View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18459_high_6 (Length: 337)

Name: NF18459_high_6
Description: NF18459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18459_high_6
NF18459_high_6
[»] chr4 (44 HSPs)
chr4 (17-309)||(51330995-51331274)
chr4 (162-309)||(50398383-50398531)
chr4 (162-309)||(50398839-50398986)
chr4 (162-309)||(23943087-23943235)
chr4 (162-282)||(15268018-15268139)
chr4 (162-305)||(7678467-7678611)
chr4 (162-309)||(24629281-24629426)
chr4 (194-309)||(1645626-1645742)
chr4 (202-305)||(9423743-9423847)
chr4 (187-309)||(44470745-44470868)
chr4 (187-309)||(44471195-44471318)
chr4 (201-309)||(21067878-21067987)
chr4 (194-309)||(3169353-3169469)
chr4 (162-309)||(21067429-21067577)
chr4 (162-253)||(4127263-4127354)
chr4 (161-309)||(23350127-23350276)
chr4 (187-274)||(7381449-7381537)
chr4 (162-309)||(13266233-13266381)
chr4 (162-309)||(49998783-49998931)
chr4 (162-249)||(35477868-35477955)
chr4 (184-309)||(35871774-35871900)
chr4 (201-309)||(23942673-23942782)
chr4 (175-309)||(14572012-14572147)
chr4 (187-277)||(40607110-40607201)
chr4 (187-253)||(4414257-4414323)
chr4 (180-252)||(5810039-5810111)
chr4 (203-277)||(4127775-4127850)
chr4 (187-245)||(29628524-29628582)
chr4 (164-249)||(1464355-1464439)
chr4 (162-227)||(50399334-50399399)
chr4 (201-249)||(27578170-27578218)
chr4 (184-252)||(27578324-27578392)
chr4 (194-252)||(8467690-8467748)
chr4 (174-244)||(14571545-14571615)
chr4 (225-309)||(12691907-12691992)
chr4 (187-240)||(53996000-53996053)
chr4 (184-248)||(33294759-33294823)
chr4 (262-310)||(50399269-50399317)
chr4 (222-309)||(50814730-50814818)
chr4 (187-234)||(33987019-33987066)
chr4 (203-252)||(27026707-27026756)
chr4 (191-252)||(27578783-27578844)
chr4 (162-234)||(13265859-13265931)
chr4 (184-252)||(31817005-31817073)
[»] chr5 (37 HSPs)
chr5 (158-309)||(42788493-42788645)
chr5 (162-309)||(8641886-8642033)
chr5 (162-309)||(34372215-34372363)
chr5 (180-309)||(17445324-17445454)
chr5 (162-309)||(2474552-2474700)
chr5 (162-309)||(3886908-3887056)
chr5 (162-309)||(34371759-34371907)
chr5 (159-277)||(3886449-3886568)
chr5 (180-306)||(10927272-10927399)
chr5 (161-309)||(1822053-1822202)
chr5 (184-309)||(22557116-22557243)
chr5 (163-253)||(2474153-2474243)
chr5 (191-309)||(8391202-8391321)
chr5 (184-277)||(22556715-22556810)
chr5 (187-309)||(29679983-29680106)
chr5 (162-253)||(2194008-2194099)
chr5 (161-252)||(30720110-30720201)
chr5 (162-275)||(15512863-15512977)
chr5 (162-309)||(189215-189363)
chr5 (192-309)||(27646716-27646834)
chr5 (162-305)||(20039327-20039470)
chr5 (187-253)||(1880280-1880346)
chr5 (164-234)||(21883938-21884008)
chr5 (205-253)||(187762-187810)
chr5 (175-282)||(11757145-11757253)
chr5 (162-277)||(20858393-20858509)
chr5 (184-248)||(24182119-24182183)
chr5 (187-277)||(38063705-38063795)
chr5 (162-309)||(39147086-39147227)
chr5 (161-252)||(30684861-30684952)
chr5 (187-248)||(18750072-18750133)
chr5 (180-248)||(18304640-18304708)
chr5 (191-277)||(8366645-8366730)
chr5 (236-306)||(10926871-10926942)
chr5 (170-234)||(4673342-4673406)
chr5 (204-260)||(5066781-5066837)
chr5 (160-252)||(30719654-30719746)
[»] chr2 (30 HSPs)
chr2 (162-301)||(33175112-33175251)
chr2 (173-309)||(32377578-32377715)
chr2 (162-309)||(30966837-30966985)
chr2 (187-309)||(16379084-16379207)
chr2 (161-309)||(15639881-15640030)
chr2 (162-309)||(1912671-1912819)
chr2 (162-309)||(5399668-5399816)
chr2 (162-309)||(25337848-25337996)
chr2 (162-309)||(32377758-32377906)
chr2 (187-309)||(16379540-16379663)
chr2 (164-309)||(30966381-30966527)
chr2 (162-309)||(24818473-24818620)
chr2 (187-309)||(33174650-33174772)
chr2 (206-309)||(15620045-15620149)
chr2 (187-309)||(25433932-25434055)
chr2 (160-309)||(33771148-33771298)
chr2 (180-253)||(11389687-11389760)
chr2 (180-253)||(11406348-11406421)
chr2 (187-277)||(8181238-8181328)
chr2 (207-309)||(8256673-8256776)
chr2 (203-309)||(29259512-29259619)
chr2 (192-251)||(36924362-36924421)
chr2 (187-249)||(20502172-20502234)
chr2 (203-309)||(27882818-27882925)
chr2 (162-233)||(29804871-29804942)
chr2 (162-252)||(30963114-30963204)
chr2 (189-247)||(37552775-37552833)
chr2 (186-305)||(13191125-13191245)
chr2 (162-301)||(1707196-1707336)
chr2 (265-309)||(38898867-38898911)
[»] chr8 (37 HSPs)
chr8 (162-305)||(32292092-32292236)
chr8 (162-309)||(27022190-27022337)
chr8 (162-277)||(21315961-21316076)
chr8 (162-309)||(25148114-25148261)
chr8 (162-309)||(10844466-10844614)
chr8 (162-309)||(22548400-22548548)
chr8 (162-309)||(22548846-22548994)
chr8 (162-309)||(17103228-17103377)
chr8 (162-309)||(32292544-32292699)
chr8 (187-309)||(8080218-8080341)
chr8 (193-309)||(2044205-2044322)
chr8 (162-306)||(25147686-25147830)
chr8 (162-309)||(12827105-12827253)
chr8 (162-309)||(34308330-34308478)
chr8 (162-309)||(34308786-34308934)
chr8 (187-309)||(12100838-12100960)
chr8 (162-309)||(22026526-22026675)
chr8 (160-244)||(9251098-9251182)
chr8 (187-309)||(41658981-41659104)
chr8 (187-253)||(30527358-30527424)
chr8 (161-253)||(6463393-6463486)
chr8 (162-309)||(27926046-27926193)
chr8 (167-309)||(28453485-28453628)
chr8 (187-277)||(31283528-31283619)
chr8 (203-309)||(33852150-33852257)
chr8 (187-309)||(41913117-41913240)
chr8 (208-277)||(22705354-22705424)
chr8 (188-243)||(29971304-29971359)
chr8 (187-239)||(22840425-22840477)
chr8 (180-252)||(25307969-25308041)
chr8 (202-245)||(15567447-15567490)
chr8 (162-225)||(27021840-27021903)
chr8 (162-252)||(10729828-10729918)
chr8 (203-244)||(28374015-28374056)
chr8 (192-249)||(29117444-29117501)
chr8 (168-252)||(27819105-27819187)
chr8 (201-249)||(34688044-34688092)
[»] scaffold0243 (1 HSPs)
scaffold0243 (161-309)||(1367-1516)
[»] chr6 (32 HSPs)
chr6 (160-309)||(17730958-17731108)
chr6 (162-309)||(17027382-17027530)
chr6 (162-304)||(7912030-7912173)
chr6 (162-309)||(9352209-9352357)
chr6 (162-309)||(20850468-20850616)
chr6 (156-309)||(13191358-13191512)
chr6 (162-309)||(13492479-13492628)
chr6 (161-309)||(28780257-28780406)
chr6 (162-309)||(11062432-11062581)
chr6 (162-309)||(21311662-21311810)
chr6 (187-309)||(2890715-2890838)
chr6 (157-309)||(20126028-20126181)
chr6 (162-309)||(23776587-23776735)
chr6 (187-309)||(3652670-3652793)
chr6 (160-309)||(20896536-20896687)
chr6 (187-305)||(2891170-2891288)
chr6 (183-253)||(11062033-11062103)
chr6 (157-309)||(13492936-13493090)
chr6 (164-309)||(3653049-3653191)
chr6 (162-253)||(2681071-2681162)
chr6 (187-305)||(2720439-2720558)
chr6 (161-306)||(21312121-21312267)
chr6 (162-252)||(23986168-23986258)
chr6 (209-309)||(6330811-6330911)
chr6 (165-253)||(7912514-7912602)
chr6 (187-309)||(17851065-17851188)
chr6 (186-245)||(27334305-27334364)
chr6 (186-245)||(27395045-27395104)
chr6 (162-248)||(9440708-9440794)
chr6 (187-245)||(14771595-14771653)
chr6 (162-234)||(6331219-6331291)
chr6 (187-227)||(21312468-21312508)
[»] chr7 (39 HSPs)
chr7 (161-309)||(7646328-7646477)
chr7 (162-309)||(7646562-7646710)
chr7 (162-309)||(34405442-34405590)
chr7 (162-309)||(9125106-9125254)
chr7 (162-309)||(36422399-36422546)
chr7 (187-309)||(42515239-42515362)
chr7 (160-309)||(2941606-2941756)
chr7 (161-309)||(28496001-28496150)
chr7 (186-309)||(42515691-42515815)
chr7 (162-309)||(2193403-2193551)
chr7 (162-309)||(29038871-29039019)
chr7 (187-309)||(2611535-2611651)
chr7 (187-309)||(22529111-22529234)
chr7 (173-309)||(13124997-13125135)
chr7 (184-276)||(43233137-43233230)
chr7 (162-309)||(2466071-2466218)
chr7 (163-309)||(2189291-2189438)
chr7 (187-277)||(6747952-6748042)
chr7 (173-309)||(13122366-13122504)
chr7 (162-252)||(28495470-28495560)
chr7 (161-309)||(6718925-6719073)
chr7 (201-309)||(35474011-35474120)
chr7 (201-309)||(3305238-3305347)
chr7 (162-277)||(18833465-18833581)
chr7 (161-309)||(679963-680112)
chr7 (162-248)||(36422591-36422677)
chr7 (162-247)||(6747457-6747542)
chr7 (177-249)||(36015335-36015407)
chr7 (196-306)||(29357341-29357452)
chr7 (203-309)||(43776182-43776289)
chr7 (184-244)||(26419108-26419168)
chr7 (162-252)||(25182566-25182656)
chr7 (187-249)||(31743765-31743827)
chr7 (203-248)||(7461274-7461319)
chr7 (196-243)||(11372657-11372704)
chr7 (207-249)||(5406483-5406525)
chr7 (237-309)||(2465880-2465953)
chr7 (268-309)||(46425888-46425929)
chr7 (162-218)||(43776324-43776380)
[»] chr3 (37 HSPs)
chr3 (162-309)||(8067427-8067575)
chr3 (162-309)||(37045182-37045327)
chr3 (160-309)||(50347893-50348043)
chr3 (162-308)||(25248259-25248407)
chr3 (162-309)||(32227647-32227795)
chr3 (162-305)||(39653315-39653459)
chr3 (162-309)||(13150405-13150553)
chr3 (165-309)||(13149953-13150098)
chr3 (162-309)||(16811528-16811674)
chr3 (193-309)||(20884999-20885116)
chr3 (162-309)||(32227072-32227220)
chr3 (164-309)||(11179887-11180033)
chr3 (173-309)||(27187191-27187329)
chr3 (187-307)||(25230124-25230245)
chr3 (187-307)||(25237711-25237832)
chr3 (202-309)||(25238575-25238683)
chr3 (162-309)||(31284127-31284275)
chr3 (187-309)||(4067236-4067359)
chr3 (187-309)||(25230581-25230704)
chr3 (187-309)||(25238168-25238291)
chr3 (162-309)||(14820301-14820449)
chr3 (187-253)||(25239003-25239069)
chr3 (160-309)||(28561893-28562042)
chr3 (162-309)||(14814096-14814244)
chr3 (161-309)||(30529834-30529982)
chr3 (173-309)||(32386596-32386733)
chr3 (162-277)||(16811104-16811220)
chr3 (186-253)||(41473745-41473812)
chr3 (187-253)||(2911288-2911354)
chr3 (162-309)||(7477338-7477486)
chr3 (187-309)||(25802424-25802547)
chr3 (162-252)||(7494086-7494176)
chr3 (202-244)||(25230988-25231030)
chr3 (162-234)||(30477273-30477344)
chr3 (187-248)||(15405755-15405816)
chr3 (203-252)||(18318860-18318909)
chr3 (184-252)||(53150685-53150753)
[»] chr1 (33 HSPs)
chr1 (162-309)||(20053931-20054079)
chr1 (162-309)||(20054387-20054535)
chr1 (162-309)||(20054843-20054991)
chr1 (162-309)||(20055299-20055447)
chr1 (162-309)||(20055755-20055903)
chr1 (162-309)||(20056211-20056359)
chr1 (162-309)||(20057114-20057262)
chr1 (162-309)||(20057570-20057718)
chr1 (162-309)||(20056667-20056815)
chr1 (162-309)||(50002926-50003074)
chr1 (160-309)||(20845510-20845660)
chr1 (162-309)||(16451784-16451932)
chr1 (162-309)||(16460937-16461085)
chr1 (161-309)||(46693585-46693734)
chr1 (162-309)||(38341053-38341201)
chr1 (162-309)||(50002558-50002706)
chr1 (162-277)||(52250385-52250501)
chr1 (162-309)||(52250690-52250838)
chr1 (162-309)||(52251027-52251175)
chr1 (162-277)||(20060191-20060307)
chr1 (161-306)||(35759458-35759604)
chr1 (187-302)||(7547791-7547907)
chr1 (162-260)||(7229794-7229892)
chr1 (162-250)||(35759915-35760003)
chr1 (187-309)||(43056941-43057064)
chr1 (162-244)||(49996531-49996613)
chr1 (162-277)||(31822970-31823086)
chr1 (186-309)||(51372749-51372873)
chr1 (193-309)||(43057405-43057522)
chr1 (162-242)||(35009859-35009939)
chr1 (175-234)||(28181357-28181416)
chr1 (162-245)||(39582553-39582636)
chr1 (203-252)||(16440471-16440520)
[»] scaffold0322 (1 HSPs)
scaffold0322 (162-309)||(19113-19261)
[»] scaffold0040 (1 HSPs)
scaffold0040 (162-309)||(2061-2209)
[»] scaffold0022 (4 HSPs)
scaffold0022 (162-309)||(162985-163133)
scaffold0022 (158-309)||(163218-163370)
scaffold0022 (165-309)||(162531-162677)
scaffold0022 (162-252)||(69666-69756)
[»] scaffold0557 (1 HSPs)
scaffold0557 (158-253)||(2300-2395)
[»] scaffold0499 (1 HSPs)
scaffold0499 (180-309)||(1920-2050)
[»] scaffold0217 (1 HSPs)
scaffold0217 (161-309)||(457-606)
[»] scaffold1519 (1 HSPs)
scaffold1519 (159-309)||(1549-1700)
[»] scaffold0389 (1 HSPs)
scaffold0389 (160-309)||(13382-13532)
[»] scaffold0277 (1 HSPs)
scaffold0277 (161-309)||(14552-14701)
[»] scaffold0020 (1 HSPs)
scaffold0020 (157-309)||(107309-107462)
[»] scaffold0002 (2 HSPs)
scaffold0002 (165-309)||(154904-155049)
scaffold0002 (162-253)||(154506-154597)
[»] scaffold0018 (1 HSPs)
scaffold0018 (162-309)||(10447-10594)
[»] scaffold0333 (3 HSPs)
scaffold0333 (162-277)||(5199-5315)
scaffold0333 (187-277)||(4739-4830)
scaffold0333 (162-253)||(5326-5418)
[»] scaffold0168 (1 HSPs)
scaffold0168 (162-309)||(2889-3037)
[»] scaffold0047 (2 HSPs)
scaffold0047 (162-309)||(17449-17597)
scaffold0047 (187-309)||(18011-18134)
[»] scaffold0024 (1 HSPs)
scaffold0024 (162-309)||(105867-106015)
[»] scaffold0005 (2 HSPs)
scaffold0005 (175-309)||(245229-245364)
scaffold0005 (174-244)||(245761-245831)
[»] scaffold0442 (1 HSPs)
scaffold0442 (158-231)||(1-74)
[»] scaffold0126 (1 HSPs)
scaffold0126 (201-249)||(37203-37251)
[»] scaffold0065 (1 HSPs)
scaffold0065 (184-234)||(62980-63030)


Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 51330995 - 51331274
Alignment:
Q  17 acaattcacctgtgtgagaaaataaaagtacacggaggtaccacatttgaaagaaaactgtttttaattaatatgatactgtaaatgataatacaaataa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||    
T  51330995 acaattcacctgtgtgagaaaataaaagtacacggaggtaccacatttgaaagaaaactgtttttaattaatatga------------taatacaaataa 51331082  T
Q  117 ataaattatagtactatattgaaagcaatgaatgtatgttgtaagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||| |||||||| || ||||    
T  51331083 ataaattatagtactatattgaaagcaatgaatgtatgttgtaaatgtaacatcctagactacttttaggattgccgactgaccctacaaactaatacga 51331182  T
Q  217 gttttttcagcgtgttttatcctcactcgcacgcttatcgaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | | |||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  51331183 g-tctttcagtgtgttttgtcctcattcgcacgcttatcgaaaatttcccggtaggtcacccatcataagaatactccaagtcaagcacgctt 51331274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 50398383 - 50398531
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||  |||||| ||| ||||||| |||||||| |||||||||||||||||| ||| ||| || |||| |||||||||||||||||| | | |||    
T  50398383 tgtaacatctcagactgctttcaggattgccgactgaccctacaaaccaacacgagtctttccagtgtattttgtcctcactcgcacgcttaccggtaaa 50398482  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  50398483 cttcccggtaggtcacccatcataagaatactccaagtcaagcacgctt 50398531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 50398839 - 50398986
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||| |||||| ||| ||||||| |||||||| |||||||||||||||||| ||| || |||||||| |||||||| ||||| ||| ||  |||    
T  50398839 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtctttccaacgtgttttgtcctcacttgcacgtttaccgggaat 50398938  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  50398939 tccccggtaggtcacccatcataagaatactccaagtcaaacacgctt 50398986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 23943087 - 23943235
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||| || ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  23943087 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 23943186  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||| ||||||| |||  |||| |||||||||||||||||||||    
T  23943187 cttcccggttggtcacccatccaaagactactccaagtcaagcacgctt 23943235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 15268018 - 15268139
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    ||||||| || |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| |||| ||| |||    
T  15268018 tgtaacagccgagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaa 15268117  T
Q  261 tttcccggtaggtcacctatct 282  Q
    ||||||||||| ||||| ||||    
T  15268118 tttcccggtagctcacccatct 15268139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 305
Target Start/End: Original strand, 7678467 - 7678611
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| | ||||||| |||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  7678467 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaacctacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 7678566  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcac 305  Q
     |||||||||||||||| |||  || | | |||||||||||||||    
T  7678567 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcac 7678611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 24629281 - 24629426
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||  |||||| ||| ||||||| |||||||| | |||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||    |    
T  24629281 tgtaacatcacagactgctttcaggattgccgactgaccccacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg--ggt 24629378  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||||||||| |||  || | | |||||||||||||||||||    
T  24629379 ttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 24629426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 1645626 - 1645742
Alignment:
Q  194 actgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaagaatact 292  Q
    |||||| |||||||||||||||||| |||||| |||||||| ||||||||||||||||||   | ||| |||| ||||||||||| |||  |||| ||||    
T  1645626 actgaccctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttacaaagaaacttcctggtaggtcacccatccaaagactact 1645725  T
Q  293 ccaagtcaagcacgctt 309  Q
    |||||||||||||||||    
T  1645726 ccaagtcaagcacgctt 1645742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 9423743 - 9423847
Alignment:
Q  202 tacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtca 300  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||| ||||| | | |||||||||||||||||||| ||| ||||| |||||||| |||    
T  9423743 tacacaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaacgggaaatttcccggtaggtcacccatcctaagactactccaattca 9423842  T
Q  301 agcac 305  Q
    |||||    
T  9423843 agcac 9423847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 44470745 - 44470868
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||| ||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||| | | ||| |||||||||||||| | |||  ||    
T  44470745 attgttgactgaccctacaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaaccatcccaa 44470844  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
     | | |||||||||||||||||||    
T  44470845 aattgctccaagtcaagcacgctt 44470868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 44471195 - 44471318
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| |||||||||||||||||| ||| |||| |||||| ||||||||||| |||||| | | |||||||||||||||||||| |||  ||    
T  44471195 attgtcgactgaccctacaaaccaacacgagtctttccagcatgttttgtcctcactcgcccgcttaccgggaaatttcccggtaggtcacccatcccaa 44471294  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
     | | |||||| ||||||||||||    
T  44471295 aattgctccaaatcaagcacgctt 44471318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 309
Target Start/End: Complemental strand, 21067987 - 21067878
Alignment:
Q  201 ctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtc 299  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||| ||| | | ||| |||||||||||||||| |||  |||| |||| ||||||    
T  21067987 ctacaaaccaacacgaattttttcagtgtgttttgtcctcactcgcacgtttaccggtaaacttcccggtaggtcacccatccaaagactacttcaagtc 21067888  T
