View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18459_high_12 (Length: 268)
Name: NF18459_high_12
Description: NF18459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18459_high_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 32767851 - 32768116
Alignment:
| Q |
1 |
gtagtgtgaatgaatttgaaagaaacagaaaaaacaaaccgcttttgtggttaggatcacaatcataaccgagttcttcagtttcataatcatcgagcaa |
100 |
Q |
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| T |
32767851 |
gtagtgtgaatgaatttgaaa--aacagaaaaaacaaaccgcttttgtggttaggatcacaatcataaccgagttcttcagtttcataatcatcgagcaa |
32767948 |
T |
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| Q |
101 |
gcccaaattccggtcaggcttcatgctgagggataagaatgaactgtcatcatctatttcttcatcatcttcttgtacttgttgttgaagaagaaaaagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32767949 |
gcccaaattccggtcaggcttcatgctgagggataagaatgaactgtcatcatctatttcttcatcatcttcttgtactttttgttgaagaagaaaaagc |
32768048 |
T |
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| Q |
201 |
tcttgtttggttggaaatgctttggagggagagtgtttggttcggcaacagagatgtggcgttgattc |
268 |
Q |
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|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |
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| T |
32768049 |
tcttgtttggttgggaatgctttggagggagagtatttggttcggcaacagagatgtgacgttgattc |
32768116 |
T |
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