View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18465_high_20 (Length: 291)
Name: NF18465_high_20
Description: NF18465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18465_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 12 - 276
Target Start/End: Complemental strand, 36810512 - 36810248
Alignment:
| Q |
12 |
atcatcaacttgtatgattaaatcattagcagaacttgccctggcaatcctgcatcaagaaaatgagacatctaagtatttatcttccgtaaaaacgtat |
111 |
Q |
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| T |
36810512 |
atcaccaacttgtatgattaaatcattagtagaacttgccctggcaatcctgcatcaagaaaatgagacatctaagtatttatcttccgcaaaaacgtat |
36810413 |
T |
|
| Q |
112 |
atatattattcaattatgacatgtttgggaggttaaaaatgtttaccagttttgatttttccgttttaaggaatcagcaactataggaacattagctggt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36810412 |
atatattattcaattatgacatgtttgggaggttaaaaatgtttaccagttttgatttttccgttttaaggaatcagcaactataggaacattagctggt |
36810313 |
T |
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| Q |
212 |
agaacaacgcatcggttacgctttcctccactcaagacattttcacagtcaagaattttcatggt |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36810312 |
agaacaacgcatcggttacgctttcctccactcaagacattttcacagtcaagaattttcatggt |
36810248 |
T |
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