View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18476_high_3 (Length: 256)

Name: NF18476_high_3
Description: NF18476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18476_high_3
NF18476_high_3
[»] chr5 (10 HSPs)
chr5 (1-240)||(18313157-18313396)
chr5 (4-94)||(7161663-7161753)
chr5 (4-94)||(18593584-18593674)
chr5 (4-94)||(7452930-7453020)
chr5 (6-87)||(698711-698792)
chr5 (7-87)||(5656749-5656829)
chr5 (4-87)||(34378441-34378524)
chr5 (7-94)||(18255099-18255186)
chr5 (7-57)||(29087823-29087873)
chr5 (54-94)||(41250854-41250894)
[»] chr7 (22 HSPs)
chr7 (4-94)||(47325534-47325624)
chr7 (4-94)||(31971784-31971874)
chr7 (4-94)||(5859932-5860022)
chr7 (4-94)||(44353213-44353303)
chr7 (4-94)||(10244522-10244612)
chr7 (4-87)||(6585228-6585311)
chr7 (4-87)||(43482247-43482329)
chr7 (4-94)||(25161150-25161240)
chr7 (4-94)||(33434480-33434570)
chr7 (4-93)||(3867457-3867545)
chr7 (4-87)||(3419055-3419136)
chr7 (4-87)||(34391524-34391607)
chr7 (4-87)||(42454390-42454473)
chr7 (4-92)||(11378772-11378859)
chr7 (25-92)||(37795359-37795426)
chr7 (25-92)||(37795687-37795754)
chr7 (35-94)||(40726140-40726199)
chr7 (4-58)||(38306602-38306656)
chr7 (25-87)||(35745488-35745550)
chr7 (4-80)||(3419321-3419395)
chr7 (4-87)||(48161697-48161779)
chr7 (4-93)||(41089396-41089482)
[»] chr3 (21 HSPs)
chr3 (4-94)||(2392152-2392242)
chr3 (4-94)||(2393915-2394005)
chr3 (7-87)||(21343692-21343772)
chr3 (4-87)||(47236040-47236123)
chr3 (4-94)||(19176848-19176938)
chr3 (4-94)||(45164195-45164285)
chr3 (4-87)||(40023225-40023308)
chr3 (4-87)||(50305230-50305313)
chr3 (4-94)||(31483222-31483312)
chr3 (4-94)||(34475407-34475497)
chr3 (4-87)||(50559986-50560069)
chr3 (4-65)||(30352117-30352178)
chr3 (4-87)||(23328004-23328087)
chr3 (4-87)||(45399127-45399210)
chr3 (4-94)||(4463734-4463824)
chr3 (4-86)||(9583710-9583792)
chr3 (4-94)||(17551299-17551389)
chr3 (4-82)||(43012719-43012796)
chr3 (16-92)||(37158660-37158735)
chr3 (15-87)||(53248253-53248325)
chr3 (4-87)||(25506726-25506809)
[»] scaffold0172 (1 HSPs)
scaffold0172 (4-93)||(19260-19349)
[»] chr4 (17 HSPs)
chr4 (4-94)||(7703029-7703118)
chr4 (4-94)||(35329349-35329439)
chr4 (4-87)||(46698435-46698518)
chr4 (23-87)||(30167219-30167283)
chr4 (4-87)||(2826123-2826206)
chr4 (4-94)||(27555579-27555670)
chr4 (4-94)||(4306047-4306136)
chr4 (4-87)||(35341007-35341092)
chr4 (11-87)||(9750116-9750191)
chr4 (4-87)||(30964779-30964862)
chr4 (4-94)||(8705789-8705879)
chr4 (4-78)||(20464931-20465005)
chr4 (4-87)||(31050317-31050400)
chr4 (1-55)||(49528425-49528479)
chr4 (6-87)||(36689461-36689542)
chr4 (4-87)||(52868767-52868851)
chr4 (4-93)||(11281375-11281464)
[»] chr1 (14 HSPs)
chr1 (4-94)||(30685573-30685663)
chr1 (4-94)||(46814114-46814204)
chr1 (4-94)||(6804880-6804969)
chr1 (7-87)||(40216162-40216242)
chr1 (4-87)||(24449587-24449669)
chr1 (4-94)||(7002529-7002619)
chr1 (4-94)||(31584689-31584778)
chr1 (5-87)||(41920800-41920882)
chr1 (4-87)||(27031497-27031580)
chr1 (4-94)||(14320665-14320755)
chr1 (6-94)||(5389077-5389160)
chr1 (4-94)||(24684142-24684231)
chr1 (4-65)||(5459502-5459563)
chr1 (4-87)||(24659272-24659344)
[»] chr2 (21 HSPs)
chr2 (4-87)||(5254595-5254677)
chr2 (4-87)||(14436923-14437006)
chr2 (4-94)||(39338510-39338600)
chr2 (4-94)||(10524440-10524529)
chr2 (4-85)||(387518-387599)
chr2 (7-94)||(3745686-3745773)
chr2 (4-87)||(14106179-14106261)
chr2 (9-87)||(43248883-43248961)
chr2 (4-94)||(43816096-43816186)
chr2 (7-87)||(13512495-13512575)
chr2 (6-78)||(17116553-17116625)
chr2 (11-94)||(7455601-7455683)
chr2 (4-87)||(7874618-7874702)
chr2 (17-93)||(15457817-15457893)
chr2 (4-87)||(41877208-41877291)
chr2 (26-94)||(25280964-25281032)
chr2 (4-87)||(7461018-7461100)
chr2 (4-87)||(14405541-14405623)
chr2 (9-84)||(22888552-22888626)
chr2 (28-94)||(9823695-9823761)
chr2 (4-86)||(45311461-45311543)
[»] chr8 (22 HSPs)
chr8 (4-94)||(12897925-12898015)
chr8 (4-94)||(20138768-20138858)
chr8 (4-94)||(22773963-22774053)
chr8 (4-94)||(31207011-31207101)
chr8 (4-87)||(35815900-35815983)
chr8 (6-94)||(32065934-32066022)
chr8 (4-87)||(15821033-15821115)
chr8 (4-87)||(16457131-16457214)
chr8 (4-87)||(37986511-37986594)
chr8 (4-94)||(36631165-36631254)
chr8 (35-94)||(9659475-9659534)
chr8 (4-87)||(24995051-24995134)
chr8 (4-93)||(35821597-35821685)
chr8 (4-87)||(3584079-3584163)
chr8 (7-87)||(9519851-9519931)
chr8 (7-87)||(13538330-13538410)
chr8 (7-87)||(13686064-13686144)
chr8 (4-63)||(27889188-27889247)
chr8 (4-63)||(27947846-27947905)
chr8 (4-62)||(10837918-10837976)
chr8 (54-94)||(34866309-34866349)
chr8 (7-87)||(38577442-38577522)
[»] chr6 (7 HSPs)
chr6 (4-87)||(3117836-3117919)
chr6 (4-94)||(3254299-3254389)
chr6 (4-94)||(15944341-15944431)
chr6 (10-87)||(15132496-15132573)
chr6 (4-94)||(10542173-10542262)
chr6 (4-51)||(33697789-33697836)
chr6 (46-87)||(14663438-14663478)
[»] scaffold0085 (1 HSPs)
scaffold0085 (4-87)||(48677-48760)
[»] scaffold0343 (1 HSPs)
scaffold0343 (7-87)||(6050-6130)
[»] scaffold0434 (1 HSPs)
scaffold0434 (4-63)||(2353-2412)


Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 18313396 - 18313157
Alignment:
Q  1 ttttggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgattnnnnnn 100  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |  | ||||||||||||||||||||||||||          
T  18313396 ttttggtgtaccgtctatatgcggcaccatttgcatcttgtttcatccataccttgcgtcttacaggaatgacgtttaataatatttaccgattaaaaaa 18313297  T
Q  101 nncattggaaatatttctgttgtttttgtttccgtatggggtatgatagtcaaaactggagaattatctcgatttactccaaaagattttgtgtaatctt 200  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18313296 aacattggaaatatttctgttgtttttgtttccgtatggggtatgatagtcaaaactggagaattatctcgatttactccaaaagattttgtgtaatctt 18313197  T
Q  201 tgattccttggttacaaacacctctgtgctgtgctgtgct 240  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  18313196 tgattccttggttacaaacacctctgtgttgtgctgtgct 18313157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 7161753 - 7161663
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||||||||||||||| ||| ||||| |||||||||| |||||| ||||||||||| | ||| ||||||||||||||||| ||||||    
T  7161753 tggtgtaccgtctatatgctacactatttgtatcttatttcgtccatatcttgcgtcttgtggggaagacgtttaataatatttgccgatt 7161663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 18593584 - 18593674
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| ||||||| |  ||||| |||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  18593584 tggtgtaccgtctatatgcggcaccatatttatcttgtttcgtccataccttgcatcttgcggggatgacgtttaataatatttgccgatt 18593674  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 7452930 - 7453020
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| |||||  ||  |||||||||||||||||||  |||||| |||||||||||||| ||||||    
T  7452930 tggtgtaccgtctatatgcggcaccatttgtatcttgatttgtccataccttgcgtcttgcatggatgatgtttaataatatttgccgatt 7453020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 698711 - 698792
Alignment:
Q  6 gtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||   |||| |||||||||||||||    
T  698711 gtgtaccgtctatatgcggcaccatttgtatcatatttcatccataccttacgtcttgcagagatgtcgtttaataatattt 698792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 5656829 - 5656749
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||| ||| |||||| |||||||||| | ||||||||||||||||||  |||| |||||||||||||||    
T  5656829 tgtaccgtctatatgcggcatcatttgtatcttatttcgttcataccttgcgtcttgcggtgatggcgtttaataatattt 5656749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 34378441 - 34378524
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||||  | || ||||| ||||||||||||||  |||| |||||||||||||||    
T  34378441 tggtgtaccgtctatatgcggcaccatttgtatctcgtctcgtccatgccttgcgtcttgcggagatggcgtttaataatattt 34378524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 18255186 - 18255099
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||||||||||| |||| ||||| ||||| |||| || ||||| ||| |||| || |||| |||||||| ||||||| ||||||    
T  18255186 tgtaccgtctatatgcggcactatttgtatcttgtttcgtctataccctgcatcttacggggataacgtttaacaatatttgccgatt 18255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 29087823 - 29087873
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgc 57  Q
    |||||||||||||||| |||||||||| ||||| |||| ||||||||||||    
T  29087823 tgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgc 29087873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 41250894 - 41250854
Alignment:
Q  54 ttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||| |||||||||||| |||||||||||||| ||||||    
T  41250894 ttgcgttttgcgaggatgatgtttaataatatttgccgatt 41250854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 47325624 - 47325534
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  47325624 tggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttacgaggatgacgtttaataatatttgccgatt 47325534  T

