View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18458_low_10 (Length: 248)

Name: NF18458_low_10
Description: NF18458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18458_low_10
NF18458_low_10
[»] chr7 (14 HSPs)
chr7 (69-243)||(11535188-11535364)
chr7 (69-243)||(11542106-11542282)
chr7 (69-243)||(29328689-29328869)
chr7 (69-243)||(18561938-18562114)
chr7 (69-243)||(12739447-12739623)
chr7 (69-243)||(12751764-12751940)
chr7 (69-231)||(15153373-15153536)
chr7 (69-209)||(24850719-24850861)
chr7 (69-243)||(11557199-11557369)
chr7 (83-220)||(13393080-13393220)
chr7 (176-243)||(2653114-2653181)
chr7 (176-243)||(9978842-9978909)
chr7 (97-154)||(9978775-9978832)
chr7 (69-109)||(13393029-13393069)
[»] chr4 (24 HSPs)
chr4 (69-243)||(18263117-18263293)
chr4 (69-243)||(8859097-8859273)
chr4 (69-243)||(18269978-18270154)
chr4 (73-243)||(26971374-26971546)
chr4 (69-243)||(28392268-28392444)
chr4 (69-231)||(5714877-5715042)
chr4 (69-231)||(869526-869690)
chr4 (69-231)||(5708242-5708406)
chr4 (69-243)||(19919632-19919808)
chr4 (69-243)||(19925861-19926037)
chr4 (69-241)||(4425743-4425917)
chr4 (69-243)||(10620434-10620610)
chr4 (69-243)||(10627516-10627692)
chr4 (69-243)||(55613614-55613789)
chr4 (69-241)||(8846108-8846282)
chr4 (86-239)||(5667198-5667354)
chr4 (87-240)||(47388059-47388215)
chr4 (181-243)||(26964590-26964652)
chr4 (69-162)||(35224461-35224555)
chr4 (93-148)||(10676770-10676826)
chr4 (93-148)||(10890410-10890466)
chr4 (73-109)||(47388230-47388266)
chr4 (69-109)||(10676842-10676882)
chr4 (69-109)||(10890482-10890522)
[»] scaffold0234 (2 HSPs)
scaffold0234 (69-243)||(10338-10514)
scaffold0234 (69-243)||(1445-1623)
[»] scaffold0061 (1 HSPs)
scaffold0061 (69-243)||(5322-5498)
[»] chr6 (12 HSPs)
chr6 (69-243)||(17690566-17690742)
chr6 (69-243)||(27297564-27297740)
chr6 (69-243)||(27380353-27380529)
chr6 (69-243)||(27470736-27470912)
chr6 (69-243)||(29309795-29309971)
chr6 (69-243)||(29316754-29316930)
chr6 (69-241)||(25536292-25536466)
chr6 (69-239)||(11652603-11652775)
chr6 (69-241)||(17683585-17683760)
chr6 (83-165)||(16393660-16393743)
chr6 (69-126)||(16558717-16558774)
chr6 (69-109)||(16393754-16393794)
[»] chr3 (20 HSPs)
chr3 (69-243)||(10571692-10571868)
chr3 (69-243)||(15341345-15341521)
chr3 (69-243)||(15600010-15600186)
chr3 (69-243)||(15606555-15606731)
chr3 (69-243)||(10578458-10578634)
chr3 (69-243)||(15356712-15356888)
chr3 (69-243)||(17780244-17780420)
chr3 (69-243)||(19081545-19081721)
chr3 (69-243)||(16481584-16481759)
chr3 (69-241)||(17196876-17197050)
chr3 (69-243)||(32056171-32056347)
chr3 (69-241)||(1646624-1646798)
chr3 (69-241)||(13517714-13517888)
chr3 (69-243)||(6110994-6111181)
chr3 (69-243)||(18537900-18538076)
chr3 (69-215)||(17137283-17137432)
chr3 (69-166)||(13212233-13212330)
chr3 (83-230)||(16201136-16201288)
chr3 (69-233)||(23014478-23014645)
chr3 (193-243)||(13212331-13212381)
[»] chr1 (10 HSPs)
chr1 (69-243)||(18252935-18253111)
chr1 (69-243)||(18531639-18531816)
chr1 (69-243)||(27130510-27130686)
chr1 (69-241)||(27309681-27309854)
chr1 (72-241)||(16358163-16358334)
chr1 (69-233)||(9076013-9076179)
chr1 (87-217)||(36815749-36815882)
chr1 (83-165)||(22641052-22641135)
chr1 (182-215)||(27276691-27276724)
chr1 (123-163)||(25662053-25662093)
[»] scaffold0433 (1 HSPs)
scaffold0433 (69-243)||(8013-8189)
[»] chr8 (8 HSPs)
chr8 (69-243)||(6095051-6095227)
chr8 (69-243)||(22172390-22172566)
chr8 (69-243)||(21941570-21941748)
chr8 (69-241)||(15327128-15327302)
chr8 (69-241)||(15507497-15507671)
chr8 (69-243)||(28548952-28549129)
chr8 (83-243)||(29230335-29230495)
chr8 (79-165)||(24643537-24643624)
[»] chr5 (6 HSPs)
chr5 (69-243)||(24694586-24694760)
chr5 (69-243)||(24701350-24701524)
chr5 (69-243)||(19706298-19706474)
chr5 (69-243)||(19713626-19713800)
chr5 (69-239)||(18565590-18565768)
chr5 (126-163)||(39539549-39539586)
[»] scaffold0390 (2 HSPs)
scaffold0390 (69-243)||(6035-6211)
scaffold0390 (69-243)||(13051-13227)
[»] chr2 (4 HSPs)
chr2 (69-231)||(21329380-21329546)
chr2 (69-225)||(22790977-22791135)
chr2 (83-162)||(27353286-27353366)
chr2 (183-242)||(41664787-41664846)
[»] scaffold0220 (1 HSPs)
scaffold0220 (71-231)||(19219-19382)
[»] scaffold1199 (1 HSPs)
scaffold1199 (69-243)||(25-206)
[»] scaffold0008 (1 HSPs)
scaffold0008 (69-241)||(229515-229693)
[»] scaffold0063 (1 HSPs)
scaffold0063 (70-241)||(6428-6607)
[»] scaffold0032 (1 HSPs)
scaffold0032 (122-243)||(107373-107497)
[»] scaffold1303 (1 HSPs)
scaffold1303 (69-155)||(1180-1267)


Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 11535364 - 11535188
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11535364 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 11535265  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  11535264 aactttttgttagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctctaaaccttgttctctct 11535188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 11542282 - 11542106
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11542282 agagaaacgcggtccaccgtaaggtacggtgtatttaagcgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 11542183  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  11542182 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaaccttgttctctct 11542106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 29328689 - 29328869
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctat----aaatagaacacttgtgttgaaacat 164  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    ||||||||| ||||||||||| |||    
T  29328689 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaaaatagaacccttgtgttgaagcat 29328788  T
Q  165 tactaactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  29328789 tactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 29328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18561938 - 18562114
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||||| || | |||||||| |||||||||||||||| |||||||||||  ||||||    
