View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18466_high_6 (Length: 425)

Name: NF18466_high_6
Description: NF18466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18466_high_6
NF18466_high_6
[»] chr8 (32 HSPs)
chr8 (231-407)||(4611674-4611850)
chr8 (104-167)||(34897085-34897148)
chr8 (104-162)||(4786339-4786397)
chr8 (99-161)||(11803254-11803316)
chr8 (104-162)||(11927087-11927145)
chr8 (21-73)||(4611449-4611501)
chr8 (112-167)||(12606825-12606880)
chr8 (112-167)||(13844592-13844647)
chr8 (112-163)||(14134707-14134758)
chr8 (104-167)||(31109514-31109577)
chr8 (104-162)||(11944665-11944723)
chr8 (112-166)||(20679392-20679446)
chr8 (99-160)||(4611529-4611590)
chr8 (97-162)||(25566834-25566899)
chr8 (104-193)||(31556997-31557085)
chr8 (110-167)||(33405380-33405437)
chr8 (104-156)||(24362209-24362261)
chr8 (102-162)||(24669431-24669491)
chr8 (112-160)||(31236580-31236628)
chr8 (104-160)||(39954282-39954338)
chr8 (112-167)||(3025559-3025614)
chr8 (104-163)||(28384994-28385053)
chr8 (112-163)||(29447110-29447161)
chr8 (105-163)||(33382019-33382077)
chr8 (112-161)||(7658471-7658520)
chr8 (98-155)||(14731706-14731763)
chr8 (104-199)||(26714050-26714143)
chr8 (114-167)||(38079009-38079062)
chr8 (104-157)||(41831946-41831999)
chr8 (103-143)||(18067954-18067994)
chr8 (122-162)||(26902176-26902216)
chr8 (113-161)||(40332200-40332248)
[»] chr5 (28 HSPs)
chr5 (104-199)||(28588638-28588733)
chr5 (98-162)||(6471890-6471954)
chr5 (105-184)||(30502367-30502446)
chr5 (105-184)||(30542710-30542789)
chr5 (104-162)||(3966503-3966561)
chr5 (97-154)||(24273039-24273096)
chr5 (97-154)||(24389118-24389175)
chr5 (99-193)||(42893355-42893449)
chr5 (105-162)||(36838544-36838601)
chr5 (104-156)||(7175026-7175078)
chr5 (98-162)||(41091258-41091322)
chr5 (105-156)||(12264836-12264887)
chr5 (112-167)||(16203791-16203846)
chr5 (102-157)||(23015995-23016050)
chr5 (104-162)||(2436922-2436980)
chr5 (104-162)||(11685939-11685997)
chr5 (112-162)||(13287400-13287450)
chr5 (112-162)||(39205888-39205938)
chr5 (114-163)||(14873527-14873576)
chr5 (114-167)||(18421837-18421890)
chr5 (112-173)||(21191046-21191107)
chr5 (112-156)||(9449477-9449521)
chr5 (99-167)||(12927649-12927717)
chr5 (98-138)||(19746717-19746757)
chr5 (99-159)||(26609348-26609408)
chr5 (104-156)||(27144463-27144515)
chr5 (107-159)||(30098329-30098381)
chr5 (102-162)||(32630736-32630796)
[»] chr7 (35 HSPs)
chr7 (104-162)||(1433454-1433512)
chr7 (99-183)||(20549786-20549870)
chr7 (106-160)||(2425736-2425790)
chr7 (104-162)||(22602711-22602769)
chr7 (112-167)||(5835255-5835310)
chr7 (104-167)||(28155570-28155633)
chr7 (104-167)||(32287459-32287522)
chr7 (104-162)||(19206050-19206108)
chr7 (104-162)||(32308120-32308178)
chr7 (112-193)||(21880160-21880241)
chr7 (114-162)||(9482944-9482992)
chr7 (98-162)||(16341490-16341554)
chr7 (103-159)||(27732243-27732299)
chr7 (112-167)||(3721101-3721156)
chr7 (104-167)||(22484025-22484088)
chr7 (104-167)||(23191896-23191959)
chr7 (104-167)||(26733304-26733367)
chr7 (104-167)||(27093409-27093472)
chr7 (104-167)||(27184829-27184892)
chr7 (112-167)||(37870901-37870956)
chr7 (102-160)||(3520345-3520403)
chr7 (104-162)||(5548676-5548734)
chr7 (112-162)||(7328692-7328742)
chr7 (107-161)||(17851434-17851488)
chr7 (112-162)||(19992009-19992059)
chr7 (112-174)||(22868050-22868112)
chr7 (104-158)||(26329387-26329441)
chr7 (98-155)||(8160410-8160467)
chr7 (112-161)||(15902830-15902879)
chr7 (104-145)||(29787387-29787428)
chr7 (103-172)||(42720881-42720950)
chr7 (125-165)||(640134-640174)
chr7 (102-138)||(11700801-11700837)
chr7 (103-159)||(38134410-38134466)
chr7 (111-167)||(38143230-38143286)
[»] chr6 (33 HSPs)
chr6 (105-185)||(7265571-7265651)
chr6 (104-167)||(5732506-5732569)
chr6 (104-167)||(19040352-19040415)
chr6 (104-222)||(7377979-7378096)
chr6 (112-162)||(9025495-9025545)
chr6 (104-162)||(9027178-9027236)
chr6 (98-151)||(5462680-5462733)
chr6 (115-172)||(13360363-13360420)
chr6 (153-225)||(5000554-5000625)
chr6 (107-162)||(9617437-9617492)
chr6 (104-167)||(9658879-9658942)
chr6 (112-163)||(11784216-11784267)
chr6 (105-167)||(31579223-31579283)
chr6 (104-162)||(9629383-9629441)
chr6 (112-161)||(7086803-7086852)
chr6 (105-158)||(30866149-30866202)
chr6 (104-156)||(17341671-17341723)
chr6 (102-162)||(32320670-32320730)
chr6 (102-162)||(32511667-32511727)
chr6 (104-167)||(13851736-13851799)
chr6 (112-163)||(19044472-19044523)
chr6 (112-167)||(21924931-21924986)
chr6 (112-162)||(7996379-7996429)
chr6 (112-162)||(8022372-8022422)
chr6 (112-162)||(9195755-9195805)
chr6 (104-162)||(20371111-20371169)
chr6 (116-162)||(26562701-26562747)
chr6 (112-162)||(34073348-34073398)
chr6 (116-157)||(11591876-11591917)
chr6 (97-162)||(14155240-14155305)
chr6 (98-167)||(28715289-28715358)
chr6 (112-192)||(16833316-16833396)
chr6 (118-162)||(17327656-17327700)
[»] chr2 (28 HSPs)
chr2 (98-162)||(44860314-44860378)
chr2 (112-182)||(5367200-5367270)
chr2 (104-165)||(18276521-18276582)
chr2 (99-160)||(23718021-23718082)
chr2 (99-160)||(24105693-24105754)
chr2 (105-161)||(39279676-39279732)
chr2 (104-155)||(21616762-21616813)
chr2 (105-167)||(31018591-31018653)
chr2 (104-162)||(37411245-37411303)
chr2 (107-167)||(34691801-34691861)
chr2 (107-167)||(34714213-34714273)
chr2 (112-167)||(5473336-5473391)
chr2 (122-173)||(20242717-20242768)
chr2 (104-191)||(30404822-30404909)
chr2 (112-159)||(30471046-30471093)
chr2 (105-156)||(35449514-35449565)
chr2 (99-162)||(42832277-42832340)
chr2 (105-162)||(2331795-2331850)
chr2 (112-162)||(18889592-18889642)
chr2 (104-162)||(24975326-24975384)
chr2 (112-150)||(25846749-25846787)
chr2 (104-162)||(28677909-28677966)
chr2 (105-159)||(30527599-30527653)
chr2 (117-163)||(38355887-38355933)
chr2 (112-193)||(2415325-2415406)
chr2 (105-193)||(18570973-18571061)
chr2 (105-145)||(22084850-22084890)
chr2 (105-145)||(28412351-28412391)
[»] chr1 (48 HSPs)
chr1 (104-167)||(2896117-2896180)
chr1 (99-161)||(1864882-1864944)
chr1 (105-167)||(9709821-9709883)
chr1 (115-185)||(43492472-43492542)
chr1 (98-162)||(34371708-34371771)
chr1 (104-167)||(36878461-36878524)
chr1 (98-173)||(40181865-40181940)
chr1 (112-161)||(10572591-10572640)
chr1 (104-193)||(21530689-21530778)
chr1 (98-162)||(29229455-29229520)
chr1 (95-167)||(5898262-5898334)
chr1 (114-162)||(44482240-44482288)
chr1 (104-167)||(2784556-2784619)
chr1 (99-162)||(38503315-38503378)
chr1 (98-193)||(40258903-40258998)
chr1 (112-162)||(7918212-7918262)
chr1 (99-161)||(17754306-17754368)
chr1 (104-162)||(20157351-20157409)
chr1 (105-167)||(28674801-28674863)
chr1 (105-162)||(6427351-6427408)
chr1 (104-161)||(13997883-13997940)
chr1 (104-157)||(17831537-17831590)
chr1 (112-193)||(22515857-22515938)
chr1 (102-162)||(1486710-1486770)
chr1 (116-172)||(23636040-23636096)
chr1 (114-162)||(25361896-25361944)
chr1 (107-167)||(52903252-52903312)
chr1 (112-167)||(14332638-14332693)
chr1 (112-151)||(15641042-15641081)
chr1 (104-155)||(25098563-25098614)
chr1 (103-162)||(25272481-25272540)
chr1 (104-167)||(39953142-39953205)
chr1 (105-160)||(42325561-42325616)
chr1 (112-162)||(9828052-9828102)
chr1 (112-161)||(10233261-10233310)
chr1 (104-185)||(19637768-19637849)
chr1 (100-157)||(24176373-24176430)
chr1 (104-161)||(26238115-26238171)
chr1 (122-167)||(30749858-30749903)
chr1 (122-167)||(30771309-30771354)
chr1 (104-156)||(398772-398824)
chr1 (99-155)||(17425101-17425157)
chr1 (113-173)||(18337338-18337398)
chr1 (114-154)||(19324572-19324612)
chr1 (112-164)||(19562620-19562672)
chr1 (108-184)||(22907318-22907394)
chr1 (112-167)||(25452146-25452199)
chr1 (107-163)||(27471566-27471622)
[»] chr3 (25 HSPs)
chr3 (97-167)||(7928443-7928513)
chr3 (104-184)||(25093502-25093582)
chr3 (114-177)||(8789536-8789599)
chr3 (98-173)||(11251972-11252045)
chr3 (99-155)||(16192758-16192814)
chr3 (104-156)||(32804547-32804599)
chr3 (98-176)||(3618875-3618951)
chr3 (104-167)||(8383257-8383320)
chr3 (112-167)||(20691327-20691382)
chr3 (104-162)||(26290371-26290429)
chr3 (97-162)||(7614416-7614481)
chr3 (105-162)||(8039836-8039893)
chr3 (98-167)||(51206349-51206418)
chr3 (112-192)||(45451561-45451641)
chr3 (107-167)||(49505150-49505210)
chr3 (105-168)||(4201397-4201460)
chr3 (104-167)||(8842330-8842392)
chr3 (104-159)||(10690266-10690321)
chr3 (104-163)||(13620764-13620823)
chr3 (102-157)||(34307786-34307841)
chr3 (97-155)||(11313808-11313866)
chr3 (112-162)||(18426957-18427007)
chr3 (104-185)||(40993313-40993395)
chr3 (98-162)||(1509533-1509597)
chr3 (109-157)||(11658820-11658868)
[»] scaffold0022 (1 HSPs)
scaffold0022 (105-193)||(90844-90932)
[»] scaffold0020 (1 HSPs)
scaffold0020 (99-162)||(135313-135376)
[»] chr4 (20 HSPs)
chr4 (104-163)||(5775358-5775417)
chr4 (104-154)||(22440609-22440659)
chr4 (99-222)||(23861371-23861495)
chr4 (114-163)||(18576037-18576086)
chr4 (113-173)||(9996849-9996909)
chr4 (106-153)||(903924-903971)
chr4 (104-167)||(8423714-8423777)
chr4 (105-163)||(6863154-6863212)
chr4 (112-162)||(15659761-15659811)
chr4 (104-158)||(40613450-40613504)
chr4 (104-163)||(11931280-11931339)
chr4 (105-160)||(16189710-16189765)
chr4 (112-167)||(33950144-33950199)
chr4 (112-155)||(36635332-36635375)
chr4 (112-167)||(54580019-54580074)
chr4 (112-162)||(4672086-4672136)
chr4 (105-151)||(30522927-30522973)
chr4 (102-162)||(21720508-21720568)
chr4 (112-184)||(28964227-28964299)
chr4 (106-162)||(30982879-30982935)
[»] scaffold0697 (1 HSPs)
scaffold0697 (104-193)||(1644-1733)
[»] scaffold0168 (1 HSPs)
scaffold0168 (102-159)||(21041-21098)
[»] scaffold0123 (1 HSPs)
scaffold0123 (102-159)||(44529-44586)
[»] scaffold1528 (1 HSPs)
scaffold1528 (99-161)||(1030-1092)
[»] scaffold0036 (1 HSPs)