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Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 31971874 - 31971784
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  31971874 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccgatt 31971784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 5860022 - 5859932
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||| | ||||||||||| ||||||||||||||||||||| ||||||    
T  5860022 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaataatatttgccgatt 5859932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 44353303 - 44353213
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||| ||||||||| |||||||||| ||||| |||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  44353303 tggtgtaccatctatatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccgatt 44353213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 10244522 - 10244612
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||| |||||||||| |||||||||| ||||| |||| ||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  10244522 tggtgtactgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggagatggagtttaataatatttgccgatt 10244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 6585228 - 6585311
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||  |||||||||| ||||| |||| ||||| |||||| ||||||| ||||| |||||||||||||||    
T  6585228 tggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccattccttgcatcttgcggggatggcgtttaataatattt 6585311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 43482247 - 43482329
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||| ||||| |||| ||||| |||||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  43482247 tggtgtaccgtctgtatgcagcactatttgtatcttatttcgtccataccttgcgtc-tacggggatgacgtttaataatattt 43482329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 25161150 - 25161240
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||| | |||||||||||||||| |||| | ||||||||   |||| || ||||||||||||||||||||| ||||||    
T  25161150 tggtgtaccgtctatatacggcaccatttgcatcttgtttcgttcataccttaaatcttacggggatgacgtttaataatatttgccgatt 25161240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 33434570 - 33434480
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||| | | |||||||| |||||  ||| |||||||||||||| ||||| ||||| ||||||||||||||| ||||||    
T  33434570 tggtgtaccgtctatatacagaaccatttgtatcttgcttcgtccataccttgcgtattgcggggatggcgtttaataatatttgccgatt 33434480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 3867457 - 3867545
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgat 93  Q
    ||||||||||||||||||  |||||||||| ||||| |||| || ||||||| ||||||||| |||||| |||||||||||||| |||||    
T  3867457 tggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtcaataccttacgtcttgcg-ggatgaagtttaataatatttgccgat 3867545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 3419136 - 3419055
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||  || ||| | |||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  3419136 tggtgtaccgtctat--gcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattt 3419055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 34391524 - 34391607
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||| ||||||||||| |||  ||||| ||||| |||| |||||||| |||||| |||| |||||||||||||||||||||    
T  34391524 tggtgtatcgtctatatgcggcattatttgtatcttgtttcgtccataccctgcgtcctgcggggatgacgtttaataatattt 34391607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 42454473 - 42454390
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||| |||||||||| |||||||||| | ||| |||| || ||| ||||||||||||| |||||| ||||||||||||||    
T  42454473 tggtgtactgtctatatgcggcaccatttgtaccttgtttcgtctatatcttgcgtcttgcggggatgatgtttaataatattt 42454390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 11378859 - 11378772
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccga 92  Q
    ||||||||||| ||||||| ||| ||| || |||||||| | |||||||||||||||||||| || || ||||||||||||||| ||||    
T  11378859 tggtgtaccgtttatatgcggcatcatctgtatcttatt-cgtccataccttgcgtcttgcggggttggcgtttaataatatttgccga 11378772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 37795359 - 37795426
Alignment:
Q  25 caccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccga 92  Q
    ||||||||| ||||| |||| |||||||||||||||||| | ||| ||||||||||||||||| ||||    
T  37795359 caccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccga 37795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 37795687 - 37795754
Alignment:
Q  25 caccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccga 92  Q
    ||||||||| ||||| |||| |||||||||||||||||| | ||| ||||||||||||||||| ||||    
T  37795687 caccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccga 37795754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 40726199 - 40726140
Alignment:
Q  35 atcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||| |||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  40726199 atcttgtttcgtccataccttgcgtcttgcggggatgacatttaataatatttgccgatt 40726140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 38306602 - 38306656
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcg 58  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||    
T  38306602 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcg 38306656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 35745550 - 35745488
Alignment:
Q  25 caccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||| ||||| |||| |||||||||||||| || ||  ||||||||||||||||||||    
T  35745550 caccatttgtatcttgtttcgtccataccttgcgttttacggagatgacgtttaataatattt 35745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 3419395 - 3419321
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaat 80  Q
    |||||||||||||||  || ||| | |||| ||||| |||| |||||||||||||||||||| ||||| ||||||||    
T  3419395 tggtgtaccgtctat--gcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaat 3419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 48161779 - 48161697
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||| |||||||||||| |||| ||||| || || || | |||||| |||| |||||||  |||||||||||||||||||||    
T  48161779 tggtgtgccgtctatatgcggcactatttgtattttgtt-cgtccatatcttgtgtcttgcagggatgacgtttaataatattt 48161697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 41089482 - 41089396
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgat 93  Q
    ||||||||||||||||||| |||||| ||| ||||| |||| ||||||||||  |||||||   |||| | ||||||||||||| |||||    
T  41089482 tggtgtaccgtctatatgcggcacca-ttgtatcttgtttcgtccatacctt--gtcttgcagagatggcatttaataatatttgccgat 41089396  T

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Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 2392242 - 2392152
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  2392242 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccgatt 2392152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 2394005 - 2393915
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  2394005 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccgatt 2393915  T

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Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 21343692 - 21343772
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||| |||||||||| ||||| |||| ||||||||||| |||||||  |||||||||||||||||||||    
T  21343692 tgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgtgtcttgccgggatgacgtttaataatattt 21343772  T

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Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 47236040 - 47236123
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||| |||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||  ||||| |||||||||||||||    
T  47236040 tggtataccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcagggatggcgtttaataatattt 47236123  T

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Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 19176848 - 19176938
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||| | |||| ||||||| |||||||||||  | ||||||||||||||||||| ||||||    
T  19176848 tggtgtaccgtctatatgcggcaccatttgtatcatgtttcgtccatactttgcgtcttgcaggaatgacgtttaataatatttgccgatt 19176938  T