T  18561938 agagaaacgcggtccaccgtaaagtacggtgtatctaagtgttgtcttgctgactacacaagtaattctataaatagaacccttgtgttgaagtattact 18562037  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  18562038 aactttttgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 18562114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 12739447 - 12739623
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||  |||| ||| | |||||||    
T  12739447 agagaaacgcggtctatcgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgttttgtagcattact 12739546  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||    
T  12739547 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctct 12739623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 12751764 - 12751940
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| ||||  |||||||||| |||||||    
T  12751764 agagaaacgcagtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatggaaccattgtgttgaagcattact 12751863  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||| ||| ||||||||||||||||| ||||| ||||||| |||||||| ||||||||    
T  12751864 aactttttgtgagtgcttaacctcatttacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctct 12751940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 15153373 - 15153536
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||     
T  15153373 agagaaacgcggtccaccgtaaggtacggtgtgtttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattaca 15153472  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||||||  |||||||| ||||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  15153473 aactttttgtgagtgctaaacctcattcacaaaagttgtgaaa-cctagccgccgctctctaaac 15153536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 24850861 - 24850719
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||| ||||||| ||||||     
T  24850861 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtgattctataaatagaacccttatgttgaagcattacg 24850762  T
Q  169 aacttttt--gagtgcttaacctaattcacaaaagttgtgaaa 209  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  24850761 aactttttgggagtgcttaacctaattcacaaaagttgtgaaa 24850719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 11557369 - 11557199
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||| || |       
T  11557369 agagaaacgcagtccaccgtaaggtacgttgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttatgttgaagcact--- 11557273  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
       ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  11557272 ---ttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 11557199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 13393080 - 13393220
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttt--tgag 179  Q
    |||||||||||||  |||| ||||||| |||  ||| || ||||||||||||||||||||||||||| |||||| |||||||||||  | ||||  |||     
T  13393080 caccgtaaggtacgatgtacttaagtgcttggtttgctgaccacacaagtgattctataaatagaacccttgtgctgaaacattacatagtttttgtgaa 13393179  T
Q  180 tgcttaacctaattcacaaaagttgtgaaaccctagccacc 220  Q
      |||||||||||| ||||||||||||||||||||||||||    
T  13393180 cacttaacctaatttacaaaagttgtgaaaccctagccacc 13393220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 2653181 - 2653114
Alignment:
Q  176 tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  2653181 tgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 2653114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 9978842 - 9978909
Alignment:
Q  176 tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  9978842 tgagtgcttaacctaattcgcaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 9978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 9978775 - 9978832
Alignment:
Q  97 gtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgt 154  Q
    ||||| ||||||||||||||| || |||||| | |||||||||||||||||| |||||    
T  9978775 gtgtacttaagtgttgtcttgctgaccacacgattgattctataaatagaacccttgt 9978832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 13393029 - 13393069
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  13393029 agagaaatgcggtccaccgtaaggtacaatgtgtttaagtg 13393069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18263117 - 18263293
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  18263117 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacatgact 18263216  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  18263217 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18263293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 8859097 - 8859273
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  8859097 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 8859196  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  8859197 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 8859273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18269978 - 18270154
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  18269978 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacatgact 18270077  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  18270078 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18270154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 26971374 - 26971546
Alignment:
Q  73 aaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaact 172  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26971374 aaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattactaact 26971473  T
Q  173 ttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  26971474 ttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 26971546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 28392444 - 28392268
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  28392444 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 28392345  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28392344 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctttaaaccttcttctctct 28392268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 5714877 - 5715042
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5714877 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 5714976  T
