View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18467_low_29 (Length: 359)

Name: NF18467_low_29
Description: NF18467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18467_low_29
NF18467_low_29
[»] chr8 (9 HSPs)
chr8 (19-316)||(18668979-18669271)
chr8 (163-316)||(13117759-13117913)
chr8 (234-316)||(13135567-13135649)
chr8 (240-317)||(13009786-13009863)
chr8 (235-315)||(13011028-13011108)
chr8 (240-314)||(9577687-9577761)
chr8 (19-157)||(13116182-13116314)
chr8 (240-316)||(26442007-26442083)
chr8 (247-307)||(11537262-11537322)
[»] chr7 (5 HSPs)
chr7 (241-316)||(41866260-41866335)
chr7 (240-315)||(28261753-28261828)
chr7 (240-314)||(48918555-48918629)
chr7 (247-307)||(31656835-31656895)
chr7 (247-307)||(29218221-29218281)
[»] chr5 (3 HSPs)
chr5 (241-314)||(15369476-15369549)
chr5 (241-314)||(16946302-16946375)
chr5 (247-315)||(19732067-19732135)
[»] chr2 (2 HSPs)
chr2 (235-315)||(2388802-2388882)
chr2 (247-307)||(35514112-35514171)
[»] scaffold0971 (1 HSPs)
scaffold0971 (240-315)||(1335-1410)
[»] chr6 (2 HSPs)
chr6 (241-316)||(29022863-29022938)
chr6 (23-60)||(16976267-16976304)
[»] chr4 (6 HSPs)
chr4 (240-315)||(23458688-23458763)
chr4 (239-314)||(56435055-56435130)
chr4 (240-314)||(56191433-56191507)
chr4 (241-314)||(42636393-42636466)
chr4 (247-307)||(20916804-20916863)
chr4 (247-306)||(31032755-31032813)
[»] chr1 (1 HSPs)
chr1 (241-314)||(45764995-45765068)
[»] scaffold0899 (1 HSPs)
scaffold0899 (240-314)||(2452-2526)
[»] chr3 (2 HSPs)
chr3 (247-307)||(26379277-26379336)
chr3 (247-307)||(29383688-29383747)


Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 19 - 316
Target Start/End: Complemental strand, 18669271 - 18668979
Alignment:
Q  19 attccaaagctcaaatatgttgtatatgaaagcatctctatgtttatttatcaaacaaacggtcagagaatgataaaacttgtaattctctataataatc 118  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  18669271 attccaaagctcaaatatgttgtatatgaaagcatctttatgtt-atttatcaaac----ggtcagagaatgataaaacttgtaattctctataataatc 18669177  T
Q  119 tatggataataatagaaataaatctgatgtggtagtgtgcatgatattactgaacttctatttaggcctaatttcatttttacagcgaacaaatacaaac 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18669176 tatggataataatagaaataaatcttatgtggtagtgtgcatgatattactgaacttctatttaggcctaatttcatttttacagcgaacaaatacaaac 18669077  T
Q  219 agttttaaaatttgacacaagtggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 316  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18669076 agttttaaaatttgactcaagtggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 18668979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 316
Target Start/End: Original strand, 13117759 - 13117913
Alignment:
Q  163 tattactgaacttctatttaggcctaatttcatttttacagcgaacaaatacaaacagttttaaaatt-tgacacaagtggtttcgtggtgtagttggtt 261  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| |||||   | ||| | ||| || | | ||||  |||||||||||||||||||||    
T  13117759 tattactgaacttctatttaggcctaatctcatttatacagcgaataaatatccaaagtgtaaaacttctaatacaaagggtttcgtggtgtagttggtt 13117858  T
Q  262 atcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 316  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13117859 atcacgtcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 13117913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 13135567 - 13135649
Alignment:
Q  234 cacaagtggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 316  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13135567 cacaaatggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 13135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 13009863 - 13009786
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccattg 317  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13009863 tggtttcgtggtgtagttggttattacgtcagtctaacacactgaaggtccccagttcgagcctgggcgaagccattg 13009786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 13011108 - 13011028
Alignment:
Q  235 acaagtggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccat 315  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  13011108 acaaatggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtccccagttcaaacctgggcgaagccat 13011028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 240 - 314
Target Start/End: Original strand, 9577687 - 9577761
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||    
T  9577687 tggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtccccagttcaaacctgggcgaagcca 9577761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 13116182 - 13116314
Alignment:
Q  19 attccaaagctcaaatatgttgtatatgaaagcatctctatgtttatttatcaaacaaacggtcagagaatgataaaacttgtaattctctataataatc 118  Q
    ||||||||||||||| ||| |||| || |||||||||||||||| |||||| ||||    || || | ||||||||||||||||||||||||||||| ||    
T  13116182 attccaaagctcaaa-atggtgtacattaaagcatctctatgtt-atttataaaac----ggccacataatgataaaacttgtaattctctataatattc 13116275  T
Q  119 tatggataataatagaaataaatctgatgtggtagtgtg 157  Q
    ||| |||||||||| ||||||||| ||||||||||||||    
T  13116276 tattgataataatataaataaatcggatgtggtagtgtg 13116314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 26442083 - 26442007
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 316  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || |||||||||||||    
T  26442083 tggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagccatt 26442007  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 11537262 - 11537322
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggc 307  Q
    |||||||||| |||||||||   ||||| |||||||  ||||||||||||||| |||||||    
T  11537262 gtggtgtagtcggttatcacgctagtctcacacactagaggtccccagttcgaacctgggc 11537322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 41866335 - 41866260
Alignment:
Q  241 ggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 316  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41866335 ggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 41866260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 28261828 - 28261753
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccat 315  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  28261828 tggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtccccagttctagcctgggcgaagccat 28261753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 48918629 - 48918555
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || |||||||||||    
T  48918629 tggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagcca 48918555  T