Q  300 aagcacgctt 309  Q
    ||||||||||    
T  21067887 aagcacgctt 21067878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 3169469 - 3169353
Alignment:
Q  194 actgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaagaatact 292  Q
    |||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||| | | ||| || | ||||||||||  |||  |||| ||||    
T  3169469 actgaccctacaaaccaacacgagtattttcaacgtgttttgtcctcactcgcacgcttaccaagaaactttctggtaggtcactcatccaaagactact 3169370  T
Q  293 ccaagtcaagcacgctt 309  Q
    |||||||||||||||||    
T  3169369 ccaagtcaagcacgctt 3169353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 21067577 - 21067429
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| ||||   ||| || ||||| ||||||| | |||||| ||||||||| ||||||| ||||||| ||| |||||||||||||| ||| |||    
T  21067577 tgtaacatcccagacgactttaagcattgtggactgacccaacaaactaacacgagtcttttcagtgtgttttgtccccactcgcacgcttaccgagaaa 21067478  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || |||||||||||||  ||  |||| |||||||||||||||||||||    
T  21067477 ctttccggtaggtcacccctccaaagactactccaagtcaagcacgctt 21067429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 4127263 - 4127354
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||| ||| |||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  4127263 tgtaacattctaaactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgctta 4127354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 309
Target Start/End: Original strand, 23350127 - 23350276
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aa 259  Q
    |||||||| || |||||| ||| || |||| |||||||| | |||||||||||||||| ||||||| ||||||| ||||||||| ||||||||  || ||    
T  23350127 gtgtaacaccccagactgctttcagaattgccgactgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcacacgcttacagagaa 23350226  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | ||| |||||||||| | |||  || | | |||||||||||||||||||    
T  23350227 acttctcggtaggtcatccatcccaaaattgctccaagtcaagcacgctt 23350276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 7381537 - 7381449
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtc 274  Q
    |||| |||||||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||| | ||||| ||| |||||||||    
T  7381537 attgccgactgaccctacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttctcggtaggtc 7381449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 13266381 - 13266233
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| | |||| ||| |||||||||||||||| | |||||||||||| ||| |||||| | |||||| ||||||||||||| ||| || |||||    
T  13266381 tgtaacatcccatactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcaacatgttttctcctcactcgcacacttttcggaaaa 13266282  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||   |||||||| ||| ||| | | ||| |||||||||||||||    
T  13266281 cttcccaaaaggtcacccatcctaaaatttctcaaagtcaagcacgctt 13266233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 49998931 - 49998783
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||| || | |||| ||| || |||| |||||| | | |||||||||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  49998931 tgtaacaccccaaactgctttcagaattgccgactgtccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 49998832  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | ||||||||||| |||||||    
T  49998831 cttcccggtaggtcacccatcccaaaattgctccaagtcaaacacgctt 49998783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 35477955 - 35477868
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||||||||| | |||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  35477955 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctctctcgcacg 35477868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 35871900 - 35871774
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatct 282  Q
    ||||||| |||||||  | |||||||||||||||| ||||||||||||||| |||||||||||||| ||| | | ||| || ||| ||||||||| |||     
T  35871900 aggattgccgactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccgataggtcacccatcc 35871801  T
Q  283 taagaatactccaagtcaagcacgctt 309  Q
     || | | |||||||||||||||||||    
T  35871800 caaaattgctccaagtcaagcacgctt 35871774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 23942673 - 23942782
Alignment:
Q  201 ctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacctatcttaagaatactccaagtc 299  Q
    ||||||||||||||| ||  ||||| |||||||| |||||||||||||||||| | | ||| || ||||||||||| | |||  |||| |||||||||||    
T  23942673 ctacaaaccaacacgggtcctttcaacgtgttttgtcctcactcgcacgcttatttggaaactttccggtaggtcatccatccaaagactactccaagtc 23942772  T
Q  300 aagcacgctt 309  Q
    ||||||||||    
T  23942773 aagcacgctt 23942782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 309
Target Start/End: Original strand, 14572012 - 14572147
Alignment:
Q  175 actgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggt 273  Q
    |||| ||| ||||||| |||||||| |  ||||||||||||||| |||||| |||||||| ||||||||| |||||||  ||| ||| ||||| | ||||    
T  14572012 actgctttcaggattgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggt 14572111  T
Q  274 cacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||| |||| || | | ||| |||||||||||||||    
T  14572112 cacccatctcaaaattgctctaagtcaagcacgctt 14572147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 40607201 - 40607110
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacc 277  Q
    |||| ||||||| || ||||| ||||||||||||||||||||| |||| |||||||||| ||||||| ||| ||| || |||||||||||||    
T  40607201 attgccgactgattccacaaatcaacacgagttttttcagcgtattttgtcctcactcgaacgcttaccgataaactttccggtaggtcacc 40607110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 4414257 - 4414323
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||| |||||||| |||||||||||||||||| ||||||| ||||||| |||| |||||||||||||    
T  4414257 attgccgactgaccctacaaaccaacacgagtcttttcagtgtgttttgtcctgactcgcacgctta 4414323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 5810111 - 5810039
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||| ||||| || | ||||| ||||| |||| ||||||||||||||||||||||||| |||||||    
T  5810111 ttttaggattgccgactaaccccacaaatcaacatgagtcttttcagcgtgttttatcctcactcacacgctt 5810039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 4127775 - 4127850
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacc 277  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||||||| | ||||| ||  ||||||||||||    
T  4127775 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttttcggtaggtcacc 4127850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 29628524 - 29628582
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcg 245  Q
    |||| |||||||  ||||||| ||||||||||||||||||||| |||||||||||||||    
T  29628524 attgccgactgatcctacaaatcaacacgagttttttcagcgtattttatcctcactcg 29628582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 1464439 - 1464355
Alignment:
Q  164 taacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||||||| |||||| |||||||||| ||||| ||| | ||||| |||||||||| ||||||||||||| | |||| |||||||||    
T  1464439 taacatcccagactgcttttaggattatcgaccgaccccacaaatcaacacgagt-ttttcagcgtgttgtgtcctaactcgcacg 1464355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 50399399 - 50399334
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagc 227  Q
    |||||||||  |||||| ||| ||||||| |||||||| |||||||||||||||||| ||||||||    
T  50399399 tgtaacatcgcagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttttcagc 50399334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 27578170 - 27578218
Alignment:
Q  201 ctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  27578170 ctacaacccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 27578218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 27578324 - 27578392
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||| ||||||  | |||||||| ||||||| ||||| ||||||||| |||||||||||||||||    
T  27578324 aggattgttgactgatcccacaaaccatcacgagtcttttctgcgtgttttgtcctcactcgcacgctt 27578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 8467690 - 8467748
Alignment:
Q  194 actgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||| | |||||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  8467690 actgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgctt 8467748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 14571545 - 14571615
Alignment:
Q  174 gactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactc 244  Q
    ||||| ||| ||||||  |||||||| | |||||||||||||||| |||||| |||||||| |||||||||    
T  14571545 gactgctttcaggattcccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactc 14571615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 12691907 - 12691992
Alignment:
Q  225 agcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||| |||||||||||||||||| | | ||| ||||| |||||||||| |||  || | | |||||||||||||||||||    
T  12691907 agcgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgctt 12691992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 53996000 - 53996053
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctc 240  Q
    |||||| |||||| |||||||||||||||||| |||||| |||||||| |||||    
T  53996000 attgtccactgaccctacaaaccaacacgagtcttttcaacgtgttttgtcctc 53996053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 33294759 - 33294823
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    |||||||| || |||| |||||| ||||||||||| ||||||||||||||| | |||||| ||||    
T  33294759 aggattgtagattgacgctacaacccaacacgagtcttttcagcgtgttttgttctcacttgcac 33294823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 50399317 - 50399269
Alignment:
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgcttc 310  Q
    ||||| |||||||||| ||| |||||||||||||||||| |||||||||    
T  50399317 ttcccagtaggtcacccatcataagaatactccaagtcaggcacgcttc 50399269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 50814730 - 50814818
Alignment:
Q  222 ttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||||||||| |||||||||||||| ||| | | ||| |||||||||||||| | |||  || | | |||||||||||||||||||    
T  50814730 ttcagcgtgttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcatccatcccaaaattgctccaagtcaagcacgctt 50814818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 33987019 - 33987066
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    |||||||||||| || |||||||||||| |||| ||||||||||||||    
T  33987019 attgtcgactgattccacaaaccaacacaagttctttcagcgtgtttt 33987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 27026756 - 27026707
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||| ||||||||| ||||||||||||||| |||||| || |||||||    
T  27026756 acaaacaaacacgagtcttttcagcgtgttttttcctcagtcacacgctt 27026707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 27578783 - 27578844
Alignment:
Q  191 tcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||| |||| ||||||| |||||| ||| |||||||| || ||| |||||||||||||||||    
T  27578783 tcgattgaccctacaaatcaacacaagtcttttcagcatgatttgtcctcactcgcacgctt 27578844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 13265931 - 13265859
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    |||||||||  |||||| ||| ||||||  ||||||||   |||||| ||||||||| |||||||||||||||    
T  13265931 tgtaacatctcagactgctttcaggattaccgactgaccgcacaaactaacacgagtcttttcagcgtgtttt 13265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 31817005 - 31817073
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||| || | | |||||||| ||||||| |||||| | |||||| |||||||||| ||||||    
T  31817005 aggattgtcgattggccccacaaaccagcacgagtcttttcaacatgttttgtcctcactcgtacgctt 31817073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 42788493 - 42788645
Alignment:
Q  158 taagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga 257  Q
    |||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||| || ||||||||||||||| |||||||||||| ||||| |||    
T  42788493 taagtgtaacatcccagactgctttcaggattgtcgactgactccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcaagcttaccga 42788592  T
Q  258 -aaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||| ||||||||||||||||||||  || | | |||||||||||||||||||    
T  42788593 gaaacttcccggtaggtcacctatcccaaaattgctccaagtcaagcacgctt 42788645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 8641886 - 8642033
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| |||    
T  8641886 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaa 8641985  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||| |||||||||| ||||||| | | |||||||||||||||||||    
T  8641986 cttccc-gtaggtcacccatcttaaaattgctccaagtcaagcacgctt 8642033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 34372363 - 34372215
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||| | |||||| ||| ||||||| |||||||| | | |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  34372363 tgtaacattccagactgctttcaggattgccgactgacgccataaaccaacacgagtattttcagcgtgttttttcctcactcgcacgcttatcggaaaa 34372264  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  34372263 cttcccggtaggtcaccaatcccaaaattgctccaagtcaagcacgctt 34372215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 17445324 - 17445454
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacct 278  Q
    |||||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | ||| ||||||||||||||||     
T  17445324 ttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaccc 17445423  T
Q  279 atcttaagaatactccaagtcaagcacgctt 309  Q
    |||  || | | |||||||||||||||||||    
T  17445424 atcccaaaattgctccaagtcaagcacgctt 17445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 2474700 - 2474552
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||| ||| |||||| ||||||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||| ||||| | | |||    
T  2474700 tgtaacgtcccagactgcttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttttcctcactcgcatgcttaccgggaaa 2474601  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || ||||||||||||| |||| || | | |||||||||||||||||||    
T  2474600 ctttccggtaggtcacccatctcaaaattgctccaagtcaagcacgctt 2474552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 3886908 - 3887056
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| || |||||||||||| |||||||||||||||||| | | |||    
T  3886908 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcgcacgcttactgggaaa 3887007  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||| |||||||||| |||  || | | |||||||||||||||||||    
T  3887008 cttcccagtaggtcacccatccaaaaattgctccaagtcaagcacgctt 3887056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 34371907 - 34371759
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| |||||| |||||||| |||||||||||||||||| | | |||    
T  34371907 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgggaaa 34371808  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||| |||||||||| |||  || | | |||||||||||||||||||    
T  34371807 cttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgctt 34371759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 3886449 - 3886568
Alignment:
Q  159 aagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcga 257  Q
    ||||||||||||| ||| || ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | |     
T  3886449 aagtgtaacatcccagaatgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactggg 3886548  T
Q  258 aaatttcccggtaggtcacc 277  Q
    ||| ||||||||||||||||    
T  3886549 aaacttcccggtaggtcacc 3886568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 10927272 - 10927399
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggtcacct 278  Q
    |||| ||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||| || |||||||| || |||| |||||||| |||||||     
T  10927272 ttttgggattgtcgaccgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgaaaaacttcccggtcggtcaccc 10927371  T
Q  279 atcttaagaatactccaagtcaagcacg 306  Q
    |||  |||| ||||||||||||||||||    
T  10927372 atccaaagactactccaagtcaagcacg 10927399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 1822202 - 1822053
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| ||||   ||| || ||||| ||| ||| |||||||||||||||||| ||||||||||||||| |||||| || |||||||| | | ||    
T  1822202 gtgtaacatcccagacgactttaagcattgttgaccgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgggaa 1822103  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||| |||  |||| |||||||||||||||||||||    
T  1822102 acttcccggtaggtcacccatccaaagactactccaagtcaagcacgctt 1822053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 22557243 - 22557116
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagt-tttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatc 281  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||||| | | ||| |||||||||||||||| |||    
T  22557243 aggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatc 22557144  T
Q  282 ttaagaatactccaagtcaagcacgctt 309  Q
      || | | |||||||||| ||||||||    
T  22557143 ccaaaattgctccaagtcaggcacgctt 22557116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 2474243 - 2474153
Alignment:
Q  163 gtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||||||| | |||| ||||||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  2474243 gtaacatcccatactgcttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctta 2474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 8391202 - 8391321
Alignment:
Q  191 tcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaagaat 289  Q
    ||||||||| | ||||| |||||||||| || |||||||||||| |||||||||||||| ||||||| ||| |||||||||||||||| |||  || | |    
T  8391202 tcgactgaccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcgcacgtttatcgagaaacttcccggtaggtcacccatcccaaaatt 8391301  T
Q  290 actccaagtcaagcacgctt 309  Q
     |||||||||||||||||||    
T  8391302 gctccaagtcaagcacgctt 8391321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 22556810 - 22556715
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagt-tttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacc 277  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||| ||| |||| |||||||||||    
T  22556810 aggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctggtaggtcacc 22556715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 29679983 - 29680106
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||| |||||| | ||||||||||| | ||| ||| ||| |||||||| |||  ||    
T  29679983 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcatttgcacgcttatcgggaaacttctcggaaggtcacccatccaaa 29680082  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || ||||||||||||| |||||||    
T  29680083 gactactccaagtcaaacacgctt 29680106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 2194099 - 2194008