Q  169 aac---tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||   || ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  5714977 aaccttttgttgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac 5715042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 869526 - 869690
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  869526 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 869625  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  869626 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac 869690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 5708242 - 5708406
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5708242 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 5708341  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  5708342 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgctgctctctaaac 5708406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19919808 - 19919632
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19919808 agagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 19919709  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    | |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19919708 acctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19926037 - 19925861
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19926037 agagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 19925938  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    | |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19925937 acctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19925861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 4425917 - 4425743
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4425917 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 4425818  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  4425817 aactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 4425743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10620610 - 10620434
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10620610 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 10620511  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||    
T  10620510 gactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctct 10620434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10627692 - 10627516
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10627692 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 10627593  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||    
T  10627592 gactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctct 10627516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 55613614 - 55613789
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  55613614 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 55613713  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| ||||||||    
T  55613714 tactttttgtgagtgcttaacctaattcacaaaagttgtgaaactc-agccgccgctctctaaaccttgttctctct 55613789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 8846108 - 8846282
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  8846108 agagaaacgcggtccaacgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtattgaagcattact 8846207  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  8846208 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctct 8846282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 5667354 - 5667198
Alignment:
Q  86 cgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg--agtgc 182  Q
    |||||||||| ||||| ||||||| ||| |||| || ||||||||||||||||||||||||||| |||||| |||| ||||||  | ||||||  |||||    
T  5667354 cgtaaggtacggtgtacttaagtgcttggcttgctgaccacacaagtgattctataaatagaacccttgtgctgaagcattacatattttttgtgagtgc 5667255  T
Q  183 ttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttct 239  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  5667254 ttaaccttattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttct 5667198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 47388215 - 47388059
Alignment:
Q  87 gtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttt--tgagtgct 183  Q
    ||||||||| ||||| ||||||| ||| |||| |  ||||||||||||||  |||||||||||  ||||| |||||||||||| ||||||  ||||||||    
T  47388215 gtaaggtacggtgtacttaagtgcttggcttgctcaccacacaagtgatttgataaatagaaccattgtgctgaaacattactgacttttgttgagtgct 47388116  T
Q  184 taacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctc 240  Q
    ||||||||||||||||||  |||||||||||||| || |||| |||||||| |||||    
T  47388115 taacctaattcacaaaaggcgtgaaaccctagccgccactctctaaacctttttctc 47388059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 26964590 - 26964652
Alignment:
Q  181 gcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  26964590 gcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 26964652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 35224461 - 35224555
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaac 162  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||| |||  ||  |||||||||| ||||||||||||||| |||||| ||||||    
T  35224461 agagaaacgcggtccaccgtaaggtacggtgtacttaagtgcttgactttatgagcacacaagtggttctataaatagaacccttgtgctgaaac 35224555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 10676826 - 10676770
Alignment:
Q  93 tacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaac 148  Q
    |||| |||||||||||| ||| ||||||| ||||||||||| |||||||||||||||    
T  10676826 tacaatgtatttaagtgcttggcttgttgaccacacaagtggttctataaatagaac 10676770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 10890466 - 10890410
Alignment:
Q  93 tacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaac 148  Q
    |||| |||||||||||| ||| ||||||| ||||||||||| |||||||||||||||    
T  10890466 tacaatgtatttaagtgcttggcttgttgaccacacaagtggttctataaatagaac 10890410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 47388266 - 47388230
Alignment:
Q  73 aaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    |||||||||||||||||||||||||||| ||||||||    
T  47388266 aaacgcggtccaccgtaaggtacagtgtgtttaagtg 47388230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 10676882 - 10676842
