View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18459_high_13 (Length: 260)
Name: NF18459_high_13
Description: NF18459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18459_high_13 |
 |  |
|
| [»] scaffold0958 (1 HSPs) |
 |  |  |
|
| [»] scaffold0425 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8569550 - 8569306
Alignment:
| Q |
1 |
cataatagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8569550 |
cataatagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattcttgcaccatctttcaaatcaagagagccaca |
8569451 |
T |
 |
| Q |
101 |
ccaaatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaaga |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8569450 |
ccaaatatgacgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagattctgattttgccaaatcattaacaaga |
8569351 |
T |
 |
| Q |
201 |
tcatgcattaccagtatggtacgactatacagtggatttatcgat |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8569350 |
tcatgcattaccagtatggtacgactatacagtggatttatcgat |
8569306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 8471004 - 8471204
Alignment:
| Q |
5 |
atagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaa |
104 |
Q |
| |
|
||||||| ||| ||||||||| || | |||||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||||||||| | ||| ||| |
|
|
| T |
8471004 |
atagcctcgtgattctaccagcaggctgcgtaacccctttatcttataaatctgctttaatattctagcaccatctttcaaatcaagata---acagcaa |
8471100 |
T |
 |
| Q |
105 |
atatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcat |
204 |
Q |
| |
|
|| ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
8471101 |
atgtgacgtgttctttcagatatatcttgcacactatcaccctcaatttgtaagcaaaactcttgggactctgattttgccaaatcattgacaagatcat |
8471200 |
T |
 |
| Q |
205 |
gcat |
208 |
Q |
| |
|
|||| |
|
|
| T |
8471201 |
gcat |
8471204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 6795176 - 6795003
Alignment:
| Q |
32 |
gcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaaatatgatgtgtcctttcagatatatct |
131 |
Q |
| |
|
||||||||||||||| ||| ||||||| | |||| |||||||||||||| | |||||||| ||| ||| ||||||| |||| |||||| ||||||| |
|
|
| T |
6795176 |
gcgtaatcccttaatattagaaatgtgattcaatactctcgcaccatcttcccaatcaagatagcaaca---aatatgacgtgttctttcaattatatct |
6795080 |
T |
 |
| Q |
132 |
tgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcatgcat |
208 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || | ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
6795079 |
tgcagactatcaccctcaatttgtaagcaaaactcatgggacactgattttgccaaatcattgacaagatcatgcat |
6795003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 6839469 - 6839296
Alignment:
| Q |
32 |
gcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaaatatgatgtgtcctttcagatatatct |
131 |
Q |
| |
|
|||||| ||||||| ||||||||||||| |||||||| | |||||||||| ||||||||| | |||| ||| ||| |||| ||||||| ||||||| |
|
|
| T |
6839469 |
gcgtaaccccttaaacttataaatgtgctttaatatttgctcaccatctttgaaatcaagattg---caccgaatgtgacgtgttctttcagttatatct |
6839373 |
T |
 |
| Q |
132 |
tgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcatgcat |
208 |
Q |
| |
|
||||| |||||| |||||||||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6839372 |
tgcagattatcactctcaatttgtaagcaaaactcttgggactcagattttgccaaatcattaacaagatcatgcat |
6839296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 7587403 - 7587509
Alignment:
| Q |
102 |
caaatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagat |
201 |
Q |
| |
|
||||| ||| |||| ||||||| ||| | ||| || |||||||||||||||||||||||||| || | ||||||||||||||||||||||| ||||||| |
|
|
| T |
