View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18464_low_9 (Length: 327)
Name: NF18464_low_9
Description: NF18464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18464_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 12 - 314
Target Start/End: Complemental strand, 34570811 - 34570509
Alignment:
| Q |
12 |
caaaggagttgaaattatcaaggattacttggagaagaaggaaaaggaagtaggaaaaaaggtaagcacaatcttcatcataccccatgtatatatgatt |
111 |
Q |
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| T |
34570811 |
caaaggagttgcaattatcaaggattacttggagaagaaggaaaaggaagtaggaaaaaaggtaagcacaatcttcatcataccccatgtatatatgatt |
34570712 |
T |
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| Q |
112 |
atgtgaatatatttgaatatgtcatagactcttagtcatagaacaataagaaattaactaattattgtttctgactattgagggttctattgcagttcaa |
211 |
Q |
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| T |
34570711 |
atgtgaatatatttgaatatgtcatagactcttagtcatagaacaataagaaattaactaattattgtttctgactattgagggttctattgcagttcaa |
34570612 |
T |
|
| Q |
212 |
tcttccatcacctcaaaggaattctacattccagaaattgtttgggttgcctccagaagaatttctaatcaatgatttcacatgttccctgaagagaaaa |
311 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34570611 |
tcttccatcacctcaaaggaattctacattccagaaattgtttgggttgccaccagaagaatttctaatcaatgatttcacatgttccctgaagagaaaa |
34570512 |
T |
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| Q |
312 |
ttg |
314 |
Q |
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||| |
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| T |
34570511 |
ttg |
34570509 |
T |
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