
    ||||||||||||||||||  |||||||||||||| || |||| |||||||| |||||    
T  47388115 taacctaattcacaaaaggcgtgaaaccctagccgccactctctaaacctttttctc 47388059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 26964590 - 26964652
Alignment:
Q  181 gcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  26964590 gcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 26964652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 35224461 - 35224555
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaac 162  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||| |||  ||  |||||||||| ||||||||||||||| |||||| ||||||    
T  35224461 agagaaacgcggtccaccgtaaggtacggtgtacttaagtgcttgactttatgagcacacaagtggttctataaatagaacccttgtgctgaaac 35224555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 10676826 - 10676770
Alignment:
Q  93 tacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaac 148  Q
    |||| |||||||||||| ||| ||||||| ||||||||||| |||||||||||||||    
T  10676826 tacaatgtatttaagtgcttggcttgttgaccacacaagtggttctataaatagaac 10676770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 10890466 - 10890410
Alignment:
Q  93 tacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaac 148  Q
    |||| |||||||||||| ||| ||||||| ||||||||||| |||||||||||||||    
T  10890466 tacaatgtatttaagtgcttggcttgttgaccacacaagtggttctataaatagaac 10890410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 47388266 - 47388230
Alignment:
Q  73 aaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    |||||||||||||||||||||||||||| ||||||||    
T  47388266 aaacgcggtccaccgtaaggtacagtgtgtttaagtg 47388230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 10676882 - 10676842
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  10676882 agagaaatgcggtccaccgtaaggtacaatgtgtttaagtg 10676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 10890522 - 10890482
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  10890522 agagaaatgcggtccaccgtaaggtacaatgtgtttaagtg 10890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10514 - 10338
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  10514 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacatgact 10415  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10414 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 1623 - 1445
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctat--aaatagaacacttgtgttgaaacatta 166  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| |    
T  1623 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaatagaacccttgtgttgaaacatga 1524  T
Q  167 ctaactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  1523 ctaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 1445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 5498 - 5322
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5498 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 5399  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  5398 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 5322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 17690742 - 17690566
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17690742 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 17690643  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  17690642 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 17690566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 27297564 - 27297740
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27297564 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 27297663  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  27297664 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 27297740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 27380529 - 27380353
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  27380529 agagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattatt 27380430  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  27380429 aacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 27380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 27470912 - 27470736
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  27470912 agagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattatt 27470813  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  27470812 aacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 27470736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 29309795 - 29309971
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  29309795 agagaaatgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 29309894  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||    
T  29309895 aacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctct 29309971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 29316754 - 29316930
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||| ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  29316754 agagaaatgcgattcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 29316853  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||    
T  29316854 aacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctct 29316930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 25536466 - 25536292
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||| ||||||||||| |||||||    
T  25536466 agagaaacgcgatcgaccgtaaggtacagtgtatttaagtgttgtctttctgatcacacaagtgattctataaatagaacccttgtgttgaagcattact 25536367  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||    
T  25536366 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaacccaagccgccgctctctaaaccttgttctct 25536292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 11652603 - 11652775
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11652603 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 11652702  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttct 239  Q
    || ||||  ||| |||| |||||||||||||||||||||||||||||||   ||||||| |||||||||||||    
T  11652703 aattttttgtgaatgctgaacctaattcacaaaagttgtgaaaccctagatgccgctctctaaaccttcttct 11652775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 17683760 - 17683585
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17683760 agagaaacgcagtccaccgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 17683661  T
Q  169 aac---tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||   ||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||||||    
