View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18466_low_28 (Length: 209)
Name: NF18466_low_28
Description: NF18466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18466_low_28 |
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Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 34354054 - 34354230
Alignment:
| Q |
18 |
aaagatacataagagttagatttttcatttggccattgtgatcttggatatagaacgattcttaaggggtaagtggtggattatcaagaggtggaagcaa |
117 |
Q |
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| T |
34354054 |
aaagatacacaagagttagatttttcatttggccattgtgatcttggatatagaacgattcttaaggggtatgtggtggattatcaagacgtggaagcaa |
34354153 |
T |
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| Q |
118 |
aagataaaatcagtgtttttggttcattttaagaaaggctaaagcctcattttgaagtattttttattggtgttctt |
194 |
Q |
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| T |
34354154 |
aagataaaatcagtgtttttggttcattttaagaaaggctaaagcctcattttgaagtattttttattggtgttctt |
34354230 |
T |
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