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||||| |||||| ||| || ||||||||||||| | ||||||||||||| || ||||||||||||||| ||||||||||||| ||||    
T  2194099 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacactta 2194008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 30720110 - 30720201
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||| |||||| ||| | ||||||||| |||||| ||||||||||| |||| ||||||||||||||| ||||| |||||||||||    
T  30720110 gtgtaacatcccagactgctttcaagattgtcgattgactccacaaaccaacaggagtcttttcagcgtgttttgtcctcgctcgcacgctt 30720201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 275
Target Start/End: Original strand, 15512863 - 15512977
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||| |||| |||||| ||| ||||||| |||||||| | |||||||||||||||| |||||| ||| |||| |||||||||||||||||| | | |||    
T  15512863 tgtaatatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtattttgtcctcactcgcacgcttaccgggaaa 15512962  T
Q  261 tttcccggtaggtca 275  Q
     ||||||||||||||    
T  15512963 cttcccggtaggtca 15512977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 189363 - 189215
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||  ||| |||||||  ||||||  | |||||||||||||||| ||||||||||||||| |||||||||||||| ||| | | |||    
T  189363 tgtaacatcccagactactttcaggattgcggactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaa 189264  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || ||||||||||||| |||  || | | |||||||||||||| ||||    
T  189263 ctttccggtaggtcacccatcccaaaattgctccaagtcaagcatgctt 189215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 309
Target Start/End: Original strand, 27646716 - 27646834
Alignment:
Q  192 cgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacctatcttaagaata 290  Q
    ||||||||  |||||||||||| |||| |||||||| |||||| |||||||||||||| ||| | | ||| |||||||||||||||| ||   |||| ||    
T  27646716 cgactgaccatacaaaccaacatgagtcttttcagcatgttttgtcctcactcgcacgtttattgggaaacttcccggtaggtcacccatgcaaagacta 27646815  T
Q  291 ctccaagtcaagcacgctt 309  Q
    ||||||| |||||||||||    
T  27646816 ctccaagacaagcacgctt 27646834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 305
Target Start/End: Original strand, 20039327 - 20039470
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||||||||   ||| || |||| | ||||| || ||||||||||| |||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20039327 tgtaacatcctagacgactttaagcattgccaactga-tcaacaaaccaacatgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20039425  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcac 305  Q
     |||||  ||||||||| |||  |||| ||||| |||||||||||    
T  20039426 cttcccaataggtcaccaatccaaagactactctaagtcaagcac 20039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 1880346 - 1880280
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  1880346 attgtcgacggaccttacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgctcgctta 1880280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 21883938 - 21884008
Alignment:
Q  164 taacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    |||||||| |||||| ||| | |||||||||||||| | |||||||||||||||| |||||||||||||||    
T  21883938 taacatcccagactgctttcaagattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 21884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 187810 - 187762
Alignment:
Q  205 aaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  187810 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctta 187762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 11757145 - 11757253
Alignment:
Q  175 actgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggt 273  Q
    |||| ||||||||||| |||||||| |  |||||||||| |||| |||| ||||  |||  ||||||||| |||||||| || |||||||||||||||||    
T  11757145 actgcttttaggattgccgactgaccccgcaaaccaacaagagtcttttaagcggatttcgtcctcactcacacgcttaccgaaaaatttcccggtaggt 11757244  T
Q  274 cacctatct 282  Q
    |||| ||||    
T  11757245 cacccatct 11757253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 20858393 - 20858509
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| | |||  ||| ||||||||||||||||   ||||| |||||||||| ||||||||||||||| |||||||| ||| |||| || |||||    
T  20858393 tgtaacatcccaaacttctttcaggattgtcgactgacctaacaaatcaacacgagtattttcagcgtgttttgtcctcactagcatgcttttcagaaaa 20858492  T
Q  261 tttcccggtaggtcacc 277  Q
     ||||| | ||||||||    
T  20858493 cttcccagaaggtcacc 20858509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 24182119 - 24182183
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    ||||||||||||| || | |||||||||||||| | |||||| ||||||||||||||||||||||    
T  24182119 aggattgtcgactaaccccacaaaccaacacgaatcttttcaacgtgttttatcctcactcgcac 24182183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 38063705 - 38063795
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacc 277  Q
    |||||||| |||| ||||| ||||||||||| ||||||||||| |||| |||||| ||||||||||| | ||||| ||||| ||||||||||    
T  38063705 attgtcgaatgaccctacacaccaacacgag-tttttcagcgtattttgtcctcattcgcacgcttaccggaaaacttcccagtaggtcacc 38063795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 39147227 - 39147086
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||| ||||   ||| || |||| ||| |||| ||||||||||||| |||| |||  ||||| |||| ||||| ||||||||||||       |    
T  39147227 tgtaacatcccagacgactttaagcattgccgattgaccctacaaaccaacatgagtctttctagcgttttttgtcctctctcgcacgcttac------t 39147134  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||| |||||||||| ||| || || |||||||||||||||||||||    
T  39147133 ttcccagtaggtcacccatcatacgactactccaagtcaagcacgctt 39147086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 30684861 - 30684952
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||  | |||| ||| | ||||| ||| |||| | |||||||||||||||| ||||||||||||||| ||||| || ||||||||    
T  30684861 gtgtaacatctcaaactgctttcaagattgccgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcgcttgcacgctt 30684952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 18750072 - 18750133
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    ||||| ||||||| | |||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  18750072 attgttgactgaccccacaaaccaactcgagtcttttcagtgtgttttgtcctcactcgcac 18750133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 18304708 - 18304640
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    ||||||||||| |  ||||| | | ||| |||||||||||| ||||||||||||| |||||||||||||    
T  18304708 ttttaggattgccatctgaccccagaaatcaacacgagtttgttcagcgtgttttgtcctcactcgcac 18304640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 8366730 - 8366645
Alignment:
Q  191 tcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacc 277  Q
    ||||||||| |||||||||||||||||| |||||| |||||||| || |||||| | |||||| | ||||| ||||| ||||||||||    
T  8366730 tcgactgac-ctacaaaccaacacgagtcttttcaacgtgttttgtcgtcactcac-cgcttattggaaaacttcccagtaggtcacc 8366645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 10926871 - 10926942
Alignment:
Q  236 tcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacg 306  Q
    ||||||||| |||||||| | | ||| |||||||||||||||| |||  |||| ||||||||||||||||||    
T  10926871 tcctcactcacacgcttaccaggaaacttcccggtaggtcacccatccaaagactactccaagtcaagcacg 10926942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 4673342 - 4673406
Alignment:
Q  170 cctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    ||||||||||||||| |||||||||||||| | ||||| |||||  |||||| ||| | ||||||    
T  4673342 cctagactgtttttaagattgtcgactgacccaacaaatcaacataagttttctcaacttgtttt 4673406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 5066781 - 5066837
Alignment:
Q  204 caaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaa 260  Q
    |||||||||| || | ||||||||||||||| || ||||||||||| ||||| ||||    
T  5066781 caaaccaacatgaatcttttcagcgtgttttgtcttcactcgcacgtttatcaaaaa 5066837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 30719654 - 30719746
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||||  |||||||||||||||||| ||| |||| | |||||  || |||||| |||| ||  |||||| | ||| |||||||||||    
T  30719654 agtgtaacatctaagactgtttttaggattggcgattgaccccacaaattaatacgagtctttttagtatgttttgttctctctcgcacgctt 30719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 162 - 301
Target Start/End: Complemental strand, 33175251 - 33175112
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||| |||||| ||| ||||||| |||||||| |||||||| ||||||||| ||| ||||||||||| |||||||||||||||||| ||  |||    
T  33175251 tgtaacatcccagactgctttcaggattgccgactgaccctacaaactaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccgggaat 33175152  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaa 301  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  33175151 ttcccggtaggtcacccatcataagaatactccaagtcaa 33175112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 32377578 - 32377715
Alignment:
Q  173 agactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtag 271  Q
    |||||| ||||||||||| |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| || |||||||    
T  32377578 agactgcttttaggattgccgactgaccccacaaaccaacacgagttttttcagcgtgttttgtcctcactcgcacgcttaccggaaaactttccggtag 32377677  T
Q  272 gtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||||||  || | | |||||||||||||| ||||    
T  32377678 gtcacctatcccaaaattgctccaagtcaagcatgctt 32377715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 30966985 - 30966837
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||||| |||||||||||||||| |||||| |||||||| |||||||||||||||||| ||| |||    
T  30966985 tgtaacatcccagactgctttcaggattgccgactgactccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaa 30966886  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||| ||||||||||    
T  30966885 cttcccggtaggtcacccatcccaaaattgctccaagttaagcacgctt 30966837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 16379207 - 16379084
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||  || ||| |||||| ||||||||| |||  ||    
T  16379207 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacccggaaacttcccgataggtcacccatccaaa 16379108  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  16379107 gactactccaagtcaagcacgctt 16379084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 15640030 - 15639881
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aa 259  Q
    ||||||||||| ||||   ||| || |||| |||||||| |||| ||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||    
T  15640030 gtgtaacatcccagacgactttaagcattgccgactgaccctaccaaccaacacgagtcttttctgcgtgttttgtcctcactcgcacgcttatcgagaa 15639931  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | ||||| |||||||||| |||  |||| |||||||||||||||||||||    
T  15639930 acttcccagtaggtcacccatccaaagactactccaagtcaagcacgctt 15639881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 1912819 - 1912671
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| ||||   ||| || |||| ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||| |||    
T  1912819 tgtaacatcccagacgactttaagcattgccgactgactctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaa 1912720  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||| ||| |||  |||| ||||||||||||| |||||||    
T  1912719 cttcccggtaggtaacccatccaaagagtactccaagtcaatcacgctt 1912671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 5399668 - 5399816
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||||||||| ||| ||| ||||||||||| | |||||||||||||||| | |||||    
T  5399668 tgtaacatcccagactgcttttaggattgtcgactgaccccacaaaccaacacaagtctttccagcgtgttttgttctcactcgcacgcttaccggaaaa 5399767  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||| ||||||||||| |||  || | | |||||||||||||||||||    
T  5399768 cttcctggtaggtcacccatcccaaaatttctccaagtcaagcacgctt 5399816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 25337848 - 25337996
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||  |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  25337848 tgtaacatctcagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 25337947  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  25337948 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 25337996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 32377758 - 32377906
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | |||||    
T  32377758 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaa 32377857  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||| |||| ||||| |||  || | | ||||||||||| |||||||    
T  32377858 cttcccagtagatcacccatcccaaaattgctccaagtcaaacacgctt 32377906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 16379663 - 16379540
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggtcacctatcttaa 285  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||  |  ||| |||||||||||||||| |||  ||    
T  16379663 attgtcgaatgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacagtgaaacttcccggtaggtcacccatccaaa 16379564  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || ||||||||||||| |||||||    
T  16379563 gattactccaagtcaaacacgctt 16379540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 30966527 - 30966381
Alignment:
Q  164 taacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatt 262  Q
    |||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| |||||| |||||||| |||||||||||| ||||| ||| ||| |    
T  30966527 taacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgagaaact 30966428  T
Q  263 tcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||||||||||| |||  || | |  ||||||||||||||||||    
T  30966427 tcccggtaggtcacccatcccaaaattggtccaagtcaagcacgctt 30966381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 24818620 - 24818473
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||||||  ||||  ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  24818620 tgtaacatccccgactactttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaa 24818521  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  24818520 cttcccggtaggtcacccatc-caaaattgctccaagtcaagcacgctt 24818473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 33174772 - 33174650
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaatttcccggtaggtcacctatcttaag 286  Q
    ||||||||||||| |||||||| |||||| || |||  ||| |||||| |||| ||||||||||||| ||  |||||||||||| |||||| ||| ||||    
T  33174772 attgtcgactgaccctacaaacaaacacgggtctttctagcatgttttttcctaactcgcacgcttaccgggaatttcccggtatgtcacccatcataag 33174673  T
Q  287 aatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||||||||    
T  33174672 actactccaagtcaagcacgctt 33174650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 15620149 - 15620045
Alignment:
Q  206 aaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaagaatactccaagtcaagca 304  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||| ||| ||| ||||| |||||||||| |||  |||| ||||| ||||||||||    
T  15620149 aaccaacacgagtcttttcagcgagttttgtcctcactcgcacgcttaccgagaaacttcccagtaggtcacccatccaaagactactcaaagtcaagca 15620050  T
Q  305 cgctt 309  Q
    |||||    
T  15620049 cgctt 15620045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 25433932 - 25434055
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    |||| |||||||| |||||||||||||||| | ||||||||||||||| |||| |||| |||||||| | ||||| ||||| || ||||||| |||  ||    
T  25433932 attgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtccttactcacacgcttaccagaaaacttccctgttggtcacccatccaaa 25434031  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    ||  ||||||||||||||||||||    
T  25434032 gaccactccaagtcaagcacgctt 25434055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 309
Target Start/End: Complemental strand, 33771298 - 33771148
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaa 258  Q
    |||||||||||| ||| || ||| || |||| || ||||| | |||||||||||||||| ||||||| ||||||| |||||||||||| ||||| | | |    
T  33771298 agtgtaacatcccagattgctttcagaattgccggctgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcatgcttaccggga 33771199  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||| |||  || | | |||||||||||||| ||||    
T  33771198 aacttcccggtaggtcacccatcccaaaattgctccaagtcaagcatgctt 33771148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 11389760 - 11389687
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  11389760 ttttaggattgtcgactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcgcatgctta 11389687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 11406421 - 11406348
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  11406421 ttttaggattgtcgactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcgcatgctta 11406348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 8181238 - 8181328
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacc 277  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||||| |||||||| ||||| ||||| ||||| ||||| ||||||||||    
T  8181238 attgtcgactgac-ctgcaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacgtttatcggaaaacttcccagtaggtcacc 8181328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 8256776 - 8256673
Alignment:
Q  207 accaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcac 305  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||||| ||||| ||||| | |||||||| |||  || | | |||||||||||||||    
T  8256776 accaacatgagtcttttcagcgtattttgtcctcactcgcacgcttatcggaaaacttcccagcaggtcacccatcccaaaattgctccaagtcaagcac 8256677  T
Q  306 gctt 309  Q
    ||||    
T  8256676 gctt 8256673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 29259512 - 29259619
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaa 301  Q
    |||||||||||||||| |||||| |||||||| |||||||||||| ||||| | | ||| |||||||||||||||| |||  || | | ||| |||||||    
T  29259512 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctcaaagtcaa 29259611  T
Q  302 gcacgctt 309  Q
    ||||||||    
T  29259612 gcacgctt 29259619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 36924362 - 36924421
Alignment:
Q  192 cgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgct 251  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  36924362 cgactaactctacaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgct 36924421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 20502234 - 20502172
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||| |||||||| |||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  20502234 attgccgactgaccctacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacg 20502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 27882818 - 27882925
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggtcacctatcttaagaatactccaagtcaa 301  Q
    ||||||||||| || | ||||||||||||||| |||| ||| |||| |||| || |||| ||| | ||||||||||||||  |||| |||||||||||||    