T  17683660 aacctttttgtgagtgcttaacttaattcacaaaagttgtgaaaccctagtcaccgctctctaaacattgttctct 17683585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 16393743 - 16393660
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatt 165  Q
    ||||||||||||| ||||||||||||| ||| |||| || | ||||||||| |||||||||||||||||||||| |||||||||    
T  16393743 caccgtaaggtacggtgtatttaagtgattgacttgatgacgacacaagtggttctataaatagaacacttgtgctgaaacatt 16393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 16558774 - 16558717
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccaca 126  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||| || |||||    
T  16558774 agagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgctgaccaca 16558717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 16393794 - 16393754
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    |||||||| |||||||||||||||||| |||| ||||||||    
T  16393794 agagaaacacggtccaccgtaaggtacggtgtgtttaagtg 16393754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10571868 - 10571692
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10571868 agagaaacgcggttcaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 10571769  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10571768 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10571692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15341521 - 15341345
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  15341521 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 15341422  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15341421 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15341345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15600186 - 15600010
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15600186 agagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 15600087  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15600086 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15606731 - 15606555
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15606731 agagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 15606632  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15606631 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15606555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10578634 - 10578458
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10578634 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 10578535  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10578534 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10578458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15356888 - 15356712
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  15356888 agagaaacgcggtccaccgtaaggtacggtgtatttaattgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 15356789  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15356788 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15356712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 17780420 - 17780244
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17780420 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 17780321  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  17780320 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 17780244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19081721 - 19081545
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19081721 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 19081622  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  19081621 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 19081545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 16481759 - 16481584
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16481759 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 16481660  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| ||||||||    
T  16481659 tactttttgtgagtgcttaacctaattcacaaaagttgtgaaactc-agccgccgctctctaaaccttgttctctct 16481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 17197050 - 17196876
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  17197050 agagaaacgcggtccaccgtaaggtactgtgtatttaagtgttgtcttgctgaccagacaagtgattctataaatagaacccttgtgttgaagcattact 17196951  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||||   ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  17196950 aactttttgtttgtgcttaacttaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 17196876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 32056347 - 32056171
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||| || |||||||    
T  32056347 agagaaacgcagtccactgtaaggtacagtgtatttaagtgttgtcttgctgatcacacaagtgattctataaatagaacccttgtgttcaagcattact 32056248  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  ||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||    
T  32056247 aactttttgtgattgcttaacctaattcacaaaagttgtgaagccctagccgccgctctctaaaccttgttctctct 32056171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 1646798 - 1646624
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  1646798 agagaaacgcggtccaccgtaaggtacggtgcatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 1646699  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    || ||||  |||||||||||||||||| ||||||||||||||||||||| |  |||||| |||||||| ||||||    
T  1646698 aattttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagtcgtcgctctctaaaccttgttctct 1646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 13517714 - 13517888
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||  ||||||||||||||| ||||||||||| ||| |||    
T  13517714 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtatttctataaatagaacccttgtgttgaagcatgact 13517813  T
Q  169 aactt--tttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||  | |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  13517814 aacttaatgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacattgttctct 13517888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 6110994 - 6111181
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattac- 167  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||     
T  6110994 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattacc 6111093  T
Q  168 ----------taactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
