View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18467_low_22 (Length: 418)

Name: NF18467_low_22
Description: NF18467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18467_low_22
NF18467_low_22
[»] chr5 (38 HSPs)
chr5 (142-217)||(29695012-29695087)
chr5 (155-225)||(23118053-23118123)
chr5 (143-220)||(8544979-8545056)
chr5 (144-217)||(11637563-11637636)
chr5 (147-208)||(37073762-37073823)
chr5 (144-215)||(39914900-39914970)
chr5 (143-217)||(40715939-40716013)
chr5 (144-217)||(5107236-5107309)
chr5 (151-208)||(41630110-41630167)
chr5 (337-401)||(4084877-4084941)
chr5 (337-401)||(18617437-18617501)
chr5 (144-215)||(26409252-26409323)
chr5 (358-396)||(1554078-1554116)
chr5 (343-401)||(10554550-10554608)
chr5 (142-220)||(17672289-17672367)
chr5 (336-402)||(19360465-19360531)
chr5 (143-209)||(20125032-20125096)
chr5 (358-392)||(22799759-22799793)
chr5 (142-192)||(26655486-26655536)
chr5 (142-192)||(26927071-26927121)
chr5 (360-402)||(31082733-31082775)
chr5 (171-216)||(8682412-8682457)
chr5 (336-393)||(17071220-17071277)
chr5 (336-393)||(19128766-19128823)
chr5 (144-217)||(32200438-32200511)
chr5 (143-204)||(37054259-37054320)
chr5 (167-220)||(39610355-39610408)
chr5 (143-220)||(40027754-40027831)
chr5 (143-204)||(41266396-41266457)
chr5 (143-195)||(3052298-3052350)
chr5 (154-222)||(5485178-5485246)
chr5 (341-401)||(6476781-6476841)
chr5 (180-220)||(11318223-11318263)
chr5 (143-215)||(11647196-11647268)
chr5 (142-214)||(11720894-11720965)
chr5 (143-219)||(13864339-13864415)
chr5 (151-191)||(20074575-20074615)
chr5 (336-396)||(27364482-27364542)
[»] chr7 (34 HSPs)
chr7 (142-217)||(35142138-35142213)
chr7 (143-217)||(7388029-7388103)
chr7 (143-214)||(21105603-21105674)
chr7 (337-395)||(25343236-25343294)
chr7 (142-192)||(42227794-42227844)
chr7 (171-219)||(21580811-21580859)
chr7 (142-214)||(23221392-23221464)
chr7 (338-401)||(7668480-7668543)
chr7 (336-387)||(15305245-15305296)
chr7 (171-214)||(26713112-26713154)
chr7 (142-209)||(40187625-40187692)
chr7 (358-396)||(1417626-1417664)
chr7 (142-220)||(7994873-7994951)
chr7 (142-192)||(27833390-27833440)
chr7 (358-396)||(38225971-38226009)
chr7 (154-216)||(39926539-39926601)
chr7 (142-208)||(45425459-45425525)
chr7 (143-209)||(48837872-48837938)
chr7 (143-220)||(429168-429245)
chr7 (147-192)||(7908615-7908660)
chr7 (168-209)||(8903657-8903698)
chr7 (143-220)||(24099226-24099302)
chr7 (143-216)||(28200375-28200448)
chr7 (143-192)||(30397091-30397140)
chr7 (143-220)||(32315217-32315294)
chr7 (337-398)||(40273557-40273618)
chr7 (181-217)||(8901368-8901404)
chr7 (143-199)||(18773746-18773802)
chr7 (153-201)||(21411532-21411579)
chr7 (145-217)||(24225973-24226045)
chr7 (177-217)||(26825421-26825461)
chr7 (159-215)||(34000261-34000317)
chr7 (177-217)||(42829258-42829298)
chr7 (149-221)||(44651598-44651670)
[»] chr3 (25 HSPs)
chr3 (143-217)||(7464481-7464555)
chr3 (142-215)||(7651185-7651258)
chr3 (143-220)||(47039421-47039498)
chr3 (143-199)||(48657807-48657863)
chr3 (167-215)||(22462311-22462359)
chr3 (337-401)||(46150720-46150784)
chr3 (143-217)||(7827505-7827579)
chr3 (143-217)||(7829893-7829967)
chr3 (166-208)||(25485481-25485523)
chr3 (142-204)||(48209200-48209262)
chr3 (336-402)||(48648200-48648266)
chr3 (142-196)||(52453246-52453300)
chr3 (336-397)||(13477054-13477115)
chr3 (336-393)||(27082773-27082830)
chr3 (144-217)||(34899094-34899167)
chr3 (152-217)||(46226077-46226141)
chr3 (336-393)||(48764474-48764531)
chr3 (144-209)||(52119381-52119446)
chr3 (177-209)||(9251421-9251453)
chr3 (143-215)||(10922298-10922370)
chr3 (177-217)||(32753825-32753865)
chr3 (142-214)||(38130948-38131020)
chr3 (177-209)||(43679811-43679843)
chr3 (341-393)||(48507031-48507083)
chr3 (337-401)||(55373697-55373761)
[»] chr2 (40 HSPs)
chr2 (143-219)||(31815877-31815953)
chr2 (177-220)||(1238156-1238199)
chr2 (142-214)||(31397778-31397850)
chr2 (142-209)||(5168568-5168635)
chr2 (142-209)||(9547398-9547465)
chr2 (336-402)||(9540328-9540394)
chr2 (143-192)||(4238781-4238830)
chr2 (159-220)||(9519720-9519781)
chr2 (147-216)||(40967365-40967434)
chr2 (143-219)||(20565065-20565141)
chr2 (142-214)||(29544627-29544699)
chr2 (336-395)||(9276326-9276385)
chr2 (143-190)||(24581007-24581054)
chr2 (142-209)||(25395431-25395498)
chr2 (152-215)||(28202296-28202359)
chr2 (143-214)||(36264469-36264540)
chr2 (336-395)||(38361064-38361123)
chr2 (337-395)||(1296377-1296435)
chr2 (143-217)||(2256968-2257042)
chr2 (143-217)||(14735883-14735957)
chr2 (177-215)||(20239342-20239380)
chr2 (143-217)||(20455888-20455962)
chr2 (358-396)||(22301865-22301903)
chr2 (143-217)||(27412826-27412900)
chr2 (143-217)||(29798507-29798581)
chr2 (143-209)||(29809331-29809397)
chr2 (143-217)||(31837926-31838000)
chr2 (177-219)||(34242817-34242859)
chr2 (151-217)||(40295456-40295522)
chr2 (159-217)||(44026605-44026663)
chr2 (336-393)||(18174668-18174725)
chr2 (143-208)||(27935062-27935127)
chr2 (143-220)||(30045447-30045524)
chr2 (143-220)||(30050610-30050687)
chr2 (143-220)||(30141654-30141731)
chr2 (154-215)||(37320518-37320579)
chr2 (143-208)||(39555426-39555490)
chr2 (180-220)||(7302168-7302208)
chr2 (337-393)||(22560566-22560622)
chr2 (177-217)||(27244654-27244694)
[»] chr4 (35 HSPs)
chr4 (143-214)||(19908692-19908763)
chr4 (148-192)||(36479013-36479057)
chr4 (143-209)||(37930837-37930903)
chr4 (159-217)||(39842018-39842076)
chr4 (143-217)||(42344608-42344682)
chr4 (342-395)||(1866346-1866399)
chr4 (154-219)||(6459925-6459990)
chr4 (177-217)||(13276126-13276166)
chr4 (152-208)||(41536928-41536984)
chr4 (149-217)||(51436602-51436670)
chr4 (177-217)||(56309324-56309364)
chr4 (157-220)||(874453-874516)
chr4 (146-217)||(14202472-14202543)
chr4 (177-220)||(17134119-17134162)
chr4 (143-214)||(30135140-30135211)
chr4 (143-190)||(34960147-34960194)
chr4 (146-217)||(35021460-35021531)
chr4 (142-217)||(43034331-43034406)
chr4 (143-217)||(24664981-24665055)
chr4 (177-215)||(29910460-29910498)
chr4 (143-209)||(48171886-48171952)
chr4 (159-209)||(56096209-56096259)
chr4 (143-216)||(35823374-35823446)
chr4 (144-209)||(41520959-41521024)
chr4 (143-204)||(46434750-46434811)
chr4 (171-216)||(49952587-49952632)
chr4 (143-220)||(54500563-54500640)
chr4 (143-200)||(54677239-54677296)
chr4 (151-215)||(7371546-7371610)
chr4 (142-222)||(9946419-9946499)
chr4 (177-217)||(12712042-12712082)
chr4 (171-219)||(14197449-14197497)
chr4 (152-192)||(29568608-29568648)
chr4 (152-208)||(34595935-34595991)
chr4 (341-393)||(56262480-56262532)
[»] chr1 (35 HSPs)
chr1 (143-214)||(33153870-33153941)
chr1 (146-217)||(37705122-37705193)
chr1 (143-215)||(10292935-10293007)
chr1 (146-217)||(2613719-2613790)
chr1 (142-217)||(27533240-27533315)
chr1 (142-220)||(3777712-3777790)
chr1 (145-199)||(13401612-13401666)
chr1 (143-220)||(14768800-14768878)
chr1 (143-209)||(41973260-41973326)
chr1 (144-217)||(3431327-3431400)
chr1 (143-208)||(22388165-22388230)
chr1 (177-217)||(2884472-2884512)
chr1 (149-209)||(18056712-18056772)
chr1 (145-216)||(12212293-12212364)
chr1 (142-217)||(17139506-17139581)
chr1 (166-217)||(30678826-30678877)
chr1 (337-392)||(50271783-50271838)
chr1 (142-220)||(21041338-21041416)
chr1 (178-208)||(28341187-28341217)
chr1 (143-209)||(29042542-29042608)
chr1 (336-402)||(37853125-37853191)
chr1 (358-403)||(4134046-4134091)
chr1 (143-220)||(15382809-15382886)
chr1 (143-216)||(16967184-16967257)
chr1 (143-204)||(17917128-17917189)
chr1 (180-217)||(18091200-18091237)
chr1 (337-393)||(13263515-13263571)
chr1 (177-217)||(16033474-16033514)
chr1 (177-217)||(18521244-18521284)
chr1 (337-393)||(25469085-25469141)
chr1 (143-215)||(32433085-32433157)
chr1 (142-214)||(36467014-36467086)
chr1 (143-199)||(41974776-41974832)
chr1 (142-226)||(49130217-49130300)
chr1 (177-217)||(49222813-49222853)
[»] chr8 (26 HSPs)
chr8 (144-217)||(21557430-21557503)
chr8 (144-214)||(23159441-23159511)
chr8 (144-217)||(11708983-11709056)
chr8 (142-222)||(6471503-6471583)
chr8 (143-219)||(12938917-12938993)
chr8 (168-216)||(13272537-13272585)
chr8 (153-209)||(18959154-18959210)
chr8 (143-215)||(34420852-34420924)
chr8 (165-216)||(3456833-3456884)
chr8 (142-217)||(13357430-13357505)
chr8 (143-217)||(9241012-9241086)
chr8 (153-215)||(16843523-16843585)
chr8 (335-393)||(26654376-26654434)
chr8 (142-216)||(30071505-30071579)
chr8 (336-401)||(3417354-3417419)
chr8 (143-216)||(3650518-3650591)
chr8 (152-217)||(10732774-10732839)
chr8 (143-220)||(12133527-12133604)
chr8 (143-220)||(18422443-18422520)
chr8 (144-209)||(26799189-26799254)
chr8 (336-388)||(3165125-3165177)
chr8 (177-217)||(8837917-8837957)
chr8 (149-209)||(24429804-24429864)
chr8 (337-393)||(31641509-31641565)
chr8 (336-400)||(41974637-41974701)
chr8 (143-191)||(44632175-44632223)
[»] chr6 (21 HSPs)
chr6 (143-216)||(8629686-8629759)
chr6 (143-204)||(24623307-24623368)
chr6 (142-217)||(5632131-5632206)
chr6 (144-219)||(32524411-32524486)
chr6 (143-216)||(4826288-4826361)
chr6 (142-219)||(10278448-10278525)
chr6 (143-204)||(12232172-12232233)
chr6 (152-216)||(404161-404225)
chr6 (168-220)||(28758815-28758867)
chr6 (177-216)||(2426719-2426758)
chr6 (142-209)||(2445304-2445371)
chr6 (177-220)||(4553730-4553773)
chr6 (143-190)||(15169955-15170002)
chr6 (143-190)||(15178727-15178774)
chr6 (154-217)||(19277571-19277634)
chr6 (143-217)||(788863-788937)
chr6 (146-216)||(29069481-29069551)
chr6 (143-208)||(8569715-8569780)
chr6 (144-217)||(16390426-16390499)
chr6 (168-209)||(24212554-24212595)
chr6 (338-390)||(19311828-19311880)
[»] scaffold0204 (1 HSPs)
scaffold0204 (156-214)||(16151-16209)
[»] scaffold0021 (1 HSPs)
scaffold0021 (142-214)||(161141-161213)
[»] scaffold0008 (1 HSPs)
scaffold0008 (144-217)||(119566-119639)
[»] scaffold1160 (1 HSPs)
scaffold1160 (143-208)||(1702-1767)
[»] scaffold0017 (1 HSPs)
scaffold0017 (171-220)||(35946-35995)
[»] scaffold0016 (1 HSPs)
scaffold0016 (177-217)||(99034-99074)


Alignment Details
Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 29695087 - 29695012
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  29695087 ggtggtggtcggggtttgaaccacgaaccttacatatattatgcattgtccatatcaactgagttaaggtcacgag 29695012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 23118053 - 23118123
Alignment:
Q  155 gttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaacctaat 225  Q
    ||||||||| | ||| ||||| |||||||||||||||| |||||| ||||||||| |||||||||| ||||    
T  23118053 gttcgaaccccaaaccttacatatattatgcattgtccttatcaactgagttaagctcacgagaacataat 23118123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 8544979 - 8545056
