View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1845_high_39 (Length: 202)
Name: NF1845_high_39
Description: NF1845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1845_high_39 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 13736495 - 13736668
Alignment:
| Q |
14 |
cataggcaaggaaattcggaaactgaatatttaggcatacctcccaaacaataagacaatcctgattgaatcctttctgaccctttttagtgaacacaca |
113 |
Q |
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| T |
13736495 |
catagacaaggaaattcggaaactgaatatttaggcatacctcccaaacaataagacaatcctgattgaatcctttctgaccctttttagtgaacacaca |
13736594 |
T |
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| Q |
114 |
ggaaaaattgttggacttgtcagactttacaattccagatgaactcaacaacatttcattcttctttgcttcct |
187 |
Q |
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| T |
13736595 |
ggaaaaattgttggacttgtcagactttacaattccagatgaactcaacaacatttcattcttctttgcttcct |
13736668 |
T |
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