View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1845_low_38 (Length: 224)
Name: NF1845_low_38
Description: NF1845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1845_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 30853232 - 30853024
Alignment:
| Q |
1 |
aatgtatattggaaataatggacagtgagaaagggagaactatcaagagcaatgccatgaaattgaaggatttggcatcaaatgctgttggtgttggggg |
100 |
Q |
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| T |
30853232 |
aatgtatattggaaataatggacagtgagaaagggagaactatcaagagcaatgccatgaaattgaaggatttggcatcaaatgctgttggtgttggggg |
30853133 |
T |
|
| Q |
101 |
aagtactcatcaaaatattactgaatttgtgaatagtttgtttcattttgcaagttacaagcagacaatcacaaattaatttttgatcaactgaacattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
30853132 |
aagtactcatcaaaatattactgaatttgtgaatagtttgtttcattttgcaagttacaagcagacaatcacaaattaattcttgatcaactgaacattt |
30853033 |
T |
|
| Q |
201 |
ctttgttgt |
209 |
Q |
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||||||||| |
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| T |
30853032 |
ctttgttgt |
30853024 |
T |
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