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||||| ||||||||  || || || || |||||||||||||||| |||||| ||||||||| ||||||||||    
T  8544979 gtggtggtcggagttcgaactccggaccttgcatatattatgcattgtccttatcaactgagttaagctcacgagaac 8545056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 11637563 - 11637636
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||||||| ||||| || || || ||||||||||||| || ||| ||||||||| |||||||    
T  11637563 tggtggtcggggttcgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacgag 11637636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 37073762 - 37073823
Alignment:
Q  147 tggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    ||||||||||||||||| ||||| ||||| ||||||||||| |||| || ||||||||||||    
T  37073762 tggtcggggttcgaaccccgaaccttacatatattatgcatagtccataccaattgagttaa 37073823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 39914970 - 39914900
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||||||||||||||||| || || || || |||||||||||||||| || ||||||||||||| |||||    
T  39914970 tggtggtcggggttcgaacc-cggaccttgcatatattatgcattgtccttaccaattgagttaagctcacg 39914900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 40715939 - 40716013
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||| ||||||| ||||| || || || || |||||||||||||||| ||||||||||| |||| |||||||    
T  40715939 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccatatcaattgagctaagctcacgag 40716013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 5107236 - 5107309
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||||| || || || |||||||||||| | | || ||| ||||||||| |||||||    
T  5107236 tggtggtcggggttcgaacctcggaccttgcatatattatgcattattcataccaactgagttaagctcacgag 5107309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 41630110 - 41630167
Alignment:
Q  151 cggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    ||||||| ||| | ||||| || || ||||||||||||||||||||||||||||||||    
T  41630110 cggggtttgaatcccgaaccttgcatatattatgcattgtccctatcaattgagttaa 41630167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 4084877 - 4084941
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    |||||||||| |||| |||   |||||||| || |||||||||||||||||| ||||||||||||    
T  4084877 gagtcaggatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaaccattcattt 4084941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 18617437 - 18617501
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    |||||||||| |||| | || |||||||||||| ||||||||||||||||| |  ||||||||||    
T  18617437 gagtcaggatccgttgatatcaggtgtcaatgaattcgttgacaccaaatcatgtccattcattt 18617501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 26409323 - 26409252
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||| ||||||||||||| || || ||||| |||||||||||||||| || ||| |||| |||| |||||    
T  26409323 tggtgggcggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaagctcacg 26409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 1554116 - 1554078
Alignment:
Q  358 aggtgtcaatgagttcgttgacaccaaatcttaaccatt 396  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  1554116 aggtgtcaacgaattcgttgacaccaaatcttaaccatt 1554078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 401
Target Start/End: Original strand, 10554550 - 10554608
Alignment:
Q  343 ggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    ||||||||| |||  ||||||||| |  |||||||||||||||||| ||||||||||||    
T  10554550 ggattcgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccattcattt 10554608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 17672289 - 17672367
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||| ||| | |||||||| ||||| ||| | ||||||||||| |||| |||||| |||| |||| ||||||||||    
T  17672289 ggtggtgatcgagattcgaaccccgaaccttatatatattatgcatcgtccttatcaactgagctaagctcacgagaac 17672367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 19360531 - 19360465
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcatttc 402  Q
    ||||||||||| |||| |||  ||||||||| || |||||||||||||||| |||||| || |||||    
T  19360531 tgagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatattaaccgttgatttc 19360465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 20125096 - 20125032
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||||||| ||| ||||| ||||| || || |||||||||||||||| ||||||||||||||||    
T  20125096 gtggtggtcggagtttgaacc-cgaaccttgcatatattatgcattgtcc-tatcaattgagttaag 20125032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 22799793 - 22799759
Alignment:
Q  358 aggtgtcaatgagttcgttgacaccaaatcttaac 392  Q
    |||||||||||| ||||||||||||||||||||||    
T  22799793 aggtgtcaatgaattcgttgacaccaaatcttaac 22799759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 26655536 - 26655486
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    |||||||| ||||||||||||| || || ||||| ||||||||||||||||    
T  26655536 ggtggtggccggggttcgaaccccggaccttacatatattatgcattgtcc 26655486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 26927121 - 26927071
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    |||||||| ||||||||||||| || || ||||| ||||||||||||||||    
T  26927121 ggtggtggccggggttcgaaccccggaccttacatatattatgcattgtcc 26927071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Complemental strand, 31082775 - 31082733
Alignment:
Q  360 gtgtcaatgagttcgttgacaccaaatcttaaccattcatttc 402  Q
    |||||||||| |||||||||||||||||||||| ||| |||||    
T  31082775 gtgtcaatgaattcgttgacaccaaatcttaactattgatttc 31082733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 8682412 - 8682457
Alignment:
Q  171 ttacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||| |||||||||||||||||||  || ||||||||||||||||    
T  8682412 ttacatatattatgcattgtccctactaactgagttaaggtcacga 8682457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 17071220 - 17071277
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    ||||| ||||| |||| |||| ||||||||| || |||||||||||||||||| ||||    
T  17071220 tgagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 17071277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 19128766 - 19128823
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    ||||||||||| |||| |||  ||||||||| |  |||||||||||||||||||||||    
T  19128766 tgagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 19128823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 32200438 - 32200511
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||| | ||||| || || || || |||||||||||||||||| |||| |||| |||| |||||||    
T  32200438 tggtggtcggggcttgaaccccggaccttgcatatattatgcattgtccctgtcaactgagctaagctcacgag 32200511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 37054259 - 37054320
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgag 204  Q
    ||||||||||| ||| ||||| ||||| ||| | ||||||||||||||||||| ||| ||||    
T  37054259 gtggtggtcggagtttgaaccccgaaccttatatatattatgcattgtccctaccaactgag 37054320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 39610355 - 39610408
Alignment:
Q  167 aacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||| || |||||||||||||||| |||||| |||| |||| ||||||||||    
T  39610355 aacattgcatatattatgcattgtccatatcaactgagctaagctcacgagaac 39610408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 40027754 - 40027831
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||| |||| |||| |||| ||||  ||||| |||||||||||||||| |  ||| ||||||||| ||||||||||    
T  40027754 gtggtgatcggagttcaaaccccgaattttacatatattatgcattgtccatgccaactgagttaagctcacgagaac 40027831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 41266457 - 41266396
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgag 204  Q
    ||||||||||||||  ||||| ||||| ||||| ||||||||  |||||| |||||||||||    
T  41266457 gtggtggtcggggtgtgaaccccgaaccttacatatattatgttttgtccttatcaattgag 41266396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 3052350 - 3052298
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtcccta 195  Q
    |||||||||| |||| ||||||||||| || || ||||||| |||||||||||    
T  3052350 gtggtggtcgaggtttgaacctcgaaccttgcatatattatacattgtcccta 3052298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 5485246 - 5485178
Alignment:
Q  154 ggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaacct 222  Q
    |||| ||||| || ||||| || ||||||||||||||||||| ||| |||| |||| ||||||| ||||    
T  5485246 ggttagaaccccggacattgcatatattatgcattgtccctaccaactgagctaagctcacgaggacct 5485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 6476841 - 6476781
Alignment:
Q  341 caggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    |||||| |||| |||  ||||||||| |  |||||||||||||||||| ||||||||||||    
T  6476841 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccattcattt 6476781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 11318223 - 11318263
Alignment:
Q  180 ttatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||| ||| |||||||||||||||| ||||||||||    
T  11318223 ttatgcattatccttatcaattgagttaagctcacgagaac 11318263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 11647268 - 11647196
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    ||||||||| || |||||||| | ||| || || |||||||||||||||| || ||| ||||||||| |||||    
T  11647268 gtggtggtcaggattcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagttaagttcacg 11647196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 11720965 - 11720894
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||| ||||||| ||||| ||| | || || ||||||||||||||||||| ||| ||||||||| ||||    
T  11720965 ggtggtggccggggtttgaaccccgacc-ttgcatatattatgcattgtccctaccaactgagttaagctcac 11720894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 13864415 - 13864339
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    ||||||||||||||| ||||| || || || || |||||||| ||||| | || ||| ||||||||| |||||||||    
T  13864415 gtggtggtcggggtttgaaccccggaccttgcatatattatgtattgttcataccaactgagttaagctcacgagaa 13864339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 20074615 - 20074575
Alignment:
Q  151 cggggttcgaacctcgaacattacagatattatgcattgtc 191  Q
    ||||||||||| |||| |||||||| |||||||||||||||    
T  20074615 cggggttcgaaactcggacattacatatattatgcattgtc 20074575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 27364542 - 27364482
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccatt 396  Q
    |||| |||||| |||| |||  |||||||||||  |||||||||||||||||| |||||||    
T  27364542 tgagacaggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaaccatt 27364482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 35142138 - 35142213
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||||||||||| ||| || || |||||||||||||||| |||||| |||| |||| |||||||    
