View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18465_high_10 (Length: 391)
Name: NF18465_high_10
Description: NF18465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18465_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 23 - 373
Target Start/End: Original strand, 14927863 - 14928212
Alignment:
| Q |
23 |
cagaaagttggttctacgcattcgcagaagggatctataccaggtcagccatacagtgaagtacctgataaatttttgacctattcttattttggtgaca |
122 |
Q |
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| T |
14927863 |
cagaaagttggttctacgcattcgcagaagggatctataccaggtcagccatacagtgaagtaactgataaatttttgacctattcttattttggtgaca |
14927962 |
T |
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| Q |
123 |
ctatttctgataggtagagagaatttaatatttgtgcagacagtaatgataatacataaataccatgtgctgacaaattgacacaaacatttactccatt |
222 |
Q |
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| T |
14927963 |
ctatttctgataggtagagagaatttaatatttgtgcaaacagtaatgata-tacataaataccatgtgctgacaaattgacacaaacatttactccatt |
14928061 |
T |
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| Q |
223 |
ttgtagttatgcaatgaattttctgttccaaaggaaaaactagacaacttcaaaagcatcacaccccaagacattgtttgttcccaggttgaaaaaacta |
322 |
Q |
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| T |
14928062 |
ttgtagttatgcaatgaattttctgttccaaaggaaaaactagacaacttcaaaagcatcacaccccaagacattgtctgttcccaggttgaaaaaacta |
14928161 |
T |
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| Q |
323 |
tagtaataagtgtccttttcattcagtatatgtacatgcctgcctatcttc |
373 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
14928162 |
tagtaataagtgtccttttcattcagcatatgtacatgcctgcctatcttc |
14928212 |
T |
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