View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18465_high_7 (Length: 452)
Name: NF18465_high_7
Description: NF18465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18465_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 12 - 436
Target Start/End: Complemental strand, 10033568 - 10033145
Alignment:
| Q |
12 |
agagagaagaaaggaagaaaaatatcatgtgaattatgtaagacaaaattacattatagtaacataaacttcactagaaaacatgacatactttatttag |
111 |
Q |
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| T |
10033568 |
agagagaagaaaggaagaaaa-tatcatgtgaattatgtaagacaaaattacattatagtaacataaacttcactagaaaacatgacatactttatttag |
10033470 |
T |
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| Q |
112 |
atataacactttccaagaataaacaacaatcaaattactcttgaaattagctttaagagccaagaacaagaaaacaagtatgaaaggaaaaatcaaaagt |
211 |
Q |
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| T |
10033469 |
atataacactttccaagaataaacaacaatcaaattactcttgaaattagctttaagagccaagaacaagaaaacaagtatgaaaggaaaaatcaaaagt |
10033370 |
T |
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| Q |
212 |
aacatatattattattatcacttgatctacttcaagtgatataaagatgaagatcaagaacaacaaagaacaacatgagaagcaaaccataaagaacagt |
311 |
Q |
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| T |
10033369 |
aacatatattattattatcacttgatctacttcaagtgatataaagatgaagatcaagaacaacaaagaacaacatgagaagcaaaccataaagaacagt |
10033270 |
T |
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| Q |
312 |
gtgtacaaaaattgatgcaatagttgtcttcatattcataaactccaatggtgaattcttccctggaagctgaaaaatcattcctggtgataatagccaa |
411 |
Q |
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| T |
10033269 |
gtgtacaaaaattgatgcaatagttgtcttcatattcataaactccaatggtgaattcttccctggaagctgaaaaatcattcctggtgataatagccaa |
10033170 |
T |
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| Q |
412 |
aatagagctgcagctatgagaggag |
436 |
Q |
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|||| |||||||||||||||||||| |
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| T |
10033169 |
aataaagctgcagctatgagaggag |
10033145 |
T |
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