7587403 |
caaatgtgacgtgttctttcagttatgtattgaagactatcaccctcaatttgtaagcaaaactcatgggactctgattttgccaaatcattgacaagat |
7587502 |
T |
 |
| Q |
202 |
catgcat |
208 |
Q |
| |
|
||||||| |
|
|
| T |
7587503 |
catgcat |
7587509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 5280106 - 5280306
Alignment:
| Q |
5 |
atagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaa |
104 |
Q |
| |
|
|||||||||| |||||||| | || ||||||||||||||||||| |||| | | |||| |||| ||||| |||| |||||||||||| ||||| |
|
|
| T |
5280106 |
atagccttgttcttctaccttcaaactgcgtaatcccttaatcttacaaatattctctaattttctataaccatatttccaatcaagagagc---accaa |
5280202 |
T |
 |
| Q |
105 |
atatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcat |
204 |
Q |
| |
|
||||| ||| ||||||| |||||||||| |||||||||||| ||| |||| ||||||||| ||| ||||| |||| |||||| | |||||||||| |
|
|
| T |
5280203 |
atatggcgtgctctttcagggatatcttgcaccctatcaccctctattcgtaaagaaaattctcctgacactgatcttgctaaatcaatgacaagatcat |
5280302 |
T |
 |
| Q |
205 |
gcat |
208 |
Q |
| |
|
|||| |
|
|
| T |
5280303 |
gcat |
5280306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 6591929 - 6591729
Alignment:
| Q |
5 |
atagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaa |
104 |
Q |
| |
|
|||||||||||||||||||| |||| | ||| ||| ||||| |||| ||| ||| | | | |||| ||||||||| ||||||||| ||| ||||| |
|
|
| T |
6591929 |
atagccttgtgcttctaccatcagactgtgtagtcctttaattttatgaatctgcttcagttttctatcaccatcttccaaatcaaggcagc---accaa |
6591833 |
T |
 |
| Q |
105 |
atatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcat |
204 |
Q |
| |
|
|||||| ||||||| | || |||||||||| | ||||||| |||| |||||| ||||||| ||| |||||||||| |||||||| |||||||||| |
|
|
| T |
6591832 |
atatgacgtgtcctattagggatatcttgcacgttgccaccctctatttctaagcagaattctcctgacactgattttgctaaatcattgacaagatcat |
6591733 |
T |
 |
| Q |
205 |
gcat |
208 |
Q |
| |
|
|||| |
|
|
| T |
6591732 |
gcat |
6591729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 6916554 - 6916754
Alignment:
| Q |
5 |
atagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaa |
104 |
Q |
| |
|
|||||||||||||||||||| |||| | ||| ||| ||||| |||| ||| ||| ||| | |||| ||||||||| ||||||||| || |||||| |
|
|
| T |
6916554 |
atagccttgtgcttctaccatcagactgtgtagtcctttaattttatgaatctgctttagttttctatcaccatcttccaaatcaag---gcagcaccaa |
6916650 |
T |
 |
| Q |
105 |
atatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcat |
204 |
Q |
| |
|
|||||| ||||||||| || |||||||||| | |||| ||| ||| | |||| ||||||| ||| |||||||||| |||||||| |||||||||| |
|
|
| T |
6916651 |
atatgacgtgtccttttagggatatcttgcacgttttcactctctattcggaagcggaattctcccgacactgattttgctaaatcattgacaagatcat |
6916750 |
T |
 |
| Q |
205 |
gcat |
208 |
Q |
| |
|
|||| |
|
|
| T |
6916751 |
gcat |
6916754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 5298239 - 5298371
Alignment:
| Q |
73 |
caccatctttcaaatcaagagagccacaccaaatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgaga |
172 |
Q |
| |
|
|||||||||| || |||||||||| ||||||| ||| |||||||||||| ||||||||| || ||||||||| ||| || |||||||||| || |
|
|
| T |
5298239 |
caccatcttttaattcaagagagc---accaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcccga |
5298335 |
T |
 |
| Q |
173 |
ctctgattttgccaaatcattaacaagatcatgcat |
208 |
Q |
| |
|
| |||||||||| ||||| || |||||||||||||| |
|
|
| T |
5298336 |
cactgattttgctaaatcgttgacaagatcatgcat |
5298371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 6899541 - 6899741
Alignment:
| Q |
5 |
atagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaa |
104 |
Q |
| |
|
