View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18469_low_12 (Length: 289)
Name: NF18469_low_12
Description: NF18469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18469_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 272
Target Start/End: Original strand, 8067673 - 8067930
Alignment:
| Q |
16 |
atgaacaccaaactcaaattcaaatgaaattccaacattatatatagagagcaagttctagccattttttcctcagctcaagctcaagagcaatggactc |
115 |
Q |
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| T |
8067673 |
atgaacaccaaactcaaattcaaatgaaattccaacattatatatagagagcaagttctagccattttttcctcagctcaagctcaagagcaatggactc |
8067772 |
T |
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| Q |
116 |
ataacattagtagtag-aaaaatattaaaaacttgtgaatatttannnnnnnnnnnnncttaataaaatctcataatttcaatttccacggcggcacaac |
214 |
Q |
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| T |
8067773 |
ataacattagtagtagaaaaaatattaaaaacttgtgaatatttatttttttctttttcttaataaaatctcataatttcaatttccacggcggcacaac |
8067872 |
T |
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| Q |
215 |
ctacttcggccgccgtatatggcgaaaggtcggaaattaacaaccagccggagtgaac |
272 |
Q |
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| T |
8067873 |
ctacttcggccgccgtatatggcgaaaggtcggaaattaacaaccagccggagtgaac |
8067930 |
T |
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