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  10676882 agagaaatgcggtccaccgtaaggtacaatgtgtttaagtg 10676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 10890522 - 10890482
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  10890522 agagaaatgcggtccaccgtaaggtacaatgtgtttaagtg 10890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10514 - 10338
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  10514 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacatgact 10415  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10414 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 1623 - 1445
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctat--aaatagaacacttgtgttgaaacatta 166  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| |    
T  1623 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaatagaacccttgtgttgaaacatga 1524  T
Q  167 ctaactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  1523 ctaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 1445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 5498 - 5322
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5498 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 5399  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  5398 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 5322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 17690742 - 17690566
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17690742 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 17690643  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  17690642 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 17690566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 27297564 - 27297740
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27297564 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 27297663  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  27297664 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 27297740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 27380529 - 27380353
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  27380529 agagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattatt 27380430  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  27380429 aacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 27380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 27470912 - 27470736
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  27470912 agagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattatt 27470813  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  27470812 aacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 27470736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 29309795 - 29309971
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  29309795 agagaaatgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 29309894  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||    
T  29309895 aacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctct 29309971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 29316754 - 29316930
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||| ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  29316754 agagaaatgcgattcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 29316853  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||    
T  29316854 aacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctct 29316930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 25536466 - 25536292
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||| ||||||||||| |||||||    
T  25536466 agagaaacgcgatcgaccgtaaggtacagtgtatttaagtgttgtctttctgatcacacaagtgattctataaatagaacccttgtgttgaagcattact 25536367  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||    
T  25536366 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaacccaagccgccgctctctaaaccttgttctct 25536292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 11652603 - 11652775
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11652603 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 11652702  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttct 239  Q
    || ||||  ||| |||| |||||||||||||||||||||||||||||||   ||||||| |||||||||||||    
T  11652703 aattttttgtgaatgctgaacctaattcacaaaagttgtgaaaccctagatgccgctctctaaaccttcttct 11652775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 17683760 - 17683585
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17683760 agagaaacgcagtccaccgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 17683661  T
Q  169 aac---tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||   ||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||||||    
T  17683660 aacctttttgtgagtgcttaacttaattcacaaaagttgtgaaaccctagtcaccgctctctaaacattgttctct 17683585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 16393743 - 16393660
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatt 165  Q
    ||||||||||||| ||||||||||||| ||| |||| || | ||||||||| |||||||||||||||||||||| |||||||||    
T  16393743 caccgtaaggtacggtgtatttaagtgattgacttgatgacgacacaagtggttctataaatagaacacttgtgctgaaacatt 16393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 16558774 - 16558717
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccaca 126  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||| || |||||    
T  16558774 agagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgctgaccaca 16558717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 16393794 - 16393754
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg 109  Q
    |||||||| |||||||||||||||||| |||| ||||||||    
T  16393794 agagaaacacggtccaccgtaaggtacggtgtgtttaagtg 16393754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10571868 - 10571692
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10571868 agagaaacgcggttcaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 10571769  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10571768 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10571692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15341521 - 15341345