               |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  6111094 aaaaaaaaaaaaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 6111181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18537900 - 18538076
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| || || |||||||||||||||||||||||| |||||| |||| |||||      
T  18537900 agagaaacgcggttcaccgtaaggtacagtgtagttaagtgttgtcttgctgaccgcacaagtgattctataaatagaactcttgtgctgaagcattatg 18537999  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||  ||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||  |||||||    
T  18538000 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttggtctctct 18538076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 17137283 - 17137432
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacac-aagtgattctataaatagaacacttgtgttgaaacattac 167  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||| |||||||||||| ||||||||||| ||||||    
T  17137283 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaaagtgattttataaatagaacccttgtgttgaagcattac 17137382  T
Q  168 taactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctag 215  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| ||||    
T  17137383 taactttttgtgagtgcttaacctaattaacaaaagttgtgaaacactag 17137432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 13212233 - 13212330
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatta 166  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  13212233 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgttcacacaagtgattctataaatagaacccttgtgttgaagcatta 13212330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 16201136 - 16201288
Alignment:
Q  83 caccgtaaggtacagtgta-tttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttt--tga 178  Q
    ||||||| ||||| ||||| |||||||| ||| |||  || |||||||||||||||||||||| |||| |||||| ||||  ||||   ||||||  |||    
T  16201136 caccgtatggtacggtgtactttaagtgcttgacttactgaccacacaagtgattctataaattgaacccttgtgctgaagtattatagacttttgttga 16201235  T
Q  179 -gtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaa 230  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  16201236 agtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaa 16201288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 23014645 - 23014478
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||| || ||||||||   |||||||||||| |   ||| || ||||||||||| ||||||||||||||| |||||| |||| ||||| |    
T  23014645 agagaaacgcagtctactgtaaggtatgatgtatttaagtggttggttgctgaccacacaagtggttctataaatagaacccttgtgctgaagcattagt 23014546  T
Q  169 aactttttgagtg-----cttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaacct 233  Q
    |||||||||  ||     |||||||||||||  |||||||  |||||||||||| ||||||| |||||||    
T  23014545 aactttttggttgaaacacttaacctaattc-taaaagtt-agaaaccctagccgccgctctctaaacct 23014478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 13212331 - 13212381
Alignment:
Q  193 tcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  13212331 tcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 13212381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18252935 - 18253111
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  18252935 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 18253034  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  18253035 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18253111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 18531816 - 18531639
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||     
T  18531816 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattacg 18531717  T
Q  169 aac---tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||   ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  18531716 aacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 18531639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 27130686 - 27130510
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27130686 agagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 27130587  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  27130586 aactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagcctccgctctctaaaccttgttctctct 27130510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 27309854 - 27309681
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27309854 agagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctaaccacacaagtgattctataaatagaac-cttgtgttgaagcattact 27309756  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  27309755 aactttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 27309681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 72 - 241
Target Start/End: Complemental strand, 16358334 - 16358163
Alignment:
Q  72 gaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaac 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  16358334 gaaacgcggtccaccgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaaatgattctataaatagaacccttgtgttgaagcattactaac 16358235  T
Q  172 tttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    ||||  |||||||||||||||||||||||||||||||||||| ||||   |||||| ||||| || ||||||    
T  16358234 tttttgtgagtgcttaacctaattcacaaaagttgtgaaaccatagctgtcgctctctaaacgttgttctct 16358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 9076179 - 9076013
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||| || ||||||||  ||||||||||||||||| ||||||||||| |||||||    
T  9076179 agagaaacgcgatccaccgtaaggtatgctgtatttaagtgttgtcttgctgaccacacaaacgattctataaatagaacccttgtgttgaagcattact 9076080  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaacct 233  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  9076079 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacct 9076013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 36815882 - 36815749
Alignment:
Q  87 gtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg--agtgct 183  Q
    ||||||||| ||||| | ||||| ||| |||| || ||||||||||||||||||||||||||| ||||||||||| ||| ||  |||| |||  ||||||    
T  36815882 gtaaggtacggtgtactaaagtgcttggcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatgacagacttcttgtgagtgct 36815783  T
Q  184 taacctaattcacaaaagttgtgaaaccctagcc 217  Q
    ||||||||||||||||||||||||||||||||||    
T  36815782 taacctaattcacaaaagttgtgaaaccctagcc 36815749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 22641135 - 22641052
