View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1845_high_16 (Length: 289)
Name: NF1845_high_16
Description: NF1845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1845_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 1577784 - 1578050
Alignment:
| Q |
7 |
gtagcataggagaataacagtttttaaacaaactactattttttgtgatccatgattcacaacactgatcacaacaaggattgtttggggggtagggcaa |
106 |
Q |
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| T |
1577784 |
gtagcataggagaataacagtttttaaacaaactacaattttttgtgatccatgattcacaacactgatcacaacaaggattgtttggggggtagggcaa |
1577883 |
T |
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| Q |
107 |
aaagaaactgaaagcatcaaactttgggaaggaggggaatacatggaaaggaattaggtgagctataacatttcatttaaagtagtaactagtaatcact |
206 |
Q |
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| T |
1577884 |
aaagaaactgaaagcatcaaactttgggaaggaggggaatacatggaaaggaattaggtgagctataacatttcatttaaagtagtaactagtaatcact |
1577983 |
T |
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| Q |
207 |
cactaattgaatgctcttaatcccccatacatcaatgtccaagattaaaaaattaaattgagaaaac |
273 |
Q |
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| T |
1577984 |
cactaattgaatgctcttaatcccccatacatcaatgtccaagattaaaaaaataaattgagaaaac |
1578050 |
T |
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