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  15341521 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 15341422  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15341421 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15341345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15600186 - 15600010
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15600186 agagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 15600087  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15600086 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15606731 - 15606555
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15606731 agagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 15606632  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15606631 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15606555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 10578634 - 10578458
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10578634 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 10578535  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10578534 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10578458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 15356888 - 15356712
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  15356888 agagaaacgcggtccaccgtaaggtacggtgtatttaattgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 15356789  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  15356788 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15356712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 17780420 - 17780244
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17780420 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 17780321  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  17780320 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 17780244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19081721 - 19081545
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19081721 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 19081622  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  19081621 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 19081545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 16481759 - 16481584
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16481759 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 16481660  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
     ||||||  ||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| ||||||||    
T  16481659 tactttttgtgagtgcttaacctaattcacaaaagttgtgaaactc-agccgccgctctctaaaccttgttctctct 16481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 17197050 - 17196876
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  17197050 agagaaacgcggtccaccgtaaggtactgtgtatttaagtgttgtcttgctgaccagacaagtgattctataaatagaacccttgtgttgaagcattact 17196951  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||||   ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  17196950 aactttttgtttgtgcttaacttaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 17196876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 32056347 - 32056171
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||| || |||||||    
T  32056347 agagaaacgcagtccactgtaaggtacagtgtatttaagtgttgtcttgctgatcacacaagtgattctataaatagaacccttgtgttcaagcattact 32056248  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  ||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||    
T  32056247 aactttttgtgattgcttaacctaattcacaaaagttgtgaagccctagccgccgctctctaaaccttgttctctct 32056171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 1646798 - 1646624
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  1646798 agagaaacgcggtccaccgtaaggtacggtgcatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 1646699  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    || ||||  |||||||||||||||||| ||||||||||||||||||||| |  |||||| |||||||| ||||||    
T  1646698 aattttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagtcgtcgctctctaaaccttgttctct 1646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 13517714 - 13517888
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||  ||||||||||||||| ||||||||||| ||| |||    
T  13517714 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtatttctataaatagaacccttgtgttgaagcatgact 13517813  T
Q  169 aactt--tttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||  | |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  13517814 aacttaatgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacattgttctct 13517888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 6110994 - 6111181
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattac- 167  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||     
T  6110994 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattacc 6111093  T
Q  168 ----------taactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
               |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  6111094 aaaaaaaaaaaaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 6111181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18537900 - 18538076
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| || || |||||||||||||||||||||||| |||||| |||| |||||      
T  18537900 agagaaacgcggttcaccgtaaggtacagtgtagttaagtgttgtcttgctgaccgcacaagtgattctataaatagaactcttgtgctgaagcattatg 18537999  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||  ||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||  |||||||    
T  18538000 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttggtctctct 18538076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 17137283 - 17137432
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacac-aagtgattctataaatagaacacttgtgttgaaacattac 167  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||| |||||||||||| ||||||||||| ||||||    
T  17137283 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaaagtgattttataaatagaacccttgtgttgaagcattac 17137382  T
Q  168 taactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctag 215  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| ||||    