scaffold0036 (112-162)||(9748-9798)
[»] scaffold0110 (1 HSPs)
scaffold0110 (104-161)||(28850-28907)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-145)||(192267-192308)
[»] scaffold0236 (1 HSPs)
scaffold0236 (103-162)||(25769-25828)
[»] scaffold0050 (1 HSPs)
scaffold0050 (104-167)||(70278-70341)
[»] scaffold0044 (1 HSPs)
scaffold0044 (113-160)||(53189-53236)
[»] scaffold0049 (1 HSPs)
scaffold0049 (105-167)||(63774-63836)


Alignment Details
Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 231 - 407
Target Start/End: Original strand, 4611674 - 4611850
Alignment:
Q  231 aaccgaaccaagttggccaaacacaatcttgccactaatttactattgatattgccagctaattgtgtgatggattggcagtaactacaagctagctagc 330  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  4611674 aaccgaactaagttggccaaacacaatcttgccactaatttactattgatattgccagctaattgtgtgatggcttggcagtaaccacaagctagctagc 4611773  T
Q  331 tagtgatcatcttcaagttggaagaataactcaaaattgcgtgaaatgtgatagcatcaagttgcaacgaatccaac 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4611774 tagtgatcatcttcaagttggaagaataactcaaaattgcgtgaaatgtgatagcatcaagttgcaacgaatccaac 4611850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 34897085 - 34897148
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| |||||||||||||||||||||| |||| |||||| ||||||||||| |||| ||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggaca 34897148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 4786397 - 4786339
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| |||||||||| |||||||||||| |||| |||||| ||||||||||||||||    
T  4786397 gacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtc 4786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 11803254 - 11803316
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||||||||| ||||||||||| |||||||||||| |||| |||||| ||||||||| |||||    
T  11803254 acactgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgt 11803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 11927145 - 11927087
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||| ||||||||||||| |||||||||| |||| |||||| ||||||||||||||||    
T  11927145 gacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtc 11927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 4611449 - 4611501
Alignment:
Q  21 caaagcaagccaaaacgtttggtttgggtctatgaaacacgaatacggacaga 73  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||| ||||||    
T  4611449 caaagcaagccaaaacgtttggtttgggtctttgaagcacggatacagacaga 4611501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 12606880 - 12606825
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||||||||||| || ||||  ||||| |||||||||||||||||||||    
T  12606880 taataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtcagaca 12606825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 13844647 - 13844592
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||||||| |||  |||||| |||||||||||||||| ||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggaca 13844592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 14134707 - 14134758
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||||||||||||||||||| |||| |||||| ||||| |||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtca 14134758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 31109577 - 31109514
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||||||||||||||||||| |  |||| || |||||||||||||| ||||| ||||    
T  31109577 gacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtcagtgtcggaca 31109514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 11944665 - 11944723
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||| ||||||||||||| |||||||||| | || |||||| ||||||||||||||||    
T  11944665 gacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtc 11944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 20679446 - 20679392
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagac 166  Q
    ||||||||||||||||||||||  ||| |||||| |||| |||||||||||||||    
T  20679446 taataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtcagac 20679392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 4611529 - 4611590
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    |||| ||||||| ||||||||||||||||| |||| |||| |||||| ||||||| ||||||    
T  4611529 acaccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtg 4611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 25566834 - 25566899
Alignment:
Q  97 agacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||| | ||||||||||| |||||||||| |||| |||||| || | |||||||||||    
T  25566834 agacactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 31556997 - 31557085
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||| ||||||||||||| |||||||||| |||| |||||| || | || |||||||||||||  |||||  |||||||||| ||||||    
T  31556997 gacacagttaataatttga-aaaatcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacacg 31557085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 33405437 - 33405380
Alignment:
Q  110 gttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||| ||||| |||  |||||| |||||||||||||||| ||||    
T  33405437 gttaataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggaca 33405380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 24362261 - 24362209
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    ||||||| ||||||||||||| |||||||| |||| |||||| ||||||||||    
T  24362261 gacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 24669431 - 24669491
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||||| |||| |||| |||| |||||| || | |||||||||||    
T  24669431 ctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtc 24669491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 31236628 - 31236580
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    |||||||||||||||||||||| ||||  ||||| ||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 39954338 - 39954282
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    ||||||| |||||||||||||||||||||| |||  |||||| |||||||| |||||    
T  39954338 gacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 3025559 - 3025614
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||||||| |||| |||||| |||| ||||| ||||| ||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggaca 3025614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 28385053 - 28384994
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    ||||||||||||||| |||  ||||| ||| |||| |||||| |||||||||||||||||    
T  28385053 gacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcggtgtca 28384994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 29447161 - 29447110
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||||||||||||||||||| ||||  |||||||| | ||||||||||||    
T  29447161 taataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtca 29447110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 33382077 - 33382019
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||| ||||||||| ||||||| |||| |||| | |||| |||||||||||||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtca 33382019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 7658471 - 7658520
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    ||||||||||||||||| |||| |||| |||||| ||||| |||||||||    
T  7658471 taataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 14731706 - 14731763
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    ||||| ||||| | |||||||||||||||||||||| |||  |||||| |||||||||    
T  14731706 gacacagacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 26714143 - 26714050
Alignment:
Q  104 gacaccgttaataatttgagaaaa-tcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacgtttaat 199  Q
    ||||||| ||||||| |||||||| |||||| | ||||||||| |||  ||||||||||| ||||  |||||||| |||||| || |||||||||||    
T  26714143 gacaccgctaataatgtgagaaaaatcacat-actcggtgtaattat--gtgtcggtgtcggacacgacacacatacgacactaaaacacgtttaat 26714050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 38079009 - 38079062
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||||||||||| |||||| |||||| |||| |||| ||||    
T  38079009 ataatttaagaaaatcacatgattcagtgtaattatatgcgtcgatgtcggaca 38079062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 41831999 - 41831946
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcg 157  Q
    ||||| ||||||||||||| |||||||||| |||| ||||||||| | ||||||    
T  41831999 gacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 41831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  103 tgacaccgttaataatttgagaaaatcacatgattcggtgt 143  Q
    |||||||| |||||||||||||||||||||| |||| ||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 26902216 - 26902176
Alignment:
Q  122 agaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||| |||| |||||| ||||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 26902176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 40332200 - 40332248
Alignment:
Q  113 aataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    ||||||||||||||||||||| |||| |||||| || | ||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 28588733 - 28588638
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacgtttaat 199  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |||| ||||||||||| ||||  ||||| ||| ||||||| |||||| |||||    
T  28588733 gacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaat 28588638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 6471954 - 6471890
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||| | |||||||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  6471954 gacactgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtc 6471890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 30502446 - 30502367