T  27882818 acaaaccaacaagattcttttcagcgtgttttgtcctgacttgcacacttaccgaaaaacttctcagtaggtcacctatccaaagactactccaagtcaa 27882917  T
Q  302 gcacgctt 309  Q
     |||||||    
T  27882918 acacgctt 27882925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 29804942 - 29804871
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttt 233  Q
    |||||||||| |||||| ||| || ||||||||||||  | |||||||||||||||| ||||||||||||||    
T  29804942 tgtaacatcccagactgctttcagcattgtcgactgatcccacaaaccaacacgagtcttttcagcgtgttt 29804871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 30963114 - 30963204
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||| | |||| ||| | ||||| ||| ||||   |||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  30963114 tgtaacatccaaaactgctttcatgattgccgattgacctcacaaaccaacacgagtcttttcaacgtattttatcctcactcgcacgctt 30963204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 37552833 - 37552775
Alignment:
Q  189 tgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgca 247  Q
    ||||||||||| ||||||||||||||| || |||| |||||||||| |||||| |||||    
T  37552833 tgtcgactgaccctacaaaccaacacgggtattttaagcgtgttttttcctcaatcgca 37552775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 305
Target Start/End: Complemental strand, 13191245 - 13191125
Alignment:
Q  186 gattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatctta 284  Q
    |||||||||||||||| | |||||||||| ||| |||| |||||||||| ||| || || ||||||| | || ||| || || | ||||||||||||| |    
T  13191245 gattgtcgactgactccataaaccaacactagtctttttagcgtgttttgtccgcattcacacgctttttgagaaactttccagaaggtcacctatctca 13191146  T
Q  285 agaatactccaagtcaagcac 305  Q
    | | | || ||||||||||||    
T  13191145 aaatttcttcaagtcaagcac 13191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 301
Target Start/End: Complemental strand, 1707336 - 1707196
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||| || |||| |||||||| ||| ||| |||| ||| | |||| |||||||||| |  ||||||||||||||| | | |||    
T  1707336 tgtaacatcccagacgactttaagcattgccgactgaccctataaatcaacgcgaatctttttagcgtgttttgtattcactcgcacgcttaccgggaaa 1707237  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaa 301  Q
     |||| ||||||||||| |||  |||| |||| ||||||||    
T  1707236 cttcctggtaggtcacccatccaaagactacttcaagtcaa 1707196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 38898867 - 38898911
Alignment:
Q  265 ccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||||||||||  |||| ||||| |||||||||||||||    
T  38898867 ccggtaggtcacctatccaaagactactctaagtcaagcacgctt 38898911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 162 - 305
Target Start/End: Complemental strand, 32292236 - 32292092
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  32292236 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 32292137  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcac 305  Q
     |||||||||||||||| |||  |||| |||||||||||||||||    
T  32292136 cttcccggtaggtcacccatccaaagactactccaagtcaagcac 32292092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 27022190 - 27022337
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||||||||||||| |||| |||||||||| |||||||||||||||||| | ||||     
T  27022190 tgtaacatcccagactgcttttaggattgtcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttaccaaaaac 27022289  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || || |||||||||| |||  || | | |||||||||||||||||||    
T  27022290 tttccagtaggtcacccatcccaaaattgctccaagtcaagcacgctt 27022337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 21315961 - 21316076
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||| |||||| ||||||||||||||| |||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| || |||     
T  21315961 tgtaacatcccagactgcttttaggattgtcgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaac 21316060  T
Q  262 ttcccggtaggtcacc 277  Q
    ||| ||||||||||||    
T  21316061 ttcgcggtaggtcacc 21316076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 25148261 - 25148114
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||  | |||| |||||||||||||||||||| | |||||||||||||||| |||||||||||||||  ||||||||||||| |||||| |||     
T  25148261 tgtaacatctcatactgcttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgacctcactcgcacgtttatcggaaac 25148162  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||||||||| |||  || | | ||| |||||||||||||||    
T  25148161 ttcccggtaggtcacccatcccaaaattgctcaaagtcaagcacgctt 25148114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 10844466 - 10844614
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| ||||   |||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||| ||||| ||| |||    
T  10844466 tgtaacatcccagacgacttttaggattgtcgactgaccctacaaacaaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaaa 10844565  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | || ||||||||||||||||    
T  10844566 cttcccggtaggtcacccatcccaaaattgcttcaagtcaagcacgctt 10844614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 22548400 - 22548548
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaa 260  Q
    |||||||||| | |||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  22548400 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaa 22548499  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  22548500 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 22548548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 22548846 - 22548994
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaa 260  Q
    |||||||||| | |||| ||| ||||||| |||||||| | |||||||||||||||| | |||||||||||||||||||||||||||||||| | | |||    
T  22548846 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttactgggaaa 22548945  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  22548946 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 22548994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 17103377 - 17103228
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| ||||   |||||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||  |||    
T  17103377 tgtaacatcccagacgacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 17103278  T
Q  261 tttcccggtaggtca-cctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||| || |||  || | | |||||||||||||||||||    
T  17103277 cttcccggtaggtcaacccatcccaaaattgctccaagtcaagcacgctt 17103228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 32292699 - 32292544
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaa-------ccaacacgagttttttcagcgtgttttatcctcactcgcacgcttat 254  Q
    |||||||||| |||||| ||||||||||| |||||||| |||||||       ||||||||||| ||||||||||||||| ||||||||| ||||||||     
T  32292699 tgtaacatcccagactgcttttaggattgccgactgaccctacaaagtacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttac 32292600  T
Q  255 c-gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | ||||| |||||||||| ||||| |||  |||| |||||||||||||||||||||    
T  32292599 cggaaaacttcccggtagatcacccatccaaagactactccaagtcaagcacgctt 32292544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 8080218 - 8080341
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||| ||||  |||||| ||| |||  ||    
T  8080218 attgtcgactggccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctagtaggttacccatccaaa 8080317  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  8080318 gactactccaagtcaagcacgctt 8080341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 2044322 - 2044205
Alignment:
Q  193 gactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatac 291  Q
    ||||||| ||||||||||| |||||| ||||||||||||||| |||||||||||||||||| | ||||| |||||  ||||||||| |||  |||| |||    
T  2044322 gactgaccctacaaaccaatacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttcccattaggtcacccatccaaagactac 2044223  T
Q  292 tccaagtcaagcacgctt 309  Q
    ||||||||||||||||||    
T  2044222 tccaagtcaagcacgctt 2044205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 306
Target Start/End: Complemental strand, 25147830 - 25147686
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||| || |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| | |||||||||||||||||| | |||    
T  25147830 tgtaacacccaagactgctttcaggattgccgactgaccc-acaaaccaacacgagtcttttcagcgtgttttgtactcactcgcacgcttatcaggaaa 25147732  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacg 306  Q
     |||||||||||||||| |||  || | | ||||||||||||||||    
T  25147731 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacg 25147686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 12827105 - 12827253
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| |||||||||||||||| | |||||||||||||||| |||| |  |||||||| |||||||||||| |||| | | |||    
T  12827105 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacgagtcttttaaaagtgttttaacctcactcgcacacttaccgggaaa 12827204  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  12827205 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 12827253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 34308330 - 34308478
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||| ||||||| ||||||||||||||| ||||||||| || ||||| | | |||    
T  34308330 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaa 34308429  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||| || | | ||||||| |||||||||||    
T  34308430 cttcccggtaggtcacccatctcaaaattgctccaagccaagcacgctt 34308478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 34308786 - 34308934
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| |||||||  ||||||| | |||||||||||||||| ||||||||||||||| ||||||||| || ||||| | | |||    
T  34308786 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaa 34308885  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||| || | | ||||||| |||||||||||    
T  34308886 cttcccggtaggtcacccatctcaaaattgctccaagccaagcacgctt 34308934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 12100960 - 12100838
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga--aaatttcccggtaggtcacctatctta 284  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||  ||| |||||||||||||||| |||  |    
T  12100960 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctta-cgaggaaacttcccggtaggtcacccatc-ca 12100863  T
Q  285 agaatactccaagtcaagcacgctt 309  Q
    | | | |||||||||||||||||||    
T  12100862 aaattgctccaagtcaagcacgctt 12100838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 22026675 - 22026526
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgcttatc-gaaa 259  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||| ||| |||| |||||||||||||||||| | | ||    
T  22026675 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagtgtgtttttgtcctcactcgcacgcttaccgggaa 22026576  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||| ||||| ||| |||  || | | |||||||||||||||||||    
T  22026575 acttcccgataggttacccatcccaatattgctccaagtcaagcacgctt 22026526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 9251182 - 9251098
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactc 244  Q
    ||||||||||| ||||||| ||| ||||||||||| |||| | |||||||||||| ||||||||||||||||||| |||||||||    
T  9251182 agtgtaacatcatagactgctttcaggattgtcgattgaccccacaaaccaacacaagttttttcagcgtgttttgtcctcactc 9251098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 41658981 - 41659104
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacctatcttaa 285  Q
    |||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| ||||   | ||| ||||||||||||||||||||  ||    
T  41658981 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttacagggaaacttcccggtaggtcacctatcccaa 41659080  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
     | | ||||||||||| |||||||    
T  41659081 aattgctccaagtcaaacacgctt 41659104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 30527358 - 30527424
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||||||||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30527358 attgtcgactgatcctacaaatcaacacgagtcttttcagcgtgttttatcctcactcgcacgctta 30527424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 6463393 - 6463486
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaa-ccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||||||||||||||   ||| || ||||||||||||| ||| ||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  6463393 gtgtaacatcctagacgactttaagcattgtcgactgaccctaaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctta 6463486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 27926193 - 27926046
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||| || ||||||||||||| |||||||||||||||||| |||||||| |||||| ||||||||||||| |||| | | |||    
T  27926193 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaa 27926094  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||  ||||| |||  || | | |||||||||||||||||||    
T  27926093 cttcccggtacctcacccatcccaa-attgctccaagtcaagcacgctt 27926046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 28453628 - 28453485
Alignment:
Q  167 catcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcc 265  Q
    ||||| |||||| |||||||||||||||||||   ||||||| ||||||| | |||||||| |||||| ||||||||||||  |||| | | ||| ||||    
T  28453628 catcccagactgcttttaggattgtcgactgatcttacaaacaaacacgactcttttcagcatgttttgtcctcactcgcagtcttattaggaaacttcc 28453529  T
Q  266 cggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
      |||||||| | |||  |||| |||||||||||||||||||||    
T  28453528 gagtaggtcatccatccaaagactactccaagtcaagcacgctt 28453485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 31283528 - 31283619
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacc 277  Q
    ||||||||||||| | |||||||||||||||| |||||| || ||||| |||||||||||||||||| | | ||| ||||||||||||||||    
T  31283528 attgtcgactgaccccacaaaccaacacgagtcttttcaacgcgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacc 31283619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 33852150 - 33852257
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc--gaaaatttcccggtaggtcacctatcttaagaatactccaagtca 300  Q
    ||||| ||||| |||| |||| |||||||||| ||||||||||||||||||||  |||| ||| ||| ||||||||| |||  |||| ||||||||||||    
T  33852150 acaaatcaacatgagtctttttagcgtgttttgtcctcactcgcacgcttatcatgaaacttt-ccgataggtcacccatccaaagactactccaagtca 33852248  T
Q  301 agcacgctt 309  Q
    |||||||||    
T  33852249 agcacgctt 33852257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 41913240 - 41913117
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| ||| |||| |||||||||||||||| |||||||| |||||||| ||||||||| | | ||| || |  |||||||||  |||  ||    
T  41913240 attgtcgactgaccctataaactaacacgagttttttcaacgtgttttgtcctcacttgcacgcttaccaagaaactttctagtaggtcactcatccaaa 41913141  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||| ||||||||||||||||    
T  41913140 gactacttcaagtcaagcacgctt 41913117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 22705424 - 22705354
Alignment:
Q  208 ccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacc 277  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||| | ||||| ||||||||||||||||    
T  22705424 ccaacacgagtcttttcagcgtgttttgtcctcactggcacgcttactggaaaacttcccggtaggtcacc 22705354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 29971304 - 29971359
Alignment:
Q  188 ttgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcact 243  Q
    ||||||||||||| || | ||||||||||||||||||||| |||||| ||||||||    
T  29971304 ttgtcgactgactttatagaccaacacgagttttttcagcatgttttgtcctcact 29971359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 22840425 - 22840477
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcct 239  Q
    |||||||||||||  ||||||||||||||||| ||||||| ||||||| ||||    
T  22840425 attgtcgactgaccatacaaaccaacacgagtcttttcagtgtgttttgtcct 22840477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 25308041 - 25307969
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||| |||||||  | | ||| |||||||||| ||||||||||  ||| |||||||||||||||||    
T  25308041 ttttaggattgccgactgatcccataaatcaacacgagtcttttcagcgtactttgtcctcactcgcacgctt 25307969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 15567447 - 15567490
Alignment:
Q  202 tacaaaccaacacgagttttttcagcgtgttttatcctcactcg 245  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||    
T  15567447 tacaaatcaacacgagtattttcagtgtgttttatcctcactcg 15567490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 27021840 - 27021903
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttca 225  Q
    |||||||||  | |||||||| ||||||| |||||||||  |||||||||||||||| ||||||    
T  27021840 tgtaacatctcatactgttttcaggattgccgactgacttcacaaaccaacacgagtcttttca 27021903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 10729918 - 10729828
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||||||||   ||| || |||| | ||| ||||| ||||  ||||||||| ||||||||||| ||| ||| |||||||||||||    
T  10729918 tgtaacatcctagacgactttcagtattgccaactaactcttcaaaataacacgagtcttttcagcgtgctttgtccacactcgcacgctt 10729828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 28374015 - 28374056
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactc 244  Q
    ||||| ||| || |||||||||||||||||||||||||||||    
T  28374015 acaaatcaatacaagttttttcagcgtgttttatcctcactc 28374056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 29117501 - 29117444
Alignment:
Q  192 cgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||| ||| |||||||||||||||||| |||||||  || ||| ||||||||||||||    
T  29117501 cgaccgaccctacaaaccaacacgagtcttttcaggatgatttgtcctcactcgcacg 29117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 27819105 - 27819187
Alignment:
Q  168 atcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||| |||||||||||||||||||| | || || ||||||| || ||||||| |||  || ||||||||| |||||||    
T  27819105 atcctagactgcttttaggattgtcgactgaccccac-aatcaacacgggtcttttcagtgtg-cttgtcctcactcacacgctt 27819187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 34688092 - 34688044
Alignment:
Q  201 ctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    ||||||||||||| |||| |||||| |||||||| |||||| |||||||    
T  34688092 ctacaaaccaacatgagtcttttcaacgtgttttgtcctcattcgcacg 34688044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 1516 - 1367
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| |||||| ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | ||    
T  1516 gtgtaacatcccagactgctttcaggattgtcgactgacgccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 1417  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||| |||  || | | |||||||||||||||||||    
T  1416 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 17730958 - 17731108
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-a 258  Q