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Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 45164195 - 45164285
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||  |||||||||||| ||||||| |||| | |||||||||||||| ||||||    
T  45164195 tggtgtaccgtctatatgcggcaccatttgtatcttgtttagtccataccttgcatcttgcggggataatgtttaataatatttgccgatt 45164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 40023308 - 40023225
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| ||| |||||| ||||| |||| |||||||  ||||||||||| |||||| ||||||||||||||    
T  40023308 tggtgtaccgtctatatgcggcatcatttgtatcttgtttcgtccatacaatgcgtcttgcggggatgatgtttaataatattt 40023225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 50305313 - 50305230
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||||||  ||||||||| ||||| || | |||||||||||||||||||| | ||| |||||||||||||||    
T  50305313 tggtgtaccgtctatatgcgacaccatttgtatcttgttccgtccataccttgcgtcttgcgggaatggcgtttaataatattt 50305230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 31483222 - 31483312
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||  | |||||||||||||||| | |||||  |||||||||||||| ||||||    
T  31483222 tggtgtaccgtctatatgcagcaccatttgtatcttgttttgttcataccttgcgtcttgtggggatggtgtttaataatatttgccgatt 31483312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 34475497 - 34475407
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||| |||||||||||||  |||||||||| ||||| |||| | |||||| ||||||||||| ||||||||||||||||||| | ||||||    
T  34475497 tggtataccgtctatatggggcaccatttgtatcttgtttcgttcataccctgcgtcttgcggggatgacgtttaataatatgtgccgatt 34475407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 50559986 - 50560069
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||| ||||||||| ||| ||| | |||| ||||| |||| |||||| ||||||| |||||||||||||||||||||||||||    
T  50559986 tggtgcaccgtctatgtgcggcatcttttgtatcttgtttcgtccatatcttgcgtattgcgaggatgacgtttaataatattt 50560069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 30352178 - 30352117
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcg 65  Q
    ||||||||| ||||||||| |||||||||| ||||| |||| ||||||||||||||||||||    
T  30352178 tggtgtaccttctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcg 30352117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 23328087 - 23328004
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||| ||||||| |||||||||  ||||| |||| |||||||||||||| ||||  ||||  |||||||||||||||    
T  23328087 tggtgtaccgtatatatgcggcaccatttatatcttgtttcgtccataccttgcgtattgcagggatagcgtttaataatattt 23328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 45399127 - 45399210
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| ||||| |||| ||||| |||| | ||||||| ||||||| ||  |||| |||||||||||||||    
T  45399127 tggtgtaccgtctatatgcggcaccgtttgtatcttgtttcgttcatacctcgcgtctttcggagatgtcgtttaataatattt 45399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 4463824 - 4463734
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||| ||||||||||||| ||||||||||  | || |||| |||||  ||||||||||| | || |||||||||||||||||| ||||||    
T  4463824 tggtgcaccgtctatatgcggcaccatttgtgtgttgtttcgtccatgtcttgcgtcttgtggggttgacgtttaataatatttgccgatt 4463734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 9583792 - 9583710
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatt 86  Q
    ||||||| ||||||||||| |||||||||| ||||| |||| || |||||||| ||||| ||  |||| ||||||||||||||    
T  9583792 tggtgtatcgtctatatgcggcaccatttgtatcttgtttcgtctataccttgtgtcttacggagatggcgtttaataatatt 9583710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 17551299 - 17551389
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||| |||||||||| |||||||||| || || |||| | |||||| ||| ||||||  |||| |||||||||||||||||| ||||    
T  17551299 tggtgtacagtctatatgcggcaccatttgtattttgtttcgttcataccctgcatcttgcagggataacgtttaataatatttactgatt 17551389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 43012719 - 43012796
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataa 82  Q
    ||||||| ||||||||||| |||||||||| || || |||| | ||||||||||||||||| |||||||| ||||||||    
T  43012719 tggtgtatcgtctatatgcggcaccatttgtatattgtttcgttcataccttgcgtcttgc-aggatgacatttaataa 43012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 37158660 - 37158735
Alignment:
Q  16 tatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccga 92  Q
    ||||||| |||||||||| ||| | |||| |||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  37158660 tatatgcggcaccatttgtatcctgtttcgtccataccttgcgtcttgcggggatggcgttt-ataatatttgccga 37158735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 53248253 - 53248325
Alignment:
Q  15 ctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||  ||||||||| ||||| |||  |||||||||| || |||||| |||||||||||||||||||||    
T  53248253 ctatatgcgacaccatttgtatcttgttttgtccataccttacgccttgcggggatgacgtttaataatattt 53248325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 25506809 - 25506726
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| || || |||  |  ||| |||| |||||||| |||||| ||||||||||||||    
T  25506809 tggtgtaccgtctatatgcggcaccatttgtatattgttttgtttatatcttgggtcttgcggggatgatgtttaataatattt 25506726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 19260 - 19349
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgat 93  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  19260 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccatgcgtcttgcgaggatgacgtttaataatatttgccgat 19349  T

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Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 7703029 - 7703118
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  7703029 tggtgtaccgtctatatgcggcaccatttgtatctt-tttcatccataccttgtgtcttgcggggatgacgtttaataatatttgccgatt 7703118  T

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Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 35329349 - 35329439
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||| ||||||||| ||||| |||||| |||||||| ||||||    
T  35329349 tggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccataccttacgtcttgcggggatggcgtttactaatatttgccgatt 35329439  T