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacac 184  Q
    |||||| |||||||||||||||||||| | |||| |||||| |||||||||||||||| ||||  |||||  ||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacac 30502367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 30542789 - 30542710
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacac 184  Q
    |||||| |||||||||||||||||||| | |||| |||||| |||||||||||||||| ||||  |||||  ||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacac 30542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 3966503 - 3966561
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| |||||||||||||||||||||  |||| |||||| ||||||||||||||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 24273096 - 24273039
Alignment:
Q  97 agacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtg 154  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||||| ||||||||    
T  24273096 agacactgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 24389118 - 24389175
Alignment:
Q  97 agacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtg 154  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||||| ||||||||    
T  24389118 agacactgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 42893355 - 42893449
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    |||| ||||| | ||||||||||| |||||||||| || | |||||| || | |||||||||||||||| |||||   |||||||||| ||||||    
T  42893355 acaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacg 42893449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 36838544 - 36838601
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| ||||||||||||||||| |||| |||  |||||| ||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtc 36838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7175078 - 7175026
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    |||||||||||||||||||||||||||||| ||| ||  ||| ||||||||||    
T  7175078 gacaccgttaataatttgagaaaatcacataatttggcataattatatgtgtc 7175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 41091322 - 41091258
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||| ||||| | |||| ||||||||||||||||| |||| |||||| ||||||||||| ||||    
T  41091322 gacacggacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 41091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 12264887 - 12264836
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    |||||| |||| |||||||||||| ||||||||| |||||| ||||||||||    
T  12264887 acaccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtc 12264836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 16203846 - 16203791
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||| ||| |||  |||||| |||||||||||||||| ||||    
T  16203846 taataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggaca 16203791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 23016050 - 23015995
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcg 157  Q
    |||||| ||||||| ||||||||||||||||| |||| |||||| |||| ||||||    
T  23016050 ctgacatcgttaatcatttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 2436922 - 2436980
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| ||||||||||  |||||||||| ||||| ||| | ||||||||||||||||    
T  2436922 gacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtc 2436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 11685939 - 11685997
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| ||||||||||||||| || ||| |||  |||||| ||||||||||||||||    
T  11685939 gacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtc 11685997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 13287450 - 13287400
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||| |||||||||| |||| ||||||||| | |||||||||||    
T  13287450 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 13287400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 39205888 - 39205938
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||| ||||||    
T  39205888 taataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtc 39205938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 14873527 - 14873576
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||||||||||| ||||| |||  |||||| |||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtca 14873576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 18421890 - 18421837
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||||| || | |||||| |||||||||||| ||| ||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggaca 18421837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 21191107 - 21191046
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacac 173  Q
    ||||||||||| |||||||||| |||| |||||| || | ||||||||||| |||| |||||    
T  21191107 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacac 21191046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 9449477 - 9449521
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    |||||||||||||||||||||| ||||  ||||||||| ||||||    
T  9449477 taataatttgagaaaatcacataattcaatgtaactatttgtgtc 9449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 12927649 - 12927717
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||| |||| || ||||||||||||||||||| || |||  |||||| ||||| |||| ||||||||||    
T  12927649 acaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgtcagtgtcagaca 12927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 19746757 - 19746717
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattc 138  Q
    ||||||||||||| ||||||||||||||||| |||| ||||    
T  19746757 gacactgacaccgctaataatttgagaaaattacataattc 19746717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 26609348 - 26609408
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    |||| ||||||  ||||||||||| ||||||||||||||  ||| |||||| |||||||||    
T  26609348 acaccgacaccactaataatttgataaaatcacatgatttagtgcaactatttgtgtcggt 26609408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 27144463 - 27144515
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    ||||||| |||||||||||| ||||||||| |||  |||||| ||||||||||    
T  27144463 gacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 30098329 - 30098381
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    ||||||||||||||||||||||||||| ||||  ||||| ||||  |||||||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 32630796 - 32630736
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||| ||||||||||||||||| | || ||||  ||||| |||||||||| |||||    
T  32630796 ctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtc 32630736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 1433454 - 1433512
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  1433454 gacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtc 1433512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 20549786 - 20549870
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgaca 183  Q
    |||| ||||||| |||||||||||||||||||| | |||| |||||| |||||||||||||||| |||| ||||||  |||||||    
T  20549786 acaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgaca 20549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 2425790 - 2425736
Alignment:
Q  106 caccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    |||||||||||||||||||||||||||| |||  ||| |||||||||||||||||    
T  2425790 caccgttaataatttgagaaaatcacataattaagtggaactatatgtgtcggtg 2425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 22602769 - 22602711
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||| ||| ||||||||||||||||| |||| |||||| ||||||||||||||||    
T  22602769 gacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 5835255 - 5835310
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||| ||||||||||| |||| |||| |||||| |||||||||||||||||||||    
T  5835255 taatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtcagaca 5835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 28155570 - 28155633
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||||||||||| |||| ||||||||||| || | ||||||||||| ||||    
T  28155570 gacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggaca 28155633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 32287522 - 32287459
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||| |||||||||||||| |||| ||| || |||||||||||||||| ||||    
T  32287522 gacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcggaca 32287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 19206050 - 19206108
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| |||||||||||||||||||||| ||||  | ||| ||||||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 32308120 - 32308178
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| |||||||||||||||||||||| |||| |||||| | |||||||| |||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtc 32308178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 21880160 - 21880241
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||||||||||||||| |||| |||| |||||| || | ||||||||||| ||||  |||||  |||||||||| ||||||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacg 21880241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 9482944 - 9482992
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||  |||| |||||| ||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 9482992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 16341490 - 16341554
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||| ||||| | |||||||||||||||||||||| |||  |||||| |||||||| |||||||    
T  16341490 gacacggacactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtc 16341554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 27732299 - 27732243
Alignment:
Q  103 tgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    ||||| |||||||||||| ||||||| |||| |||| |||||| |||||||||||||    