    |||||||||||||||||   | | |||||||||||||||| |||||||||||||||||| |||| |||||||||| |||||||| ||||||||| ||| |    
T  17730958 agtgtaacatcctagacgactctcaggattgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcacttgcacgcttaccgata 17731057  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || || |||||||||||||||||| || | | |||||||||||||||||||    
T  17731058 aactttccggtaggtcacctatctcaaaattgctccaagtcaagcacgctt 17731108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 17027382 - 17027530
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||| |||||||| | | |||    
T  17027382 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaa 17027481  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  17027482 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 17027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 162 - 304
Target Start/End: Complemental strand, 7912173 - 7912030
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||| |||||| ||| |||||||||||||||| | |||||||||||| ||| ||||||||||||||| |||||||||||| ||||| ||| |||    
T  7912173 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaat 7912074  T
Q  262 -ttcccggtaggtcacctatcttaagaatactccaagtcaagca 304  Q
     |||||||||||||||| |||  || | | ||||||||||||||    
T  7912073 cttcccggtaggtcacccatcccaaaattgctccaagtcaagca 7912030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 9352357 - 9352209
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||| ||| |||||| ||| ||||||| |||||||| | |||||||||||||||| |||||||| |||||| |||||||||||||||||| ||| |||    
T  9352357 tgtaacgtcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgagaaa 9352258  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||| ||||||||||| |||  || | | |||||||||||||||||||    
T  9352257 cttccaggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 9352209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 20850616 - 20850468
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||| || | |||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20850616 tgtaacaccccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20850517  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20850516 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20850468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 13191358 - 13191512
Alignment:
Q  156 tgtaagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc 255  Q
    ||||| ||||||| || |||||| ||| | ||||| |||||||| | |||||||||||||||| ||||||| || |||| ||||||||||||||||||||    
T  13191358 tgtaactgtaacaccccagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagtgtattttgtcctcactcgcacgcttatc 13191457  T
Q  256 -gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     | ||| |||||||| ||||||| |||| || | | |||||||||||||||||||    
T  13191458 gggaaacttcccggttggtcacccatctcaaaattgctccaagtcaagcacgctt 13191512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 13492628 - 13492479
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgctta-tcgaaa 259  Q
    ||||||| ||||||||| ||| | ||||| |||||||| | |||||||||||||||| ||||||||||| |||| |||||||||||||||||| | | ||    
T  13492628 tgtaacaccctagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttttcctcactcgcacgcttactgggaa 13492529  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||| |||  || | | |||||||||||||||||||    
T  13492528 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 13492479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 28780406 - 28780257
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| |||||| ||| || ||||||| ||||| | |||||||||||||||| ||||||   |||||||||||||||||||| |||| | ||||    
T  28780406 gtgtaacatcccagactgctttcagcattgtcggctgaccccacaaaccaacacgagtcttttcaaaatgttttatcctcactcgcacacttaccagaaa 28780307  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||| |||  || | | |||||||||||||||||||    
T  28780306 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 28780257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 11062581 - 11062432
Alignment:
Q  162 tgtaacatcctagactgttttt-aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    |||||||||||| ||||||||| ||||||| |||||||||||| ||| |||||| | ||||||||||||||||| ||||||||| |  | ||||| | ||    
T  11062581 tgtaacatcctaaactgttttttaggattgccgactgactctataaatcaacacaaattttttcagcgtgttttgtcctcactcacgggtttatcgggaa 11062482  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | || ||| ||||||||| |||  |||| |||||||||||||||||||||    
T  11062481 actttccgataggtcacccatccaaagactactccaagtcaagcacgctt 11062432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 21311810 - 21311662
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||| || |||||||| |||| ||||||||||||||||||  || ||||||||||| || |||||||||| |||| | |||||    
T  21311810 tgtaacatcccagacgactttaagcattgtcgattgaccctacaaaccaacacgagtccttacagcgtgttttgtcttcactcgcacacttaccggaaaa 21311711  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
      ||||||||||||||| ||| ||||| ||||| |||||||||||||||    
T  21311710 catcccggtaggtcacccatcataagactactcaaagtcaagcacgctt 21311662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 2890715 - 2890838
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||||| | ||| ||| | |||||||||| ||| ||     
T  2890715 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttatcgggaaacttctcagtaggtcacccatcctag 2890814  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
     | || | ||||||||||||||||    
T  2890815 tactatttcaagtcaagcacgctt 2890838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 309
Target Start/End: Original strand, 20126028 - 20126181
Alignment:
Q  157 gtaagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tc 255  Q
    ||||||||||| ||| ||||   ||| || ||||||||| ||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |     
T  20126028 gtaagtgtaacgtcccagacgactttaagcattgtcgacggaccctacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttactg 20126127  T
Q  256 gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | ||| |||  |||||||| || ||   |||| |||||||||||||||||||||    
T  20126128 ggaaacttctaggtaggtcgcccattcaaagactactccaagtcaagcacgctt 20126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 23776735 - 23776587
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||||| |||||||||||||| | ||||||||||||||| || ||||||||||| ||| | | |||    
T  23776735 tgtaacatcccagactgctttcaggattgccgactgactccacaaaccaacacgaatcttttcagcgtgttttgtcgtcactcgcacgtttactaggaaa 23776636  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||| |||||||| | |||  || | | |||||||||||| ||||||    
T  23776635 cttcccagtaggtcatccatcccaaaattgctccaagtcaagtacgctt 23776587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 3652793 - 3652670
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    |||||| |||||| ||||||||||||| |||| |||||||| | |||| |||||||||||||||||| | | ||  |||||||||||||||| |||  ||    
T  3652793 attgtcaactgaccctacaaaccaacaagagtcttttcagctttttttgtcctcactcgcacgcttaccgggaagcttcccggtaggtcacccatccaaa 3652694  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||| ||||    
T  3652693 gactactccaagtcaagcaagctt 3652670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 20896536 - 20896687
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgcttatc-ga 257  Q
    |||||||||||| |||||| ||| | ||||| || ||||| | |||||||||||||||| ||||||| ||| |||| ||||||||||||| |||| | |     
T  20896536 agtgtaacatcccagactgctttcaagattgccggctgaccccacaaaccaacacgagtcttttcagtgtgtttttctcctcactcgcacacttaccggg 20896635  T
Q  258 aaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||||||||||||| |||  || | | ||||||| |||||||||||    
T  20896636 aaatttcccggtaggtcacccatcccaaaattgctccaagccaagcacgctt 20896687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 305
Target Start/End: Original strand, 2891170 - 2891288
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaatttcccggtaggtcacctatcttaag 286  Q
    |||| |||||||| |||||||||||||||| | ||||||||||||||| |||||||||||||||||| || |||  ||   |||||||||| |||  |||    
T  2891170 attgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtcctcactcgcacgcttaccggaaacatcgtagtaggtcacccatccaaag 2891269  T
Q  287 aatactccaagtcaagcac 305  Q
    | |||||||| ||||||||    
T  2891270 actactccaaatcaagcac 2891288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 11062103 - 11062033
Alignment:
Q  183 taggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||  ||||| || ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  11062103 taggattaccgactaaccctacaaaccaacacgagtttttttagcgtgttttgtcctcactcgcacgctta 11062033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 309
Target Start/End: Complemental strand, 13493090 - 13492936
Alignment:
Q  157 gtaagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgcttatc 255  Q
    |||||||||||| || |||||| ||| |||||||  ||||||| ||||||| |||||||||| |||||||| || |||| |||||||||||||||||| |    
T  13493090 gtaagtgtaacaccccagactgctttcaggattgctgactgaccctacaaatcaacacgagtcttttcagcatgtttttgtcctcactcgcacgcttacc 13492991  T
Q  256 -gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |  || || ||||||||||||| |||  || | | ||| |||||||||||||||    
T  13492990 gggtaactttccggtaggtcacccatcccaaaattgctctaagtcaagcacgctt 13492936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 3653191 - 3653049
Alignment:
Q  164 taacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatt 262  Q
    |||||||| ||||  |||| || |||| ||| |||| ||||||||||| |||||| ||||||||||||||| ||    |||||||||||||| | ||| |    
T  3653191 taacatcccagacgattttaagcattgccgattgaccctacaaaccaatacgagtcttttcagcgtgttttgtc----ctcgcacgcttatcgggaaact 3653096  T
Q  263 tcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || || ||||||||| |||  |||| |||||||||||||||||||||    
T  3653095 tctcgataggtcacccatccaaagactactccaagtcaagcacgctt 3653049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 2681071 - 2681162
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||||| |||| | ||| ||||||| |||||||| | |||||||||||||||| || ||| |||||||| |||||||| |||||||||    
T  2681071 tgtaacatcccagacagctttcaggattgccgactgaccccacaaaccaacacgagtcttctcaacgtgttttgtcctcacttgcacgctta 2681162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 305
Target Start/End: Original strand, 2720439 - 2720558
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    |||| |||||||| || |||||| |||||||| || |||||||||||| | |||||||||||||||||| | ||| |||||  || |||||| |||  ||    
T  2720439 attgccgactgaccctgcaaaccgacacgagtcttctcagcgtgttttgttctcactcgcacgcttatcgggaaacttcccaatatgtcacccatccaaa 2720538  T
Q  286 gaatactccaagtcaagcac 305  Q
    || |||||||||||||||||    
T  2720539 gactactccaagtcaagcac 2720558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 306
Target Start/End: Complemental strand, 21312267 - 21312121
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| ||||   ||| || ||||||||||||| |||||||||||||| ||| ||||||  ||||||| || |||||  ||| |||| | | ||    
T  21312267 gtgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacaccagtcttttcaatgtgttttgtcttcacttacacacttaccgggaa 21312168  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacg 306  Q
    | |||||||||||||||  ||| ||||| | ||||||||||||||||    
T  21312167 acttcccggtaggtcactcatcataagactgctccaagtcaagcacg 21312121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 23986168 - 23986258
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||| | |||| ||| || |||| |||||||| | |||||||||||| ||| |||||||||||| || |||||||||||||||||    
T  23986168 tgtaacatcccatactgctttcagaattgccgactgaccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcgcacgctt 23986258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 6330811 - 6330911
Alignment:
Q  209 caacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgct 308  Q
    |||||||||| |||   ||||||||| || ||||| |||||||||  || |||||  |||||||||||| ||| ||||||||||| ||||||||||||||    
T  6330811 caacacgagtctttctcgcgtgttttgtcatcacttgcacgcttactgagaatttttcggtaggtcaccaatcataagaatactcaaagtcaagcacgct 6330910  T
Q  309 t 309  Q
    |    
T  6330911 t 6330911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 7912602 - 7912514
Alignment:
Q  165 aacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||||| ||| || ||| ||||||| ||||| || | ||||||||||| |||| ||||||||||||||| |||||||||| |||||||    
T  7912602 aacatcccagattgctttcaggattgccgactaaccccacaaaccaacatgagtcttttcagcgtgttttgtcctcactcgtacgctta 7912514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 17851188 - 17851065
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacctatcttaa 285  Q
    |||| ||| |||| |||||||||||||||||| |||||  | |||||| |||| |||||||||| || | | ||| ||||| ||||||| || |||  ||    
T  17851188 attgccgattgaccctacaaaccaacacgagtcttttcgacttgttttgtcctaactcgcacgcgtactaggaaacttcccagtaggtctcccatccgaa 17851089  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  17851088 gactactccaagtcaagcacgctt 17851065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 27334364 - 27334305
Alignment:
Q  186 gattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcg 245  Q
    |||||||||||||| | ||||| |||||||||| ||||||||||||||| ||||||||||    
T  27334364 gattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27334305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 27395104 - 27395045
Alignment:
Q  186 gattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcg 245  Q
    |||||||||||||| | ||||| |||||||||| ||||||||||||||| ||||||||||    
T  27395104 gattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 9440708 - 9440794
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    |||||||||| |||||| ||| | ||||| |||||||| | |||||||| |||||||||||||||||| |||| || ||||| ||||    
T  9440708 tgtaacatcccagactgctttcaagattgccgactgaccccacaaaccagcacgagttttttcagcgtattttgtcatcacttgcac 9440794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 14771595 - 14771653
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcg 245  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||| ||||| ||||    
T  14771595 attgtcgactgactctacaaaccaacatgagtcttatcagcgtgttttgtcctcgctcg 14771653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 6331219 - 6331291
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    |||||||||  |||||| ||| | ||||| |||||||| |||||||||||||||||| ||| |||| ||||||    
T  6331219 tgtaacatctcagactgctttcaagattgccgactgaccctacaaaccaacacgagtctttccagcatgtttt 6331291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 21312508 - 21312468
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagc 227  Q
    ||||||||||||| |||||||||||||| ||| ||||||||    
T  21312508 attgtcgactgaccctacaaaccaacaccagtcttttcagc 21312468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 6e-34; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 309
Target Start/End: Original strand, 7646328 - 7646477
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aa 259  Q
    ||||||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| |||| ||| ||    
T  7646328 gtgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaa 7646427  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||| |||  || | | |||||||||||||||||||    
T  7646428 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 7646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 7646710 - 7646562
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||||||||||||||||| || | |||||||||||||||| ||||||| ||||||| |||||||||||||||||||| |||||    
T  7646710 tgtaacatcccagacgacttttaggattgtcgactaaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttatcggaaaa 7646611  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || ||||||||||||| |||  || | | |||||||||||||||||||    
T  7646610 ctttccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 7646562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 34405442 - 34405590
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||||||||   |||||||||||||||||||| | ||||| ||||||| || ||||||||||||||| |||||||||||||||||| | | |||    
T  34405442 tgtaacatcctagacaacttttaggattgtcgactgaccccacaaatcaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 34405541  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  34405542 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 34405590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 9125254 - 9125106
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||| || |||||| ||| ||||||| |||||||| | |||||||||||||||| |||||||| |||||| |||||||||||||||||| | |||||    
T  9125254 tgtaacaccccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccggaaaa 9125155  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||| ||||||||||||||    
T  9125154 cttcccggtaggtcacccatcccaaaattgctccgagtcaagcacgctt 9125106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 36422546 - 36422399
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  36422546 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 36422447  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  36422446 cttcccggtaggtcacccatcccaa-attgctccaagtcaagcacgctt 36422399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 42515362 - 42515239
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggtcacctatcttaa 285  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||||| || |||| |||| |||| |||||| |||  ||    
T  42515362 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcacccgcacgcttaccgaaaaagttcctggtatgtcacccatccaaa 42515263  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  42515262 gactactccaagtcaagcacgctt 42515239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 2941606 - 2941756
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaa 258  Q
    |||||||||||| |||||| |||   ||||| ||||||||   |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |    
T  2941606 agtgtaacatcccagactgctttcgtgattgccgactgaccgcacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccggga 2941705  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||| |||  || | | |||||||||||||||||||    
T  2941706 aacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 2941756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 28496150 - 28496001
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||| | | |||||||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | ||    
T  28496150 gtgtaacattccaaactgttttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaa 28496051  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||  ||||||||| |||  || | | |||||||||||||||||||    
T  28496050 acttcccaataggtcacccatcccaaaattgctccaagtcaagcacgctt 28496001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 42515815 - 42515691
Alignment:
Q  186 gattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatctta 284  Q
    ||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||  |||||||||| |||  |    