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatt 165  Q
    ||||||||||||  ||||||||||||| ||| || | || | |||||| || |||||||||||||||||||||| |||||||||    
T  22641135 caccgtaaggtatggtgtatttaagtggttgactagatgacgacacaattggttctataaatagaacacttgtgctgaaacatt 22641052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 27276724 - 27276691
Alignment:
Q  182 cttaacctaattcacaaaagttgtgaaaccctag 215  Q
    ||||||||||||||||||||||||||||||||||    
T  27276724 cttaacctaattcacaaaagttgtgaaaccctag 27276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 25662053 - 25662093
Alignment:
Q  123 cacacaagtgattctataaatagaacacttgtgttgaaaca 163  Q
    |||||||||| || |||||||||||| ||||||||||||||    
T  25662053 cacacaagtggttttataaatagaacccttgtgttgaaaca 25662093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 8013 - 8189
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8013 agagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 8112  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  8113 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 8189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 6095051 - 6095227
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  6095051 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 6095150  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  6095151 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 6095227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 22172390 - 22172566
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  22172390 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 22172489  T
Q  169 aa-ctttt-tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  22172490 aatcttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 22172566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 21941570 - 21941748
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21941570 agagaaacgcggttcaccgtaaggtacgatgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 21941669  T
Q  169 aac----tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||    ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  21941670 aaccctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 21941748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 15327128 - 15327302
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||| |||||||    
T  15327128 agagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgtgttgaagcattact 15327227  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||| ||||||    
T  15327228 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctct 15327302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 15507497 - 15507671
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||| |||||||    
T  15507497 agagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgtgttgaagcattact 15507596  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||| ||||||    
T  15507597 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctct 15507671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 28548952 - 28549129
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| || | ||| ||||||||||||||||||||| ||||||||||| ||| |||    
T  28548952 agagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctgactacataagtgattctataaatagaacccttgtgttgaagcatgact 28549051  T
Q  169 aac--tttttgagtgcttaacctaattcac-aaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||  ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||    
T  28549052 aacattttgtgagtgcttaacctaattcacaaaaagttgtgaaaccctagccgccgctctctaaacctggttctctct 28549129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 29230335 - 29230495
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg---a 178  Q
    |||||||||||| |||||| ||||||| |||  ||| || |||||||||||||||||||||||||||    ||| |||| ||||||| ||||||     |    
T  29230335 caccgtaaggtaaagtgtacttaagtgcttggtttgctgaccacacaagtgattctataaatagaac----gtgatgaagcattactgacttttgttaaa 29230430  T
Q  179 gtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  29230431 gtgcttaacctaactaacaaaagttgtgaaaccctagccgccgctccttaaaccttgttctctct 29230495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 24643537 - 24643624
Alignment:
Q  79 ggtccaccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatt 165  Q
    |||||||||||| |||| ||||||||||||| ||| |||||||  |||||||||| ||||||||||||||| ||| || |||| ||||    
T  24643537 ggtccaccgtaaagtacggtgtatttaagtgattggcttgttgatcacacaagtggttctataaatagaacccttatgctgaagcatt 24643624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 24694760 - 24694586
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  24694760 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatagaacccttgtgttgaagcattact 24694661  T
Q  169 aactttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||  ||||||||    
T  24694660 aactttttgggtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctct 24694586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 24701524 - 24701350
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  24701524 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatagaacccttgtgttgaagcattact 24701425  T
Q  169 aactttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||  ||||||||    
T  24701424 aactttttgggtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctct 24701350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19706474 - 19706298
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||| |||    
T  19706474 agagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttatgttgaagcataact 19706375  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19706374 aacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19706298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19713800 - 19713626
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  19713800 agagaaacgcggtccaccgtaaggtacagtatatttaagtgttgtcttgca--ccacacaagtgattctataaatagaacccttgtgttgaagcataact 19713703  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  19713702 aacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaacctttttctctct 19713626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 18565768 - 18565590
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacac-----ttgtgttgaaaca 163  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||| |     |||||||||| ||    
T  18565768 agagaaacgcggtccactgtaaggcacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgtgttgaagca 18565669  T