T  35142138 ggtggtggtcggggttcgaacctcaaactttgcatatattatgcattgtccatatcaactgagctaagctcacgag 35142213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 7388029 - 7388103
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||| ||| | ||||| ||||| ||||||||||||||||| | ||| ||||||||| |||||||    
T  7388029 gtggtggtcggggtttgaatcccgaaccttacatatattatgcattgtcccaaccaactgagttaagctcacgag 7388103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 21105674 - 21105603
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    ||||||||||||||||||||||||||| || || |||||||||||| ||| || ||| |||| |||| ||||    
T  21105674 gtggtggtcggggttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaagctcac 21105603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 395
Target Start/End: Complemental strand, 25343294 - 25343236
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccat 395  Q
    |||||||||| |||| |||  |||||||||||| |||||||||||||||||| ||||||    
T  25343294 gagtcaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaaccat 25343236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 42227794 - 42227844
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    |||||||||||| ||| ||||||||||| ||||| ||||||||||||||||    
T  42227794 ggtggtggtcggagtttgaacctcgaaccttacatatattatgcattgtcc 42227844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 21580859 - 21580811
Alignment:
Q  171 ttacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    ||||| |||||||||||||||| |||||||||||||||| | |||||||    
T  21580859 ttacatatattatgcattgtccatatcaattgagttaagcttacgagaa 21580811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 23221464 - 23221392
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    ||||||||| || ||| ||||| ||||| ||||| ||||||||||||||| ||| ||| ||||||||| ||||    
T  23221464 ggtggtggttggagtttgaaccacgaaccttacatatattatgcattgtctctaccaactgagttaagctcac 23221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 401
Target Start/End: Original strand, 7668480 - 7668543
Alignment:
Q  338 agtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    ||||||||| |||| |||  ||||||||| |  |||||||||||||||||| ||||||||||||    
T  7668480 agtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccattcattt 7668543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 15305296 - 15305245
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatc 387  Q
    ||||||||||| | || |||| |||||||||||| |||||||||||||||||    
T  15305296 tgagtcaggatccattgacatcaggtgtcaatgaattcgttgacaccaaatc 15305245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 26713112 - 26713154
Alignment:
Q  171 ttacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  26713112 ttacatatattatgcattgtcc-tatcaattgagttaaggtcac 26713154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 40187625 - 40187692
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||| |||||||| ||||| |  || ||||| ||||||||||||||||||| ||| |||||||||    
T  40187625 ggtggtgttcggggtttgaaccgcagaccttacatatattatgcattgtccctaccaactgagttaag 40187692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 1417626 - 1417664
Alignment:
Q  358 aggtgtcaatgagttcgttgacaccaaatcttaaccatt 396  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  1417626 aggtgtcaacgaattcgttgacaccaaatcttaaccatt 1417664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 7994873 - 7994951
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||||||||||||| ||||| |  || ||||| ||||||||  ||||||||| ||| ||||||| | ||||||||||    
T  7994873 ggtggtggtcggggtttgaaccccagaccttacatatattatgttttgtccctaccaactgagttatgctcacgagaac 7994951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 27833390 - 27833440
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    |||||||||||||||| ||||| || || ||||| ||||||||||||||||    
T  27833390 ggtggtggtcggggtttgaaccccggaccttacatatattatgcattgtcc 27833440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 38226009 - 38225971
Alignment:
Q  358 aggtgtcaatgagttcgttgacaccaaatcttaaccatt 396  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  38226009 aggtgtcaacgaattcgttgacaccaaatcttaaccatt 38225971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 39926539 - 39926601
Alignment:
Q  154 ggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    |||| ||||| |||||||| || |||||||||||||||| |||||| |||| |||| ||||||    
T  39926539 ggtttgaaccccgaacattgcatatattatgcattgtccttatcaactgagctaagctcacga 39926601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 45425525 - 45425459
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    |||||||| |||| |||||||| ||||| || || |||||||||||||||  |||||| ||||||||    
T  45425525 ggtggtggccgggattcgaaccccgaaccttgcatatattatgcattgtctttatcaactgagttaa 45425459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 48837938 - 48837872
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||| ||||||||||||| | ||| || || |||||||||||| ||| || |||||||||||||    
T  48837938 gtggtggccggggttcgaaccccaaactttgcatatattatgcattatccataccaattgagttaag 48837872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 429168 - 429245
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||||||||||| ||  | ||| || || |||||||| ||| ||| |||||| ||||||||| ||||||||||    
T  429168 gtggtggtcggggttcggactccaaaccttgcatatattatgtattatccatatcaactgagttaagctcacgagaac 429245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 7908660 - 7908615
Alignment:
Q  147 tggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    ||||||||||||||||| ||||| ||||| || |||||||||||||    
T  7908660 tggtcggggttcgaaccccgaaccttacatattttatgcattgtcc 7908615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 8903657 - 8903698
Alignment:
Q  168 acattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||||| |||| ||||||||||| ||||||||||||||||    
T  8903657 acattacatatatcatgcattgtccttatcaattgagttaag 8903698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 24099226 - 24099302
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||||||||| ||| |||| ||||| ||||| ||||||||||||||   ||||||||||| | || ||||||||||    
T  24099226 gtggtggtcggg-ttcaaaccccgaaccttacatatattatgcattgtttatatcaattgagcttagttcacgagaac 24099302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 28200375 - 28200448
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||||||| ||| ||||||||||  || || |||||||| ||||| |||| ||| ||||||||| ||||||    
T  28200375 gtggtggtcggagtttgaacctcgaattttgcatatattatgtattgttcctaccaactgagttaagctcacga 28200448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 30397140 - 30397091
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    |||||||||||||||| |||| ||||| ||||| || |||||||||||||    
T  30397140 gtggtggtcggggttcaaaccccgaaccttacatattttatgcattgtcc 30397091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 32315294 - 32315217
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||| |||||||||||  |||| || || |||||||| | ||||| |||||| ||||||||| ||||| ||||    
T  32315294 gtggtggtcagggttcgaaccctgaaccttgcatatattatgtaatgtccttatcaactgagttaagctcacgtgaac 32315217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 40273557 - 40273618
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattca 398  Q
    |||| ||||| |||| |||  |||||||||||| |||||||||||||||||| |||| ||||    
T  40273557 gagttaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaaccgttca 40273618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 8901404 - 8901368
Alignment:
Q  181 tatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||| |||||||||||||||| |||||||    
T  8901404 tatgcattgtccatatcaattgagttaagttcacgag 8901368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 18773746 - 18773802
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaa 199  Q
    ||||||||||||||| ||||| || || ||||| || ||||||||||||| ||||||    
T  18773746 gtggtggtcggggtttgaaccccggaccttacatattttatgcattgtccatatcaa 18773802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 21411579 - 21411532
Alignment:
Q  153 gggttcgaacctcgaacattacagatattatgcattgtccctatcaatt 201  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||| |||||    
T  21411579 gggttcgaacc-cgaactttacatatattatgcattgtccctaccaatt 21411532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 24225973 - 24226045
Alignment:
Q  145 ggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||| ||||||||||||| || ||||| || ||||||||||||| ||  || |||| |||| |||||||    
T  24225973 ggtggtcgaggttcgaacctcggaccttacatattttatgcattgtccatacgaactgagctaagttcacgag 24226045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 26825421 - 26825461
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  26825421 atattatgcattgtccatatcaattgaggtaagctcacgag 26825461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 34000317 - 34000261
Alignment:
Q  159 gaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    ||||| ||||| ||||| |||||||||||| ||| |||||| ||||||||| |||||    
T  34000317 gaaccccgaaccttacatatattatgcattatccttatcaactgagttaagctcacg 34000261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 42829258 - 42829298
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||||| ||||| ||| |||||||    
T  42829258 atattatgcattgtccctatcaactgagtcaagctcacgag 42829298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 44651670 - 44651598
Alignment:
Q  149 gtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaacc 221  Q
    ||||| ||| |||| |||||| || || |||||||||||||||  ||||||||||| || | |||||||||||    
T  44651670 gtcggagtttgaacttcgaaccttgcatatattatgcattgtcattatcaattgagctatgctcacgagaacc 44651598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 7464481 - 7464555
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||| ||||| || || ||||| ||||||||||||||||||| ||| ||||||||| |||||||    
T  7464481 gtggtggtcggggtttgaaccccggaccttacatatattatgcattgtccctaccaactgagttaagctcacgag 7464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 7651258 - 7651185
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||||||||| ||| ||||| ||||| ||| | ||| ||||||||||||||||||| ||||||||| |||||    
T  7651258 ggtggtggtcggcgtttgaaccccgaaccttatatatactatgcattgtccctatcaactgagttaagctcacg 7651185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 47039498 - 47039421
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||||||||| |||||||| ||||| || || |||||||||||||||| |||||  ||||||||| ||||| ||||    
T  47039498 gtggtggtcgggattcgaaccccgaactttgcatatattatgcattgtccttatcatctgagttaagctcacgggaac 47039421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 48657807 - 48657863
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaa 199  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||||||    
T  48657807 gtggtggtcggggttcgaaccccgaatcttacatatattatggattgtccctatcaa 48657863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 22462359 - 22462311