T  42515815 gattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaatttccatgtaggtcacccatccca 42515716  T
Q  285 agaatactccaagtcaagcacgctt 309  Q
    | | | |||||||||||||||||||    
T  42515715 aaattgctccaagtcaagcacgctt 42515691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 2193551 - 2193403
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||  |||||| ||| ||||||| |||||||| | ||||| |||||||||| ||||||||||||||| ||||||||| |||||||| | | |||    
T  2193551 tgtaacatctcagactgctttcaggattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaa 2193452  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||| ||||||||||||    
T  2193451 cttcccggtaggtcacccatcccaaaattgctccaaatcaagcacgctt 2193403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 29038871 - 29039019
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||| || |||| |||||||| |||||||||||||||||| ||||||||||||||| |||||| || |||||||| | | |||    
T  29038871 tgtaacatcccagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcagtcacacgcttaccgggaaa 29038970  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || ||||||||||| | |||  |||| |||||||||||||||||||||    
T  29038971 cttaccggtaggtcatccatccaaagactactccaagtcaagcacgctt 29039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 2611535 - 2611651
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaatttcccggtaggtcacctatcttaag 286  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||||      | || |||||||||||||| |||  |||    
T  2611535 attgtcgactgaccctacaaaccaacacgagtcttttcagagtgttttgtcctcactcgcacgctt------agttacccggtaggtcacccatccaaag 2611628  T
Q  287 aatactccaagtcaagcacgctt 309  Q
    | |||||||||| ||||||||||    
T  2611629 actactccaagtaaagcacgctt 2611651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 22529111 - 22529234
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| ||||||||||||| |||| |||||||||| |||| ||||||||| |||||||| ||| ||| ||| | |||||||||| |||  ||    
T  22529111 attgtcgactgaccctacaaaccaacatgagtcttttcagcgtattttgtcctcactcacacgcttaccgagaaacttctcagtaggtcacccatccaaa 22529210  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || ||||||||||||| |||||||    
T  22529211 gactactccaagtcaaacacgctt 22529234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 13124997 - 13125135
Alignment:
Q  173 agactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgctta-tcgaaaatttcccggta 270  Q
    |||||| ||| ||||||| |||||||| | ||||||||||||||||  |||||||||| |||| |||||||||||||||||| | | ||| |||||||||    
T  13124997 agactgctttcaggattgccgactgaccccacaaaccaacacgagtcctttcagcgtgtttttgtcctcactcgcacgcttactgggaaacttcccggta 13125096  T
Q  271 ggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||| |||  || | | |||||||||||||||||||    
T  13125097 ggtcacccatcccaaaattgctccaagtcaagcacgctt 13125135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 43233230 - 43233137
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcac 276  Q
    ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | ||||| ||| |||||||||||    
T  43233230 aggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttctcggtaggtcac 43233137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 2466218 - 2466071
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||| || ||||||||||||| |||||||| ||||||||| ||||||||||||||| |||||||| ||| ||||| | | |||    
T  2466218 tgtaacatcccagacgactttaagcattgtcgactgac-ctacaaactaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaa 2466120  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||||||||||||| |||   | | | |||||||||||||||||||    
T  2466119 tttcccggtaggtcacccatcccgaaattgctccaagtcaagcacgctt 2466071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 309
Target Start/End: Complemental strand, 2189438 - 2189291
Alignment:
Q  163 gtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaat 261  Q
    ||||||||| |||||| ||| ||||||| |||||| | | ||||| |||||||||| || |||||||||||| ||||||||| |||||||| | | |||     
T  2189438 gtaacatcccagactgctttcaggattgccgactgtccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcacacgcttaccgggaaac 2189339  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||||||||  |||  || | | |||||||||||||||||||    
T  2189338 ttcccggtaggtcactcatcccaaaattgctccaagtcaagcacgctt 2189291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 6747952 - 6748042
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaatttcccggtaggtcacc 277  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| |||| |||||| | || ||||| |||||    
T  6747952 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgaaaaatacctggtagatcacc 6748042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 13122366 - 13122504
Alignment:
Q  173 agactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgcttatc-gaaaatttcccggta 270  Q
    |||||| ||| ||||||| ||| |||| | |||||||||||||||| ||||||||||| |||| |||||||||||||||||| | | ||| |||||||||    
T  13122366 agactgctttcaggattgccgattgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttaccgggaaacttcccggta 13122465  T
Q  271 ggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||| |||  || | | |||||| ||||||||||||    
T  13122466 ggtcacccatcccaaaattgctccaaatcaagcacgctt 13122504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 28495470 - 28495560
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||  |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  28495470 tgtaacatcgcagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgggttttgtcctcactcgcacgctt 28495560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 309
Target Start/End: Original strand, 6718925 - 6719073
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| ||||   |||||||||||  ||||||| | |||||||||||||| | ||||||| ||||||| |||||||||||||||||| | | ||    
T  6718925 gtgtaacatcccagacgacttttaggattgctgactgaccccacaaaccaacacgattcttttcagtgtgttttgtcctcactcgcacgcttaccgggaa 6719024  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||| || |||||| |||  || | |||||||||||||||||||||    
T  6719025 agttcccgatatgtcacccatcccaa-attactccaagtcaagcacgctt 6719073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 35474011 - 35474120
Alignment:
Q  201 ctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaagaatactccaagtc 299  Q
    |||||||||||||| |||  |||||||||||||| ||||||||||||| |||| ||| ||| ||||||||| |||||| |||  |||| |||||||||||    
T  35474011 ctacaaaccaacacaagtcatttcagcgtgttttgtcctcactcgcacacttaccgagaaaattcccggtacgtcacccatccaaagactactccaagtc 35474110  T
Q  300 aagcacgctt 309  Q
    || |||||||    
T  35474111 aaacacgctt 35474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 3305238 - 3305347
Alignment:
Q  201 ctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtc 299  Q
    ||||||| |||||||||| ||||||||||||||| | ||||||||||| |||| | | ||| || ||||||||||||| |||  |||| |||||||| ||    
T  3305238 ctacaaatcaacacgagtcttttcagcgtgttttgttctcactcgcactcttaccaggaaactttccggtaggtcacccatccaaagactactccaaatc 3305337  T
Q  300 aagcacgctt 309  Q
    ||||||||||    
T  3305338 aagcacgctt 3305347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 18833581 - 18833465
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||| || |||||| ||| ||||||| ||||| |  | ||||| |||||||||| ||||||||||||||| |||||||||||||| ||| | | |||    
T  18833581 tgtaacaccccagactgctttcaggattgccgacttatcccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaa 18833482  T
Q  261 tttcccggtaggtcacc 277  Q
     ||||||||||||||||    
T  18833481 cttcccggtaggtcacc 18833465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 680112 - 679963
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttta-tcctcactcgcacgcttatcga-a 258  Q
    ||||||||||| ||||   ||| || ||||| ||||||| ||||||||||||| |||| |||||||||||||||  | |||||||||| | ||| ||  |    
T  680112 gtgtaacatcccagacgactttaagcattgtagactgac-ctacaaaccaacatgagtcttttcagcgtgtttttgttctcactcgcatgtttaccgcga 680014  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || ||||||| |||||||| |||  |||| |||||||||||||||||||||    
T  680013 aacttcccggcaggtcacccatccaaagactactccaagtcaagcacgctt 679963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 36422677 - 36422591
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    |||||||||| ||| |  |||||| ||||||||||||| | ||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  36422677 tgtaacatcccagattacttttagcattgtcgactgaccccacaaatcaacacgagtcttttcagtgtgttttgtcctcactcgcac 36422591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 6747457 - 6747542
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgca 247  Q
    |||||||||| |||||| ||| || |||| |||||||| |||||||||||||| ||| |||||| | |||||| ||||||||||||    
T  6747457 tgtaacatcccagactgctttaagcattgccgactgaccctacaaaccaacacaagtcttttcaacttgttttgtcctcactcgca 6747542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 36015335 - 36015407
Alignment:
Q  177 tgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| |||| ||||||||| ||||    
T  36015335 tgtttttaggattgccgactaactctacaaactaacacgagtctttttagcgtattttgtcctcactcacacg 36015407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 306
Target Start/End: Original strand, 29357341 - 29357452
Alignment:
Q  196 tgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaagaatactcc 294  Q
    |||| |||||||||||||||||| |||||| |||| ||| | ||||||||||||||| ||||  || || |||| |||||| | ||||||||| |||||     
T  29357341 tgaccctacaaaccaacacgagtcttttcaacgtgctttgttctcactcgcacgcttttcgaggaacttaccggaaggtcatccatcttaagactactct 29357440  T
Q  295 aagtcaagcacg 306  Q
    ||||||| ||||    
T  29357441 aagtcaaacacg 29357452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 43776182 - 43776289
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaatttcccggtaggtcacctatcttaagaatactccaagtcaa 301  Q
    |||||||||||||||| ||||||||||||||| || ||| ||||||||||| | ||||| ||||| | |||||||| ||   || | | |||||||||||    
T  43776182 acaaaccaacacgagtcttttcagcgtgttttgtcttcattcgcacgcttactggaaaacttccccgcaggtcacccattccaaaattgctccaagtcaa 43776281  T
Q  302 gcacgctt 309  Q
    ||||||||    
T  43776282 gcacgctt 43776289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 26419108 - 26419168
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactc 244  Q
    |||||||||||||||| | |||||||||||||||| |||||| | |||||| |||||||||    
T  26419108 aggattgtcgactgaccccacaaaccaacacgagtcttttcaacatgttttgtcctcactc 26419168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 25182656 - 25182566
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||  || || |||||||||| |||| |||| | |||| |||| ||||||||||| ||||||||||  ||||||||| ||||||    
T  25182656 tgtaacatccctgagtgcttttaggattttcgattgaccccacaacccaatacgagtttttttagcgtgttttgccctcactcgaacgctt 25182566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 31743765 - 31743827
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||||||||| || |||||||||||||||||| |||||||||||  ||  |||||||||||||    
T  31743765 attgtcgactaaccctacaaaccaacacgagtcttttcagcgtgcgttgacctcactcgcacg 31743827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 7461274 - 7461319
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  7461274 acaaatcaacacgagtcttttcagcgtgttttatcttcactcgcac 7461319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 11372704 - 11372657
Alignment:
Q  196 tgactctacaaaccaacacgagttttttcagcgtgttttatcctcact 243  Q
    |||| |||||||||||||||||| |||||||| |||||| ||||||||    
T  11372704 tgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcact 11372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 5406483 - 5406525
Alignment:
Q  207 accaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||    
T  5406483 accaacacgagtgttttcagtgtgttttgtcctcactcgcacg 5406525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 2465953 - 2465880
Alignment:
Q  237 cctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||||||| ||||| ||  |||||||||||||||||||| |||  || | | |||||||||||||||||||    
T  2465953 cctcactcgcatgcttaccgggaaatttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 2465880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 46425929 - 46425888
Alignment:
Q  268 gtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||| ||| ||||| |||||||||||||||||||||    
T  46425929 gtaggtcacccatcataagactactccaagtcaagcacgctt 46425888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 43776380 - 43776324
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagt 218  Q
    |||||||||| |||||| ||| ||||||| ||||| || | ||||||||||||||||    
T  43776380 tgtaacatcccagactgctttcaggattgccgactaaccccacaaaccaacacgagt 43776324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 8067575 - 8067427
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||||||||||| ||| ||||   |||||||||||||||| ||||||||||||||| |||||||||||||||||||| | |||    
T  8067575 tgtaacatcccagactgcttttaggattgccgattgacctcacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttatcgggaaa 8067476  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  8067475 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 8067427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 37045327 - 37045182
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||||| ||||   ||| || ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||  ||     
T  37045327 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttatcgggaa- 37045229  T
Q  262 ttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||||||||||||| |||  |||| |||||||||||||||||||||    
T  37045228 -tcccggtaggtcacccatccaaagactactccaagtcaagcacgctt 37045182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 160 - 309
Target Start/End: Complemental strand, 50348043 - 50347893
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaa 258  Q
    |||||||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| |||||| | |    
T  50348043 agtgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttatcggga 50347944  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || ||| |||||||||||| |||  || | | |||||||||||||||||||    
T  50347943 aacttctcggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 50347893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 308
Target Start/End: Complemental strand, 25248407 - 25248259
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagt-tttttcagcgtgttttatcctcactcgcacgcttatcga-aa 259  Q
    |||||||||| |||||| ||||||||||||||||| ||   ||||| |||||||||| ||||||| |||||||| |||||||||||||||||| ||  ||    
T  25248407 tgtaacatcccagactgcttttaggattgtcgactaacctcacaaatcaacacgagtctttttcaacgtgttttgtcctcactcgcacgcttaccgtgaa 25248308  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgct 308  Q
    | |||||||||||||| | ||| ||||| ||||||||||||||||||||    
T  25248307 acttcccggtaggtcatccatcataagactactccaagtcaagcacgct 25248259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 32227795 - 32227647
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||||||||| |||||| | |||    
T  32227795 tgtaacatcccagactgctttcagcattgtcgactgaccctacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttatcgggaaa 32227696  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  32227695 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 32227647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 305
Target Start/End: Complemental strand, 39653459 - 39653315
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| |||||| ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  39653459 tgtaacatcccagactgcttttagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 39653360  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcac 305  Q
     |||||||||||||||| |||  || | | |||||||||||||||    
T  39653359 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcac 39653315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 13150405 - 13150553
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| | ||||| |||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  13150405 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 13150504  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  13150505 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 13150553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 13149953 - 13150098
Alignment:
Q  165 aacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaattt 263  Q
    ||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||| |||| |||| ||| ||| ||    
T  13149953 aacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacacttaccgagaaactt 13150052  T
Q  264 cccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||||||| ||   || | | |||||||||||||||||||    
T  13150053 cccggtaggtcacccattccaaaattgctccaagtcaagcacgctt 13150098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 16811674 - 16811528
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||  ||||| |||||||||||| ||||||| | |||    
T  16811674 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagc--gttttgtcctcactcgcatgcttatcgggaaa 16811577  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  16811576 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 16811528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 20884999 - 20885116
Alignment:
Q  193 gactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatac 291  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||| ||| ||||||||| | | |||||||||||||||||||| |||  || | |||    
T  20884999 gactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctaacttgcacgcttaacgggaaatttcccggtaggtcacccatccaaatactac 20885098  T
Q  292 tccaagtcaagcacgctt 309  Q
    ||||||||||||||||||    
T  20885099 tccaagtcaagcacgctt 20885116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 32227072 - 32227220
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||  ||||||| ||||||||||||| |||| | | |||    
T  32227072 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttaccgggaaa 32227171  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  32227172 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 32227220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 11179887 - 11180033
Alignment:
Q  164 taacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatt 262  Q
    |||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||| ||| |||| | | |||      
T  11179887 taacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacacttaccgggaaaca 11179986  T
Q  263 tcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||||||||||| |||  || | | |||||||||||||||||||    
T  11179987 tcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 11180033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 27187191 - 27187329
Alignment:
Q  173 agactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgcttatc-gaaaatttcccggta 270  Q