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Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 46698518 - 46698435
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||||| ||||  |||||||||||||||| |  |||||||||||||||||||||    
T  46698518 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgaccataccttgcgtctttcatggatgacgtttaataatattt 46698435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 30167283 - 30167219
Alignment:
Q  23 tgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  30167283 tgcatcatttgtatcttgtttcgtccataccttgcgtcttgcgaggatgacgtttaataatattt 30167219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 2826123 - 2826206
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||| ||||||| |||||||||| ||||| || | |||||||||||||||||||   ||||||||||||||||||||    
T  2826123 tggtgtaccgtatatatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgcagagatgacgtttaataatattt 2826206  T

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Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 27555670 - 27555579
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgc-gaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||| ||||||||| |||| ||||| ||||| |||| ||||||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  27555670 tggtgtaccatctatatgcggcacaatttgtatcttgtttcgtccataccttgcgtcttgcgggggatggcgtttaataatatttgccgatt 27555579  T

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Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 4306047 - 4306136
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||  ||||| |||| | ||||||||||||||| || ||||||| ||||||||||||| ||||||    
T  4306047 tggtgtaccgtctatatgcggcaccatttatatctt-tttcgttcataccttgcgtcttccggggatgacatttaataatatttgccgatt 4306136  T

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Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 35341092 - 35341007
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgc--gaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||  |||||||||| ||||| |||| ||||||| |||||||||||  | |||||||||||||||||||||    
T  35341092 tggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccatacattgcgtcttgcggggggatgacgtttaataatattt 35341007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 9750116 - 9750191
Alignment:
Q  11 ccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||| |||||||||| ||||| |||| |||| |||| |||||||||| |||||||||||||||||||||    
T  9750116 ccgtctatatgcggcaccatttgtatcttgtttcgtccaaacct-gcgtcttgcggggatgacgtttaataatattt 9750191  T

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Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 30964779 - 30964862
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||||||  || |||||| ||||| |||| |||||||||||||||||||  |||||  ||||||||||||||    
T  30964779 tggtgtaccgtctatatgcaacatcatttgtatcttgtttcgtccataccttgcgtcttgcagggatggtgtttaataatattt 30964862  T

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Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 8705879 - 8705789
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||| |   || ||||||||| ||||||||   ||||||||||||||||||||| ||||||    
T  8705879 tggtgtaccgtctatatgcagcaccatttgtatcctgcctcgtccatacctcgcgtcttgaagggatgacgtttaataatatttgccgatt 8705789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 20464931 - 20465005
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgttta 78  Q
    ||||||||||||||||| | |||||||||| ||||| |||| | |||||||||| ||||| ||||||||||||||    
T  20464931 tggtgtaccgtctatatacggcaccatttgtatcttgtttctttcataccttgcatcttgtgaggatgacgttta 20465005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 31050400 - 31050317
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||||||  || |||||| ||||| |||| ||||||| | || ||||||| ||| |||||||||||||||||    
T  31050400 tggtgtaccgtctatatgcgacatcatttgtatcttgtttcgtccatacatcgcatcttgcggggacgacgtttaataatattt 31050317  T

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Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49528425 - 49528479
Alignment:
Q  1 ttttggtgtaccgtctatatgctgcaccatttgcatcttatttcatccatacctt 55  Q
    |||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||    
T  49528425 ttttggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatacctt 49528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 36689542 - 36689461
Alignment:
Q  6 gtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||||   |||||||| |||||||||| ||||||||| ||||||||||  ||||   |||||||||||||    
T  36689542 gtgtaccgtctatatgcgataccatttgtatcttatttcgtccatacctcgcgtcttgcggagatggtatttaataatattt 36689461  T

