View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18464_high_12 (Length: 257)
Name: NF18464_high_12
Description: NF18464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18464_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8797938 - 8797693
Alignment:
| Q |
1 |
taacccttcttctgtaactcaaccttcatctctctctctacataccccgcgtgcactctactgctttctcgctccttcataaaaaaccttgtattatcca |
100 |
Q |
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| T |
8797938 |
taacccttcttctgtaactcaaccttcatctctctctctacatatcccgcgtgcactctactgctttctcactccttcataaaaaaccttgtattatcca |
8797839 |
T |
|
| Q |
101 |
ctagctagagagacaaagagagattcatttcttcattaaatgctgaaaatgtgtggaaagagagattaacactcattttccaaaggaaatctgtgcaggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8797838 |
ctagctagagagacaaagagagattcatttcttcattaaatgctgaaaatgtgtggaaagagagattaacactcattttccaaaggaaatctgtgcaggc |
8797739 |
T |
|
| Q |
201 |
ttttgccagtagtagaatccaaaaaacctcttcactacttcttcat |
246 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8797738 |
ttttgccagtagtagaatccaaaaaacctcttcactacttcttcat |
8797693 |
T |
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