Alignment:
Q  167 aacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    ||||||||| |||||||||||||||| |||||| ||||||||| |||||    
T  22462359 aacattacatatattatgcattgtccttatcaactgagttaagctcacg 22462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 401
Target Start/End: Complemental strand, 46150784 - 46150720
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    |||||||||| |||| ||| |||||||||| |  |||||||||||||||||| ||||||| ||||    
T  46150784 gagtcaggatccgttgacactaggtgtcaacggattcgttgacaccaaatctcaaccatttattt 46150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 7827579 - 7827505
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||| |||||||  |  || ||||| |||||||||||||||| |||||| ||||||||  |||||||    
T  7827579 gtggtggtcgggtttcgaactccagaccttacatatattatgcattgtccatatcaactgagttaaactcacgag 7827505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 7829967 - 7829893
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||  ||||||| ||  || ||||| |||||||||||||||| |||||| ||||||||  |||||||    
T  7829967 gtggtggtcggatttcgaacttcagaccttacatatattatgcattgtccatatcaactgagttaaactcacgag 7829893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 25485481 - 25485523
Alignment:
Q  166 gaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    |||||||||| |||||||||||||||  |||||||||||||||    
T  25485481 gaacattacatatattatgcattgtctatatcaattgagttaa 25485523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 48209200 - 48209262
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgag 204  Q
    |||||||||||||||| |||||  |||| ||| | |||||||| |||||||||||||| ||||    
T  48209200 ggtggtggtcggggtttgaaccctgaaccttatatatattatgtattgtccctatcaactgag 48209262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 48648200 - 48648266
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcatttc 402  Q
    ||||||||||| |||| |||  ||||||||| |  ||||||||||||||||||||||| || |||||    
T  48648200 tgagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaaccgttgatttc 48648266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 52453246 - 52453300
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctat 196  Q
    |||||||| || |||| ||||||||||| || || ||||||||||||||||||||    
T  52453246 ggtggtggacgaggtttgaacctcgaactttgcatatattatgcattgtccctat 52453300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 13477054 - 13477115
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattc 397  Q
    ||||||||||| |||| |||  ||||||||| || ||| ||||||||||||| |||||||||    
T  13477054 tgagtcaggatccgttgacaccaggtgtcaacgaattcattgacaccaaatcctaaccattc 13477115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 27082773 - 27082830
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    ||||||||||| | || ||| |||||||||| || ||||||||||||||||| |||||    
T  27082773 tgagtcaggatccattgacactaggtgtcaacgaattcgttgacaccaaatcctaacc 27082830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 34899167 - 34899094
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||| ||||| || || || || |||||||||||||||||||  || |||| |||| |||||||    
T  34899167 tggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctacgaactgagctaagatcacgag 34899094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 46226077 - 46226141
Alignment:
Q  152 ggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||| || || || || ||||||||||||||||||| ||||||||||||  |||||||    
T  46226077 ggggttcgaacc-cggaccttgcatatattatgcattgtccctaccaattgagttaaactcacgag 46226141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 48764474 - 48764531
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    ||||||||||| | || |||| ||||||||| || |||||||||||||||||| ||||    
T  48764474 tgagtcaggatccattgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 48764531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 52119446 - 52119381
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||| ||||||||||||| ||||| || || |||||||||||||||| || ||| |||| ||||    
T  52119446 tggtggccggggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaag 52119381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 9251421 - 9251453
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaag 209  Q
    ||||||||||||||||||| |||||||||||||    
T  9251421 atattatgcattgtccctaccaattgagttaag 9251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 10922298 - 10922370
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    ||||| ||||||||| ||||| || |  || || ||||||||||||||||||| ||| ||||||||| |||||    
T  10922298 gtggtagtcggggtttgaaccccggatcttgcatatattatgcattgtccctaccaactgagttaagctcacg 10922370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 32753865 - 32753825
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||||| ||||| ||| |||||||    
T  32753865 atattatgcattgtccctatcaactgagtcaagctcacgag 32753825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 38130948 - 38131020
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||| ||||||| ||||| || || || || |||||||||||||||| || ||| ||||||||| ||||    
T  38130948 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcac 38131020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 43679843 - 43679811
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaag 209  Q
    |||||||||||||||| ||||||||||||||||    
T  43679843 atattatgcattgtccttatcaattgagttaag 43679811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 48507083 - 48507031
Alignment:
Q  341 caggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    |||||| |||| |||  |||||||||||| |||||||||||||||||| ||||    
T  48507083 caggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 48507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 401
Target Start/End: Complemental strand, 55373761 - 55373697
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    ||||||||||||||| |||  ||||||||| |  ||||||||||||||||   ||||||||||||    
T  55373761 gagtcaggattcgttgacaccaggtgtcaacggattcgttgacaccaaattccaaccattcattt 55373697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 31815877 - 31815953
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    ||||||||||||||| ||||| || || || || ||||||||||||||||||| ||| ||||||||| |||||||||    
T  31815877 gtggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagttaagctcacgagaa 31815953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 1238199 - 1238156
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  1238199 atattatgcattgtccctatcaattgagttaagctcacgagaac 1238156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 31397778 - 31397850
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||| ||||||||||| |||| || ||||| || |||||||||||||||| |||||||| |||| ||||    
T  31397778 ggtggtggccggggttcgaatctcggaccttacatattttatgcattgtccctaccaattgagctaagctcac 31397850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 5168568 - 5168635
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||| ||||||||| ||||| ||||| || || |||||||||||| |||||||||| |||||||||    
T  5168568 ggtggtagtcggggtttgaaccccgaaccttgcatatattatgcattatccctatcaactgagttaag 5168635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 9547398 - 9547465
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||||||||||||| ||||| | ||| || || |||||||||||||||| |||||| |||||||||    
T  9547398 ggtggtggtcggggtttgaaccccaaaccttgcatatattatgcattgtccatatcaactgagttaag 9547465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 9540328 - 9540394
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcatttc 402  Q
    |||| |||||| |||| |||  ||||||||| || |||||||||||||||||||||||||| |||||    
T  9540328 tgagacaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaaccattgatttc 9540394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 4238830 - 4238781
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    ||||||||||| ||||||||| ||||| ||||| ||||||||||||||||    
T  4238830 gtggtggtcggagttcgaaccccgaaccttacatatattatgcattgtcc 4238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 9519720 - 9519781
Alignment:
Q  159 gaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||| |||||| || || |||||||||||||||| ||||||||||| |||| ||||||||||    
T  9519720 gaacttcgaaccttgcatatattatgcattgtccatatcaattgagctaagctcacgagaac 9519781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 40967365 - 40967434
Alignment:
Q  147 tggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    |||||| |||| ||||||| ||| || || |||||||||||||||| |||||| ||||||||| ||||||    
T  40967365 tggtcgaggtttgaacctcaaaccttgcatatattatgcattgtccttatcaactgagttaagctcacga 40967434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 20565065 - 20565141
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    |||||||| |||||| ||||| || || || || ||||||||||||||||||| ||| |||| |||| |||||||||    
T  20565065 gtggtggttggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagaa 20565141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 29544699 - 29544627
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||| ||||||| ||||| || || || || ||||||||||||||||||| |||||||| |||| ||||    
T  29544699 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccctaccaattgagctaagctcac 29544627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 395
Target Start/End: Complemental strand, 9276385 - 9276326
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccat 395  Q
    ||||||||||| |||| |||  ||||||||| || |||||||||||||||||| ||||||    
T  9276385 tgagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccat 9276326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 24581007 - 24581054
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgt 190  Q
    ||||||||||||||| ||||||||||| || || ||||||||||||||    
T  24581007 gtggtggtcggggtttgaacctcgaaccttgcatatattatgcattgt 24581054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 25395431 - 25395498
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||||||||| || |||||| |||| || || |||||||||||||| |||| ||| |||||||||    
T  25395431 ggtggtggtcgggatttgaaccttgaaccttgcatatattatgcattgttcctaccaactgagttaag 25395498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 28202359 - 28202296
Alignment:
Q  152 ggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||| |||| ||| || ||||| ||||||||||||||||||||||| |||| |||| |||||    
T  28202359 ggggtttgaacttcggaccttacatatattatgcattgtccctatcaactgagctaagctcacg 28202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 36264469 - 36264540
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    ||||||||||||||| ||||| ||||| || || |||||||||||| ||| || ||||||| ||||| ||||    
T  36264469 gtggtggtcggggtttgaaccccgaactttgcatatattatgcattatccataccaattgaattaagctcac 36264540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 395
