View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18460_low_9 (Length: 293)
Name: NF18460_low_9
Description: NF18460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18460_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 28604432 - 28604167
Alignment:
| Q |
13 |
aatataattagataacattgaccttgtagtatatgatgtgaggccatgagggagtgttttgaaaataaacattgaaaagagaacacttgaaaatagtgta |
112 |
Q |
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| T |
28604432 |
aatataattagataacattgaccttgtagtatatgatgtgaggccatgagggagtgttttgaaaataaacattgaaaagagaacacttgaaaatagtgta |
28604333 |
T |
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| Q |
113 |
taaaagaagatacatctaatctaacaagccttacaaactgattttataagaacaagttaccttccattnnnnnnntataagatagtgaagaataataacg |
212 |
Q |
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| T |
28604332 |
taaaagaagatacatctaatctaacaagccttacaaactgattttataagaacaagttaccttccattaaaaaaatataagatagtgaagaataataaca |
28604233 |
T |
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| Q |
213 |
tggagctcatgaaagttgcatgtatatttttcacatgataatgcatactatacttatatatgtata |
278 |
Q |
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| T |
28604232 |
tggagctcatgaaagttgcatgtatatttttcacatgataatgcatactatacttatatatgtata |
28604167 |
T |
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