    |||||||||| || |||| |||||||| | |||||||||||||||| ||||||||||| |||| |||||||||||||||||||| | ||| |||||||||    
T  27187191 agactgttttcagaattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttatcgggaaacttcccggta 27187290  T
Q  271 ggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||| |||  || | | ||| |||||||||||||||    
T  27187291 ggtcacccatcccaaaattgctcaaagtcaagcacgctt 27187329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 307
Target Start/End: Original strand, 25230124 - 25230245
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| |||||||||||||| ||| ||| || |||||||| ||||||||||| |||||| | ||||| |||| | ||||||||| ||| |||    
T  25230124 attgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggtcacccatcataa 25230223  T
Q  286 gaatactccaagtcaagcacgc 307  Q
    || |||||||||||||||||||    
T  25230224 gactactccaagtcaagcacgc 25230245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 307
Target Start/End: Original strand, 25237711 - 25237832
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| |||||||||||||| ||| ||| || |||||||| ||||||||||| |||||| | ||||| |||| | ||||||||| ||| |||    
T  25237711 attgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggtcacccatcataa 25237810  T
Q  286 gaatactccaagtcaagcacgc 307  Q
    || |||||||||||||||||||    
T  25237811 gactactccaagtcaagcacgc 25237832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 25238575 - 25238683
Alignment:
Q  202 tacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatactccaagtca 300  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |  |||| |||||| ||||||||| |||  |||| ||||||||||||    
T  25238575 tacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccaaaaaacttcccgataggtcaccaatccaaagactactccaagtca 25238674  T
Q  301 agcacgctt 309  Q
    |||||||||    
T  25238675 agcacgctt 25238683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 31284127 - 31284275
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||| || ||| | ||||| |||||||| | |||||||||||||||| ||||| ||||||||| ||| ||||||||||||| || |||||    
T  31284127 tgtaacatcccagattgctttcatgattgccgactgaccccacaaaccaacacgagtcttttcggcgtgttttgtccccactcgcacgcttgtcggaaaa 31284226  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||||| |||||||| |||  || | | |||||||||||||||||||    
T  31284227 cttcccggcaggtcacccatcccaaaattgctccaagtcaagcacgctt 31284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 4067236 - 4067359
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    |||| |||||||| ||||||||||||||  || ||||||||||||||| |||||||| ||||||||| | ||||| || ||||||||||| | |||  ||    
T  4067236 attgccgactgaccctacaaaccaacactggtcttttcagcgtgttttgtcctcacttgcacgcttaccagaaaactttccggtaggtcatccatccaaa 4067335  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  4067336 gactactccaagtcaagcacgctt 4067359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 25230581 - 25230704
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||| ||||||| |||||||||||||||||| ||| |||||||||||   |||||||||||||||| | | ||| ||||| ||||| |||| ||| |||    
T  25230581 attgtagactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataa 25230680  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  25230681 gactactccaagtcaagcacgctt 25230704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 25238168 - 25238291
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    ||||| ||||||| |||||||||||||||||| ||| |||||||||||   |||||||||||||||| | | ||| ||||| ||||| |||| ||| |||    
T  25238168 attgtagactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataa 25238267  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  25238268 gactactccaagtcaagcacgctt 25238291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 14820449 - 14820301
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||| ||| ||||| | | |||    
T  14820449 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaa 14820350  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || ||| ||||||||| |||  || | |  ||||||||||||||||||    
T  14820349 ctttccgataggtcacccatcccaaaattgttccaagtcaagcacgctt 14820301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 25239003 - 25239069
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  25239003 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgctta 25239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 309
Target Start/End: Complemental strand, 28562042 - 28561893
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaa 258  Q
    |||||||||||  | |||| ||| | ||||  |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |    
T  28562042 agtgtaacatctcatactgctttcaagattaccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggga 28561943  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || ||||| |||||||||| |||  || | | |||||||||||||||||||    
T  28561942 aacttccccgtaggtcacc-atcccaaaattgctccaagtcaagcacgctt 28561893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 14814244 - 14814096
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || |||| ||||| || | |||||||||||||||| ||||||||||||||| || ||||||||||||||| | | |||    
T  14814244 tgtaacatcccagactgctttcagtattgccgactaaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacgcttaccgggaaa 14814145  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
      |  |||||||||||| |||  || | | |||||||||||||||||||    
T  14814144 cctttcggtaggtcacccatcacaaaattgctccaagtcaagcacgctt 14814096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 30529982 - 30529834
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaa 259  Q
    ||||||||||||||||   ||| || |||| ||||| || || ||||||||||| ||| |||| |||||||||| |||||||||||| ||||| | | ||    
T  30529982 gtgtaacatcctagacaactttaagcattgccgactaaccctgcaaaccaacacaagtctttttagcgtgttttgtcctcactcgcatgcttactgggaa 30529883  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | || || |||||||||| |||  |||| |||||||||||||||||||||    
T  30529882 actt-ccagtaggtcacccatccaaagactactccaagtcaagcacgctt 30529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 32386596 - 32386733
Alignment:
Q  173 agactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtag 271  Q
    |||||| ||| | ||||| |||||||| | |||||||||||||||| |||| |||||||||| |||||||||| ||||||| | | ||| || ||||| |    
T  32386596 agactgctttcaagattgccgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcggacgcttaccaagaaactttccggtgg 32386695  T
Q  272 gtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||| |||  || | | |||||||||||||||||||    
T  32386696 gtcacccatcccaaaattgctccaagtcaagcacgctt 32386733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 16811220 - 16811104
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaa 260  Q
    |||||||||| ||| || ||| ||||||| |||| ||| | |||||||||||||| | |||||||||| |||| ||||||||||||||||||   | |||    
T  16811220 tgtaacatcccagattgctttcaggattgccgaccgaccccacaaaccaacacgaatcttttcagcgtattttgtcctcactcgcacgcttacggggaaa 16811121  T
Q  261 tttcccggtaggtcacc 277  Q
     ||||||||||||||||    
T  16811120 cttcccggtaggtcacc 16811104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 41473812 - 41473745
Alignment:
Q  186 gattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||| |||||||| | ||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  41473812 gattggcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgctta 41473745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 2911354 - 2911288
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||| |||  |||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  2911354 attgtcgattgatcctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgctta 2911288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 7477486 - 7477338
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||||||||   ||| || ||||||||||||| | ||| ||||||| |||| |||||| |||| ||| | |||||||||||||||  ||| |||    
T  7477486 tgtaacatcctagacgactttaagaattgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctttccgagaaa 7477387  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||||||   |||||| | ||| ||||| ||||| |||||||||| ||||    
T  7477386 tttcccataaggtcagccatcctaagactactctaagtcaagcatgctt 7477338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 25802424 - 25802547
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggtcacctatcttaa 285  Q
    ||||| ||||||| ||||||||||||||  || |||||||||||||||  ||| |||||||| ||| |||| ||| ||||  | ||||||||  || |||    
T  25802424 attgttgactgaccctacaaaccaacacacgtcttttcagcgtgttttgaccttactcgcactcttttcgagaaacttcctagaaggtcacccgtcctaa 25802523  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || ||||||||||||| |||||||    
T  25802524 gactactccaagtcaaacacgctt 25802547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 7494176 - 7494086
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||||||||   ||| || ||||||||||||| | ||| ||||||| |||| |||||| |||| ||| | |||||||||||||||    
T  7494176 tgtaacatcctagacgactttaagaattgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctt 7494086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 25230988 - 25231030
Alignment:
Q  202 tacaaaccaacacgagttttttcagcgtgttttatcctcactc 244  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  25230988 tacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 25231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 30477344 - 30477273
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    ||||||||||||||||| ||||| |||||| |||||||   | ||| |||||||||| |||||||||||||||    
T  30477344 tgtaacatcctagactgcttttaagattgttgactgacctcataaatcaacacgagt-ttttcagcgtgtttt 30477273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 15405816 - 15405755
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcac 248  Q
    ||||||| |||||  |||||||||||||| ||| |||||||||| ||| |||||||| ||||    
T  15405816 attgtcgcctgaccttacaaaccaacacgggttctttcagcgtgctttgtcctcacttgcac 15405755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 18318909 - 18318860
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||| ||| | ||||||||||||||| | |||||||||||||||    
T  18318909 acaaaccaacccgaatcttttcagcgtgttttgttctcactcgcacgctt 18318860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 53150685 - 53150753
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||| ||||||| | |||||| |||| |||| |||||| | |||||| ||||||||||| |||||    
T  53150685 aggattgttgactgaccccacaaactaacatgagtcttttcaacatgttttgtcctcactcgcccgctt 53150753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20053931 - 20054079
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| |||||||||||||||| | |||||||||||||||| |||||||| |||||| |||||||||||||||||| | |||||    
T  20053931 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccagaaaa 20054030  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||| ||||||||||||||    
T  20054031 cttcccggtaggtcacccatcccaaaattgctcctagtcaagcacgctt 20054079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20054387 - 20054535
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20054387 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20054486  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20054487 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20054535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20054843 - 20054991
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20054843 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20054942  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20054943 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20054991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20055299 - 20055447
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20055299 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20055398  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20055399 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20055447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20055755 - 20055903
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20055755 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20055854  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20055855 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20055903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20056211 - 20056359
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20056211 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20056310  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20056311 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20056359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20057114 - 20057262
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20057114 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20057213  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20057214 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20057262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20057570 - 20057718
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20057570 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20057669  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20057670 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 20057718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 20056667 - 20056815
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  20056667 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20056766  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | ||||||||||| |||||||    
T  20056767 cttcccggtaggtcacccatcccaaaattgctccaagtcaaacacgctt 20056815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 50002926 - 50003074
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| |||||||  ||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  50002926 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 50003025  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  50003026 cttcccggtaggtcacccatccaaaaattgctccaagtcaagcacgctt 50003074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 20845510 - 20845660
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaa 258  Q
    |||||||||||  |||||| ||| | ||||| |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |    
T  20845510 agtgtaacatctcagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggga 20845609  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||| |||  || | | |||||||||||||||||||    
T  20845610 aacttcccggtaggtcacccatcccaaaatttctccaagtcaagcacgctt 20845660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 16451784 - 16451932
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| || |||| |||||||||| | |||||    
T  16451784 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaa 16451883  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || ||||||||||||| |||  || | | |||||||||||||||||||    
T  16451884 ctttccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 16451932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 16460937 - 16461085
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcgaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| || |||| |||||||||| | |||||    
T  16460937 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaa 16461036  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     || ||||||||||||| |||  || | | |||||||||||||||||||    
T  16461037 ctttccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 16461085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 161 - 309
Target Start/End: Original strand, 46693585 - 46693734
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| | |||| ||| |||||||||||||||| | ||||||||||||| || ||||||||||||||| ||||||||||||||| || | | ||    
T  46693585 gtgtaacatcccaaactgctttcaggattgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcataccgggaa 46693684  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | || ||||||||||||| |||  || | | |||||||||||||||||||    
T  46693685 actttccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 46693734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 38341201 - 38341053
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | | |||||||||||||| ||||| ||||||||| |||||||||||||||||| | | |||    
T  38341201 tgtaacatcccagactgctttcaggattgccgactgaccccataaaccaacacgagtcttttccgcgtgttttgtcctcactcgcacgcttaccgggaaa 38341102  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||| |||||||||| |||  || | | |||||||||||||||||||    
T  38341101 cttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgctt 38341053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 50002558 - 50002706
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||||||||   ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | |  ||    
T  50002558 tgtaacatcctagacgactttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggggaa 50002657  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||| | |||  || | | ||||||||||| |||||||    
T  50002658 cttcccggtaggtcatccatcccaaaattgctccaagtcaaacacgctt 50002706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 52250501 - 52250385
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  52250501 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 52250402  T
Q  261 tttcccggtaggtcacc 277  Q
     ||||||||||||||||    
T  52250401 cttcccggtaggtcacc 52250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 52250838 - 52250690
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| || |||||||||| |||| | | |||    
T  52250838 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaa 52250739  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | || ||||||||||||||||    
T  52250738 cttcccggtaggtcacccatcccaaaattgcttcaagtcaagcacgctt 52250690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 52251175 - 52251027
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| || |||||||||| |||| | | |||    
T  52251175 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaa 52251076  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | || ||||||||||||||||    
T  52251075 cttcccggtaggtcacccatcccaaaattgcttcaagtcaagcacgctt 52251027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 20060191 - 20060307
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||| || |||||| ||| ||||||| |||||||| | |||||||||||||||| ||| || |||||||| |||||||||||||||||| | |||||    
T  20060191 tgtaacaccccagactgctttcaggattgccgactgaccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcgcacgcttaccggaaaa 20060290  T
Q  261 tttcccggtaggtcacc 277  Q
     ||||||||||||||||    
T  20060291 cttcccggtaggtcacc 20060307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 306
Target Start/End: Original strand, 35759458 - 35759604
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaa 259  Q
    |||||||| || |||||  ||| | ||||| |||||||| | | |||||||||||||| ||||||||||||||| |||||||||||||||||| || |||    