|||||||||||||||||||| |||| | ||| ||||||||| ||| ||| ||| || | |||| ||||||||| ||||||||| ||| ||||| |
|
|
| T |
6899541 |
atagccttgtgcttctaccatcagactgtgtagtcccttaattttaagaatatgctctagttttctatcaccatcttccaaatcaaggcagc---accaa |
6899637 |
T |
 |
| Q |
105 |
atatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcat |
204 |
Q |
| |
|
|| || | |||||||||| ||||||||||| |||||||||| ||| ||||| |||||||| ||| || |||| || ||||||| |||||||||| |
|
|
| T |
6899638 |
atctggcgcgtcctttcagggatatcttgcaggttatcaccctctattcttaagcgaaattctcctgacactaatttcgctaaatcatatacaagatcat |
6899737 |
T |
 |
| Q |
205 |
gcat |
208 |
Q |
| |
|
|||| |
|
|
| T |
6899738 |
gcat |
6899741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 6735526 - 6735630
Alignment:
| Q |
104 |
aatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatca |
203 |
Q |
| |
|
||||||| ||||||||||| ||| ||| || |||| ||||||| ||||| || |||||||||| ||| ||||||||| |||||||| ||||||||| |
|
|
| T |
6735526 |
aatatgacgtgtcctttcattgataccttccaccctagcaccctctatttgcaaacaaaattctcctgacactgattttgttaaatcattgacaagatca |
6735625 |
T |
 |
| Q |
204 |
tgcat |
208 |
Q |
| |
|
||||| |
|
|
| T |
6735626 |
tgcat |
6735630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 6141739 - 6141939
Alignment:
| Q |
5 |
atagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaa |
104 |
Q |
| |
|
|||||||||||||||||||| |||| ||| ||| ||||| |||| ||| ||| ||| | |||| ||||||||| ||||||||| || ||||||| |
|
|
| T |
6141739 |
atagccttgtgcttctaccatcagactctgtagtcctttaatgttatgaatatgctttagttttctatcaccatcttccaaatcaag---gcaacaccaa |
6141835 |
T |
 |
| Q |
105 |
atatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcat |
204 |
Q |
| |
|
|| ||| ||||||||||| |||||||||| ||||||| || ||| |||||| |||||| | | |||||| || |||||||| |||||||||| |
|
|
| T |
6141836 |
atgtgacgtgtcctttcattgatatcttgcacgttatcaccttcgattcgtaagcgggattctcttgtcaatgatttcgctaaatcattgacaagatcat |
6141935 |
T |
 |
| Q |
205 |
gcat |
208 |
Q |
| |
|
|||| |
|
|
| T |
6141936 |
gcat |
6141939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 6244746 - 6244946
Alignment:
| Q |
5 |
atagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaa |
104 |
Q |
| |
|
|||||||||||||||||||| |||| |||| ||| ||||| |||| ||| ||| ||| | |||| ||||||||| ||||||||| || |||||| |
|
|
| T |
6244746 |
atagccttgtgcttctaccatcagactccgtactcctttaatgttatgaatctgctttagttttctatcaccatcttccaaatcaag---gcagcaccaa |
6244842 |
T |
 |
| Q |
105 |
atatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcat |
204 |
Q |
| |
|
|| ||| ||||||||| || |||||||||| | ||||||| ||| ||||||| ||||||| ||| |||| | || ||||||| |||||||||| |
|
|
| T |
6244843 |
atgtgacgtgtcctttgagggatatcttgcactttcacaccctctattcgtaagcagaattctcctgacattgatgtcgctaaatcatggacaagatcat |
6244942 |
T |
 |
| Q |
205 |
gcat |
208 |
Q |
| |
|
|||| |
|
|
| T |
6244943 |
gcat |
6244946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 6520670 - 6520566
Alignment:
| Q |
104 |
aatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatca |
203 |
Q |
| |
|
||||||| ||||||||||| | | ||| || |||| ||||||| ||||| | |||||||||| ||| |||||||||| |||||||| ||||||||| |
|
|
| T |
6520670 |
aatatgacgtgtcctttcaacgagaccttccaccctaacaccctctatttgcatacaaaattctcttgacactgattttgctaaatcattgacaagatca |
6520571 |
T |
 |
| Q |
204 |
tgcat |
208 |
Q |
| |
|
||||| |
|
|
| T |
6520570 |
tgcat |
6520566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 6554931 - 6554827
Alignment:
| Q |
104 |
aatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatca |
203 |
Q |
| |
|
||||||| ||||||||||| ||| ||| || |||| ||||||| ||||| | |||||||||| ||| ||||||||| |||||||| ||||||||| |