T  17137383 taactttttgtgagtgcttaacctaattaacaaaagttgtgaaacactag 17137432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 13212233 - 13212330
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatta 166  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  13212233 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgttcacacaagtgattctataaatagaacccttgtgttgaagcatta 13212330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 16201136 - 16201288
Alignment:
Q  83 caccgtaaggtacagtgta-tttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttt--tga 178  Q
    ||||||| ||||| ||||| |||||||| ||| |||  || |||||||||||||||||||||| |||| |||||| ||||  ||||   ||||||  |||    
T  16201136 caccgtatggtacggtgtactttaagtgcttgacttactgaccacacaagtgattctataaattgaacccttgtgctgaagtattatagacttttgttga 16201235  T
Q  179 -gtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaa 230  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  16201236 agtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaa 16201288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 23014645 - 23014478
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| ||| || ||||||||   |||||||||||| |   ||| || ||||||||||| ||||||||||||||| |||||| |||| ||||| |    
T  23014645 agagaaacgcagtctactgtaaggtatgatgtatttaagtggttggttgctgaccacacaagtggttctataaatagaacccttgtgctgaagcattagt 23014546  T
Q  169 aactttttgagtg-----cttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaacct 233  Q
    |||||||||  ||     |||||||||||||  |||||||  |||||||||||| ||||||| |||||||    
T  23014545 aactttttggttgaaacacttaacctaattc-taaaagtt-agaaaccctagccgccgctctctaaacct 23014478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 13212331 - 13212381
Alignment:
Q  193 tcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  13212331 tcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 13212381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 18252935 - 18253111
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  18252935 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 18253034  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  18253035 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18253111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 18531816 - 18531639
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||     
T  18531816 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattacg 18531717  T
Q  169 aac---tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||   ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  18531716 aacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 18531639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 27130686 - 27130510
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27130686 agagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 27130587  T
Q  169 aactttttg--agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  27130586 aactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagcctccgctctctaaaccttgttctctct 27130510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 27309854 - 27309681
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27309854 agagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctaaccacacaagtgattctataaatagaac-cttgtgttgaagcattact 27309756  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  27309755 aactttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 27309681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 72 - 241
Target Start/End: Complemental strand, 16358334 - 16358163
Alignment:
Q  72 gaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaac 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  16358334 gaaacgcggtccaccgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaaatgattctataaatagaacccttgtgttgaagcattactaac 16358235  T
Q  172 tttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    ||||  |||||||||||||||||||||||||||||||||||| ||||   |||||| ||||| || ||||||    
T  16358234 tttttgtgagtgcttaacctaattcacaaaagttgtgaaaccatagctgtcgctctctaaacgttgttctct 16358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 9076179 - 9076013
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||| || ||||||||  ||||||||||||||||| ||||||||||| |||||||    
T  9076179 agagaaacgcgatccaccgtaaggtatgctgtatttaagtgttgtcttgctgaccacacaaacgattctataaatagaacccttgtgttgaagcattact 9076080  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaacct 233  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  9076079 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacct 9076013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 36815882 - 36815749
Alignment:
Q  87 gtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg--agtgct 183  Q
    ||||||||| ||||| | ||||| ||| |||| || ||||||||||||||||||||||||||| ||||||||||| ||| ||  |||| |||  ||||||    
T  36815882 gtaaggtacggtgtactaaagtgcttggcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatgacagacttcttgtgagtgct 36815783  T
Q  184 taacctaattcacaaaagttgtgaaaccctagcc 217  Q
    ||||||||||||||||||||||||||||||||||    
T  36815782 taacctaattcacaaaagttgtgaaaccctagcc 36815749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 22641135 - 22641052
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatt 165  Q
    ||||||||||||  ||||||||||||| ||| || | || | |||||| || |||||||||||||||||||||| |||||||||    
T  22641135 caccgtaaggtatggtgtatttaagtggttgactagatgacgacacaattggttctataaatagaacacttgtgctgaaacatt 22641052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 27276724 - 27276691
Alignment:
Q  182 cttaacctaattcacaaaagttgtgaaaccctag 215  Q
    ||||||||||||||||||||||||||||||||||    
T  27276724 cttaacctaattcacaaaagttgtgaaaccctag 27276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 25662053 - 25662093
Alignment:
Q  123 cacacaagtgattctataaatagaacacttgtgttgaaaca 163  Q
    |||||||||| || |||||||||||| ||||||||||||||    
T  25662053 cacacaagtggttttataaatagaacccttgtgttgaaaca 25662093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 8013 - 8189
