View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18458_low_13 (Length: 243)
Name: NF18458_low_13
Description: NF18458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18458_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 6019781 - 6020019
Alignment:
| Q |
1 |
taggagcaaccatttagatccaaatcatttttaatagttttgctgtttttcttaatcatattcagcatctgacattgcaagccacttcgcatttgatcaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6019781 |
taggagcaaccatttagatccaaatcatttttaatagttttgctgtttttcttaatcatattcagcatctgacattgcaagccacttcgcatttgatcaa |
6019880 |
T |
|
| Q |
101 |
ttattattattggtcttttactcgtctgaccaaactatcttatagatgacattctaccaagtaccaccttttgcttaatatatgccatcatatttcctgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
6019881 |
ttattattattggtcttttactcgtctgaccaaactatcttatagatgacattctaccaagtaccaccttttgcttaatatatgccatcatatttcctgt |
6019980 |
T |
|
| Q |
201 |
cttttacaaatgtagtcagttccgatcttgtatattcat |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
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|
| T |
6019981 |
cttttacaaatgtagtcagttccgatcttgtatattcat |
6020019 |
T |
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