View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1845_high_21 (Length: 251)
Name: NF1845_high_21
Description: NF1845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1845_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 33934114 - 33934344
Alignment:
| Q |
12 |
atatatataattcaccttaaactgataaaggggcattgaaaaaaggaaatatttttgtgtttcaatgcaattagttgaaagaagaagtacctgactctac |
111 |
Q |
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| T |
33934114 |
atatatataattcaccttaaactgataaaggggcattgaaaaaaggaaatatttttgtgtttcaatgcaattagttgaaagaagaagtacctgactctac |
33934213 |
T |
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| Q |
112 |
gcaaatgggacaactcagtagaagtttgaatggctttgagcttttcttgagacacacgtgtctgaatatcatgcagccttctagaatgttccaaaatctg |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
33934214 |
gcaaatgggacaactcagtagaagtttgaatggctttgagcttttcttgagacacacatgtctgaatatcatgcagccttctagaatgttccaaaatctg |
33934313 |
T |
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| Q |
212 |
gctctcctttctcagcacaaccctcctatga |
242 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
33934314 |
gctctcctttctcagcacaaccctcctatga |
33934344 |
T |
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