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8013 agagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattact 8112  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  8113 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 8189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 6095051 - 6095227
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  6095051 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcattact 6095150  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  6095151 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 6095227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 22172390 - 22172566
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  22172390 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 22172489  T
Q  169 aa-ctttt-tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  22172490 aatcttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 22172566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 21941570 - 21941748
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21941570 agagaaacgcggttcaccgtaaggtacgatgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 21941669  T
Q  169 aac----tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||    ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  21941670 aaccctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 21941748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 15327128 - 15327302
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||| |||||||    
T  15327128 agagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgtgttgaagcattact 15327227  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||| ||||||    
T  15327228 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctct 15327302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 15507497 - 15507671
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||| |||||||    
T  15507497 agagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgtgttgaagcattact 15507596  T
Q  169 aac--tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||| ||||||    
T  15507597 aaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctct 15507671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 28548952 - 28549129
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| || | ||| ||||||||||||||||||||| ||||||||||| ||| |||    
T  28548952 agagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctgactacataagtgattctataaatagaacccttgtgttgaagcatgact 28549051  T
Q  169 aac--tttttgagtgcttaacctaattcac-aaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||  ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||    
T  28549052 aacattttgtgagtgcttaacctaattcacaaaaagttgtgaaaccctagccgccgctctctaaacctggttctctct 28549129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 29230335 - 29230495
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg---a 178  Q
    |||||||||||| |||||| ||||||| |||  ||| || |||||||||||||||||||||||||||    ||| |||| ||||||| ||||||     |    
T  29230335 caccgtaaggtaaagtgtacttaagtgcttggtttgctgaccacacaagtgattctataaatagaac----gtgatgaagcattactgacttttgttaaa 29230430  T
Q  179 gtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  29230431 gtgcttaacctaactaacaaaagttgtgaaaccctagccgccgctccttaaaccttgttctctct 29230495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 24643537 - 24643624
Alignment:
Q  79 ggtccaccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacatt 165  Q
    |||||||||||| |||| ||||||||||||| ||| |||||||  |||||||||| ||||||||||||||| ||| || |||| ||||    
T  24643537 ggtccaccgtaaagtacggtgtatttaagtgattggcttgttgatcacacaagtggttctataaatagaacccttatgctgaagcatt 24643624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 24694760 - 24694586
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  24694760 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatagaacccttgtgttgaagcattact 24694661  T
Q  169 aactttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||  ||||||||    
T  24694660 aactttttgggtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctct 24694586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 24701524 - 24701350
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  24701524 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatagaacccttgtgttgaagcattact 24701425  T
Q  169 aactttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||  ||||||||    
T  24701424 aactttttgggtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctct 24701350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19706474 - 19706298
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||| |||    
T  19706474 agagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttatgttgaagcataact 19706375  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19706374 aacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19706298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 19713800 - 19713626
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  19713800 agagaaacgcggtccaccgtaaggtacagtatatttaagtgttgtcttgca--ccacacaagtgattctataaatagaacccttgtgttgaagcataact 19713703  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  19713702 aacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaacctttttctctct 19713626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 18565768 - 18565590
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacac-----ttgtgttgaaaca 163  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||| |     |||||||||| ||    
T  18565768 agagaaacgcggtccactgtaaggcacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgtgttgaagca 18565669  T
Q  164 ttactaactttt---tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttct 239  Q
    |||| |||||||   |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||    
T  18565668 ttacaaacttttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccggtctctaaaccttgttct 18565590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 39539549 - 39539586
Alignment:
Q  126 acaagtgattctataaatagaacacttgtgttgaaaca 163  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  39539549 acaagtggttctataaatagaacccttgtgttgaaaca 39539586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 6211 - 6035