T  27732299 tgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 3721101 - 3721156
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||||||| |||  || ||| |||||||||||||||| ||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggaca 3721156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 22484025 - 22484088
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||| |||||||  ||| |||| || ||| |||||||||||||||||||||    
T  22484025 gacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtcagaca 22484088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 23191896 - 23191959
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||||||||||||||||  ||| |||||| || |||| || ||||||||||    
T  23191896 gacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgtttcagtgtcagaca 23191959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 26733304 - 26733367
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||||| |||||||||| |||| || ||| || ||||||||||||| ||||    
T  26733304 gacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggaca 26733367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 27093472 - 27093409
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||| |||||||||||| |||  |||||| |||||| |||||||| |||||    
T  27093472 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagaca 27093409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 27184829 - 27184892
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||| |||||||||||| |||  |||||| |||||| |||||||| |||||    
T  27184829 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagaca 27184892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 37870901 - 37870956
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||| |||||||||||||||||||||  |||||| ||| |||||||||||| ||||    
T  37870901 taatcatttgagaaaatcacatgatttcgtgtaattatgtgtgtcggtgtcggaca 37870956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 3520403 - 3520345
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    ||||||||| |||| |||||||||||||| || ||||  ||||| ||||||||||||||    
T  3520403 ctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 5548676 - 5548734
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| | ||||||||||||||||| || |||| |||||| |||||||||| |||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtc 5548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 7328742 - 7328692
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||||||| |||| |||  |||||| ||||||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtc 7328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 17851434 - 17851488
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||| ||||||||| |||||||||||| |||| |||||| |||||||||| ||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 19992009 - 19992059
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||||||||||||  ||| |||||| |||| |||||||||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc 19992059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 22868050 - 22868112
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacaca 174  Q
    ||||||| |||||||||||||| |||| |||||| |||||||||| || ||| ||| ||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtgtcagtatcaaacacaacaca 22868112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 26329441 - 26329387
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcgg 158  Q
    |||| ||||||||||||||||||| ||||  |||| |||||| ||||||||||||    
T  26329441 gacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcgg 26329387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 8160410 - 8160467
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    ||||||||||||| ||||||||| ||||||| |||| |||  |||||| |||||||||    
T  8160410 gacactgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtgt 8160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 15902830 - 15902879
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    ||||||||||| |||||||||| |||  |||||| |||||||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 29787428 - 29787387
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaa 145  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaa 29787387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 42720950 - 42720881
Alignment:
Q  103 tgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaaca 172  Q
    |||||||| ||||||||||| |||||||||| |||   ||||| |||||||||| ||||| |||| ||||    
T  42720950 tgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtctgacacaaca 42720881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 640134 - 640174
Alignment:
Q  125 aaatcacatgattcggtgtaactatatgtgtcggtgtcaga 165  Q
    ||||||||| |||| |||||| |||||||||||||||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtcaga 640174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 11700801 - 11700837
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattc 138  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  11700801 ctgacaccgttaataatttgacaaaatcacataattc 11700837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 38134466 - 38134410
Alignment:
Q  103 tgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    |||||||| ||||||||||||||||| |||| ||||  |||||  ||||||||||||    
T  38134466 tgacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 38143230 - 38143286
Alignment:
Q  111 ttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||| |||||||||| |||   ||||| ||||||||| |||||||||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtcagaca 38143286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 7265651 - 7265571
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacacc 185  Q
    |||||| |||||||||||||||||||||| |||| |||||| |||||||||||||||| |||| || |||  |||||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacacc 7265571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 5732569 - 5732506
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||||||||||||||||||||||  ||  |||||| |||||||||||||||| ||||    
T  5732569 gacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggaca 5732506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 19040352 - 19040415
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |||||||||| ||||| ||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggaca 19040415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 7377979 - 7378096
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacgtttaatttga 203  Q
    ||||||| ||| |||||||||||||||||| ||||  ||||| |||||||||||||||| ||||  |||  |||||||||||  ||||||  |||| |||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctga 7378078  T
Q  204 aagagtgttcgtgcttcat 222  Q
     | ||||| ||||||||||    
T  7378079 ga-agtgtccgtgcttcat 7378096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 9025545 - 9025495
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 9027178 - 9027236
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| ||||||||||||| |||||||| |||| |||||| ||||||||||||||||    
T  9027178 gacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtc 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 5462680 - 5462733
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatat 151  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||| |||||    
T  5462680 gacactgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 13360420 - 13360363
Alignment:
Q  115 taatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaaca 172  Q
    ||||||||||||||||||| |||| |||||| ||||||| ||||||||||||| ||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgtttcggtgtcagacacaaca 13360363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 5000625 - 5000554
Alignment:
Q  153 tgtcggtgtcagacagaacacacatccgacaccaagacacgtttaatttgaaagagtgttcgtgcttcattga 225  Q
    |||||||||||||||  ||||| ||||||||||| ||||||| ||||  | ||||||||||||||||||||||    
T  5000625 tgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccg-aagagtgttcgtgcttcattga 5000554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 9617437 - 9617492
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||| |||||||||||||||||||||| ||||  ||||| ||||||||||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 9658879 - 9658942
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||| |||||||||||| |||| |||||| ||||| ||||||||| |||||    
T  9658879 gacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagaca 9658942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 11784267 - 11784216
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||||||||||||||||||||| || |||||| ||||| |||||||||||    
T  11784267 taataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtgtca 11784216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 31579283 - 31579223
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||| ||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaa--ttatgtgtcggtgtcggaca 31579223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 9629383 - 9629441
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||  ||||||||||||||||||||| ||||  ||||| ||||||||||||||||    
T  9629383 gacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9629441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 7086803 - 7086852
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||||||||||||||||||||| |||  |||||| |||||||||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 30866202 - 30866149
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcgg 158  Q
    |||||| |||||||||||||||||||||| ||||  ||||| ||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17341723 - 17341671
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    ||||||||||||||||||| |||||||||| |||| |||||| |||| |||||    