Target Start/End: Original strand, 38361064 - 38361123
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccat 395  Q
    |||| |||||| |||| |||| ||||||||| || |||||||||||||||||| ||||||    
T  38361064 tgagacaggatacgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccat 38361123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 395
Target Start/End: Original strand, 1296377 - 1296435
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccat 395  Q
    |||||||||| |||| |||  ||||||||| || |||||||||||||||||| ||||||    
T  1296377 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccat 1296435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 2257042 - 2256968
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||| ||||||||||||| |  || || || |||||||||||||||| || ||| ||||||||| |||||||    
T  2257042 gtggtggccggggttcgaaccccagaccttgcatatattatgcattgtccataccaactgagttaagctcacgag 2256968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 14735883 - 14735957
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||| ||| ||| ||||||||||| ||||| || ||||||||||||| || ||||| || |||| |||||||    
T  14735883 gtggtggccggagtttgaacctcgaaccttacatattttatgcattgtccataccaattaagctaagctcacgag 14735957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 20239380 - 20239342
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  20239380 atattatgcattatccctatcaattgagttaagctcacg 20239342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 20455962 - 20455888
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||| |||| |||||||| || || || || |||||||||||||||| || |||||||| |||| |||||||    
T  20455962 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgtccataccaattgagctaagctcacgag 20455888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 22301903 - 22301865
Alignment:
Q  358 aggtgtcaatgagttcgttgacaccaaatcttaaccatt 396  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  22301903 aggtgtcaacgaattcgttgacaccaaatcttaaccatt 22301865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 27412826 - 27412900
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||| ||||  |  || ||||| ||||||||||||||| ||| ||| ||||||||| |||||||    
T  27412826 gtggtggtcggggtttgaacaacagaccttacatatattatgcattgtctctaccaactgagttaagctcacgag 27412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 29798507 - 29798581
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||| |  || ||| | || ||||||||||||| || ||| ||||||||| |||||||    
T  29798507 gtggtggtcggggttcgaacccctgaccttaaatattttatgcattgtccataccaactgagttaagctcacgag 29798581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 29809397 - 29809331
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||| |||| |||||||| || || || || ||||||||||||||||||| ||| |||||||||    
T  29809397 gtggtggccgggattcgaaccccgtacctttcatatattatgcattgtccctaccaactgagttaag 29809331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 31837926 - 31838000
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||| |||| ||| | ||||| ||||| ||||||| |||| ||| || ||||||||||||| |||||||    
T  31837926 gtggtggtcgaggtttgaatcccgaaccttacatatattatacattatccataccaattgagttaagttcacgag 31838000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 34242859 - 34242817
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    |||||||||||||||||||||||||||| |||| ||| |||||    
T  34242859 atattatgcattgtccctatcaattgagctaagctcatgagaa 34242817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 40295456 - 40295522
Alignment:
Q  151 cggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||| ||||||||||  || || | |||||||||||| | |||||||||||||||| |||||||    
T  40295456 cggggtttgaacctcgaatcttgcatacattatgcattgttcatatcaattgagttaagttcacgag 40295522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 44026663 - 44026605
Alignment:
Q  159 gaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||| ||||| ||||| ||||||||| |||||| || ||||||||||||| |||||||    
T  44026663 gaaccccgaaccttacatatattatgcgttgtccataccaattgagttaagctcacgag 44026605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Complemental strand, 18174725 - 18174668
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    ||||| ||||| |||| |||| ||||||||| || |||||||||||||||||| ||||    
T  18174725 tgagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 18174668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 27935127 - 27935062
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    |||||||  ||||||||||||||| || || || ||||| ||||||||||||| ||| ||||||||    
T  27935127 gtggtggctggggttcgaacctcgtaccttgcatatattctgcattgtccctaccaactgagttaa 27935062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 30045524 - 30045447
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||| || |||| ||| ||||||| ||  | ||||||||||||||||||| |||||||| |||| |||| |||||    
T  30045524 gtggtggccgaggtttgaatctcgaaccttgtatatattatgcattgtccctaccaattgagctaagttcaccagaac 30045447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 30050687 - 30050610
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||| || |||| ||| ||||||| ||  | ||||||||||||||||||| |||||||| |||| |||| |||||    
T  30050687 gtggtggccgaggtttgaatctcgaaccttgtatatattatgcattgtccctaccaattgagctaagttcaccagaac 30050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 30141731 - 30141654
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||| || |||| ||| ||||||| ||  | ||||||||||||||||||| |||||||| |||| |||| |||||    
T  30141731 gtggtggccgaggtttgaatctcgaaccttgtatatattatgcattgtccctaccaattgagctaagttcaccagaac 30141654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 37320518 - 37320579
Alignment:
Q  154 ggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||||||||||||| || || |||||||||||||||  || ||| ||||||||| |||||    
T  37320518 ggttcgaacctcgaaccttgcatatattatgcattgtctttaccaactgagttaagctcacg 37320579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 39555490 - 39555426
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    |||||||||||||||||||||||  ||  |||| ||||||| |||| ||| |||||||||||||||    
T  39555490 gtggtggtcggggttcgaacctcataccatacatatattat-cattctccttatcaattgagttaa 39555426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 7302168 - 7302208
Alignment:
Q  180 ttatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||||||||||||||||| |||| |||| ||||||||||    
T  7302168 ttatgcattgtccctatcaactgagctaagttcacgagaac 7302208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 22560622 - 22560566
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    |||||||||| |||| |||| ||||||||| |  |||||||||||||||||| ||||    
T  22560622 gagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatctcaacc 22560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 27244694 - 27244654
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  27244694 atattatgcattgtccctatcaactgagctaagctcacgag 27244654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 19908763 - 19908692
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||||||||||||||||||| || || || |||||||||||||||| || ||| ||||||||| ||||    
T  19908763 gtggtggtcggggttcgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 19908692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 36479057 - 36479013
Alignment:
Q  148 ggtcggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  36479057 ggtcggggttcgaacctcgaaccttacatatattatgcattgtcc 36479013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 37930837 - 37930903
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||||||||||| |||||||  || || || |||||||||||||| |||| |||||||||||||    
T  37930837 gtggtggtcggggtttgaacctcagaccttgcatatattatgcattgtacctaccaattgagttaag 37930903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 39842018 - 39842076
Alignment:
Q  159 gaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||| ||| ||||| |||||||||||||||| |||||| ||||||||| |||||||    
T  39842018 gaacctcaaaccttacatatattatgcattgtccttatcaactgagttaagatcacgag 39842076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 42344608 - 42344682
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||  ||| |||||||| || || || ||||||| |||||| |||| |||||||||||||||||||||    
T  42344608 gtggtggtcgatgtttgaacctcggaccttgcatatattatacattgttcctaccaattgagttaaggtcacgag 42344682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 1866346 - 1866399
Alignment:
Q  342 aggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccat 395  Q
    ||||| |||| ||| ||||||||||||| |||||||||||||||||| ||||||    
T  1866346 aggatccgttgacactaggtgtcaatgaattcgttgacaccaaatctcaaccat 1866399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 6459925 - 6459990
Alignment:
Q  154 ggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    |||||||||  || || ||||| |||||||||||||||| |||||| ||||||||| |||||||||    
T  6459925 ggttcgaactccggaccttacatatattatgcattgtccatatcaactgagttaagctcacgagaa 6459990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 13276166 - 13276126
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  13276166 atattatgcattgtccctaccaattgagttaagctcacgag 13276126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 41536984 - 41536928
Alignment:
Q  152 ggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    ||||||||||| |||||| || || |||||||| ||||||| |||||||||||||||    
T  41536984 ggggttcgaacttcgaaccttgcatatattatgtattgtccttatcaattgagttaa 41536928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 51436602 - 51436670
Alignment:
Q  149 gtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||  ||||| || || |||||||||||||| | |||||| ||||||||| |||||||    
T  51436602 gtcggggttcgaactccgaaccttgcatatattatgcattgttcgtatcaactgagttaagttcacgag 51436670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 56309324 - 56309364
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  56309324 atattatgcattgtccatatcaattgagttaagctcacgag 56309364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 874516 - 874453
Alignment:
Q  157 tcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||| ||||| ||| | |||||||||||||||| |||||| | ||||||| ||||||||||    
T  874516 tcgaaccacgaaccttatatatattatgcattgtccatatcaactaagttaagttcacgagaac 874453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 14202472 - 14202543
Alignment:
Q  146 gtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||| ||||| || || ||||| |||||||||||| |||  ||||| ||||||||| |||||||    
T  14202472 gtggtcggggtttgaaccccggaccttacatatattatgcattatccaaatcaactgagttaagctcacgag 14202543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 17134162 - 17134119
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||    