T  35759458 gtgtaacaccccagactactttcatgattgccgactgaccccaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaa 35759557  T
Q  260 atttcccggtaggtcacctatcttaagaata-ctccaagtcaagcacg 306  Q
    | |||||||||||||||| |||  || |||| ||||||||||||||||    
T  35759558 acttcccggtaggtcaccaatcccaa-aatagctccaagtcaagcacg 35759604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 7547907 - 7547791
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggtcacctatcttaa 285  Q
    ||||||||||||| ||||||| |||||||||  ||||||| ||||||| |||| |||||||||||||||| |||| || ||||||||||||| |||  ||    
T  7547907 attgtcgactgaccctacaaatcaacacgagacttttcagtgtgttttgtccttactcgcacgcttatcgaaaaactttccggtaggtcacccatccaaa 7547808  T
Q  286 gaatactccaagtcaag 302  Q
     | ||||||||||||||    
T  7547807 cactactccaagtcaag 7547791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 7229794 - 7229892
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaa 260  Q
    |||||||||||||||||||||   ||||| ||||| || | ||||| ||||||||||||||||||| |||||||||||||||  ||||||| |||||||    
T  7229794 tgtaacatcctagactgttttcttgattgacgactcaccccacaaagcaacacgagttttttcagcatgttttatcctcactttcacgcttttcgaaaa 7229892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 35759915 - 35760003
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgc 250  Q
    |||||||||| |||||| ||| | ||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  35759915 tgtaacatcccagactgctttcatgattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcgctcgcacgc 35760003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 43056941 - 43057064
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaa 285  Q
    |||| |||||||| |||||||||||||| ||||||||||| ||||||| |||||||||||| ||||| | | ||| ||||| |||||||||| |||  ||    
T  43056941 attgccgactgaccctacaaaccaacacaagttttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccagtaggtcacccatccaaa 43057040  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    ||  |||| ||||||| |||||||    
T  43057041 gaccactctaagtcaatcacgctt 43057064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 49996531 - 49996613
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactc 244  Q
    |||||||||  |||||| ||||||||||| |||||||| | |||||| |||| |||| ||||||||||||||| |||||||||    
T  49996531 tgtaacatctcagactgcttttaggattgccgactgaccccacaaactaacaagagtcttttcagcgtgttttgtcctcactc 49996613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 31822970 - 31823086
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| ||| || |||  ||||||  ||||||| | ||||| |||||||||| |||||||| |||||| |||||||||||| ||||| ||| |||    
T  31822970 tgtaacatcccagaatgctttctggattgctgactgaccccacaaatcaacacgagtcttttcagcatgttttgtcctcactcgcatgcttaccgagaaa 31823069  T
Q  261 tttcccggtaggtcacc 277  Q
     ||||| ||||||||||    
T  31823070 cttcccagtaggtcacc 31823086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 51372749 - 51372873
Alignment:
Q  186 gattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggtcacctatctta 284  Q
    ||||| ||| |||| | |||||||||||||||| |||||||||  |||| |||||||||||||||||| || |||| |||| | ||||||||| |||  |    
T  51372749 gattgccgattgaccccacaaaccaacacgagtcttttcagcggattttgtcctcactcgcacgcttaccgaaaaacttcctgataggtcacccatccca 51372848  T
Q  285 agaatactccaagtcaagcacgctt 309  Q
    | | | ||| |||||||||||||||    
T  51372849 aaattgctcaaagtcaagcacgctt 51372873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 43057405 - 43057522
Alignment:
Q  193 gactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacctatcttaagaatac 291  Q
    |||||||  ||||||||||||| ||| |||| |||||||||| | ||||||| || ||||| | | ||| ||||| |||||||||| |||  ||||  ||    
T  43057405 gactgacaatacaaaccaacacaagtctttttagcgtgttttgttctcactcacatgcttaccgggaaacttcccagtaggtcaccgatccaaagaccac 43057504  T
Q  292 tccaagtcaagcacgctt 309  Q
    |||||||||| |||||||    
T  43057505 tccaagtcaatcacgctt 43057522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 35009859 - 35009939
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcac 242  Q
    |||||||||| ||||   ||| || |||| |||||||| |||||||| |||| |||||||||||| ||||||| |||||||    
T  35009859 tgtaacatcccagacgactttgagcattgccgactgaccctacaaacgaacatgagttttttcagtgtgttttgtcctcac 35009939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 28181357 - 28181416
Alignment:
Q  175 actgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    |||| ||| ||||||||| |||| ||| |||||||||||||||| ||||||| |||||||    
T  28181357 actgctttcaggattgtcaactgcctccacaaaccaacacgagtcttttcagagtgtttt 28181416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 39582636 - 39582553
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcg 245  Q
    |||||||||| | |||  ||| || |||| |||||||  ||||||||||| |||||| || |||||||||||| ||||||||||    
T  39582636 tgtaacatcccaaactactttaagcattgccgactgatcctacaaaccaaaacgagtcttctcagcgtgttttgtcctcactcg 39582553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 16440471 - 16440520
Alignment:
Q  203 acaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    ||||||||||||  ||||||| ||||||||| ||||||||||| ||||||    
T  16440471 acaaaccaacacatgtttttttagcgtgtttaatcctcactcgtacgctt 16440520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 19261 - 19113
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||| |||||||| | | |||    
T  19261 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaa 19162  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  19161 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 19113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 2061 - 2209
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   |||||||||||||||||||| | |||||||||||||||| ||||||  ||||||| |||||||||||||||||| | |||||    
T  2061 tgtaacatcccagacaacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttgtcctcactcgcacgcttaccggaaaa 2160  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  2161 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 69; Significance: 6e-31; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 162985 - 163133
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaa 260  Q
    |||||||||| |||||||||| ||||||| |||||| | | |||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||| |||    
T  162985 tgtaacatcccagactgttttcaggattgccgactggccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgaacgcttaccgagaaa 163084  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||| ||||||||| |||  || | | |||||||||||||||||||    
T  163085 cttcccgataggtcacccatcccaaaattgctccaagtcaagcacgctt 163133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 163370 - 163218
Alignment:
Q  158 taagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta-tcg 256  Q
    |||||||||||||| ||||   ||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| | |    
T  163370 taagtgtaacatcccagacgactttcaggattgtcgacagaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgg 163271  T
Q  257 aaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||| ||| |||||||||||| |||  || | | |||||||||||||||||||    
T  163270 gaaacttctcggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 163218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 162531 - 162677
Alignment:
Q  165 aacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagt-tttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatt 262  Q
    ||||||| | |||| ||| ||||||| |||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||| |    
T  162531 aacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtctttttcagcgtgttttgtcctcactcgcacgcttatcgcgaaact 162630  T
Q  263 tcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||| ||||||||||  |||  ||   | |||||||||||||||||||    
T  162631 tccaggtaggtcactcatcccaaagttgctccaagtcaagcacgctt 162677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 69666 - 69756
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctt 252  Q
    |||||||||| | |||| ||| ||||||| |||||||  | |||||||||||||||| |||| |||||| ||| || |||||| |||||||    
T  69666 tgtaacatcccaaactgctttcaggattgccgactgaaccaacaaaccaacacgagtctttttagcgtggtttgtcatcactcacacgctt 69756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 2395 - 2300
Alignment:
Q  158 taagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    ||||||||| |||| |||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  2395 taagtgtaaaatcccagactgcttttaggattgtcgactgatcctacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgctta 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 1920 - 2050
Alignment:
Q  180 ttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacct 278  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||| |||| |||||||||||||||||| | | ||| ||||||||||||||||     
T  1920 ttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaccc 2019  T
Q  279 atcttaagaatactccaagtcaagcacgctt 309  Q
    |||  || | | |||||||||||||||||||    
T  2020 atcccaaaattgctccaagtcaagcacgctt 2050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 606 - 457
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| |||||  ||||||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||| || ||||||| | ||    
T  606 gtgtaacatccgagactacttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttatcgggaa 507  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||| |||  || | | ||||| |||||||||||||    
T  506 acttcccggtaggtcacccatcccaaaattgctccatgtcaagcacgctt 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 159 - 309
Target Start/End: Original strand, 1549 - 1700
Alignment:
Q  159 aagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-ga 257  Q
    ||||||||||||| |||||| ||| |||||| ||||||||| | |||||||||||||||| |||| |||||||||| ||||||||| || ||||| | |     
T  1549 aagtgtaacatcccagactgctttcaggattatcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcacatgcttaccggg 1648  T
Q  258 aaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    ||| |||||||||||||||| |||  || | | |||||||||||||||||||    
T  1649 aaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 1700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 13382 - 13532
Alignment:
Q  160 agtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-a 258  Q
    ||||||||||||  ||||| ||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||   | |    
T  13382 agtgtaacatcccggactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacaaaga 13481  T
Q  259 aatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||| |||  || | | ||| |||||||||||||||    
T  13482 aacttcccggtaggtcacccatcccaaaattgctcaaagtcaagcacgctt 13532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 161 - 309
Target Start/End: Original strand, 14552 - 14701
Alignment:
Q  161 gtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaa 259  Q
    ||||||||||| |||||| ||| || ||||||| ||||| | |||||||||||||||| |||||||| |||||| ||||||||||||| |||| | | ||    
T  14552 gtgtaacatcccagactgctttcagcattgtcggctgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaa 14651  T
Q  260 atttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | |||||||||||||||| |||  || | | |||||||||||||||||||    
T  14652 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgctt 14701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 157 - 309
Target Start/End: Original strand, 107309 - 107462
Alignment:
Q  157 gtaagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc- 255  Q
    ||||||||||||||| |||||| ||| || || | |||||||| | |||||||||||||||| |||||||| |||||| |||||||||||||||||| |     
T  107309 gtaagtgtaacatcccagactgctttcagaatagccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccg 107408  T
Q  256 gaaaatttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    | ||| ||||||||| |||||| |||  || | | |||||||||||||||||||    
T  107409 ggaaacttcccggtacgtcacccatcccaaaattgctccaagtcaagcacgctt 107462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 165 - 309
Target Start/End: Complemental strand, 155049 - 154904
Alignment:
Q  165 aacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaattt 263  Q
    ||||||| |||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||| |||| |||| ||| ||| ||    
T  155049 aacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactagcacacttaccgagaaactt 154950  T
Q  264 cccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||||||||||||| ||   || | | |||||||||||||||||||    
T  154949 cccggtaggtcacccattccaaaattgctccaagtcaagcacgctt 154904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 154597 - 154506
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgctta 253  Q
    |||||||||| |||||| ||| || ||||||||||||| | ||||| |||||||||| ||||||||||||||| ||||||||||||| ||||    
T  154597 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacactta 154506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 10594 - 10447
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    ||||||||||  ||||  ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  10594 tgtaacatccccgactactttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaa 10495  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |||||||||||||||| |||  || | | |||||||||||||||||||    
T  10494 cttcccggtaggtcacccatc-caaaattgctccaagtcaagcacgctt 10447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 5315 - 5199
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| ||||   ||| || ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  5315 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 5216  T
Q  261 tttcccggtaggtcacc 277  Q
    ||||| |||||||||||    
T  5215 tttccaggtaggtcacc 5199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 4830 - 4739
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaatttcccggtaggtcacc 277  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| |||| | | ||| ||||||||||||||||    
T  4830 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacc 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 5418 - 5326
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtg-ttttatcctcactcgcacgctta 253  Q
    |||||||||||||||   ||| || |||||||||| || |||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  5418 tgtaacatcctagacgactttaagcattgtcgacttaccctacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacactta 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 3037 - 2889
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||| |||||| ||| || |||| |||||||| | ||||| |||||||||| ||||||||||||||| ||||||||||||| |||| | | |||    
T  3037 tgtaacatccgagactgctttcagcattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 2938  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||||||||||||| || |||  || | | |||||||||||||||||||    
T  2937 cttcccggtaggtctcccatcccaaaattgctccaagtcaagcacgctt 2889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 17449 - 17597
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcgaaaat 261  Q
    |||||||| | ||||  |||| || |||| |||||||| |||  ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||     
T  17449 tgtaacattccagacgattttaagtattgccgactgaccctatgaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaa 17548  T
Q  262 ttcccg-gtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     |  || |||||||||| |||  |||| |||||||||||||||||||||    
T  17549 ctttcgagtaggtcacccatccaaagagtactccaagtcaagcacgctt 17597  T

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Target: scaffold0047; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 18011 - 18134
Alignment:
Q  187 attgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcg-aaaatttcccggtaggtcacctatcttaa 285  Q
    |||||||| |||| ||||||| |||||||||| ||||||||||||| | |||||||||||||| ||| || |||| || ||  ||||||||| |||  ||    
T  18011 attgtcgattgaccctacaaatcaacacgagtcttttcagcgtgttgtgtcctcactcgcacgtttaccgaaaaactttccaataggtcacccatccaaa 18110  T
Q  286 gaatactccaagtcaagcacgctt 309  Q
    || |||||||||||||||||||||    
T  18111 gactactccaagtcaagcacgctt 18134  T

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Target: scaffold0024 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 162 - 309
Target Start/End: Complemental strand, 106015 - 105867
Alignment:
Q  162 tgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatc-gaaaa 260  Q
    |||||||||  |||||| ||| || |||| |||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||| | | |||    
T  106015 tgtaacatctcagactgctttcagaattgccgactgaccctataaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaa 105916  T
Q  261 tttcccggtaggtcacctatcttaagaatactccaagtcaagcacgctt 309  Q
     ||| |||||||||||  |||  || | | |||||||||||||||||||    
T  105915 cttctcggtaggtcacacatcccaaaattgctccaagtcaagcacgctt 105867  T

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Target: scaffold0005 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 309
Target Start/End: Complemental strand, 245364 - 245229
Alignment:
Q  175 actgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacgcttatcga-aaatttcccggtaggt 273  Q
    |||| ||| ||||||| |||||||| |  ||||||||||||||| |||||| |||||||| ||||||||| |||||||  ||| ||| ||||| | ||||    
T  245364 actgctttcaggattgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggt 245265  T
Q  274 cacctatcttaagaatactccaagtcaagcacgctt 309  Q
    |||| |||| || | | ||| |||||||||||||||    
T  245264 cacccatctcaaaattgctctaagtcaagcacgctt 245229  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 245831 - 245761
Alignment:
Q  174 gactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgttttatcctcactc 244  Q
    ||||| ||| ||||||  |||||||| | |||||||||||||||| |||||| |||||||| |||||||||    
T  245831 gactgctttcaggattcccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactc 245761  T

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Target: scaffold0442 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 74 - 1
Alignment:
Q  158 taagtgtaacatcctagactgtttttaggattgtcgactgactctacaaaccaacacgagttttttcagcgtgt 231  Q
    ||||| |||||||| | |||| ||||||||||| | |||||| |||||||||||||||||| ||||||||||||    
T  74 taagtctaacatcccaaactgcttttaggattgcctactgaccctacaaaccaacacgagtcttttcagcgtgt 1  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 37203 - 37251
Alignment:
Q  201 ctacaaaccaacacgagttttttcagcgtgttttatcctcactcgcacg 249  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||||    
T  37203 ctacaaaccaacacgaatcttttcagcgtgtttttccctcactcgcacg 37251  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 62980 - 63030
Alignment:
Q  184 aggattgtcgactgactctacaaaccaacacgagttttttcagcgtgtttt 234  Q
    ||||||| |||||||| | ||||||||| |||||| |||||||||||||||    
T  62980 aggattgccgactgaccccacaaaccaatacgagtcttttcagcgtgtttt 63030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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