View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18469_high_11 (Length: 297)
Name: NF18469_high_11
Description: NF18469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18469_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 25134163 - 25134449
Alignment:
| Q |
1 |
tccttagttatgtcctttgtttcttgtcgaataggttgaattaaacctcactgtaagggccttcttgcataatacaacaaaagcttactacaaatgtgcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25134163 |
tccttagttatgtcctttgtttcttgtcgaataggttgaattaaacctcactgtaagggccttcttgcataatacaacaaaagcttactacaaatgtgcc |
25134262 |
T |
|
| Q |
101 |
ctgactggtagtccatgcagtatgaatatcttctttcctcacggaagcacagctgtgttagtttctcctgctccacaacaggcaagattattattatatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25134263 |
ttgactggtagtccatgcagtatgaatatcttctttcctcacggaagcacagctgtgttagtttctcctgctccacaacaggcaagattattattatatt |
25134362 |
T |
|
| Q |
201 |
acttgcttcaagtaaattgtcatccttaaaaatcttaagtggagataattttttaatgaggcaacccagtattctggtttatctctg |
287 |
Q |
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||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25134363 |
acttgcttcaaataaattgtcatccttataaatcttaagtggagataattttttaatgaggcaacccagtattctggtttatctctg |
25134449 |
T |
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