T  17134162 atattatgcattgtctctaccaattgagttaagctcacgagaac 17134119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 30135211 - 30135140
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    ||||||||||||||| |||||||| |  | ||| |||||||||||| ||| |||||| ||||||||| ||||    
T  30135211 gtggtggtcggggtttgaacctcggatctgacatatattatgcattatccttatcaactgagttaagctcac 30135140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 34960147 - 34960194
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgt 190  Q
    ||||||||||||||||||||||||||  ||| | ||||||||||||||    
T  34960147 gtggtggtcggggttcgaacctcgaatcttatatatattatgcattgt 34960194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 35021460 - 35021531
Alignment:
Q  146 gtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||||| ||||| || || || ||||| ||||||| |||||| |||| |||| |||||||    
T  35021460 gtggtcggggttcgaaccccgaaccttgcatattttatgtattgtccatatcaactgagctaagctcacgag 35021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 43034331 - 43034406
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||| ||||||| |||||||  || || || |||||||||||||||| || ||| ||||||||| |||||||    
T  43034331 ggtggtggccggggtttgaacctcagaccttgcatatattatgcattgtccataccaactgagttaagctcacgag 43034406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 24664981 - 24665055
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||| || || || || |||||||||||| ||| || ||| |||| |||| |||||||    
T  24664981 gtggtggtcggggttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaagctcacgag 24665055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 29910498 - 29910460
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  29910498 atattatgcattgtccttatcaattgagttaagctcacg 29910460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 48171952 - 48171886
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||||||||||| |||||| |||| || || ||||||| ||||||| ||| ||| |||||||||    
T  48171952 gtggtggtcggggtttgaacctagaaccttgcatatattatacattgtctctaccaactgagttaag 48171886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 56096259 - 56096209
Alignment:
Q  159 gaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||| ||||| ||||| |||||||||||||||| |||||| |||||||||    
T  56096259 gaaccacgaaccttacatatattatgcattgtccttatcaactgagttaag 56096209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 35823446 - 35823374
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||||||| ||| ||||||  ||| || || ||||||||| |||||| |||||||||||||||| ||||||    
T  35823446 gtggtggtcggtgtt-gaaccttaaaccttgcatatattatgccttgtccatatcaattgagttaagttcacga 35823374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 41521024 - 41520959
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||||||| ||| |||||| |||| || || ||||||||||||||| ||| ||| |||||||||    
T  41521024 tggtggtcggagtttgaaccttgaaccttgcatatattatgcattgtctctaccaactgagttaag 41520959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 46434750 - 46434811
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgag 204  Q
    |||||| |||| ||| ||||||| ||| ||||| |||||||||||||||| |||||| ||||    
T  46434750 gtggtgatcggagtttgaacctcaaaccttacatatattatgcattgtccttatcaactgag 46434811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 49952587 - 49952632
Alignment:
Q  171 ttacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||| ||||||||||||||||  ||||||||||||||| ||||||    
T  49952587 ttacatatattatgcattgtccaaatcaattgagttaagctcacga 49952632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 54500640 - 54500563
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||| | ||| ||||| || || ||||| ||||||||||||||| ||| ||| |||| |||| ||||||||||    
T  54500640 gtggtggtcagtgtttgaaccccggaccttacatatattatgcattgtctctaccaactgagctaagctcacgagaac 54500563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 54677296 - 54677239
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaat 200  Q
    ||||||| ||| ||| ||| ||||||| ||||| |||||||||||||||| |||||||    
T  54677296 gtggtggccggagtttgaatctcgaaccttacatatattatgcattgtccatatcaat 54677239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 7371546 - 7371610
Alignment:
Q  151 cggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    ||||||||||||| || || || || |||||||| ||||||| |||||| ||||||||| |||||    
T  7371546 cggggttcgaaccccggaccttgcatatattatgtattgtccttatcaactgagttaagctcacg 7371610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 9946499 - 9946419
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaacct 222  Q
    |||||||||||||||| ||||| || || || || || ||||||||||||| || ||| |||| |||| ||||||| ||||    
T  9946499 ggtggtggtcggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgaggacct 9946419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 12712042 - 12712082
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||| ||||||| ||||||||| |||||||    
T  12712042 atattatgcattgtctctatcaaatgagttaagttcacgag 12712082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 14197449 - 14197497
Alignment:
Q  171 ttacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    ||||| ||||||||||||||||||| ||| ||||||||| | |||||||    
T  14197449 ttacatatattatgcattgtccctaccaactgagttaagcttacgagaa 14197497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 29568648 - 29568608
Alignment:
Q  152 ggggttcgaacctcgaacattacagatattatgcattgtcc 192  Q
    ||||||||||||||| || ||||| ||||||||||||||||    
T  29568648 ggggttcgaacctcggaccttacatatattatgcattgtcc 29568608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 34595935 - 34595991
Alignment:
Q  152 ggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    ||||||| |||| ||||| ||||| |||||||||||||||| || ||| ||||||||    
T  34595935 ggggttcaaaccccgaactttacatatattatgcattgtccttaccaactgagttaa 34595991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 56262480 - 56262532
Alignment:
Q  341 caggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    |||||| |||| |||  |||||||||||| |||||||||||||||||| ||||    
T  56262480 caggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 56262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 33153870 - 33153941
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||| |||||||| |||||||| || ||||| ||||||||||||||||||| ||| ||||||||| ||||    
T  33153870 gtggtgttcggggtttgaacctcggaccttacatatattatgcattgtccctaccaactgagttaagctcac 33153941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 37705193 - 37705122
Alignment:
Q  146 gtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||| ||||||||||||| |||||| || |||||||||||||||| || || |||||||||| |||||||    
T  37705193 gtggtcagggttcgaacctcaaacattgcatatattatgcattgtccataccagttgagttaagttcacgag 37705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 10293007 - 10292935
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||||||||||||  |||| ||  | ||||| ||||||||||||||||||||||| ||||||||| |||||    
T  10293007 gtggtggtcggggtttaaaccccgtcccttacatatattatgcattgtccctatcaactgagttaagctcacg 10292935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 2613790 - 2613719
Alignment:
Q  146 gtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||||| ||||| ||||| || ||||||||||||| || ||| |||| |||| |||||||    
T  2613790 gtggtcggggttcgaaccccgaaccttacatattttatgcattgtccataccaactgagctaagctcacgag 2613719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 27533315 - 27533240
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||| ||||| ||||| || || ||||||||||||||||||| ||| |||  |||| |||||||    
T  27533315 ggtggtggtcggggtttgaaccccgaaccttgcatatattatgcattgtccctaccaactgatctaagctcacgag 27533240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 3777790 - 3777712
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||||| |||| ||||||||||| ||  | ||||||| |||| ||| |||||| ||||||||| ||||||||||    
T  3777790 ggtggtggtcgaggtttgaacctcgaaccttgtatatattatacattatccatatcaactgagttaagctcacgagaac 3777712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 13401666 - 13401612
Alignment:
Q  145 ggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaa 199  Q
    ||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||||||    
T  13401666 ggtggtcggggtttgaaccccgaaccttacatatattatgcattgtctctatcaa 13401612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 14768878 - 14768800
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaa-cattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||||||||| ||||| |||| | ||||| ||||||| ||||||||||| ||| ||||| ||| ||||||||||    
T  14768878 gtggtggtcggggtttgaaccccgaaactttacatatattatacattgtccctaccaactgagtcaagctcacgagaac 14768800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 41973326 - 41973260
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||| ||||||||||||| || || || || ||||||||||||||||||| ||||| |||||||    
T  41973326 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgtccctaccaattaagttaag 41973260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 3431400 - 3431327
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||| |||||||| ||||| || |||||||||||| | |||| ||| ||||||||  |||||||    
T  3431400 tggtggtcggggtttgaacctcgtacattgcatatattatgcattcttcctaccaactgagttaaactcacgag 3431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 22388165 - 22388230
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    |||||||| || ||| ||| ||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  22388165 gtggtggttggagtttgaatctcgaacgttacatatattatgcattgtccctatcaactaagttaa 22388230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 2884472 - 2884512
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  2884472 atattatgcattgtccatatcaactgagttaaggtcacgag 2884512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 18056712 - 18056772
Alignment:
Q  149 gtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||||||||||||||  ||||| || |||||||||||||||| || ||| |||||||||    
T  18056712 gtcggggttcgaacctcacacattgcatatattatgcattgtccttaccaactgagttaag 18056772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 12212364 - 12212293
Alignment:
Q  145 ggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||||||||| ||||| || || || || |||||||||||| |||||| ||| ||||||||| ||||||    
T  12212364 ggtggtcggggtttgaaccccggacgttgcatatattatgcattatccctaccaaatgagttaagctcacga 12212293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 17139506 - 17139581
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||| ||||| || || ||  | ||||||||||||||||||| ||| |||| |||| |||||||    
T  17139506 ggtggtggtcggggtttgaaccccggaccttgaatatattatgcattgtccctaccaactgagctaagctcacgag 17139581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 30678826 - 30678877
Alignment:
Q  166 gaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||| ||||| ||||||||||||||||||| ||| ||||||||| |||||||    