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Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 31656895 - 31656835
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggc 307  Q
    |||||||||||||||||||| | ||||| ||||||| |||||||||||||||| |||||||    
T  31656895 gtggtgtagttggttatcacgttagtctcacacactaaaggtccccagttcgaacctgggc 31656835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 29218281 - 29218221
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggc 307  Q
    ||||||||||||||||||||   ||||| |||||||  ||||||||||||||| |||||||    
T  29218281 gtggtgtagttggttatcacgctagtctcacacactagaggtccccagttcgaacctgggc 29218221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 15369476 - 15369549
Alignment:
Q  241 ggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15369476 ggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 15369549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 16946375 - 16946302
Alignment:
Q  241 ggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| | |||||||||||    
T  16946375 ggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgagtccgggcgaagcca 16946302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 19732135 - 19732067
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccat 315  Q
    |||||||||||||||||||| |||||||||||||||||||||| || |||| || | |||||| |||||    
T  19732135 gtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcaagtccgggcgacgccat 19732067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 2388802 - 2388882
Alignment:
Q  235 acaagtggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccat 315  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || ||||||||||||    
T  2388802 acaaatggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagccat 2388882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 35514112 - 35514171
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggc 307  Q
    |||||||||| ||||||||| ||||||| |||||||||||||| ||||||||| |||||||    
T  35514112 gtggtgtagt-ggttatcacgtcagtcttacacactgaaggtctccagttcgatcctgggc 35514171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0971 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 1410 - 1335
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccat 315  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || ||||||||||||    
T  1410 tggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagccat 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 29022863 - 29022938
Alignment:
Q  241 ggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccatt 316  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || |||||||||||||    
T  29022863 ggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagccatt 29022938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 16976304 - 16976267
Alignment:
Q  23 caaagctcaaatatgttgtatatgaaagcatctctatg 60  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  16976304 caaatctcaaatatgttgtatatgaaagcatctgtatg 16976267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 23458763 - 23458688
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagccat 315  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || ||||||||||||    
T  23458763 tggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagccat 23458688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 56435055 - 56435130
Alignment:
Q  239 gtggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || |||||||||||    
T  56435055 gtggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagcca 56435130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 56191507 - 56191433
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || |||||||||||    
T  56191507 tggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagcca 56191433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 42636393 - 42636466
Alignment:
Q  241 ggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || |||||||||||    
T  42636393 ggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagcca 42636466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 20916863 - 20916804
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggc 307  Q
    |||||||||| ||||||||| ||||||| |||||||||||||| ||||||||| |||||||    
T  20916863 gtggtgtagt-ggttatcacgtcagtcttacacactgaaggtctccagttcgatcctgggc 20916804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 31032755 - 31032813
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctggg 306  Q
    |||||||||| ||||||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  31032755 gtggtgtagt-ggttatcacgtcagtcttacacactgaaggtctccagttcgatcctggg 31032813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 45765068 - 45764995
Alignment:
Q  241 ggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || |||||||||||    
T  45765068 ggtttcgtggtgtagttggttatcacgtcagtctaacacactgaaggtctccggttcgaacccgggcgaagcca 45764995  T

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Target: scaffold0899 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0899
Description:

Target: scaffold0899; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 314
Target Start/End: Original strand, 2452 - 2526
Alignment:
Q  240 tggtttcgtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggcgaagcca 314  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| || || |||||||||||    
T  2452 tggtttagtggtgtagttggttatcacgtcagtctaacacactgaaggtctccagtttgaaccagggcgaagcca 2526  T

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Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 26379336 - 26379277
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggc 307  Q
    |||||||||| ||||||||| ||||||| |||||||||||||| ||||||||| |||||||    
T  26379336 gtggtgtagt-ggttatcacgtcagtcttacacactgaaggtctccagttcgatcctgggc 26379277  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 29383688 - 29383747
Alignment:
Q  247 gtggtgtagttggttatcacatcagtctaacacactgaaggtccccagttcgagcctgggc 307  Q
    |||||||||| ||||||||| ||||||| |||||||||||||| ||||||||| |||||||    
T  29383688 gtggtgtagt-ggttatcacgtcagtcttacacactgaaggtctccagttcgatcctgggc 29383747  T

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