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Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 52868851 - 52868767
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacg-tttaataatattt 87  Q
    |||||||||||||||| ||  ||||||||| |||||| ||| | |||||||| ||||||| || ||||||| |||||||||||||    
T  52868851 tggtgtaccgtctatacgcgacaccatttgtatcttaattcgttcataccttacgtcttgtgaagatgacgttttaataatattt 52868767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 11281464 - 11281375
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgat 93  Q
    |||| |||||||||||| | |||||||||  ||| | |||| |||||| ||||||||||| |  ||||||||| |||||||||| |||||    
T  11281464 tggtataccgtctatatacagcaccatttatatcatgtttcgtccatatcttgcgtcttgtggagatgacgttcaataatatttgccgat 11281375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 30685663 - 30685573
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||| ||||||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  30685663 tggtgtaccatctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgatt 30685573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 46814204 - 46814114
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  46814204 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttacgtcttgcgaggatggcgtttaataatatttactgatt 46814114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 6804880 - 6804969
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  6804880 tggtgtaccgtctatatgcggcaccatttgtatctt-tttcgtccataccttgcgtcttgcggggatagcgtttaataatatttaccgatt 6804969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 40216242 - 40216162
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||| |||||||||| |||||  ||| |||||| || ||||||||||||||||||||||||||||||||    
T  40216242 tgtaccgtctatatgcggcaccatttgtatcttgattcgtccatatctggcgtcttgcgaggatgacgtttaataatattt 40216162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 24449669 - 24449587
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||| ||||||| ||||| |||||||||||||||    
T  24449669 tggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccataccttgcatcttgcg-ggatggcgtttaataatattt 24449587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 7002529 - 7002619
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||| ||||||| ||||| |||| ||||| |||| |||||||||| | | ||||||||||||||||||||||||||| ||||||    
T  7002529 tggtgtaccgtttatatgcggcaccttttgtatcttgtttcgtccataccttacattttgcgaggatgacgtttaataatatttgccgatt 7002619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 31584778 - 31584689
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||| ||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||||  |||||||||||||| ||||||    
T  31584778 tggtgtatcgtctatatgcggcaccatttgtatcttgtttcgtc-ataccttgcgtcttgcgaggatggtgtttaataatatttgccgatt 31584689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 41920800 - 41920882
Alignment:
Q  5 ggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||||| |||| ||||| || ||||||| |||||||||| |||||||||  ||||||||||||||||||||    
T  41920800 ggtgtaccgtctatatgcagcacaatttgtattttatttcgtccataccttacgtcttgcggagatgacgtttaataatattt 41920882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 27031580 - 27031497
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||| ||||||| |||||||||  || || || | |||||| |||||||||||||||||||||||||||||||||||    
T  27031580 tggtgtaccgtatatatgcggcaccatttatatattgttccgtccatatcttgcgtcttgcgaggatgacgtttaataatattt 27031497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 14320665 - 14320755
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||||||||||||||  ||||||||| || |  |||  |||||||||||| ||||| | ||||||||||||||||||||| ||||||    
T  14320665 tggtgtaccgtctatatgcgacaccatttgtatttggttttgtccataccttgcatcttgtggggatgacgtttaataatatttgccgatt 14320755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 5389160 - 5389077
Alignment:
Q  6 gtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||| |||||||||||| |||||||||| |||||||||| ||||||||||||||     | ||||| ||||||||||||||| ||||||    
T  5389160 gtgtgccgtctatatgcggcaccatttgtatcttatttcgtccataccttgcgt-----ggggatggcgtttaataatattttccgatt 5389077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 24684231 - 24684142
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||  |||||||||| ||||| |||  | |||||||||| ||||||  ||||||| | ||||||||||| ||||||    
T  24684231 tggtgtaccgtctatatgtggcaccatttgtatcttgttt-gttcataccttgcatcttgcagggatgacatataataatatttgccgatt 24684142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 5459502 - 5459563
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcg 65  Q
    ||||||||||||||||||| |||||||||| || ||  ||| |||||||||||||| |||||    
T  5459502 tggtgtaccgtctatatgcggcaccatttgtatgttgcttcgtccataccttgcgtattgcg 5459563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 24659272 - 24659344
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||||| ||||           |||||||||| |||||||||||||||||||||    
T  24659272 tggtgtaccgtctatatgcggcaccatttgtatcttgtttc-----------gcgtcttgcggggatgacgtttaataatattt 24659344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 5254595 - 5254677
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  5254595 tggtgtaccgtctatatgcggcaccatttgtatct-atttcgtccataccttacgtcttgcgaggatgacgtttaataatattt 5254677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 14437006 - 14436923
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  14437006 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatattt 14436923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 39338600 - 39338510
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| ||||||| ||||||||| ||| |||| ||||||||||||||| ||||||    
T  39338600 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatacattgcgtcttacgatgatggcgtttaataatatttgccgatt 39338510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 10524440 - 10524529
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||| |||||||||||||||||||| || || |||| ||||||||||||||||||| ||| || ||||||||||||||| ||||||    
T  10524440 tggtgtaccatctatatgctgcaccatttgtatattgtttcgtccataccttgcgtcttgc-agggtggcgtttaataatatttgccgatt 10524529  T

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Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 387518 - 387599
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatat 85  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||| |||| ||||||  ||||||||||||||||||    
T  387518 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccctgcgacttgcggtgatgacgtttaataatat 387599  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 3745686 - 3745773
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||| ||||||||| |||||||||| ||||| |||| |||||||||||||||||  | ||||||| ||||||||||||| ||||||    
T  3745686 tgtaccatctatatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttatggggatgacatttaataatatttgccgatt 3745773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 14106261 - 14106179
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||  ||||| |||| || ||||| ||||||||||||||||| |||||||||||||||    
T  14106261 tggtgtaccgtctatatgcggcaccatttctatcttgtttcgtc-ataccctgcgtcttgcgaggatggcgtttaataatattt 14106179  T

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Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 43248961 - 43248883
Alignment:
Q  9 taccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||| || ||||||  ||||| |||| ||||||||||| |||||| |||||||||||||||||||||||    
T  43248961 taccgtctatatgcggcgccatttatatcttgtttcgtccataccttgtgtcttgtgaggatgacgtttaataatattt 43248883  T

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Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 43816186 - 43816096
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| ||| |||||| |  || |||| |||||||||||||| ||||| | ||||||||||||||||||| ||||||    
T  43816186 tggtgtaccgtctatatgcggcatcatttgtactttgtttcgtccataccttgcgttttgcgggaatgacgtttaataatatttgccgatt 43816096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 13512575 - 13512495
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||| ||| |||||| || || |||| ||||||| |||||||||||| | |||||||||||||||||||    
T  13512575 tgtaccgtctatatgcggcatcatttgtattttgtttcgtccatacattgcgtcttgcgggaatgacgtttaataatattt 13512495  T

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Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 17116625 - 17116553
Alignment:
Q  6 gtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgttta 78  Q
    ||||||||||||||||| ||| |||||| ||||| | || |||||||||||||||||||| ||||||||||||    
T  17116625 gtgtaccgtctatatgcggcatcatttgtatcttgtctcgtccataccttgcgtcttgcggggatgacgttta 17116553  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 7455601 - 7455683
Alignment:
Q  11 ccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||| ||| |||||||||| |||||||||| | ||||||| |||||||||| ||||||||||||||| ||||||| ||||    
T  7455601 ccgtctatttgcggcaccatttgtatcttatttcgttcatacct-gcgtcttgcggggatgacgtttaatattatttactgatt 7455683  T