T  17341723 gacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 32320730 - 32320670
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||||||||||| |||||||||| ||||  ||| | ||||||| ||||||||    
T  32320730 ctgacaccgttaataatttgataaaatcacataattcaatgtcattatatgtatcggtgtc 32320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 32511727 - 32511667
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||| ||||||||| |||||||||||| |||| |||||| |||| |||| ||||||    
T  32511727 ctgacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtc 32511667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 13851736 - 13851799
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||||||||||| || | |||| |||||| ||||||||||| |||| ||||    
T  13851736 gacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 13851799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 19044472 - 19044523
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||||||||||| ||||||| |||| |||| | |||||||||||||||||    
T  19044472 taataatttgagaatatcacataattcagtgttattatatgtgtcggtgtca 19044523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 21924986 - 21924931
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||| |||| || |||| |||||| |||||||||||||||| ||||    
T  21924986 taataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggaca 21924931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 7996429 - 7996379
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||||||||| || |||| |||||| |||||| |||||||||    
T  7996429 taataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 7996379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 8022372 - 8022422
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||||||||| || |||| |||||| |||||| |||||||||    
T  8022372 taataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 8022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 9195805 - 9195755
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||||||| |||| |||  |||||| ||||||||||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtc 9195755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 20371169 - 20371111
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| |||||||||||||||||||||| | ||  ||| | ||||||||||||||||    
T  20371169 gacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtc 20371111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 26562701 - 26562747
Alignment:
Q  116 aatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||| |||| |||||| ||||||||||| ||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 26562747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 34073398 - 34073348
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||| ||| |||| |||||| |||||| |||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtc 34073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  116 aatttgagaaaatcacatgattcggtgtaactatatgtgtcg 157  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 14155305 - 14155240
Alignment:
Q  97 agacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||| | |||||||||||||||||||| || | |||| | || |||||| ||||||    
T  14155305 agacactgacaccgatcataatttgagaaaatcacataatacagtgtgattacatgtgttggtgtc 14155240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 28715289 - 28715358
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||| | ||||||||||| ||||| |||| |||| |||||| || | ||||||||||| ||||    
T  28715289 gacactgacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggaca 28715358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 16833316 - 16833396
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacac 192  Q
    ||||||||||| ||||||||||  ||| |||||| || | |||||||||| |||||  |||| | |||||||||| |||||    
T  16833316 taataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgttagacacgacacgcgtccgacaccaggacac 16833396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 17327700 - 17327656
Alignment:
Q  118 tttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||| |||  ||||||||||||||||| |||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtc 17327656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 44860314 - 44860378
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||| |||||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  44860314 gacactgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtc 44860378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 5367200 - 5367270
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgac 182  Q
    |||||||||||| ||||||||| |||| |||||| |||||||||||||||| ||||  ||||| |||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgac 5367270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 18276521 - 18276582
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcaga 165  Q
    ||||||| |||||||||||||||||||| | |||| |||||| ||| |||||||||||||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtcaga 18276582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 23718021 - 23718082
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    |||| ||||||| ||||||||||||||| |||||| |||| |||||| ||||||||||||||    
T  23718021 acaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 24105693 - 24105754
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    |||| ||||||| ||||||||||||||| |||||| |||| |||||| ||||||||||||||    
T  24105693 acaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 39279676 - 39279732
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||||||||||||| ||||||||||| || |||| |||||| |||||||||||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 21616762 - 21616813
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |||||||||    
T  21616762 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 31018591 - 31018653
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||| ||||||||| ||||||||||||||||  |||||| |||| ||||||||||| ||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcggaca 31018653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 37411303 - 37411245
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| |||||||||||||||||||||| |||| |||| | ||||||||||| ||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtc 37411245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 34691861 - 34691801
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||| ||||||||||| ||||||| || |||| |||||| |||||||||||||||| ||||    
T  34691861 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggaca 34691801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 34714273 - 34714213
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||| ||||||||||| ||||||| || |||| |||||| |||||||||||||||| ||||    
T  34714273 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggaca 34714213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 5473336 - 5473391
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||| |||||||||| |||||||||||   |||||||||||||| ||||    
T  5473336 taataatttgaaaaaatcacataattcggtgtaatattatgtgtcggtgtcggaca 5473391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 20242768 - 20242717
Alignment:
Q  122 agaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacac 173  Q
    |||||||||||| |||| |||||| |||||||||||||||| |||| |||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacac 20242717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 30404909 - 30404822
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagaca 191  Q
    ||||| ||||||||||||| |||||||||| |||| |||||| || | ||||||| ||| ||||  |||||  |||||||||| ||||    
T  30404909 gacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacaccaggaca 30404822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 30471046 - 30471093
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    ||||| |||||||||||||||| ||||| ||||| |||||||||||||    
T  30471046 taatattttgagaaaatcacataattcgatgtaattatatgtgtcggt 30471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 35449514 - 35449565
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    |||| |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  35449514 acactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 42832340 - 42832277
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||| ||||||| ||||||||||||||||| ||||  ||| |||||| |||| |||||||||||    
T  42832340 acaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 2331795 - 2331850
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||| ||||||||||||||||||||||| |||| |||||  | ||||||||||||||    
T  2331795 acaccattaataatttgagaaaatcacataattcagtgta--tttatgtgtcggtgtc 2331850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 18889642 - 18889592
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| ||||||||||||||| |||| ||||||  |||||||||||||||    
T  18889642 taataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 24975384 - 24975326
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| ||||||||||||||||||  || |||| |||||| |||||| |||||||||    
T  24975384 gacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtc 24975326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 25846749 - 25846787
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactata 150  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  25846749 taataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 28677909 - 28677966
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| ||||||||||| |||||||||| |||| |||||| ||||||| ||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt-tcggtgtc 28677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 30527653 - 30527599
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    |||| ||||||||||||||||||||| || |||  |||||| |||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 38355933 - 38355887