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  6211 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccatacaagtgattctataaatagaacccttgtgttgaagcattact 6112  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  6111 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 13227 - 13051
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  13227 agagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattact 13128  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||    
T  13127 aactttttgtgagtgcttaacctaattcacaacagttgtgaaaccctagccgccgctctctaaaccttgttctctct 13051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 231
Target Start/End: Complemental strand, 21329546 - 21329380
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctat--aaatagaacacttgtgttgaaacatta 166  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  21329546 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaatagaacccttgtgttgaaacatta 21329447  T
Q  167 ctaactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21329446 ctaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac 21329380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 225
Target Start/End: Complemental strand, 22791135 - 22790977
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  22791135 agagaaacgcagtccactgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgttttgtagcattact 22791036  T
Q  169 aactttt--tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctct 225  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22791035 aactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctct 22790977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 27353286 - 27353366
Alignment:
Q  83 caccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaac 162  Q
    ||||||||||||| ||||| ||||||| ||| |||| || ||||||||| | |||||||||||||||||||||| ||||||    
T  27353286 caccgtaaggtacggtgtaattaagtgattgacttgatgaccacacaaggggttctataaatagaacacttgtgctgaaac 27353366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 41664787 - 41664846
Alignment:
Q  183 ttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctc 242  Q
    |||||||||||||||||||||||||||||||||||  || ||| |||||||| |||||||    
T  41664787 ttaacctaattcacaaaagttgtgaaaccctagccgtcgttctctaaaccttgttctctc 41664846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 19219 - 19382
Alignment:
Q  71 agaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattactaa 170  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19219 agaaacgcggtccactggaaggtacggtgtatttaagtgttgtcttgttgcccacacaagtgattctataaatagaacccttgtgttgaaacattactaa 19318  T
Q  171 ctttttg---agtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaac 231  Q
    |||||||   |||||||||||||||||||||||||||||||||||||||| || |||| |||||    
T  19319 ctttttgtgaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccactctctaaac 19382  T

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Target: scaffold1199 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 25 - 206
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||| |||||      
T  25 agagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagttattctataaatagaacccttgtgttgaagcattatg 124  T
Q  169 aactttt-------tgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctctct 243  Q
    |||||||       |||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||    
T  125 aactttttgaaaagtgagtgcttaacctaattcacaaaagttgtgaaaccatagccgccgctatctaaaccttgttctctct 206  T

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Target: scaffold0008 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 229693 - 229515
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattact 168  Q
    ||||||| | ||||||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||| ||| ||||||| ||| ||     
T  229693 agagaaatgtggtccaccgtaaggtacggtgtatttaagtgttttcttgctgaccacacaagtgattctataaatagaacccttctgttgaagcatgacg 229594  T
Q  169 aac------tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    |||      ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  229593 aacttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgttctct 229515  T

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Target: scaffold0063 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 6428 - 6607
Alignment:
Q  70 gagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacacttgtgttgaaacattacta 169  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| || |    
T  6428 gagaaactcggtccaccgtaaagtatggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatgacga 6527  T
Q  170 ac--------tttttgagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctttaaaccttcttctct 241  Q
    ||        ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  6528 acttttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgttctct 6607  T

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Target: scaffold0032 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 107497 - 107373
Alignment:
Q  122 ccacacaagtgattctataaatagaacacttgtgttgaaacattactaactttttg---agtgcttaacctaattcacaaaagttgtgaaaccctagcca 218  Q
    ||||||||||| |||| |||||||||| |||||| |||| ||||||||| ||||||   |   |||||  |||||||||||||||||||||||||||||     
T  107497 ccacacaagtggttctgtaaatagaacccttgtgctgaagcattactaagtttttgttgaacacttaagataattcacaaaagttgtgaaaccctagccg 107398  T
Q  219 ccgctctttaaaccttcttctctct 243  Q
    || ||||||||| ||| ||||||||    
T  107397 ccactctttaaatcttgttctctct 107373  T

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Target: scaffold1303 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 1267 - 1180
Alignment:
Q  69 agagaaacgcggtccaccgtaaggtacagtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacacttgtg 155  Q
    ||||||| |||||||| |||||||||| |||| ||||| || ||| |||| || |||| |||||| ||||||||||||||||||||||    
T  1267 agagaaatgcggtccagcgtaaggtacggtgtgtttaattgattgacttgatgaccacgcaagtggttctataaatagaacacttgtg 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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