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Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 7874618 - 7874702
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacg-tttaataatattt 87  Q
    ||||||||||||||||||| || ||||||| ||||| |||  || |||||||| |||||||||||||| || |||||||||||||    
T  7874618 tggtgtaccgtctatatgcggcgccatttgtatcttgttttgtctataccttgtgtcttgcgaggatggcgttttaataatattt 7874702  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 15457817 - 15457893
Alignment:
Q  17 atatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgat 93  Q
    |||||| |||||||||| ||||| |||| |||||| | ||||||||||| ||||||||||||||| ||||| |||||    
T  15457817 atatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaatattatttgccgat 15457893  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 41877291 - 41877208
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||| | | |||||||| || || |||| |||||| ||||||||||||| |||||  ||||||||||||||    
T  41877291 tggtgtaccgtctatatacggtaccatttgtatattgtttcgtccatatcttgcgtcttgcggggatggagtttaataatattt 41877208  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 25281032 - 25280964
Alignment:
Q  26 accatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||  ||||| |||| |||||||| ||||||||| | ||||||||||||||||||||| ||||||    
T  25281032 accatttatatcttgtttcgtccataccctgcgtcttgtggggatgacgtttaataatattttccgatt 25280964  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 7461018 - 7461100
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||| ||||||||||  ||||||||| || || |||| || ||||  ||||||||||| |||||||||||||||||||||    
T  7461018 tggtgtactgtctatatgcaacaccatttgtattttgtttcgtc-atactctgcgtcttgcggggatgacgtttaataatattt 7461100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 14405541 - 14405623
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| |||||  ||| | |||||||| ||||||||  | || ||||||||||||||||    
T  14405541 tggtgtaccgtctatatgcagcaccatttgtatctt-gttcgttcataccttacgtcttgcaggaataacgtttaataatattt 14405623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 22888626 - 22888552
Alignment:
Q  9 taccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataata 84  Q
    |||||||||||||  |||||||||  | ||| |||||||||||| |||||||||||| ||||||| ||||||||||    
T  22888626 taccgtctatatgtggcaccatttctaccttgtttcatccatacattgcgtcttgcg-ggatgacatttaataata 22888552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 9823695 - 9823761
Alignment:
Q  28 catttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||| ||||| |||||| ||||||||| ||||||||  |||| ||||||||||||||| ||||||    
T  9823695 catttgtatcttgtttcattcataccttgtgtcttgcggagatggcgtttaataatatttgccgatt 9823761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 45311543 - 45311461
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatt 86  Q
    |||||| |||| ||||||  |||||||||| ||||| |||| ||| | |||||| ||||||| || || ||||||||||||||    
T  45311543 tggtgttccgtatatatgtggcaccatttgtatcttgtttcgtcctttccttgcatcttgcggggttggcgtttaataatatt 45311461  T

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Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 12898015 - 12897925
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||||    
T  12898015 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatatcttgcatcttgcggggatgacgtttaataatatttgccgatt 12897925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 20138768 - 20138858
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||| ||||||||| |||||||||| ||||| |||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  20138768 tggtgtaccatctatatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccgatt 20138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 22773963 - 22774053
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||  |||| |||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  22773963 tggtgtaccgtctatatgcggcaccatttgtatctagtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccgatt 22774053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 31207101 - 31207011
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||| ||||| | |||||||||| ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31207101 tggtgtaccgtttatatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcgaggatggcgtttaataatatttgccgatt 31207011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 35815983 - 35815900
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||  |||||||||| ||||| |||| |||||||||||||| ||||||||||| |||||||||||||||    
T  35815983 tggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccataccttgcgttttgcgaggatggcgtttaataatattt 35815900  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 32066022 - 32065934
Alignment:
Q  6 gtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||| |||||||||| ||||| |||| |||||||||||| |||||||  |||| ||||||||||||||| ||||||    
T  32066022 gtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcatcttgcggtgatggcgtttaataatatttgccgatt 32065934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 15821115 - 15821033
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||| |||||||||||||| |||||||||| ||||| || | ||||||||||||||||||| ||||||||||||||||||||||    
T  15821115 tggtataccgtctatatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgc-aggatgacgtttaataatattt 15821033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 16457214 - 16457131
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||  |||||||||| ||||| |||| |||||||||| ||||||||  |||||||||||||||||||||    
T  16457214 tggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccataccttacgtcttgcagggatgacgtttaataatattt 16457131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 37986594 - 37986511
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||||| |||| ||| | |||||||||||||| ||||||| |||||||||||||    
T  37986594 tggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccgtgccttgcgtcttgcggggatgacatttaataatattt 37986511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 36631165 - 36631254
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| |||| | |||||||||||||||||  ||||| ||| ||||||||||| ||||||    
T  36631165 tggtgtaccgtctatatgcggcaccatttgtatcttgtttc-ttcataccttgcgtcttgcagggatggcgtataataatattttccgatt 36631254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 9659475 - 9659534
Alignment:
Q  35 atcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  9659475 atcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgatt 9659534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 24995134 - 24995051
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||| ||||||| || |||||||||| ||||| |||| ||||||||||||||||| || ||||| |||| ||||||||||    
T  24995134 tggtgtactgtctataagcggcaccatttgtatcttgtttcgtccataccttgcgtcttacggggatggcgttcaataatattt 24995051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 35821597 - 35821685
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgat 93  Q
    ||||||||||||||||||| ||| |||||| ||| | |||| ||||| ||||||||||||||  |||| ||||||||||||||| |||||    
T  35821597 tggtgtaccgtctatatgcggcatcatttgtatcatgtttcgtccat-ccttgcgtcttgcggagatggcgtttaataatatttgccgat 35821685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 3584079 - 3584163
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatc-ttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||| || |||| | ||||||| |||||||| | ||||| |||||||||||||||    
T  3584079 tggtgtaccgtctatatgcggcaccatttgtatctttgtttcgttcatacctcgcgtcttgtggggatggcgtttaataatattt 3584163  T