|
|
| T |
6554931 |
aatatgacgtgtcctttcattgataccttccaccctagcaccctctatttgcatacaaaattctcctgacactgattttgttaaatcattgacaagatca |
6554832 |
T |
 |
| Q |
204 |
tgcat |
208 |
Q |
| |
|
||||| |
|
|
| T |
6554831 |
tgcat |
6554827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 6449297 - 6449188
Alignment:
| Q |
99 |
caccaaatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaa |
198 |
Q |
| |
|
|||||||||||| |||||||| || |||| |||| | || ||||||| ||||| | |||||||||| ||| ||||||||| |||||||| |||| |
|
|
| T |
6449297 |
caccaaatatgacgtgtccttacacttatacaatgcaccttaacaccctctatttgcatacaaaattctcctgacactgattttgttaaatcattcacaa |
6449198 |
T |
 |
| Q |
199 |
gatcatgcat |
208 |
Q |
| |
|
|||||||||| |
|
|
| T |
6449197 |
gatcatgcat |
6449188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 8589320 - 8589369
Alignment:
| Q |
159 |
caaaattctcgagactctgattttgccaaatcattaacaagatcatgcat |
208 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||| |||||||||||||| |
|
|
| T |
8589320 |
caaaattctcctgacactgattttgctaaatcattgacaagatcatgcat |
8589369 |
T |
 |
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Target: scaffold0958 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0958
Description:
Target: scaffold0958; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 460 - 217
Alignment:
| Q |
1 |
cataatagccttgtgcttctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccaca |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| || |
|
|
| T |
460 |
cataatagccttgtgcttctaccggtagaccgtgtaatcccttaatcttataaatgtgccttaatattcaagcaccatctttcgaattaagagagccgca |
361 |
T |
 |
| Q |
101 |
ccaaatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaaga |
200 |
Q |
| |
|
| |||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
360 |
ctaaatatgacgtgtcctttttgatatatcgtgcaccctatcaccctcaatttgtaagcaaaattgtcgagactctgattttgccaaatcattaacaaga |
261 |
T |
 |
| Q |
201 |
tcatgcattaccagtatggtacgactatacagtggatttatcga |
244 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
260 |
tcatgcattaccaatatggtactactatacattggatttatcga |
217 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 6573876 - 6573690
Alignment:
| Q |
19 |
ctaccagtagaccgcgtaatcccttaatcttataaatgtgccttaatattctcgcaccatctttcaaatcaagagagccacaccaaatatgatgtgtcct |
118 |
Q |
| |
|
|||||| ||| | |||||||||||||||| ||||||||||| | |||||||| |||||||||| |||| |||| |||| ||||||||||| ||||||| |
|
|
| T |
6573876 |
ctaccaataggctgcgtaatcccttaatcatataaatgtgcttcaatattctagcaccatcttccaaaccaagggagc---accaaatatgacgtgtcct |
6573780 |
T |
 |
| Q |
119 |
ttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatcatgcat |
208 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||| | | ||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
6573779 |
ttcagatatatcttgcaccctatcaccctcaatttgtaagcaaaatttttgggactctgatttagctaaatcatttacaagatcatgcat |
6573690 |
T |
 |
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Target: scaffold0425 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 7970 - 7866
Alignment:
| Q |
104 |
aatatgatgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgagactctgattttgccaaatcattaacaagatca |
203 |
Q |
| |
|
||||||| ||||||||||| ||| ||| || |||| ||||||| ||||| || |||||||||| ||| ||||||||| |||||||| ||||||||| |
|
|
| T |
7970 |
aatatgacgtgtcctttcattgataccttccaccctagcaccctctatttgcaaacaaaattctcctgacactgattttgttaaatcattgacaagatca |
7871 |
T |
 |
| Q |
204 |
tgcat |
208 |
Q |
| |
|
||||| |
|
|
| T |
7870 |
tgcat |
7866 |
T |
 |
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