Q  164 ttactaactttt---tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttct 239  Q
    |||| |||||||   |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||    
T  18565668 ttacaaacttttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccggtctctaaaccttgttct 18565590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 39539549 - 39539586
Alignment:
Q  126 acaagtgattctataaatagaacacttgtgttgaaaca 163  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  39539549 acaagtggttctataaatagaacccttgtgttgaaaca 39539586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 6211 - 6035
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  6211 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccatacaagtgattctataaatagaacccttgtgttgaagcattact 6112  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  6111 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 13227 - 13051
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  13227 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 13128  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||    
T  13127 aactttttgtgagtgcttaacctaattcacaacagttgtgaaaccctagccgccgctctctaaaccttgttctctct 13051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 231
Target Start/End: Complemental strand, 21329546 - 21329380
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctat--aaatagaacacttgtgttgaaacatta 166  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  21329546 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaatagaacccttgtgttgaaacatta 21329447  T
Q  167 ctaactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21329446 ctaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac 21329380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 225
Target Start/End: Complemental strand, 22791135 - 22790977
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  22791135 agagaaacgcagtccactgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgttttgtagcattact 22791036  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctct 225  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22791035 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctct 22790977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 27353286 - 27353366
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaac 162  Q
    ||||||||||||| ||||| ||||||| ||| |||| || ||||||||| | |||||||||||||||||||||| ||||||    
T  27353286 caccgtaaggtacggtgtaattaagtgattgacttgatgaccacacaaggggttctataaatagaacacttgtgctgaaac 27353366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 41664787 - 41664846
Alignment:
Q  183 ttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctc 242  Q
    |||||||||||||||||||||||||||||||||||  || ||| |||||||| |||||||    
T  41664787 ttaacctaattcacaaaagttgtgaaaccctagccgtcgttctctaaaccttgttctctc 41664846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 19219 - 19382
Alignment:
Q  71 agaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaa 170  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19219 agaaacgcggtccactggaaggtacggtgtatttaagtgttgtcttgttgcccacacaagtgattctataaatagaacccttgtgttgaaacattactaa 19318  T
Q  171 ctttttg---agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||||||   |||||||||||||||||||||||||||||||||||||||| || |||| |||||    
T  19319 ctttttgtgaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccactctctaaac 19382  T

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Target: scaffold1199 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 25 - 206
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||| |||||      
T  25 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagttattctataaatagaacccttgtgttgaagcattatg 124  T
Q  169 aactttt-------tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||       |||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||    
T  125 aactttttgaaaagtgagtgcttaacctaattcacaaaagttgtgaaaccatagccgccgctatctaaaccttgttctctct 206  T

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Target: scaffold0008 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 229693 - 229515
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||| | ||||||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||| ||| ||||||| ||| ||     
T  229693 agagaaatgtggtccaccgtaaggtacggtgtatttaagtgttttcttgctgaccacacaagtgattctataaatagaacccttctgttgaagcatgacg 229594  T
Q  169 aac------tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||      ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  229593 aacttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgttctct 229515  T

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Target: scaffold0063 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 6428 - 6607
Alignment:
Q  70 gagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattacta 169  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| || |    
T  6428 gagaaactcggtccaccgtaaagtatggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatgacga 6527  T
Q  170 ac--------tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    ||        ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  6528 acttttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgttctct 6607  T

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Target: scaffold0032 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 107497 - 107373
Alignment:
Q  122 ccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg---agtgcttaacctaattcacaaaagttgtgaaaccctagcca 218  Q
    ||||||||||| |||| |||||||||| |||||| |||| ||||||||| ||||||   |   |||||  |||||||||||||||||||||||||||||     
T  107497 ccacacaagtggttctgtaaatagaacccttgtgctgaagcattactaagtttttgttgaacacttaagataattcacaaaagttgtgaaaccctagccg 107398  T
Q  219 ccgctctttaaaccttcttctctct 243  Q
    || ||||||||| ||| ||||||||    
T  107397 ccactctttaaatcttgttctctct 107373  T

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Target: scaffold1303 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 1267 - 1180
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtg 155  Q
    ||||||| |||||||| |||||||||| |||| ||||| || ||| |||| || |||| |||||| ||||||||||||||||||||||    
T  1267 agagaaatgcggtccagcgtaaggtacggtgtgtttaattgattgacttgatgaccacgcaagtggttctataaatagaacacttgtg 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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