View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18481_high_26 (Length: 339)
Name: NF18481_high_26
Description: NF18481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18481_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 17 - 285
Target Start/End: Original strand, 24780539 - 24780807
Alignment:
| Q |
17 |
taaaaaacaacaaaacgcaaaattgtcgacgaccgaagaaaacgacggttcaattatttgagattacatcgaataacttaagactaatatattctcacac |
116 |
Q |
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| T |
24780539 |
taaaaaacaacaaaacgcaaaattgtcgacgactgaagaaaacgacggttcaattatttgagattacatcgaataacttaagaccaatatattctcacac |
24780638 |
T |
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| Q |
117 |
ctattttttctccaactatactatgaaatctggttaatcttttccaaaaatgtgattaatttgattggatagatgattagttaaatttacaatcaaaatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24780639 |
ctattttttctccaactatactatgaaatctggttaatcttttccaaaaatgtgattaatttgattggatagatgattagttaaatttacaatcaaaatt |
24780738 |
T |
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| Q |
217 |
atggttaattcaacttcattgttagcccaatttcatcacaataatcaacgtaatttaaactcaactcaa |
285 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
24780739 |
atggttaattcaacttcattgttagcccaaattcatcacaataatcaacgtaatttaaactcaactcaa |
24780807 |
T |
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