T  30678826 gaaccttacatatattatgcattgtccctaccaactgagttaagctcacgag 30678877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 392
Target Start/End: Complemental strand, 50271838 - 50271783
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaac 392  Q
    |||||||||| |||| |||  |||| ||||||| ||||||||||||||||||||||    
T  50271838 gagtcaggatccgttgacaccaggtatcaatgaattcgttgacaccaaatcttaac 50271783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 21041416 - 21041338
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||  |||||||||||||| |||||| || || ||||||||||||| || ||| |||| |||  ||||||||||    
T  21041416 ggtggtggctggggttcgaacctcaaacatttcatattttatgcattgtccataccaactgaggtaaactcacgagaac 21041338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 28341217 - 28341187
Alignment:
Q  178 tattatgcattgtccctatcaattgagttaa 208  Q
    |||||||||||||||||||||||||||||||    
T  28341217 tattatgcattgtccctatcaattgagttaa 28341187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 29042608 - 29042542
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||||||||| || ||||| || |  ||||| |||||||||||| |||||| |||||||||||||    
T  29042608 gtggtggtcgggatttgaaccccggatcttacatatattatgcattatccctaccaattgagttaag 29042542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 37853191 - 37853125
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcatttc 402  Q
    ||||||||||| |||| |||| ||||||||| |  |||||||||||||||| ||| ||||| |||||    
T  37853191 tgagtcaggatccgttaacatcaggtgtcaacggattcgttgacaccaaattttagccatttatttc 37853125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 403
Target Start/End: Original strand, 4134046 - 4134091
Alignment:
Q  358 aggtgtcaatgagttcgttgacaccaaatcttaaccattcatttca 403  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||    
T  4134046 aggtgtcactggattcgttgacaccaaatcttaacctttcatttca 4134091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 15382809 - 15382886
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||| |||| ||||||||||| || || || ||||||| |||||| | |||||| ||||||||| |||| |||||    
T  15382809 gtggtggccgggtttcgaacctcggaccttgcatatattatacattgttcatatcaactgagttaagctcacaagaac 15382886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 16967184 - 16967257
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||| ||| ||| ||||||||||| || || |||||||||||||||| |||||| | || |||| ||||||    
T  16967184 gtggtggccggagtttgaacctcgaaccttgcatatattatgcattgtccatatcaactaagctaagctcacga 16967257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 17917128 - 17917189
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgag 204  Q
    ||||||||||||||| ||| | ||||| ||||| || ||||||||||||| |||||| ||||    
T  17917128 gtggtggtcggggtttgaatcccgaaccttacatattttatgcattgtccatatcaactgag 17917189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 18091237 - 18091200
Alignment:
Q  180 ttatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  18091237 ttatgcattgtccctatcaactgagttaagctcacgag 18091200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 13263571 - 13263515
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    |||||||||| |||| |||  |||||||||||  |||||||||||||||||| ||||    
T  13263571 gagtcaggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaacc 13263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 16033474 - 16033514
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||||| ||||| ||| |||||||    
T  16033474 atattatgcattgtccctatcaactgagtcaagctcacgag 16033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 18521284 - 18521244
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||| || ||||||||||||| |||||||    
T  18521284 atattatgcattgtccttaccaattgagttaagttcacgag 18521244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 25469141 - 25469085
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    |||||||||| |||| |||  ||||||||| |  |||||||||||||||||||||||    
T  25469141 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 25469085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 32433085 - 32433157
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    ||||||||||||||||||||| ||||| ||| | || ||||||||| | | |||| | ||||||||| |||||    
T  32433085 gtggtggtcggggttcgaaccccgaaccttatatattttatgcatttttcatatcgactgagttaagctcacg 32433157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 36467014 - 36467086
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    ||||||||||||| || ||||||   || || || |||||||||||||||| |||||||||| ||||| ||||    
T  36467014 ggtggtggtcgggatttgaaccttataccttgcatatattatgcattgtccatatcaattgaattaagctcac 36467086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 41974832 - 41974776
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaa 199  Q
    ||||||| ||||||| ||||||| ||| || || |||||||||||| ||||||||||    
T  41974832 gtggtggccggggtttgaacctcaaaccttgcatatattatgcattatccctatcaa 41974776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 49130217 - 49130300
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaacctaatt 226  Q
    |||||||||||||||||||| ||||||  || || || |||||||||  || || ||||||||||||| ||||||| || |||||    
T  49130217 ggtggtggtcggggttcgaa-ctcgaatcttgcatattttatgcattagccttaccaattgagttaagctcacgaggacataatt 49130300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 49222853 - 49222813
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||| |||||||| |||||||||||||||||| |||||||    
T  49222853 atattgtgcattgttcctatcaattgagttaagctcacgag 49222813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 21557503 - 21557430
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||| ||||||||||| || ||||| |||||||||||||||| ||  || ||||||||| |||||||    
T  21557503 tggtggtcgggattcgaacctcggaccttacatatattatgcattgtccatactaactgagttaagctcacgag 21557430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 23159511 - 23159441
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||||||||| ||||| ||||  || || |||||||||||||||| ||| |||||||||||| ||||    
T  23159511 tggtggtcggggtttgaaccccgaatcttgcatatattatgcattgtccatatgaattgagttaagttcac 23159441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 11709056 - 11708983
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||| |||| ||| || || || ||||||||||||||||||| ||| |||| |||| |||||||    
T  11709056 tggtggtcggggtttgaacttcggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgag 11708983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 6471583 - 6471503
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaacct 222  Q
    |||||||| ||||||| ||||| |||||||| || |||||||||||||| ||||||   ||||||||  ||||||| ||||    
T  6471583 ggtggtggccggggtttgaaccccgaacattgcatatattatgcattgttcctatcggctgagttaaactcacgaggacct 6471503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 12938917 - 12938993
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    |||||||||||||||  ||  |||||| ||  | |||||||||||||||||||||| |||||||||| | |||||||    
T  12938917 gtggtggtcggggtttaaatttcgaaccttgtatatattatgcattgtccctatcagttgagttaagtttacgagaa 12938993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 13272537 - 13272585
Alignment:
Q  168 acattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    |||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  13272537 acattacatatattatgcattgtccatatcaactgagttaagttcacga 13272585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 18959210 - 18959154
Alignment:
Q  153 gggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||| ||||||||||| || || |||||||||||| |||||| |||||||||||||    
T  18959210 gggtttgaacctcgaaccttgcatatattatgcattatccctaacaattgagttaag 18959154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 34420852 - 34420924
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    |||||||||| |||| ||||||| ||| || || || ||||||||||||| || ||||||||||||| |||||    
T  34420852 gtggtggtcgaggtttgaacctcaaaccttgcatattttatgcattgtccataccaattgagttaagctcacg 34420924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 3456833 - 3456884
Alignment:
Q  165 cgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||| ||||| |||||||||||||| | |||||||||||||||| ||||||    
T  3456833 cgaaccttacatatattatgcattgttcatatcaattgagttaagttcacga 3456884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 13357430 - 13357505
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||| || |||| |||||||| || || || |||||||||||||||| || ||| ||||||||| |||||||    
T  13357430 ggtggtggccgaggtttgaacctcgtaccttgcatatattatgcattgtccataccaactgagttaagctcacgag 13357505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 9241086 - 9241012
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||| ||||||| |||| ||| || ||||| |||||||||||||| | || ||||||| ||||| |||||||    
T  9241086 gtggtggccggggtttgaacatcggaccttacatatattatgcattgtacttaccaattgatttaagctcacgag 9241012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 16843523 - 16843585
Alignment:
Q  153 gggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacg 215  Q
    ||||||||||| ||||| || || ||||||| |||||||| ||||||| |||||||| |||||    
T  16843523 gggttcgaaccacgaaccttgcatatattatacattgtccttatcaatcgagttaagctcacg 16843585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 26654434 - 26654376
Alignment:
Q  335 ttgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    |||||||| ||| |||| |||  |||||||||||  |||||||||||||||||||||||    
T  26654434 ttgagtcaagatccgttgacaccaggtgtcaatggattcgttgacaccaaatcttaacc 26654376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 30071505 - 30071579
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    |||||||||||||||| ||||||| ||| ||  | |||||||||||||| | |||||| | ||||||| ||||||    
T  30071505 ggtggtggtcggggttagaacctcaaaccttgtatatattatgcattgttcttatcaactaagttaagttcacga 30071579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 3417354 - 3417419
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcattt 401  Q
    |||||||||||  ||| ||||  ||||| || || ||||||||||||||||||||||||| |||||    
T  3417354 tgagtcaggatctgttgacatctggtgttaacgaattcgttgacaccaaatcttaaccatccattt 3417419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 3650591 - 3650518
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||| ||||||| ||||| ||||| ||||| |||||||||||| |  ||| ||| ||||||||| ||||||    
T  3650591 gtggtggccggggtttgaaccccgaaccttacatatattatgcattttttctaccaactgagttaagctcacga 3650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 10732774 - 10732839
Alignment:
Q  152 ggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||| |||| ||  | |||||||||||||| | || ||||||||||||| |||||||    
T  10732774 ggggttcgaaccttgaaccttgtatatattatgcattgttcataccaattgagttaagctcacgag 10732839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 12133527 - 12133604