Alignment:
Q  117 atttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    ||||||||||||||||| |||| |||| | |||||||||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 38355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 2415325 - 2415406
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||||||||||||||| | || |||  |||||||||||||||| ||||| |||||  || ||  ||||||||| |||||||    
T  2415325 taataatttgagaaaattatataattaagtgtaactatatgtgttggtgtgagacacgactcatgtccgacaccgagacacg 2415406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 18570973 - 18571061
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    |||||| ||||||||||||||||| |||| ||||  |||||  ||||||||| |||||  |||  | ||| ||||||||||| ||||||    
T  18570973 acaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacaccaggacacg 18571061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 22084890 - 22084850
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaa 145  Q
    |||||||||||||||||||||||||| || |||| ||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaa 22084850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 28412351 - 28412391
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaa 145  Q
    |||||||||||||||||| |||||||||| |||| ||||||    
T  28412351 acaccgttaataatttgataaaatcacataattcagtgtaa 28412391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 2896180 - 2896117
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| |||||||||||||||||||||| |||| ||||| |||||| |||||||||||||||    
T  2896180 gacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagaca 2896117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 1864944 - 1864882
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||| ||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  1864944 acaccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 9709821 - 9709883
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggaca 9709883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 43492542 - 43492472
Alignment:
Q  115 taatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacacc 185  Q
    ||||||||||||||||| | ||||||||||| ||| ||||||||||||||||| ||||||  |||||||||    
T  43492542 taatttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacacc 43492472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 34371708 - 34371771
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||||| |||||||| ||||||||||||| |||| |||||| ||||||||||||||||    
T  34371708 gacactgacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtc 34371771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 36878461 - 36878524
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |||| ||||||||||| ||||    
T  36878461 gacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgaca 36878524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 40181865 - 40181940
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacac 173  Q
    ||||| ||||| | |||||||||||||||||||||| |||| |||||| ||||||| |||||||| |||| |||||    
T  40181865 gacacagacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacac 40181940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 10572640 - 10572591
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  10572640 taataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgt 10572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 21530689 - 21530778
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||||||||||||||||||||||||| || ||| ||| ||| |||| ||||||||||| ||||  |||||  |||||||| | ||||||    
T  21530689 gacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 29229455 - 29229520
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggt-gtaactatatgtgtcggtgtc 162  Q
    ||||||||||| | ||||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  29229455 gacactgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtgtcggtgtc 29229520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 5898334 - 5898262
Alignment:
Q  95 tgagacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||| | ||||||| ||||||| ||| |||||||||| |||| |||||| |||||| ||||||||||||||    
T  5898334 tgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagaca 5898262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 44482240 - 44482288
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 44482288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 2784556 - 2784619
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||| ||||| |||||||||||| |||  || ||| |||||||||||||||||||||    
T  2784556 gacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtgtcggtgtcagaca 2784619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 38503315 - 38503378
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||| ||||||| ||||||||||||||||||| ||  ||| |||||| ||||||||||||||||    
T  38503315 acaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 40258998 - 40258903
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||| |||||  |||||||||||| |||||||||| |||| |||||| || | ||||||||||||||||  ||||   |||||||||| ||||||    
T  40258998 gacaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacg 40258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 7918262 - 7918212
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||||| |||| |||||| |||||||||| |||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtc 7918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 17754306 - 17754368
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||| ||||||| ||||||||||| ||||| |||| |||| ||||||||||||||||| ||||    
T  17754306 acaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgt 17754368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 20157409 - 20157351
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| ||||||| |||||||||||||| |||| ||||||  |||||||||||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 20157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 28674801 - 28674863
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||||||||| |||| |||| || ||| ||||| ||| |||||||||||    
T  28674801 acaccgttaataatttgagaaaattacataattcagtataattatatatgttggtgtcagaca 28674863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 6427351 - 6427408
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| |||||||||||||||||||||| ||||  ||||| ||||||||| ||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtc 6427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 13997883 - 13997940
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||||||||||| |||| | |||||||||| |||| |||||| |||||||||||||||    
T  13997883 gacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 17831590 - 17831537
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcg 157  Q
    ||||||| |||||||||||||||||||||| |||| ||||||  ||||||||||    
T  17831590 gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 22515938 - 22515857
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||||||||| |||||||||| |||  |||||| || | ||||||||||| ||||  ||||| |||||||||| |||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacg 22515857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 1486770 - 1486710
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||| | ||||||||||| |||||||||| |||| |||||| |||| |||||||||||    
T  1486770 ctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 1486710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 23636096 - 23636040
Alignment:
Q  116 aatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaaca 172  Q
    ||||||||||||| |||| |||| |||||| | ||||||||||||||||||| ||||    
T  23636096 aatttgagaaaattacataattcagtgtaattgtatgtgtcggtgtcagacacaaca 23636040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 25361896 - 25361944
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||| |||| |||||| |||||||||| |||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtc 25361944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 52903252 - 52903312
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||| | ||||||| || |||| |||||| |||||||||||||||| ||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggaca 52903312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 14332693 - 14332638
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||||||| |||  |||||| ||||||| |||||||| ||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggaca 14332638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 15641081 - 15641042
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatat 151  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  15641081 taataatttaagaaaatcacatgattcagtgtaactatat 15641042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 25098614 - 25098563
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    ||||||| | |||||||||||||||||||| |||| |||||| |||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 25272481 - 25272540
Alignment:
Q  103 tgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| ||||| |||||||||||||||||| |||  |||||| |||| |||||||||||    
T  25272481 tgacacagttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgtc 25272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 39953205 - 39953142
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||| |||||||||||| |||  |||||| | |||||||||||||| ||||    
T  39953205 gacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggaca 39953142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 42325561 - 42325616
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    |||||| ||||||||||||||||| |||| |||| ||||||| |||||||| ||||    
T  42325561 acaccgataataatttgagaaaatgacataattcagtgtaacaatatgtgttggtg 42325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 9828052 - 9828102