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Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 9519851 - 9519931
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||| |||||||||| |||||||||| ||||| |||| ||||||||||||||||||   |||||  ||||||||||||||    
T  9519851 tgtactgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgtagggatggtgtttaataatattt 9519931  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 13538330 - 13538410
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||| | |||||||| || || |||| |||||||||||||||||| |  |||| |||||||||||||||    
T  13538330 tgtaccgtctatatgcggtaccatttgtatattctttcgtccataccttgcgtcttgtggagatggcgtttaataatattt 13538410  T

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Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 13686144 - 13686064
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||| | |||||||| || || |||| |||||||||||||||||| |  |||| |||||||||||||||    
T  13686144 tgtaccgtctatatgcggtaccatttgtatattctttcgtccataccttgcgtcttgtggagatggcgtttaataatattt 13686064  T

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Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 27889188 - 27889247
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttg 63  Q
    |||||||| |||||||||| |||||||||| ||||| |||| || |||||||||||||||    
T  27889188 tggtgtacagtctatatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27889247  T

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Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 27947846 - 27947905
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttg 63  Q
    |||||||| |||||||||| |||||||||| ||||| |||| || |||||||||||||||    
T  27947846 tggtgtacagtctatatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27947905  T

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Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 10837976 - 10837918
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtctt 62  Q
    ||||||||||||||||||| |||| |||||||||||||||  | ||| |||||||||||    
T  10837976 tggtgtaccgtctatatgcggcacgatttgcatcttattttgttcattccttgcgtctt 10837918  T

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Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 34866349 - 34866309
Alignment:
Q  54 ttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  34866349 ttgcgtcttgcggggatgacgtttaataatatttgccgatt 34866309  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 38577522 - 38577442
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||||||||| ||| |||||| || || |||| | ||||| || | |||||||   |||||||||||||||||||    
T  38577522 tgtaccgtctatatgcggcatcatttgtatattgtttcgttcatacattacatcttgcggaaatgacgtttaataatattt 38577442  T

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Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 3117836 - 3117919
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||| |||||||||||||||||||||| |||||||||| |||||||||| ||||||||  | |||||||||||||||||||    
T  3117836 tggtgtagcgtctatatgctgcaccatttgtatcttatttcgtccataccttacgtcttgcaggaatgacgtttaataatattt 3117919  T

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Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 3254299 - 3254389
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||||  ||||||| | |||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  3254299 tggtgtactatctatatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgatt 3254389  T

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Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 15944341 - 15944431
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    |||||||||||||||||||  ||||||||| ||||| ||   ||||||||||||||||| |  ||||| ||||||||||||||| ||||||    
T  15944341 tggtgtaccgtctatatgcgacaccatttgtatcttcttctgtccataccttgcgtcttacagggatggcgtttaataatatttgccgatt 15944431  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 15132573 - 15132496
Alignment:
Q  10 accgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||| | ||| |||||| ||||| |||  |||||||||| |||||||||| |||| |||||||||||||||    
T  15132573 accgtctatatacggcatcatttgtatcttgttttgtccataccttacgtcttgcgatgatggcgtttaataatattt 15132496  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 10542173 - 10542262
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatatttaccgatt 94  Q
    ||||||| ||||||||||| ||||| |||| ||||| |||| | |||| ||||| ||||||| ||||| || |||||||||||| ||||||    
T  10542173 tggtgtatcgtctatatgcggcaccttttgtatcttgtttcgttcatatcttgcatcttgcg-ggatggcgcttaataatattttccgatt 10542262  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 33697836 - 33697789
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccata 51  Q
    ||||||||||||||||||| |||||||||| ||||| |||| ||||||    
T  33697836 tggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccata 33697789  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 14663438 - 14663478
Alignment:
Q  46 tccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  14663438 tccatacctttcgtcttgc-aggatgacgtttaataatattt 14663478  T

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Target: scaffold0085 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 48677 - 48760
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    ||||||||||||||||||| |||||||||| ||||| |||  |||||| |||| |||||||| ||| |||||| ||||||||||    
T  48677 tggtgtaccgtctatatgcggcaccatttgtatcttgtttagtccatatcttgtgtcttgcggggaggacgttgaataatattt 48760  T

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Target: scaffold0343 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 6050 - 6130
Alignment:
Q  7 tgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttgcgaggatgacgtttaataatattt 87  Q
    |||| ||||||||| | |||||||||| ||||| | || | |||| ||||||||||||| |||||||||||||||||||||    
T  6050 tgtaacgtctatatacggcaccatttgtatcttgtctcgttcatatcttgcgtcttgcggggatgacgtttaataatattt 6130  T

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Target: scaffold0434 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 2412 - 2353
Alignment:
Q  4 tggtgtaccgtctatatgctgcaccatttgcatcttatttcatccataccttgcgtcttg 63  Q
    ||||||||||||||||||| ||||||| || ||||| |||| ||||||||||||||||||    
T  2412 tggtgtaccgtctatatgcggcaccatctgtatcttgtttcgtccataccttgcgtcttg 2353  T

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