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||||||||| ||||||  | ||||| ||||| |||| ||||||||| | |||||||| ||||||| ||||| ||||    
T  12133527 gtggtggtcggagttcgattcccgaaccttacatatataatgcattgttcatatcaattcagttaagttcacgtgaac 12133604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 18422443 - 18422520
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||||| |||||| ||| | ||||| ||||| ||||||||||||||  ||||||| ||| ||||| | ||||||||    
T  18422443 gtggtggttggggtttgaatcccgaaccttacatatattatgcattgtttctatcaactgaattaagcttacgagaac 18422520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 26799254 - 26799189
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    ||||||||||||||  |||| ||||| || || || |||||||||||||||| ||| |||||||||    
T  26799254 tggtggtcggggttttaaccccgaaccttgcatattttatgcattgtccctaccaactgagttaag 26799189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 3165177 - 3165125
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatct 388  Q
    ||||||||||| |||| |||| ||||||||| |  ||||||||||||||||||    
T  3165177 tgagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatct 3165125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 8837957 - 8837917
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||||||||||  |||||||| |||||||    
T  8837957 atattatgcattgtccctatcaaccgagttaagttcacgag 8837917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 24429864 - 24429804
Alignment:
Q  149 gtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||| |||||||||| ||||| ||||| || ||||||||||||| |||||| |||| ||||    
T  24429864 gtcgtggttcgaaccccgaaccttacatattttatgcattgtccatatcaagtgagctaag 24429804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 31641509 - 31641565
Alignment:
Q  337 gagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaacc 393  Q
    |||||||||| | || |||  |||||||||||  |||||||||||||||||||||||    
T  31641509 gagtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatcttaacc 31641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 41974637 - 41974701
Alignment:
Q  336 tgagtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatcttaaccattcatt 400  Q
    ||||||||||| |||| |||  ||||||||| |  |||||||||||||||||| | |||||||||    
T  41974637 tgagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcagccattcatt 41974701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 44632175 - 44632223
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtc 191  Q
    ||||||||||||||| ||||| ||||| ||| | |||||||||||||||    
T  44632175 gtggtggtcggggtttgaaccccgaaccttatatatattatgcattgtc 44632223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 8629686 - 8629759
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    |||||||||| |||| ||||| ||||| || || |||||||||||||||| || ||||||||||||| ||||||    
T  8629686 gtggtggtcgaggtttgaaccccgaaccttgcatatattatgcattgtccataccaattgagttaagctcacga 8629759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 24623307 - 24623368
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgag 204  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||| ||||    
T  24623307 gtggtggtcggggtttgaaccccgaaccttacatatattatgcattgtccatatcaactgag 24623368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 5632206 - 5632131
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||||||||||||||||||  ||||  ||| | ||||||| |||||| |||| ||||||||||||| |||||||    
T  5632206 ggtggtggtcggggttcgaacgccgaatcttatatatattatacattgttcctaccaattgagttaagctcacgag 5632131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 32524411 - 32524486
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    ||||||| |||||| |||||  | || || || ||||||||||||||||||| ||||||||||||| |||||||||    
T  32524411 tggtggttggggtttgaaccctggactttgcatatattatgcattgtccctaccaattgagttaagctcacgagaa 32524486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 4826361 - 4826288
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||| ||| ||| ||||||||||| ||||| ||||||||||||||| ||| |||||||  |||| ||||||    
T  4826361 gtggtggccggagtttgaacctcgaaccttacatatattatgcattgtctctaccaattgaactaagttcacga 4826288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 10278525 - 10278448
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgagaa 219  Q
    ||||||||| ||||||||||| ||  |  || || |||||||||||||||| |||||||||||||||| | |||||||    
T  10278525 ggtggtggttggggttcgaacttcagatcttgcatatattatgcattgtccatatcaattgagttaagtttacgagaa 10278448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 12232172 - 12232233
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgag 204  Q
    ||||||||||||||||||||| |  ||| | || ||||||||||||||||||||||| ||||    
T  12232172 gtggtggtcggggttcgaaccccagacactgcatatattatgcattgtccctatcaactgag 12232233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 404225 - 404161
Alignment:
Q  152 ggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||||||||||| ||||| || |||||||||||||||| || ||| | ||||||| ||||||    
T  404225 ggggttcgaacctcggacattgcatatattatgcattgtccttaccaactaagttaagctcacga 404161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 28758815 - 28758867
Alignment:
Q  168 acattacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||| || ||||||||| |||||||||| |||||||||||| ||||||||||    
T  28758815 acattgcatatattatgctttgtccctattaattgagttaagctcacgagaac 28758867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 2426719 - 2426758
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  2426719 atattatgcattgtctctatcaattgagttaaggttacga 2426758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 2445371 - 2445304
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||||||||||||||||||| ||||  ||  | |||||||||||||| | |||||| |||||||||    
T  2445371 ggtggtggtcggggttcgaaccccgaatcttgtatatattatgcattgttcatatcaactgagttaag 2445304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 4553773 - 4553730
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||    
T  4553773 atattaagcattgtccgtatcaattgagttaagttcacgagaac 4553730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 15170002 - 15169955
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgt 190  Q
    ||||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  15170002 gtggtggtcggggtttgaaccccgaaccttacatatattatgcattgt 15169955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 15178774 - 15178727
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgt 190  Q
    ||||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  15178774 gtggtggtcggggtttgaaccccgaaccttacatatattatgcattgt 15178727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 19277634 - 19277571
Alignment:
Q  154 ggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||  |||| ||||  |||||||||||||| |||||||| ||||||||| |||||||    
T  19277634 ggttcgaaccctgaaccttacctatattatgcattgttcctatcaactgagttaagttcacgag 19277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 788937 - 788863
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||| ||||  ||||| || || |||||||||||||||| || ||| |||| |||| |||||||    
T  788937 gtggtggtcggggtttgaactccgaaccttgcatatattatgcattgtccttaccaactgagataagctcacgag 788863  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 29069551 - 29069481
Alignment:
Q  146 gtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacga 216  Q
    |||| ||||||| |||||||  || || || ||||||||||||||||||||||| |||| |||| ||||||    
T  29069551 gtggccggggtttgaacctcagacttttcatatattatgcattgtccctatcaactgagctaagctcacga 29069481  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 8569780 - 8569715
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    ||||||| ||||||| ||||| || || || || |||||||||||||||| || ||||||||||||    
T  8569780 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaattgagttaa 8569715  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 16390499 - 16390426
Alignment:
Q  144 tggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    |||||| || |||| ||||| || || ||||| ||||||||||||||||||| ||| |||| |||| |||||||    
T  16390499 tggtggccgaggtttgaaccccggaccttacatatattatgcattgtccctaccaactgaggtaagctcacgag 16390426  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 24212554 - 24212595
Alignment:
Q  168 acattacagatattatgcattgtccctatcaattgagttaag 209  Q
    |||||||| |||||||||||||||| |||||| |||||||||    
T  24212554 acattacatatattatgcattgtccatatcaactgagttaag 24212595  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 19311880 - 19311828
Alignment:
Q  338 agtcaggattcgtttacattaggtgtcaatgagttcgttgacaccaaatctta 390  Q
    |||||||||||||| |||  ||||||||| |  ||||||||||||||||||||    
T  19311880 agtcaggattcgttgacaccaggtgtcaacggattcgttgacaccaaatctta 19311828  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 16209 - 16151
Alignment:
Q  156 ttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||||||||| ||||| |||||||||||||||| ||| || ||||||||| ||||    
T  16209 ttcgaacctcgaactttacatatattatgcattgtccttattaaatgagttaagttcac 16151  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 161213 - 161141
Alignment:
Q  142 ggtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcac 214  Q
    |||||||||||||||| ||||| ||||| || || || ||||||||||||| || ||| ||||||||| ||||    
T  161213 ggtggtggtcggggtttgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcac 161141  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 119639 - 119566
Alignment:
Q  144 tggtggtcg-gggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||| |||||| ||| ||| ||||| || ||||||| ||||||||||||||| ||||||||| |||||||    
T  119639 tggtggtcgagggttc-aacatcggacattgcaaatattatacattgtccctatcaactgagttaagctcacgag 119566  T

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Target: scaffold1160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 1702 - 1767
Alignment:
Q  143 gtggtggtcggggttcgaacctcgaacattacagatattatgcattgtccctatcaattgagttaa 208  Q
    |||||||  ||||||| |||||||||| || || || |||||||||||||||| ||| ||||||||    
T  1702 gtggtggctggggttcaaacctcgaaccttgcatattttatgcattgtccctaccaactgagttaa 1767  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 35946 - 35995
Alignment:
Q  171 ttacagatattatgcattgtccctatcaattgagttaaggtcacgagaac 220  Q
    ||||| ||||| ||||||||||||||||| |||| |||| ||||||||||    
T  35946 ttacatatattgtgcattgtccctatcaactgagctaagctcacgagaac 35995  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 99074 - 99034
Alignment:
Q  177 atattatgcattgtccctatcaattgagttaaggtcacgag 217  Q
    ||||||||||||||||||||||| ||||| ||| |||||||    
T  99074 atattatgcattgtccctatcaactgagtcaagctcacgag 99034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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