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||| |||||||||| |||| |||||| | ||||||||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtc 9828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 10233261 - 10233310
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||||| ||||||||||||||| |||| |||||| |||||||||| ||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 19637768 - 19637849
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacacc 185  Q
    ||||||| ||||||||| ||||||| |||| ||||  |||||  ||||||||||||||| ||||  | ||| ||||||||||    
T  19637768 gacaccgataataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacacgatacatatccgacacc 19637849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 24176430 - 24176373
Alignment:
Q  100 cactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcg 157  Q
    |||| |||||| ||||||||||||||||| |||| |||| |||||| |||| ||||||    
T  24176430 cactaacaccgataataatttgagaaaataacatcattcagtgtaattataggtgtcg 24176373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 26238171 - 26238115
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    ||||||| ||||||||||||||||| |||| |||| |||||| |||||||||| ||||    
T  26238171 gacaccgctaataatttgagaaaataacataattcagtgtaa-tatatgtgtcagtgt 26238115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 30749858 - 30749903
Alignment:
Q  122 agaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||| |||| |||||| |||||||||||||||| ||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggaca 30749903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 30771309 - 30771354
Alignment:
Q  122 agaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||| |||| |||||| |||||||||||||||| ||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggaca 30771354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 398824 - 398772
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    ||||||| ||||||||||| |||||||||| |||| |||||| |||| |||||    
T  398824 gacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 17425157 - 17425101
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    |||| ||||||| ||||||||||| |||||||||| ||||  ||||| |||||||||    
T  17425157 acacggacaccgataataatttgataaaatcacataattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 18337338 - 18337398
Alignment:
Q  113 aataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacac 173  Q
    |||||||||| |||||||||| |||| |||||| || | ||||||||||| |||| |||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacac 18337398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtg 154  Q
    |||||||||||||||||||| |||| |||||| ||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 19562672 - 19562620
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcag 164  Q
    |||||||||||||||||| |||  ||| |||||| ||||||||| ||||||||    
T  19562672 taataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtcag 19562620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 22907394 - 22907318
Alignment:
Q  108 ccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacac 184  Q
    ||||||||||||||||||||| | || ||| ||| ||| |||| ||||||||||  |||| ||||||  ||||||||    
T  22907394 ccgttaataatttgagaaaattatataatttggtataattataagtgtcggtgtgggacacaacacatgtccgacac 22907318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 25452199 - 25452146
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||| ||| |||| ||||||   |||||||||||||||||||    
T  25452199 taataatttgagaaaatctcataattcagtgtaa--ttatgtgtcggtgtcagaca 25452146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 27471622 - 27471566
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||| |||||||||||||||| ||||| |||| |||||| || |||||| |||||||    
T  27471622 accgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtca 27471566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 7928443 - 7928513
Alignment:
Q  97 agacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||| ||||||| ||||||||||| |||||||||| |||| |||||| |||||||||||||||| ||||    
T  7928443 agacaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggaca 7928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 25093502 - 25093582
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacac 184  Q
    ||||| |||||| ||||||||||||||||  |||| |||||| |||||||||||||||| |||| ||||||  ||||||||    
T  25093502 gacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacac 25093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 8789599 - 8789536
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacat 177  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||| ||||  ||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacat 8789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 11251972 - 11252045
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacac 173  Q
    ||||||||||  | |||||||||||||||||||||| |||| ||||||   ||||||||||||||||||| |||||    
T  11251972 gacactgacattgctaataatttgagaaaatcacataattcagtgtaa--ttatgtgtcggtgtcagacacaacac 11252045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 16192814 - 16192758
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    |||| ||||||||||||||||||||||||| |||| |||| |||||| |||||||||    
T  16192814 acaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 32804599 - 32804547
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtc 156  Q
    |||||||||||||||||||||||||||||| |||  |||||| ||||||||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 3618875 - 3618951
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacaca 176  Q
    ||||||||||||| |||||||||||||||||  ||| |||| | ||||   ||||||||||||||||||| ||||||||    
T  3618875 gacactgacaccgctaataatttgagaaaattccataattcagcgtaa--ttatgtgtcggtgtcagacacaacacaca 3618951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 8383257 - 8383320
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| ||||||||||||||||||| || |||| |||||| |||| ||||||||||| ||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggaca 8383320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 20691327 - 20691382
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||||||||| |||| |||| ||||||  ||||||||||||||||||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagaca 20691382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 26290371 - 26290429
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| |||||||||||||||||||||||  |||||| ||| |||||||||| |||||    
T  26290371 gacaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtc 26290429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 7614481 - 7614416
Alignment:
Q  97 agacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| ||||| ||||||||||| |||||||||||| |||| || ||| ||||| ||||||||||    
T  7614481 agacaccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtgtc 7614416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 8039893 - 8039836
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| ||||||||||||||||| | || |||| |||||| ||||||||||||||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtc 8039836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 51206418 - 51206349
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||| | ||||||||||| |||||||||| |||| |||||| || | ||||||||||| ||||    
T  51206418 gacactgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggaca 51206349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 45451561 - 45451641
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacac 192  Q
    ||||||||||||||||||||||  ||| || |||  ||||||||||||||| ||||  |||||  ||||||||| ||||||    
T  45451561 taataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacaccgagacac 45451641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 49505210 - 49505150
Alignment:
Q  107 accgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||| |||||||||||||||||||||| |||  |||||| |||||||||| ||||| ||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggaca 49505150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 4201397 - 4201460
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacag 168  Q
    |||||||||||||||||| |||||||||| |||  |||||| ||||| ||| |||||| |||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtccgacag 4201460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 8842330 - 8842392
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| |||||||||  ||||||||||| ||| ||||||| ||||| |||||||||||||||    
T  8842330 gacaccgctaataatttt-gaaaatcacataatttggtgtaattatatatgtcggtgtcagaca 8842392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 10690321 - 10690266
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    ||||||| ||||||| |||||||||||||| |||| |||||| ||||| |||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 13620823 - 13620764
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    ||||||| || |||||||||||||||||||||||| ||| |  |||||||||| ||||||    
T  13620823 gacaccgctagtaatttgagaaaatcacatgattcagtgcagttatatgtgtctgtgtca 13620764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 34307841 - 34307786
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcg 157  Q
    ||||||||| ||||||||||||||||||||||  ||| |||||| |||| ||||||    
T  34307841 ctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 11313866 - 11313808
Alignment:
Q  97 agacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    |||||| ||||| | |||||||||||||||||||||| |||  |||||| |||||||||    
T  11313866 agacaccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 18426957 - 18427007
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||| | |||||||||| ||||||||||| ||||| ||||||||||    
T  18426957 taataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtc 18427007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 40993395 - 40993313
Alignment:
Q  104 gacaccgttaataatttgagaaaa-tcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacacc 185  Q
    ||||||| ||||||||| | |||| |||||| |||| |||||| |||||||||||||||| ||||  |||||  |||||||||    
T  40993395 gacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacacc 40993313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 1509533 - 1509597
Alignment:
Q  98 gacactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||||||||| | ||||||||||| |||||||||| |||  |||||| || | |||||||||||    
T  1509533 gacactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 1509597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 11658820 - 11658868
Alignment:
Q  109 cgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcg 157  Q
    ||||||||||||||||||||| ||| |||| |||| | |||||||||||    
T  11658820 cgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcg 11658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 90844 - 90932
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||| |||||||||||||||||||| || |||| |||||| ||||| ||||| ||||||||| |||||   ||||||||||| |||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacaccaaaacacg 90932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 135376 - 135313
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||| ||||| | |||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  135376 acaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 5775417 - 5775358
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||| ||||||||||||||||||||||| |||  |||||| |||||||||||||||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtca 5775358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 22440659 - 22440609
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtg 154  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  22440659 gacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 222
Target Start/End: Complemental strand, 23861495 - 23861371
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaa--ctatatgtgtcggtgtcagacagaacacacatccgacaccaagacacgttt 196  Q
    |||| ||||||| |||||| |||| |||||||||||||||  |||||   ||||||||||||||||||| |  |||||  || | ||||||||||||  |    
T  23861495 acaccgacaccgctaataaattgataaaatcacatgattcaatgtaattatatatgtgtcggtgtcagatacgacacatgtctgtcaccaagacacgcct 23861396  T
Q  197 aatttgaaagagtgttcgtgcttcat 222  Q
    || || ||||||||||||||||||||    
T  23861395 aa-ttcaaagagtgttcgtgcttcat 23861371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 18576086 - 18576037
Alignment:
Q  114 ataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtgttggtgtca 18576037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 9996849 - 9996909
Alignment:
Q  113 aataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacac 173  Q
    ||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||| |||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgtctcggtgtcagacataacac 9996909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 903924 - 903971
Alignment:
Q  106 caccgttaataatttgagaaaatcacatgattcggtgtaactatatgt 153  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 8423777 - 8423714
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||| |||||||||||||||||||||| |||| |||||| ||||  |||||||||| ||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggaca 8423714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 6863154 - 6863212
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    |||||||||||||||||| ||||||| || |||||||| || ||||||| |||||||||    
T  6863154 acaccgttaataatttgaaaaaatcatataattcggtgcaattatatgtatcggtgtca 6863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 15659811 - 15659761
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  15659811 taataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtc 15659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 40613450 - 40613504
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcgg 158  Q
    ||||||| ||||| |||||||||||||||| |||| |||||| ||||||||||||    
T  40613450 gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 11931280 - 11931339
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtca 163  Q
    ||||||||||||||| ||| |||||||||| |||  |||||| ||||||||||| |||||    
T  11931280 gacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtca 11931339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 16189710 - 16189765
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    |||||| ||| |||||||||||||||||| |||| |||||| ||| ||||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 33950144 - 33950199
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||||||||||||||||||| |||   |||||  ||||||||||||||||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagaca 33950199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 36635332 - 36635375
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgt 155  Q
    |||||||||||||||||||||| |||| |||||| |||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 54580074 - 54580019
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||||||||| |||||||||| |||| |||||| |||| ||||||||||| ||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggaca 54580019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 4672136 - 4672086
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||| |||||| |||| |||| ||||| |||||||||||||||||    
T  4672136 taataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtc 4672086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 30522973 - 30522927
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatat 151  Q
    |||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaactatat 30522927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 21720568 - 21720508
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||| |||||||||||| ||||||| || |||   ||||||||||| ||||||||||    
T  21720568 ctgacacccttaataatttgataaaatcatataatttaatgtaactatatatgtcggtgtc 21720508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 28964299 - 28964227
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacac 184  Q
    ||||||||||| |||||||||| |||| |||||| || | ||||| ||||| ||||  ||||| |||||||||    
T  28964299 taataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacac 28964227  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 30982935 - 30982879
Alignment:
Q  106 caccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    ||||| |||| |||||||||||||||||  ||| |||||| |||| |||||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc 30982879  T

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Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 1644 - 1733
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagacagaacacacatccgacaccaagacacg 193  Q
    ||||||||||||||||||||||||||| || ||| ||| ||| |||| ||||||||||| ||||  |||||  |||||||| | ||||||    
T  1644 gacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 21041 - 21098
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    ||||||| |||||||||||||||||||||||| | ||||| ||| |||||||||||||    
T  21041 ctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggt 21098  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 44586 - 44529
Alignment:
Q  102 ctgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggt 159  Q
    ||||||||| ||| |||||||||||||||||| |||| |||||| |||||||||||||    
T  44586 ctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

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Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 1030 - 1092
Alignment:
Q  99 acactgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    |||| ||||||| ||||||||||| ||||| |||| |||| ||||||||||||||||| ||||    
T  1030 acaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgt 1092  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 9798 - 9748
Alignment:
Q  112 taataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||||||||||||||||| | |||| |||||| ||||||||||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtc 9748  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 28850 - 28907
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgt 161  Q
    ||||||||||||||||| |||||||| ||| ||||  ||||| |||||||||||||||    
T  28850 gacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgt 28907  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 192308 - 192267
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaa 145  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  192308 gacaccgttaataatttgagaaaattacataattcggtgtaa 192267  T

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Target: scaffold0236 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 25828 - 25769
Alignment:
Q  103 tgacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtc 162  Q
    |||||| |||||||||| ||||||||||||| |||  |||||| |||| |||||||||||    
T  25828 tgacacggttaataattagagaaaatcacataatttagtgtaattataagtgtcggtgtc 25769  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 70278 - 70341
Alignment:
Q  104 gacaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    ||||| ||||||||||||| ||||| |||| |||| |||||| |||| ||||||||||| ||||    
T  70278 gacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggaca 70341  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 53189 - 53236
Alignment:
Q  113 aataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtg 160  Q
    ||||||||||||||||||||| |||| |||||| |||| |||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 63774 - 63836
Alignment:
Q  105 acaccgttaataatttgagaaaatcacatgattcggtgtaactatatgtgtcggtgtcagaca 167  Q
    |||||| ||||||||||||||||| |||| |||| ||| || || | ||||||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtcagaca 63836  T

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